Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

11019417 .. 11020832

Gene Structure 1416 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1140700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGAAGAGACCAGCACAACTAGTGTTCGTTCCCGCCCCAGGCATCGGCCACATCGTATCAACGGTCGAGATGGCAAAGCAACTCGCTGCTCGGGACGACCAACTGTTTATCACAGTCCTCGTCATGAAGCTTCCCTACGCCCAACCATTCACCAACACTGATTCTTCAATCTCTCACCGCATCAACTTCGTCAACCTCCCCGAAGCCCAACCGGACAAACAAGACATTGTCCCCAATCCCGGGTCCTTCTTCAGAATGTTCGTCGAAAATCACAAATCTCACGTCAGAGACGCCGTTATCAACGTACTCCCCGAGTCAGATCAGTCTGAGTCGACGTCGAAGCCTCGGCTTGCCGGGTTCGTGCTCGACATGTTTTCCGCAAGCCTAATTGACGTGGCCAACGAATTTAAGGTTCCCTCCTACCTGTTCTTCACCTCCAACGCTTCGGCTCTTGCACTTATGTCCCATTTTCAATCGCTTCGTGACGAGGGGGGCATAGATATAACTGAGTTGACGAGCTCAACCGCTGAGTTGGCCGTCCCGAGTTTCATCAACCCTTACCCTGCCGCAGTCTTGCCTGGTTCGCTTCTGGACATGGAGAGCACCAAATCAACCCTCAACCACGTCAGCAAGTATAAACAAACCAAGGGCATTTTGGTAAATACATTCATGGAGCTAGAATCGCATGCTCTTCATTATCTTGATTCTGGTGATAAAATCCCACCCGTGTATCCAGTGGGACCCTTATTGAACCTCAAAAGTAGTGATGAAGATAAGGCCTCGGATATCTTGAGGTGGCTTGATGATCAGCCTCCTTTCTCGGTCGTGTTCCTGTGTTTTGGAAGCATGGGAAGTTTCGGTGAGGCCCAGGTGAAAGAGATAGCGTGCGCGCTAGAGCACAGCGGACATCGGTTTTTGTGGTCCCTTCGCCGGCCCCCACCTCAAGGCAAGAGAGCTATGCCAAGCGACTACGAGGATCTAAAGACAGTCTTGCCCGAAGGGTTTCTTGATCGGACGGCTACGGTTGGGAAGGTGATTGGTTGGGCCCCGCAAGCGGCCATCCTAGGCCATCCGGCAACCGGAGGGTTTGTATCACATTGCGGGTGGAATTCTACGTTGGAAAGTTTATGGAATGGCGTGCCGATTGCCGCATGGCCATTGTACGCGGAGCAAAACCTGAATGCCTTTCAATTGGTGGTGGAGTTGGGATTGGCAGTGGAGATTAAGATGGATTATCGGAGGGACAGCGACGTGGTGGTGAGCGCAGAAGACATAGAAAGAGGGATAAGGCGAGTGATGGAGCTTGACAGTGATGTAAGGAAAAGAGTGAAGGAGATGAGTGAAAAGAGCAAGAAAGCCTTGGTGGATGGTGGTTCTTCTTACTCTTCATTAGGGCGTTTTATTGATAAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

472

Amino Acids

52.0

Weight (kDa)

5.6

Isoelectric Point (pI)

51.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	275 - 418	7.8e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	338
AccI	GTMKAC	1 cut(s)	332
AccII	CGCG	2 cut(s)	890, 1166
AclWI	GGATC	1 cut(s)	984
AcoI	YGGCCR	5 cut(s)	46, 396, 534, 1056, 1154
AcsI	RAATTY	3 cut(s)	404, 1108, 1410
AcuI	CTGAAG	1 cut(s)	235
AcyI	GRCGYC	2 cut(s)	291, 335
