Rmu_sc0004856.1_g000014

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004856.1
Physical Location & Seq
Reverse (-)
46412 .. 47215
804 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004856.1_g000014.1.cds

Sequence Viewer

Length: 804 bp
atgaagaaagctgcagagttggtaatcattcctgccccaggaattgggcacatcgtgtcagcggcggagatggcaaagctcctggttgctcgagatgaccaacttttcatcacagtcctcatcatgaagctagaccttgactccaggcccatgggaatagatattacttatacaggatctgaccgtatcaacttcatcaccctcccagaggtcaacataagcacagaaggcatgagccccaacaacttcctcaagttatttgttgaaagtcacaaacctcacattaaagatacggtctccaagcacagccagtcccaatctgaggctagacttgctgggtttgttgttgacatgttctgtacgagtatgatagacgttgtcaatgaattaggggttccaacatatgtgtttttcgcatccaacgcagggtttcttgcgctcttgttccacctccaaatccttcatgatgagcataacaaggactgcaccgatttaaaggactcggatgctgagttggtgttgcccagttttaccaatacactgccggctagtgccttacctagcatgtttttagacaaggactccaccaccacattcatcaaccatgcaagaaggttcagagaaaccaacggtattttggtaaacacattcatggagctggaagcaaatgctcttcactctctttccgatggcaaaactccaccggtgtaccccataggacccatgttgaacattacgagaaatgaaaaggatgaggattcagacctggcatcagatagcaccttgaagtggcttgatgaatag

Protein Analysis

267

Amino Acids

29.58

Weight (kDa)

