Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

31126325 .. 31128444

Gene Structure 2120 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g39380.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGAAGAAAGCTTCAGAGCTAATCTTCATCCCAATCCCAGGTATGGGCCACATCGTCTCAACCGTTGAGATTGCAAAGCTCCTCCTCTGTCGAGATGACAACCTCTTCATCACAATCCTCATCATGAAATTCCCCTTCACCGCAGACGGCAGCGACGTCTACATCAAGTCCTTGGCAGTCGACCCTTCGTTGAAGACGCAGCGCATCAGGTTCGTCAACCTCCCACAAGAACATTTCCAAGGAACTGGAGCCACCGGCTTCTTCACCTTCATCGACAGCCACAAGTCCCACGTCAAAGATGCCGTCACTAAACTCATGGAAACCAAATCAGAGACGACTCGGATCGCCGGATTTGTCATCGACATGTTCTGCACGGGGATGATCGACGTGGCTAACGAGTTCGGGCTCCCTAGCTACGTGTTCTACACCTCTGGAGCTGCGGATCTTGGGCTCATGTTCCACCTCCAAGCCTTACGTGATGAAGAGAACAAGGACTGCACCGAGTTCAAGGACTCGGACGCCGAGTTGGTCGTCTCGTCTTTCGTCAACCCCTTGCCGGCTGCTAGAGTCTTGCCTTCTGTTGTTTTCGAGAAGGAGGGGGGCAACTTCTTCCTCAACTTTGCCAAAAGGTACAGAGAGACCAAGGGTATTTTGGTTAACACGTTCCTGGAGCTCGAGCCTCACGCGATTCAGTCTCTCAGTTCCGACGGTAAGATCCCACCGGTGTATCCGGTGGGACCCATATTGAACGTCAAGAGCGAGGGTAACCAAGTGAGTTCAGAGAAGTCGAAGCAGAAGTCGGATATTTTGGAGTGGCTTGATGACCAGCCTCCGTCGTCTGTGGTGTTCTTGTGCTTCGGGAGCATGGGATGCTTTGGCGAAGACCAAGTGAAAGAGATCGCACACGCACTCGAGCAAGGTGGGATTCGGTTCTTGTGGTCTCTACGCCAGCCTTCGAAAGAAAAGATCGGTTTTCCGAGCGATTACACGGATTACAAAGCAGTCTTACCCGAAGGTTTTCTCGACCGGACGACTGATCTCGGGAAGGTGATAGGTTGGGCCCCACAGTTGGCCATCTTGGCACATCCGGCGGTCGGAGGGTTTGTGTCTCATTGTGGTTGGAACTCTACGCTGGAAAGTATTTGGTATGGTGTGCCGATTGCCACGTGGCCGTTCTATGCCGAGCAACAAGTGAATGCCTTTGAGCTGGTGAAGGAACTGAAATTGGCTGTTGAGATCGACATGGGATATAGAAAAGACAGCGGGGTTATTGTGAGCAGGGAAAACATAGAGAAAGGGATAAAGGAGGTGATGGAGCAAGAGAGTGAACTTAGGAAGAGGGTGAAGGAAATGAGTCAAATGAGCAGGAAAGCTTTGGAGGAGGATGGGTCTTCATACTCATCGCTAGGGCGTTTTCTCGATCAAATTCAAACCTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

480

Amino Acids

53.44

Weight (kDa)

5.27

Isoelectric Point (pI)

42.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	243 - 442	2.5e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	159
AccI	GTMKAC	2 cut(s)	159, 180
AccII	CGCG	1 cut(s)	686
AciI	CCGC	4 cut(s)	141, 440, 1091, 1263
AclWI	GGATC	3 cut(s)	350, 450, 709
AcoI	YGGCCR	2 cut(s)	1071, 1169