AfaI	GTAC	2 cut(s)	306, 1163
AfiI	CCNNNNNNNGG	8 cut(s)	38, 44, 239, 240, 930, 944, 1054, 1079
AflIII	ACRYGT	1 cut(s)	369
AgsI	TTSAA	4 cut(s)	168, 473, 751, 1190
AhlI	ACTAGT	1 cut(s)	19
AjiI	CACGTC	4 cut(s)	283, 394, 625, 1252
AjnI	CCWGG	3 cut(s)	37, 577, 867
AjuI	GAANNNNNNNTTGG	2 cut(s)	1100, 1132
AluBI	AGCT	5 cut(s)	130, 519, 676, 956, 1303
AluI	AGCT	5 cut(s)	130, 519, 676, 956, 1303
Alw21I	GWGCWC	4 cut(s)	366, 521, 605, 900
Alw26I	GTCTC	1 cut(s)	282
AlwI	GGATC	1 cut(s)	984
Ama87I	CYCGRG	4 cut(s)	90, 239, 311, 541
ApaI	GGGCCC	1 cut(s)	1048
ApeKI	GCWGC	1 cut(s)	86
ApoI	RAATTY	3 cut(s)	404, 1108, 1410
ArsI	GACNNNNNNTTYG	2 cut(s)	267, 299
Asp700I	GAANNNNTTC	1 cut(s)	1002
AspA2I	CCTAGG	1 cut(s)	1063
AspLEI	GCGC	3 cut(s)	890, 892, 1265
AspS9I	GGNCC	7 cut(s)	243, 740, 865, 921, 933, 1044, 1045
AsuC2I	CCSGG	3 cut(s)	240, 241, 355
AsuHPI	GGTGA	8 cut(s)	142, 167, 424, 722, 872, 883, 1045, 1270
AvaI	CYCGRG	4 cut(s)	90, 239, 311, 541
AvaII	GGWCC	3 cut(s)	243, 740, 921
AvrII	CCTAGG	1 cut(s)	1063
BaeGI	GKGCMC	1 cut(s)	1048
BaeI	ACNNNNGTAYC	2 cut(s)	713, 746
BalI	TGGCCA	2 cut(s)	398, 1156
BanII	GRGCYC	2 cut(s)	521, 1048
BarI	GAAGNNNNNNTAC	2 cut(s)	119, 151
BbsI	GAAGAC	1 cut(s)	1275
Bbv12I	GWGCWC	4 cut(s)	366, 521, 605, 900
BbvI	GCAGC	1 cut(s)	73
BccI	CCATC	6 cut(s)	64, 1067, 1077, 1222, 1291, 1361
BceAI	ACGGC	3 cut(s)	278, 521, 1032
BcgI	CGANNNNNNTGC	2 cut(s)	169, 203
BciT130I	CCWGG	3 cut(s)	39, 579, 869
BciVI	GTATCC	1 cut(s)	741
BclI	TGATCA	1 cut(s)	805
BcnI	CCSGG	3 cut(s)	240, 241, 355
BcoDI	GTCTC	1 cut(s)	282
BcuI	ACTAGT	1 cut(s)	19
BfaI	CTAG	4 cut(s)	20, 677, 893, 1064
BfuI	GTATCC	1 cut(s)	741
BisI	GCNGC	4 cut(s)	87, 567, 1056, 1149
BlnI	CCTAGG	1 cut(s)	1063
BlsI	GCNGC	4 cut(s)	88, 568, 1057, 1150
Bme1390I	CCNGG	6 cut(s)	39, 240, 241, 355, 579, 869
Bme18I	GGWCC	3 cut(s)	243, 740, 921
BmeT110I	CYCGRG	4 cut(s)	90, 239, 311, 541
BmgBI	CACGTC	4 cut(s)	283, 394, 625, 1252
BmgT120I	GGNCC	7 cut(s)	243, 740, 865, 921, 933, 1044, 1045
BmiI	GGNNCC	8 cut(s)	244, 414, 741, 742, 923, 935, 1046, 1047
BmrFI	CCNGG	6 cut(s)	39, 240, 241, 355, 579, 869