4.93

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 44
AciI CCGC 2 cut(s) 62, 65
AclWI GGATC 1 cut(s) 184
AdeI CACNNNGTG 1 cut(s) 55
AfaI GTAC 2 cut(s) 361, 710
AfiI CCNNNNNNNGG 6 cut(s) 38, 44, 208, 322, 426, 789
AflIII ACRYGT 1 cut(s) 351
AgeI ACCGGT 1 cut(s) 703
AgsI TTSAA 3 cut(s) 266, 730, 787
AjnI CCWGG 4 cut(s) 37, 81, 143, 765
AluBI AGCT 4 cut(s) 11, 79, 130, 658
AluI AGCT 4 cut(s) 11, 79, 130, 658
Alw26I GTCTC 1 cut(s) 301
AlwI GGATC 1 cut(s) 184
AlwNI CAGNNNCTG 1 cut(s) 179
Ama87I CYCGRG 1 cut(s) 90
AoxI GGCC 1 cut(s) 146
ApeKI GCWGC 1 cut(s) 11
AsiGI ACCGGT 1 cut(s) 703
AspLEI GCGC 1 cut(s) 439
AspS9I GGNCC 2 cut(s) 147, 719
AsuHPI GGTGA 1 cut(s) 190
AvaI CYCGRG 1 cut(s) 90
AvaII GGWCC 1 cut(s) 719
BaeGI GKGCMC 1 cut(s) 51
BaeI ACNNNNGTAYC 2 cut(s) 692, 725
BanII GRGCYC 1 cut(s) 239
BccI CCATC 2 cut(s) 64, 683
BciT130I CCWGG 4 cut(s) 39, 83, 145, 767
BcoDI GTCTC 1 cut(s) 301
BfaI CTAG 4 cut(s) 131, 327, 549, 561
BfmI CTRYAG 1 cut(s) 12
BisI GCNGC 2 cut(s) 12, 63
BlsI GCNGC 2 cut(s) 13, 64
Bme1390I CCNGG 4 cut(s) 39, 83, 145, 767
Bme18I GGWCC 1 cut(s) 719
BmeT110I CYCGRG 1 cut(s) 90
BmgT120I GGNCC 2 cut(s) 147, 719
BmiI GGNNCC 2 cut(s) 396, 721
BmrFI CCNGG 4 cut(s) 39, 83, 145, 767
BmrI ACTGGG 1 cut(s) 519
BmsI GCATC 3 cut(s) 425, 496, 779
BmuI ACTGGG 1 cut(s) 519
BpmI CTGGAG 1 cut(s) 127
BpuEI CTTGAG 1 cut(s) 236
BsaI GGTCTC 1 cut(s) 301
BsaJI CCNNGG 2 cut(s) 37, 150
BsaWI WCCGGW 1 cut(s) 703
BsaXI ACNNNNNCTCC 4 cut(s) 125, 155, 566, 596
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 44, 208, 322, 426, 789
Bse118I RCCGGY 2 cut(s) 544, 703
Bse1I ACTGG 2 cut(s) 310, 525
BseBI CCWGG 4 cut(s) 39, 83, 145, 767
BseDI CCNNGG 2 cut(s) 37, 150
BseGI GGATG 3 cut(s) 416, 511, 757
BseLI CCNNNNNNNGG 6 cut(s) 38, 44, 208, 322, 426, 789
BseMII CTCAG 2 cut(s) 312, 501
BseNI ACTGG 2 cut(s) 310, 525
BseSI GKGCMC 1 cut(s) 51
BseYI CCCAGC 1 cut(s) 335
BsgI GTGCAG 1 cut(s) 469
BshFI GGCC 1 cut(s) 148
BshTI ACCGGT 1 cut(s) 703
BsiHKCI CYCGRG 1 cut(s) 90
BsiSI CCGG 2 cut(s) 545, 704
BslFI GGGAC 1 cut(s) 298
BslI CCNNNNNNNGG 6 cut(s) 38, 44, 208, 322, 426, 789
BsmAI GTCTC 1 cut(s) 301
BsmFI GGGAC 1 cut(s) 298
BsnI GGCC 1 cut(s) 148
Bso31I GGTCTC 1 cut(s) 301
BsoBI CYCGRG 1 cut(s) 90
Bsp1286I GDGCHC 2 cut(s) 51, 239
Bsp143I GATC 1 cut(s) 176
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 2 cut(s) 62, 65
BspANI GGCC 1 cut(s) 148
BspCNI CTCAG 2 cut(s) 313, 502
BspHI TCATGA 2 cut(s) 123, 463
BspLI GGNNCC 2 cut(s) 396, 721
BspMAI CTGCAG 1 cut(s) 16
BspPI GGATC 1 cut(s) 184
BspQI GCTCTTC 1 cut(s) 678
BspTNI GGTCTC 1 cut(s) 301
BsrFI RCCGGY 2 cut(s) 544, 703
BsrI ACTGG 2 cut(s) 310, 525
BssAI RCCGGY 2 cut(s) 544, 703
BssECI CCNNGG 2 cut(s) 37, 150
BssMI GATC 1 cut(s) 176
BssT1I CCWWGG 1 cut(s) 150
Bst2UI CCWGG 4 cut(s) 39, 83, 145, 767
Bst4CI ACNGT 4 cut(s) 115, 185, 295, 632
Bst6I CTCTTC 1 cut(s) 678
BstC8I GCNNGC 1 cut(s) 546
BstDEI CTNAG 2 cut(s) 321, 510
BstDSI CCRYGG 1 cut(s) 150
BstENI CCTNNNNNAGG 2 cut(s) 36, 206