AcsI	RAATTY	2 cut(s)	128, 1425
AcvI	CACGTG	1 cut(s)	1167
AcyI	GRCGYC	2 cut(s)	156, 519
AfaI	GTAC	1 cut(s)	632
AfiI	CCNNNNNNNGG	6 cut(s)	38, 43, 44, 556, 1069, 1094
AflIII	ACRYGT	3 cut(s)	363, 417, 660
AgeI	ACCGGT	1 cut(s)	721
AgsI	TTSAA	4 cut(s)	193, 508, 748, 1430
AjiI	CACGTC	2 cut(s)	292, 388
AjnI	CCWGG	2 cut(s)	37, 666
AluBI	AGCT	8 cut(s)	11, 19, 79, 414, 437, 673, 1207, 1373
AluI	AGCT	8 cut(s)	11, 19, 79, 414, 437, 673, 1207, 1373
Alw21I	GWGCWC	1 cut(s)	675
Alw26I	GTCTC	7 cut(s)	61, 326, 538, 632, 699, 945, 1113
AlwI	GGATC	3 cut(s)	350, 450, 709
Ama87I	CYCGRG	3 cut(s)	674, 911, 1040
AoxI	GGCC	4 cut(s)	46, 1059, 1071, 1169
ApaI	GGGCCC	1 cut(s)	1063
ApeKI	GCWGC	4 cut(s)	150, 199, 437, 560
ApoI	RAATTY	2 cut(s)	128, 1425
ArsI	GACNNNNNNTTYG	4 cut(s)	288, 320, 782, 814
AsiGI	ACCGGT	1 cut(s)	721
Asp700I	GAANNNNTTC	1 cut(s)	1017
AspLEI	GCGC	1 cut(s)	204
AspS9I	GGNCC	4 cut(s)	46, 737, 1059, 1060
AsuHPI	GGTGA	6 cut(s)	130, 256, 1060, 1222, 1321, 1354
AsuII	TTCGAA	1 cut(s)	956
AvaI	CYCGRG	3 cut(s)	674, 911, 1040
AvaII	GGWCC	1 cut(s)	737
BaeGI	GKGCMC	1 cut(s)	1063
BaeI	ACNNNNGTAYC	2 cut(s)	710, 743
BalI	TGGCCA	1 cut(s)	1073
BanII	GRGCYC	4 cut(s)	408, 453, 675, 1063
BauI	CACGAG	1 cut(s)	1435
BbrPI	CACGTG	1 cut(s)	1167
BbsI	GAAGAC	3 cut(s)	200, 888, 1383
Bbv12I	GWGCWC	1 cut(s)	675
BbvI	GCAGC	4 cut(s)	162, 211, 424, 547
BccI	CCATC	3 cut(s)	1082, 1306, 1379
BceAI	ACGGC	3 cut(s)	163, 287, 1156
BcgI	CGANNNNNNTGC	2 cut(s)	193, 227
BciT130I	CCWGG	2 cut(s)	39, 668
BciVI	GTATCC	1 cut(s)	738
BcoDI	GTCTC	7 cut(s)	61, 326, 538, 632, 699, 945, 1113
BfaI	CTAG	3 cut(s)	411, 564, 1406
BfuI	GTATCC	1 cut(s)	738
BglI	GCCNNNNNGGC	1 cut(s)	1079
BisI	GCNGC	4 cut(s)	151, 200, 438, 561
BlsI	GCNGC	4 cut(s)	152, 201, 439, 562
Bme1390I	CCNGG	2 cut(s)	39, 668
Bme18I	GGWCC	1 cut(s)	737
BmeT110I	CYCGRG	3 cut(s)	674, 911, 1040
BmgBI	CACGTC	2 cut(s)	292, 388
BmgT120I	GGNCC	4 cut(s)	46, 737, 1059, 1060
BmiI	GGNNCC	6 cut(s)	250, 407, 738, 739, 1061, 1062
BmrFI	CCNGG	2 cut(s)	39, 668
BmsI	GCATC	3 cut(s)	213, 289, 860
BpiI	GAAGAC	3 cut(s)	200, 888, 1383