BmsI	GCATC	2 cut(s)	51, 189
BpiI	GAAGAC	1 cut(s)	1275
BpuEI	CTTGAG	2 cut(s)	811, 927
BpuMI	CCSGG	3 cut(s)	240, 241, 355
BsaHI	GRCGYC	2 cut(s)	291, 335
BsaJI	CCNNGG	8 cut(s)	37, 239, 344, 645, 780, 867, 1063, 1359
BsaWI	WCCGGW	2 cut(s)	211, 1079
BsaXI	ACNNNNNCTCC	2 cut(s)	1074, 1104
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 44, 239, 240, 930, 944, 1054, 1079
Bse118I	RCCGGY	1 cut(s)	930
Bse1I	ACTGG	1 cut(s)	734
Bse3DI	GCAATG	1 cut(s)	1096
BseBI	CCWGG	3 cut(s)	39, 579, 869
BseDI	CCNNGG	8 cut(s)	37, 239, 344, 645, 780, 867, 1063, 1359
BseGI	GGATG	3 cut(s)	1059, 1069, 1372
BseLI	CCNNNNNNNGG	8 cut(s)	38, 44, 239, 240, 930, 944, 1054, 1079
BseMI	GCAATG	1 cut(s)	1096
BseMII	CTCAG	3 cut(s)	318, 498, 519
BseNI	ACTGG	1 cut(s)	734
BsePI	GCGCGC	1 cut(s)	888
BseSI	GKGCMC	1 cut(s)	1048
BseXI	GCAGC	1 cut(s)	73
Bsh1236I	CGCG	2 cut(s)	890, 1166
Bsh1285I	CGRYCG	2 cut(s)	66, 825
BsiEI	CGRYCG	2 cut(s)	66, 825
BsiHKAI	GWGCWC	4 cut(s)	366, 521, 605, 900
BsiHKCI	CYCGRG	4 cut(s)	90, 239, 311, 541
BsiSI	CCGG	6 cut(s)	212, 240, 354, 931, 1073, 1080
BslFI	GGGAC	7 cut(s)	107, 215, 448, 524, 753, 907, 1256
BslI	CCNNNNNNNGG	8 cut(s)	38, 44, 239, 240, 930, 944, 1054, 1079
BsmAI	GTCTC	1 cut(s)	282
BsmBI	CGTCTC	1 cut(s)	282
BsmFI	GGGAC	7 cut(s)	107, 215, 448, 524, 753, 907, 1256
BsmI	GAATGC	1 cut(s)	1186
BsoBI	CYCGRG	4 cut(s)	90, 239, 311, 541
Bsp120I	GGGCCC	1 cut(s)	1044
Bsp1286I	GDGCHC	5 cut(s)	366, 521, 605, 900, 1048
Bsp143I	GATC	4 cut(s)	319, 805, 976, 1009
BspCNI	CTCAG	3 cut(s)	319, 499, 520
BspFNI	CGCG	2 cut(s)	890, 1166
BspHI	TCATGA	1 cut(s)	123
BspLI	GGNNCC	8 cut(s)	244, 414, 741, 742, 923, 935, 1046, 1047
BspPI	GGATC	1 cut(s)	984
BspQI	GCTCTTC	1 cut(s)	696
BsrDI	GCAATG	1 cut(s)	1096
BsrFI	RCCGGY	1 cut(s)	930
BsrI	ACTGG	1 cut(s)	734
BssAI	RCCGGY	1 cut(s)	930
BssECI	CCNNGG	8 cut(s)	37, 239, 344, 645, 780, 867, 1063, 1359
BssHII	GCGCGC	1 cut(s)	888
BssMI	GATC	4 cut(s)	319, 805, 976, 1009
BssNI	GRCGYC	2 cut(s)	291, 335
BssT1I	CCWWGG	3 cut(s)	645, 1063, 1359
Bst2UI	CCWGG	3 cut(s)	39, 579, 869
Bst4CI	ACNGT	6 cut(s)	64, 105, 115, 988, 1024, 1310