BstF5I GGATG 3 cut(s) 416, 511, 757
BstHHI GCGC 1 cut(s) 439
BstKTI GATC 1 cut(s) 179
BstMAI GTCTC 1 cut(s) 301
BstMBI GATC 1 cut(s) 176
BstMWI GCNNNNNNNGC 4 cut(s) 71, 228, 332, 422
BstNI CCWGG 4 cut(s) 39, 83, 145, 767
BstNSI RCATGY 2 cut(s) 355, 568
BstSCI CCNGG 4 cut(s) 37, 81, 143, 765
BstSFI CTRYAG 1 cut(s) 12
BstSLI GKGCMC 1 cut(s) 51
BstX2I RGATCY 1 cut(s) 176
BstXI CCANNNNNNTGG 1 cut(s) 151
BstYI RGATCY 1 cut(s) 176
BsuRI GGCC 1 cut(s) 148
BtgI CCRYGG 1 cut(s) 150
BtsCI GGATG 3 cut(s) 416, 511, 757
BtsI GCAGTG 1 cut(s) 539
BtsIMutI CAGTG 1 cut(s) 539
Cac8I GCNNGC 1 cut(s) 546
CaiI CAGNNNCTG 1 cut(s) 179
CciI TCATGA 2 cut(s) 123, 463
CfoI GCGC 1 cut(s) 439
Cfr10I RCCGGY 2 cut(s) 544, 703
Cfr13I GGNCC 2 cut(s) 147, 719
Csp6I GTAC 2 cut(s) 360, 709
CspAI ACCGGT 1 cut(s) 703
CviAII CATG 9 cut(s) 124, 151, 232, 352, 464, 565, 605, 652, 724
CviQI GTAC 2 cut(s) 360, 709
DdeI CTNAG 2 cut(s) 321, 510
DpnI GATC 1 cut(s) 178
DpnII GATC 1 cut(s) 176
DraI TTTAAA 1 cut(s) 495
DraIII CACNNNGTG 1 cut(s) 55
Eam1104I CTCTTC 1 cut(s) 678
EarI CTCTTC 1 cut(s) 678
EciI GGCGGA 1 cut(s) 80
Eco130I CCWWGG 1 cut(s) 150
Eco24I GRGCYC 1 cut(s) 239
Eco31I GGTCTC 1 cut(s) 301
Eco47I GGWCC 1 cut(s) 719
Eco88I CYCGRG 1 cut(s) 90
EcoNI CCTNNNNNAGG 2 cut(s) 36, 206
EcoO109I RGGNCCY 1 cut(s) 719
EcoRII CCWGG 4 cut(s) 37, 81, 143, 765
EcoT14I CCWWGG 1 cut(s) 150
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 1 cut(s) 150
FaeI CATG 9 cut(s) 127, 154, 235, 355, 467, 568, 608, 655, 727
FaqI GGGAC 1 cut(s) 298
FatI CATG 9 cut(s) 123, 150, 231, 351, 463, 564, 604, 651, 723
FauNDI CATATG 1 cut(s) 403
Fnu4HI GCNGC 2 cut(s) 12, 63
FokI GGATG 3 cut(s) 403, 518, 764
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 2 cut(s) 12, 63
FspBI CTAG 4 cut(s) 131, 327, 549, 561
GlaI GCGC 1 cut(s) 438
GluI GCNGC 2 cut(s) 12, 63
GsaI CCCAGC 1 cut(s) 339
GsuI CTGGAG 1 cut(s) 127
HaeIII GGCC 1 cut(s) 148
HapII CCGG 2 cut(s) 545, 704
HhaI GCGC 1 cut(s) 439
Hin1II CATG 9 cut(s) 127, 154, 235, 355, 467, 568, 608, 655, 727
Hin6I GCGC 1 cut(s) 437
HinP1I GCGC 1 cut(s) 437
HincII GTYRAC 2 cut(s) 214, 349
HindII GTYRAC 2 cut(s) 214, 349
HinfI GANTC 4 cut(s) 140, 500, 581, 758
HpaII CCGG 2 cut(s) 545, 704
HphI GGTGA 1 cut(s) 190
Hpy166II GTNNAC 4 cut(s) 214, 349, 643, 709
Hpy188I TCNGA 7 cut(s) 181, 322, 505, 620, 688, 763, 775
Hpy188III TCNNGA 3 cut(s) 92, 124, 464
Hpy8I GTNNAC 4 cut(s) 214, 349, 643, 709
HpyAV CCTTC 3 cut(s) 221, 470, 606
HpyCH4III ACNGT 4 cut(s) 115, 185, 295, 632
HpyCH4IV ACGT 1 cut(s) 375
HpyCH4V TGCA 3 cut(s) 14, 486, 608
HpyF10VI GCNNNNNNNGC 4 cut(s) 71, 228, 332, 422
HpyF3I CTNAG 2 cut(s) 321, 510
HpySE526I ACGT 1 cut(s) 375
Hsp92II CATG 9 cut(s) 127, 154, 235, 355, 467, 568, 608, 655, 727
HspAI GCGC 1 cut(s) 437
KroI GCCGGC 1 cut(s) 544
KroNI GCCGGC 1 cut(s) 546
Kzo9I GATC 1 cut(s) 176
LguI GCTCTTC 1 cut(s) 678
LmnI GCTCC 2 cut(s) 84, 655
LweI GCATC 3 cut(s) 425, 496, 779
MaeI CTAG 4 cut(s) 131, 327, 549, 561
MaeII ACGT 1 cut(s) 375
MaeIII GTNAC 1 cut(s) 269