BpmI	CTGGAG	3 cut(s)	267, 453, 689
Bpu14I	TTCGAA	1 cut(s)	956
BsaAI	YACGTR	3 cut(s)	418, 476, 1167
BsaHI	GRCGYC	2 cut(s)	156, 519
BsaI	GGTCTC	2 cut(s)	632, 945
BsaJI	CCNNGG	4 cut(s)	37, 171, 238, 642
BsaWI	WCCGGW	3 cut(s)	721, 730, 1026
BsaXI	ACNNNNNCTCC	4 cut(s)	1089, 1119, 1373, 1403
Bsc4I	CCNNNNNNNGG	6 cut(s)	38, 43, 44, 556, 1069, 1094
Bse118I	RCCGGY	3 cut(s)	254, 556, 721
Bse1I	ACTGG	1 cut(s)	250
BseBI	CCWGG	2 cut(s)	39, 668
BseDI	CCNNGG	4 cut(s)	37, 171, 238, 642
BseGI	GGATG	5 cut(s)	27, 384, 875, 1084, 1390
BseLI	CCNNNNNNNGG	6 cut(s)	38, 43, 44, 556, 1069, 1094
BseMII	CTCAG	1 cut(s)	712
BseNI	ACTGG	1 cut(s)	250
BseRI	GAGGAG	3 cut(s)	71, 74, 1394
BseSI	GKGCMC	1 cut(s)	1063
BseXI	GCAGC	4 cut(s)	162, 211, 424, 547
BsgI	GTGCAG	2 cut(s)	355, 481
Bsh1236I	CGCG	1 cut(s)	686
Bsh1285I	CGRYCG	2 cut(s)	1027, 1095
BshFI	GGCC	4 cut(s)	48, 1061, 1073, 1171
BshTI	ACCGGT	1 cut(s)	721
BsiEI	CGRYCG	2 cut(s)	1027, 1095
BsiHKAI	GWGCWC	1 cut(s)	675
BsiHKCI	CYCGRG	3 cut(s)	674, 911, 1040
BsiSI	CCGG	7 cut(s)	255, 348, 557, 722, 731, 1027, 1088
BslFI	GGGAC	2 cut(s)	271, 750
BslI	CCNNNNNNNGG	6 cut(s)	38, 43, 44, 556, 1069, 1094
BsmAI	GTCTC	7 cut(s)	61, 326, 538, 632, 699, 945, 1113
BsmBI	CGTCTC	3 cut(s)	61, 326, 538
BsmFI	GGGAC	2 cut(s)	271, 750
BsmI	GAATGC	1 cut(s)	1201
BsnI	GGCC	4 cut(s)	48, 1061, 1073, 1171
Bso31I	GGTCTC	2 cut(s)	632, 945
BsoBI	CYCGRG	3 cut(s)	674, 911, 1040
Bsp119I	TTCGAA	1 cut(s)	956
Bsp120I	GGGCCC	1 cut(s)	1059
Bsp1286I	GDGCHC	4 cut(s)	408, 453, 675, 1063
Bsp143I	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
BspACI	CCGC	4 cut(s)	141, 440, 1091, 1263
BspANI	GGCC	4 cut(s)	48, 1061, 1073, 1171
BspCNI	CTCAG	1 cut(s)	711
BspFNI	CGCG	1 cut(s)	686
BspHI	TCATGA	1 cut(s)	123
BspLI	GGNNCC	6 cut(s)	250, 407, 738, 739, 1061, 1062
BspPI	GGATC	3 cut(s)	350, 450, 709
BspT104I	TTCGAA	1 cut(s)	956
BspTNI	GGTCTC	2 cut(s)	632, 945
BsrFI	RCCGGY	3 cut(s)	254, 556, 721
BsrI	ACTGG	1 cut(s)	250
BssAI	RCCGGY	3 cut(s)	254, 556, 721
BssECI	CCNNGG	4 cut(s)	37, 171, 238, 642
BssMI	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