Bst6I	CTCTTC	2 cut(s)	696, 1390
BstACI	GRCGYC	2 cut(s)	291, 335
BstC8I	GCNNGC	8 cut(s)	351, 382, 687, 886, 890, 932, 1053, 1139
BstDEI	CTNAG	3 cut(s)	327, 507, 528
BstF5I	GGATG	3 cut(s)	1059, 1069, 1372
BstFNI	CGCG	2 cut(s)	890, 1166
BstHHI	GCGC	3 cut(s)	890, 892, 1265
BstKTI	GATC	4 cut(s)	322, 808, 979, 1012
BstMAI	GTCTC	1 cut(s)	282
BstMBI	GATC	4 cut(s)	319, 805, 976, 1009
BstMCI	CGRYCG	2 cut(s)	66, 825
BstMWI	GCNNNNNNNGC	4 cut(s)	533, 583, 682, 1052
BstNI	CCWGG	3 cut(s)	39, 579, 869
BstNSI	RCATGY	2 cut(s)	373, 689
BstSCI	CCNGG	6 cut(s)	37, 238, 239, 353, 577, 867
BstSLI	GKGCMC	1 cut(s)	1048
BstUI	CGCG	2 cut(s)	890, 1166
BstV1I	GCAGC	1 cut(s)	73
BstV2I	GAAGAC	1 cut(s)	1275
BstX2I	RGATCY	1 cut(s)	976
BstYI	RGATCY	1 cut(s)	976
BsuI	GTATCC	1 cut(s)	741
BtrI	CACGTC	4 cut(s)	283, 394, 625, 1252
BtsCI	GGATG	3 cut(s)	1059, 1069, 1372
BtsI	GCAGTG	1 cut(s)	1221
BtsIMutI	CAGTG	4 cut(s)	156, 741, 1221, 1315
Cac8I	GCNNGC	8 cut(s)	351, 382, 687, 886, 890, 932, 1053, 1139
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	3 cut(s)	890, 892, 1265
Cfr10I	RCCGGY	1 cut(s)	930
Cfr13I	GGNCC	7 cut(s)	243, 740, 865, 921, 933, 1044, 1045
Cfr9I	CCCGGG	1 cut(s)	239
CseI	GACGC	1 cut(s)	299
Csp6I	GTAC	2 cut(s)	305, 1162
CviAII	CATG	7 cut(s)	124, 370, 595, 670, 686, 847, 1152
CviQI	GTAC	2 cut(s)	305, 1162
DdeI	CTNAG	3 cut(s)	327, 507, 528
DpnI	GATC	4 cut(s)	321, 807, 978, 1011
DpnII	GATC	4 cut(s)	319, 805, 976, 1009
EaeI	YGGCCR	5 cut(s)	46, 396, 534, 1056, 1154
Eam1104I	CTCTTC	2 cut(s)	696, 1390
EarI	CTCTTC	2 cut(s)	696, 1390
Ecl136II	GAGCTC	1 cut(s)	519
Eco130I	CCWWGG	3 cut(s)	645, 1063, 1359
Eco147I	AGGCCT	1 cut(s)	779
Eco24I	GRGCYC	2 cut(s)	521, 1048
Eco32I	GATATC	1 cut(s)	787
Eco47I	GGWCC	3 cut(s)	243, 740, 921
Eco53kI	GAGCTC	1 cut(s)	519
Eco57I	CTGAAG	1 cut(s)	235
Eco88I	CYCGRG	4 cut(s)	90, 239, 311, 541
EcoICRI	GAGCTC	1 cut(s)	519
EcoO109I	RGGNCCY	3 cut(s)	243, 740, 1045
EcoRI	GAATTC	1 cut(s)	1108
EcoRII	CCWGG	3 cut(s)	37, 577, 867
EcoRV	GATATC	1 cut(s)	787
EcoT14I	CCWWGG	3 cut(s)	645, 1063, 1359
EcoT38I	GRGCYC	2 cut(s)	521, 1048
ErhI	CCWWGG	3 cut(s)	645, 1063, 1359