MalI GATC 1 cut(s) 178
MboI GATC 1 cut(s) 176
MboII GAAGA 2 cut(s) 16, 665
MflI RGATCY 1 cut(s) 176
MhlI GDGCHC 2 cut(s) 51, 239
MluCI AATT 2 cut(s) 42, 386
MlyI GAGTC 3 cut(s) 134, 494, 575
MmeI TCCRAC 2 cut(s) 422, 444
MnlI CCTC 8 cut(s) 128, 202, 212, 260, 288, 316, 461, 748
MroNI GCCGGC 1 cut(s) 544
MseI TTAA 2 cut(s) 285, 494
MslI CAYNNNNRTG 1 cut(s) 650
MspA1I CMGCKG 1 cut(s) 62
MspI CCGG 2 cut(s) 545, 704
MspR9I CCNGG 4 cut(s) 39, 83, 145, 767
MvaI CCWGG 4 cut(s) 39, 83, 145, 767
MwoI GCNNNNNNNGC 4 cut(s) 71, 228, 332, 422
NaeI GCCGGC 1 cut(s) 546
NcoI CCATGG 1 cut(s) 150
NdeI CATATG 1 cut(s) 403
NdeII GATC 1 cut(s) 176
NgoMIV GCCGGC 1 cut(s) 544
NlaIII CATG 9 cut(s) 127, 154, 235, 355, 467, 568, 608, 655, 727
NlaIV GGNNCC 2 cut(s) 396, 721
NmuCI GTSAC 1 cut(s) 269
NspI RCATGY 2 cut(s) 355, 568
PaeR7I CTCGAG 1 cut(s) 90
PagI TCATGA 2 cut(s) 123, 463
PciI ACATGT 1 cut(s) 351
PciSI GCTCTTC 1 cut(s) 678
PdiI GCCGGC 1 cut(s) 546
PfeI GAWTC 1 cut(s) 758
PflFI GACNNNGTC 1 cut(s) 377
PflMI CCANNNNNTGG 1 cut(s) 44
PinAI ACCGGT 1 cut(s) 703
PkrI GCNGC 2 cut(s) 13, 64
PleI GAGTC 3 cut(s) 134, 494, 575
PpsI GAGTC 3 cut(s) 134, 494, 575
PpuMI RGGWCCY 1 cut(s) 719
PscI ACATGT 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 719
Psp6I CCWGG 4 cut(s) 37, 81, 143, 765
PspFI CCCAGC 1 cut(s) 335
PspGI CCWGG 4 cut(s) 37, 81, 143, 765
PspN4I GGNNCC 2 cut(s) 396, 721
PspPI GGNCC 2 cut(s) 147, 719
PspPPI RGGWCCY 1 cut(s) 719
PstI CTGCAG 1 cut(s) 16
PstNI CAGNNNCTG 1 cut(s) 179
PsuI RGATCY 1 cut(s) 176
PsyI GACNNNGTC 1 cut(s) 377
RsaI GTAC 2 cut(s) 361, 710
RsaNI GTAC 2 cut(s) 360, 709
RseI CAYNNNNRTG 1 cut(s) 650
SapI GCTCTTC 1 cut(s) 678
SaqAI TTAA 2 cut(s) 285, 494
SatI GCNGC 2 cut(s) 12, 63
Sau3AI GATC 1 cut(s) 176
Sau96I GGNCC 2 cut(s) 147, 719
SchI GAGTC 3 cut(s) 134, 494, 575
ScrFI CCNGG 4 cut(s) 39, 83, 145, 767
SduI GDGCHC 2 cut(s) 51, 239
SfaNI GCATC 3 cut(s) 425, 496, 779
SfcI CTRYAG 1 cut(s) 12
Sfr274I CTCGAG 1 cut(s) 90
SgrAI CRCCGGYG 1 cut(s) 703
SinI GGWCC 1 cut(s) 719
SlaI CTCGAG 1 cut(s) 90
SmiMI CAYNNNNRTG 1 cut(s) 650
SmlI CTYRAG 2 cut(s) 90, 251
SmoI CTYRAG 2 cut(s) 90, 251
Sse9I AATT 2 cut(s) 42, 386
SsiI CCGC 2 cut(s) 62, 65
SspMI CTAG 4 cut(s) 131, 327, 549, 561
StyD4I CCNGG 4 cut(s) 37, 81, 143, 765
StyI CCWWGG 1 cut(s) 150
TaaI ACNGT 4 cut(s) 115, 185, 295, 632
TaiI ACGT 1 cut(s) 378
TaqI TCGA 1 cut(s) 91
TasI AATT 2 cut(s) 42, 386
TauI GCSGC 1 cut(s) 65
TfiI GAWTC 1 cut(s) 758
Tru1I TTAA 2 cut(s) 285, 494
Tru9I TTAA 2 cut(s) 285, 494
TscAI CASTG 1 cut(s) 546
TseFI GTSAC 1 cut(s) 269
TseI GCWGC 1 cut(s) 11
Tsp45I GTSAC 1 cut(s) 269
TspDTI ATGAA 9 cut(s) 17, 97, 140, 184, 399, 452, 586, 640, 759
TspRI CASTG 1 cut(s) 546
Tth111I GACNNNGTC 1 cut(s) 377
Van91I CCANNNNNTGG 1 cut(s) 44
VpaK11BI GGWCC 1 cut(s) 719
XagI CCTNNNNNAGG 2 cut(s) 36, 206
XceI RCATGY 2 cut(s) 355, 568
XcmI CCANNNNNNNNNTGG 1 cut(s) 634
XhoI CTCGAG 1 cut(s) 90
XspI CTAG 4 cut(s) 131, 327, 549, 561
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.