BssNI	GRCGYC	2 cut(s)	156, 519
BssSI	CACGAG	1 cut(s)	1435
BssT1I	CCWWGG	3 cut(s)	171, 238, 642
Bst2BI	CACGAG	1 cut(s)	1435
Bst2UI	CCWGG	2 cut(s)	39, 668
Bst4CI	ACNGT	3 cut(s)	64, 710, 1068
Bst6I	CTCTTC	3 cut(s)	110, 477, 1331
BstACI	GRCGYC	2 cut(s)	156, 519
BstAPI	GCANNNNNTGC	1 cut(s)	870
BstBAI	YACGTR	3 cut(s)	418, 476, 1167
BstBI	TTCGAA	1 cut(s)	956
BstC8I	GCNNGC	2 cut(s)	558, 950
BstDEI	CTNAG	2 cut(s)	698, 1331
BstEII	GGTNACC	1 cut(s)	764
BstF5I	GGATG	5 cut(s)	27, 384, 875, 1084, 1390
BstFNI	CGCG	1 cut(s)	686
BstHHI	GCGC	1 cut(s)	204
BstKTI	GATC	9 cut(s)	345, 384, 445, 717, 900, 969, 1039, 1239, 1423
BstMAI	GTCTC	7 cut(s)	61, 326, 538, 632, 699, 945, 1113
BstMBI	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
BstMCI	CGRYCG	2 cut(s)	1027, 1095
BstMWI	GCNNNNNNNGC	4 cut(s)	861, 870, 1079, 1088
BstNI	CCWGG	2 cut(s)	39, 668
BstNSI	RCATGY	1 cut(s)	367
BstPI	GGTNACC	1 cut(s)	764
BstSCI	CCNGG	2 cut(s)	37, 666
BstSLI	GKGCMC	1 cut(s)	1063
BstUI	CGCG	1 cut(s)	686
BstV1I	GCAGC	4 cut(s)	162, 211, 424, 547
BstV2I	GAAGAC	3 cut(s)	200, 888, 1383
BstX2I	RGATCY	2 cut(s)	442, 714
BstXI	CCANNNNNNTGG	1 cut(s)	245
BstYI	RGATCY	2 cut(s)	442, 714
BsuI	GTATCC	1 cut(s)	738
BsuRI	GGCC	4 cut(s)	48, 1061, 1073, 1171
BtgZI	GCGATG	1 cut(s)	1386
BtrI	CACGTC	2 cut(s)	292, 388
BtsCI	GGATG	5 cut(s)	27, 384, 875, 1084, 1390
Cac8I	GCNNGC	2 cut(s)	558, 950
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	1 cut(s)	204
Cfr10I	RCCGGY	3 cut(s)	254, 556, 721
Cfr13I	GGNCC	4 cut(s)	46, 737, 1059, 1060
CseI	GACGC	2 cut(s)	205, 527
Csp6I	GTAC	1 cut(s)	631
CspAI	ACCGGT	1 cut(s)	721
CviAII	CATG	6 cut(s)	124, 316, 364, 454, 865, 1243
CviQI	GTAC	1 cut(s)	631
DdeI	CTNAG	2 cut(s)	698, 1331
DpnI	GATC	9 cut(s)	344, 383, 444, 716, 899, 968, 1038, 1238, 1422
DpnII	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
EaeI	YGGCCR	2 cut(s)	1071, 1169
Eam1104I	CTCTTC	3 cut(s)	110, 477, 1331
EarI	CTCTTC	3 cut(s)	110, 477, 1331
Ecl136II	GAGCTC	1 cut(s)	673
Eco130I	CCWWGG	3 cut(s)	171, 238, 642
Eco24I	GRGCYC	4 cut(s)	408, 453, 675, 1063