Esp3I	CGTCTC	1 cut(s)	282
FaeI	CATG	7 cut(s)	127, 373, 598, 673, 689, 850, 1155
FalI	AAGNNNNNCTT	6 cut(s)	974, 1006, 990, 1022, 1343, 1375
FaqI	GGGAC	7 cut(s)	107, 215, 448, 524, 753, 907, 1256
FatI	CATG	7 cut(s)	123, 369, 594, 669, 685, 846, 1151
FauI	CCCGC	3 cut(s)	40, 1056, 1094
FbaI	TGATCA	1 cut(s)	805
FblI	GTMKAC	1 cut(s)	332
Fnu4HI	GCNGC	4 cut(s)	87, 567, 1056, 1149
FokI	GGATG	3 cut(s)	1046, 1056, 1379
FriOI	GRGCYC	2 cut(s)	521, 1048
Fsp4HI	GCNGC	4 cut(s)	87, 567, 1056, 1149
FspBI	CTAG	4 cut(s)	20, 677, 893, 1064
GlaI	GCGC	3 cut(s)	889, 891, 1264
GluI	GCNGC	4 cut(s)	87, 567, 1056, 1149
HapII	CCGG	6 cut(s)	212, 240, 354, 931, 1073, 1080
HgaI	GACGC	1 cut(s)	299
HhaI	GCGC	3 cut(s)	890, 892, 1265
Hin1I	GRCGYC	2 cut(s)	291, 335
Hin1II	CATG	7 cut(s)	127, 373, 598, 673, 689, 850, 1155
Hin6I	GCGC	3 cut(s)	888, 890, 1263
HinP1I	GCGC	3 cut(s)	888, 890, 1263
HincII	GTYRAC	3 cut(s)	193, 333, 513
HindII	GTYRAC	3 cut(s)	193, 333, 513
HindIII	AAGCTT	1 cut(s)	128
HinfI	GANTC	5 cut(s)	161, 314, 329, 680, 704
HpaII	CCGG	6 cut(s)	212, 240, 354, 931, 1073, 1080
HphI	GGTGA	8 cut(s)	142, 167, 424, 722, 872, 883, 1045, 1270
Hpy166II	GTNNAC	3 cut(s)	193, 333, 513
Hpy188I	TCNGA	7 cut(s)	254, 287, 319, 328, 784, 1014, 1239
Hpy188III	TCNNGA	9 cut(s)	67, 92, 124, 482, 541, 590, 701, 790, 1007
Hpy8I	GTNNAC	3 cut(s)	193, 333, 513
Hpy99I	CGWCG	4 cut(s)	266, 337, 340, 1253
HpyAV	CCTTC	5 cut(s)	256, 935, 992, 1024, 1324
HpyCH4III	ACNGT	6 cut(s)	64, 105, 115, 988, 1024, 1310
HpyCH4IV	ACGT	7 cut(s)	282, 303, 335, 393, 624, 1115, 1251
HpyCH4V	TGCA	1 cut(s)	455
HpyF10VI	GCNNNNNNNGC	4 cut(s)	533, 583, 682, 1052
HpyF3I	CTNAG	3 cut(s)	327, 507, 528
HpySE526I	ACGT	7 cut(s)	282, 303, 335, 393, 624, 1115, 1251
Hsp92I	GRCGYC	2 cut(s)	291, 335
Hsp92II	CATG	7 cut(s)	127, 373, 598, 673, 689, 850, 1155
HspAI	GCGC	3 cut(s)	888, 890, 1263
KflI	GGGWCCC	1 cut(s)	740
KroI	GCCGGC	1 cut(s)	930
KroNI	GCCGGC	1 cut(s)	932
Ksp22I	TGATCA	1 cut(s)	805
Kzo9I	GATC	4 cut(s)	319, 805, 976, 1009
LguI	GCTCTTC	1 cut(s)	696
LmnI	GCTCC	3 cut(s)	673, 1168, 1300
Lsp1109I	GCAGC	1 cut(s)	73