Eco31I	GGTCTC	2 cut(s)	632, 945
Eco47I	GGWCC	1 cut(s)	737
Eco53kI	GAGCTC	1 cut(s)	673
Eco72I	CACGTG	1 cut(s)	1167
Eco88I	CYCGRG	3 cut(s)	674, 911, 1040
Eco91I	GGTNACC	1 cut(s)	764
EcoICRI	GAGCTC	1 cut(s)	673
EcoO109I	RGGNCCY	2 cut(s)	737, 1060
EcoO65I	GGTNACC	1 cut(s)	764
EcoRII	CCWGG	2 cut(s)	37, 666
EcoT14I	CCWWGG	3 cut(s)	171, 238, 642
EcoT38I	GRGCYC	4 cut(s)	408, 453, 675, 1063
ErhI	CCWWGG	3 cut(s)	171, 238, 642
Esp3I	CGTCTC	3 cut(s)	61, 326, 538
FaeI	CATG	6 cut(s)	127, 319, 367, 457, 868, 1246
FaqI	GGGAC	2 cut(s)	271, 750
FatI	CATG	6 cut(s)	123, 315, 363, 453, 864, 1242
FauI	CCCGC	1 cut(s)	1256
FblI	GTMKAC	2 cut(s)	159, 180
Fnu4HI	GCNGC	4 cut(s)	151, 200, 438, 561
FokI	GGATG	5 cut(s)	14, 391, 882, 1071, 1397
FriOI	GRGCYC	4 cut(s)	408, 453, 675, 1063
Fsp4HI	GCNGC	4 cut(s)	151, 200, 438, 561
FspBI	CTAG	3 cut(s)	411, 564, 1406
GlaI	GCGC	1 cut(s)	203
GluI	GCNGC	4 cut(s)	151, 200, 438, 561
GsuI	CTGGAG	3 cut(s)	267, 453, 689
HaeIII	GGCC	4 cut(s)	48, 1061, 1073, 1171
HapII	CCGG	7 cut(s)	255, 348, 557, 722, 731, 1027, 1088
HgaI	GACGC	2 cut(s)	205, 527
HhaI	GCGC	1 cut(s)	204
Hin1I	GRCGYC	2 cut(s)	156, 519
Hin1II	CATG	6 cut(s)	127, 319, 367, 457, 868, 1246
Hin6I	GCGC	1 cut(s)	202
HinP1I	GCGC	1 cut(s)	202
HincII	GTYRAC	4 cut(s)	181, 217, 547, 658
HindII	GTYRAC	4 cut(s)	181, 217, 547, 658
HindIII	AAGCTT	2 cut(s)	9, 1371
HinfI	GANTC	6 cut(s)	337, 512, 567, 688, 925, 1354
HpaI	GTTAAC	1 cut(s)	658
HpaII	CCGG	7 cut(s)	255, 348, 557, 722, 731, 1027, 1088
HphI	GGTGA	6 cut(s)	130, 256, 1060, 1222, 1321, 1354
Hpy166II	GTNNAC	6 cut(s)	160, 181, 217, 547, 658, 1328
Hpy188I	TCNGA	9 cut(s)	16, 331, 342, 517, 706, 781, 802, 978, 1097
Hpy8I	GTNNAC	6 cut(s)	160, 181, 217, 547, 658, 1328
Hpy99I	CGWCG	4 cut(s)	158, 389, 710, 838
HpyCH4III	ACNGT	3 cut(s)	64, 710, 1068
HpyCH4IV	ACGT	8 cut(s)	156, 291, 387, 417, 475, 662, 750, 1166
HpyCH4V	TGCA	3 cut(s)	74, 372, 498
HpyF10VI	GCNNNNNNNGC	4 cut(s)	861, 870, 1079, 1088
HpyF3I	CTNAG	2 cut(s)	698, 1331
HpySE526I	ACGT	8 cut(s)	156, 291, 387, 417, 475, 662, 750, 1166
Hsp92I	GRCGYC	2 cut(s)	156, 519