LweI	GCATC	2 cut(s)	51, 189
MaeI	CTAG	4 cut(s)	20, 677, 893, 1064
MaeII	ACGT	7 cut(s)	282, 303, 335, 393, 624, 1115, 1251
MaeIII	GTNAC	1 cut(s)	482
MalI	GATC	4 cut(s)	321, 807, 978, 1011
MboI	GATC	4 cut(s)	319, 805, 976, 1009
MboII	GAAGA	9 cut(s)	16, 156, 241, 421, 683, 782, 1280, 1368, 1377
MfeI	CAATTG	1 cut(s)	1190
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	5 cut(s)	366, 521, 605, 900, 1048
MlsI	TGGCCA	2 cut(s)	398, 1156
MluCI	AATT	5 cut(s)	387, 404, 1108, 1190, 1410
MluNI	TGGCCA	2 cut(s)	398, 1156
MlyI	GAGTC	2 cut(s)	323, 338
MmeI	TCCRAC	2 cut(s)	462, 1098
Mox20I	TGGCCA	2 cut(s)	398, 1156
MroNI	GCCGGC	1 cut(s)	930
MroXI	GAANNNNTTC	1 cut(s)	1002
MscI	TGGCCA	2 cut(s)	398, 1156
MseI	TTAA	3 cut(s)	408, 1224, 1414
Msp20I	TGGCCA	2 cut(s)	398, 1156
MspA1I	CMGCKG	2 cut(s)	527, 903
MspI	CCGG	6 cut(s)	212, 240, 354, 931, 1073, 1080
MspR9I	CCNGG	6 cut(s)	39, 240, 241, 355, 579, 869
MunI	CAATTG	1 cut(s)	1190
Mva1269I	GAATGC	1 cut(s)	1186
MvaI	CCWGG	3 cut(s)	39, 579, 869
MvnI	CGCG	2 cut(s)	890, 1166
MwoI	GCNNNNNNNGC	4 cut(s)	533, 583, 682, 1052
NaeI	GCCGGC	1 cut(s)	932
NciI	CCSGG	3 cut(s)	240, 241, 355
NdeII	GATC	4 cut(s)	319, 805, 976, 1009
NgoMIV	GCCGGC	1 cut(s)	930
NlaIII	CATG	7 cut(s)	127, 373, 598, 673, 689, 850, 1155
NlaIV	GGNNCC	8 cut(s)	244, 414, 741, 742, 923, 935, 1046, 1047
NmeAIII	GCCGAG	1 cut(s)	325
NmuCI	GTSAC	1 cut(s)	482
NspI	RCATGY	2 cut(s)	373, 689
PaeI	GCATGC	1 cut(s)	689
PagI	TCATGA	1 cut(s)	123
PauI	GCGCGC	1 cut(s)	888
PceI	AGGCCT	1 cut(s)	779
PciI	ACATGT	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	3 cut(s)	51, 309, 399
PctI	GAATGC	1 cut(s)	1186
PdiI	GCCGGC	1 cut(s)	932
PdmI	GAANNNNTTC	1 cut(s)	1002
PfeI	GAWTC	3 cut(s)	161, 680, 704
PflFI	GACNNNGTC	1 cut(s)	227
PkrI	GCNGC	4 cut(s)	88, 568, 1057, 1150
PleI	GAGTC	2 cut(s)	322, 337
PpsI	GAGTC	2 cut(s)	322, 337
PpuMI	RGGWCCY	2 cut(s)	243, 740
PscI	ACATGT	1 cut(s)	369
Psp124BI	GAGCTC	1 cut(s)	521
Psp5II	RGGWCCY	2 cut(s)	243, 740
Psp6I	CCWGG	3 cut(s)	37, 577, 867
PspGI	CCWGG	3 cut(s)	37, 577, 867
PspN4I	GGNNCC	8 cut(s)	244, 414, 741, 742, 923, 935, 1046, 1047
PspOMI	GGGCCC	1 cut(s)	1044
PspPI	GGNCC	7 cut(s)	243, 740, 865, 921, 933, 1044, 1045
PspPPI	RGGWCCY	2 cut(s)	243, 740
PsuI	RGATCY	1 cut(s)	976
PsyI	GACNNNGTC	1 cut(s)	227
PteI	GCGCGC	1 cut(s)	888
RsaI	GTAC	2 cut(s)	306, 1163
RsaNI	GTAC	2 cut(s)	305, 1162
SacI	GAGCTC	1 cut(s)	521
SalI	GTCGAC	1 cut(s)	331
SapI	GCTCTTC	1 cut(s)	696
SaqAI	TTAA	3 cut(s)	408, 1224, 1414
SatI	GCNGC	4 cut(s)	87, 567, 1056, 1149
Sau3AI	GATC	4 cut(s)	319, 805, 976, 1009
Sau96I	GGNCC	7 cut(s)	243, 740, 865, 921, 933, 1044, 1045
SchI	GAGTC	2 cut(s)	323, 338
ScrFI	CCNGG	6 cut(s)	39, 240, 241, 355, 579, 869
SduI	GDGCHC	5 cut(s)	366, 521, 605, 900, 1048
SfaNI	GCATC	2 cut(s)	51, 189
SinI	GGWCC	3 cut(s)	243, 740, 921
SmaI	CCCGGG	1 cut(s)	241
SmlI	CTYRAG	2 cut(s)	790, 942
SmoI	CTYRAG	2 cut(s)	790, 942
SpeI	ACTAGT	1 cut(s)	19
SphI	GCATGC	1 cut(s)	689
Sse9I	AATT	5 cut(s)	387, 404, 1108, 1190, 1410
SseBI	AGGCCT	1 cut(s)	779
SspMI	CTAG	4 cut(s)	20, 677, 893, 1064
SstI	GAGCTC	1 cut(s)	521
StuI	AGGCCT	1 cut(s)	779
StyD4I	CCNGG	6 cut(s)	37, 238, 239, 353, 577, 867
StyI	CCWWGG	3 cut(s)	645, 1063, 1359
TaaI	ACNGT	6 cut(s)	64, 105, 115, 988, 1024, 1310
TaiI	ACGT	7 cut(s)	285, 306, 338, 396, 627, 1118, 1254
TaqI	TCGA	5 cut(s)	66, 264, 332, 338, 366
TaqII	GACCGA	1 cut(s)	811
TasI	AATT	5 cut(s)	387, 404, 1108, 1190, 1410
TauI	GCSGC	3 cut(s)	569, 1058, 1151
TfiI	GAWTC	3 cut(s)	161, 680, 704
Tru1I	TTAA	3 cut(s)	408, 1224, 1414
Tru9I	TTAA	3 cut(s)	408, 1224, 1414
TscAI	CASTG	4 cut(s)	163, 741, 1221, 1315
TseFI	GTSAC	1 cut(s)	482
TseI	GCWGC	1 cut(s)	86
Tsp45I	GTSAC	1 cut(s)	482
TspDTI	ATGAA	7 cut(s)	17, 140, 538, 658, 683, 783, 1377
TspMI	CCCGGG	1 cut(s)	239
TspRI	CASTG	4 cut(s)	163, 741, 1221, 1315
Tth111I	GACNNNGTC	1 cut(s)	227
VpaK11BI	GGWCC	3 cut(s)	243, 740, 921
XapI	RAATTY	3 cut(s)	404, 1108, 1410
XceI	RCATGY	2 cut(s)	373, 689
XcmI	CCANNNNNNNNNTGG	1 cut(s)	652
XmaI	CCCGGG	1 cut(s)	239
XmaJI	CCTAGG	1 cut(s)	1063
XmiI	GTMKAC	1 cut(s)	332
XmnI	GAANNNNTTC	1 cut(s)	1002
XspI	CTAG	4 cut(s)	20, 677, 893, 1064
ZraI	GACGTC	1 cut(s)	336

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.