Hsp92II	CATG	6 cut(s)	127, 319, 367, 457, 868, 1246
HspAI	GCGC	1 cut(s)	202
KflI	GGGWCCC	1 cut(s)	737
KroI	GCCGGC	1 cut(s)	556
KroNI	GCCGGC	1 cut(s)	558
KspAI	GTTAAC	1 cut(s)	658
Kzo9I	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
LmnI	GCTCC	7 cut(s)	84, 248, 411, 434, 670, 861, 1315
Lsp1109I	GCAGC	4 cut(s)	162, 211, 424, 547
LweI	GCATC	3 cut(s)	213, 289, 860
MaeI	CTAG	3 cut(s)	411, 564, 1406
MaeII	ACGT	8 cut(s)	156, 291, 387, 417, 475, 662, 750, 1166
MaeIII	GTNAC	2 cut(s)	304, 764
MalI	GATC	9 cut(s)	344, 383, 444, 716, 899, 968, 1038, 1238, 1422
MboI	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
MflI	RGATCY	2 cut(s)	442, 714
MhlI	GDGCHC	4 cut(s)	408, 453, 675, 1063
MlsI	TGGCCA	1 cut(s)	1073
MluCI	AATT	3 cut(s)	128, 1223, 1425
MluNI	TGGCCA	1 cut(s)	1073
MlyI	GAGTC	4 cut(s)	331, 506, 576, 1363
MmeI	TCCRAC	4 cut(s)	729, 780, 1075, 1100
Mox20I	TGGCCA	1 cut(s)	1073
MroNI	GCCGGC	1 cut(s)	556
MroXI	GAANNNNTTC	1 cut(s)	1017
MscI	TGGCCA	1 cut(s)	1073
MseI	TTAA	1 cut(s)	657
MslI	CAYNNNNRTG	2 cut(s)	362, 377
Msp20I	TGGCCA	1 cut(s)	1073
MspA1I	CMGCKG	1 cut(s)	1263
MspI	CCGG	7 cut(s)	255, 348, 557, 722, 731, 1027, 1088
MspR9I	CCNGG	2 cut(s)	39, 668
Mva1269I	GAATGC	1 cut(s)	1201
MvaI	CCWGG	2 cut(s)	39, 668
MvnI	CGCG	1 cut(s)	686
MwoI	GCNNNNNNNGC	4 cut(s)	861, 870, 1079, 1088
NaeI	GCCGGC	1 cut(s)	558
NdeII	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
NgoMIV	GCCGGC	1 cut(s)	556
NlaIII	CATG	6 cut(s)	127, 319, 367, 457, 868, 1246
NlaIV	GGNNCC	6 cut(s)	250, 407, 738, 739, 1061, 1062
NmeAIII	GCCGAG	2 cut(s)	547, 1207
NmuCI	GTSAC	1 cut(s)	304
NspI	RCATGY	1 cut(s)	367
NspV	TTCGAA	1 cut(s)	956
PaeR7I	CTCGAG	2 cut(s)	674, 911
PagI	TCATGA	1 cut(s)	123
PciI	ACATGT	1 cut(s)	363
PcsI	WCGNNNNNNNCGW	4 cut(s)	60, 153, 393, 756
PctI	GAATGC	1 cut(s)	1201
PdiI	GCCGGC	1 cut(s)	558
PdmI	GAANNNNTTC	1 cut(s)	1017
PfeI	GAWTC	2 cut(s)	688, 925
PfoI	TCCNGGA	1 cut(s)	666
PinAI	ACCGGT	1 cut(s)	721
PkrI	GCNGC	4 cut(s)	152, 201, 439, 562
PleI	GAGTC	4 cut(s)	331, 506, 575, 1362
PmaCI	CACGTG	1 cut(s)	1167
PmlI	CACGTG	1 cut(s)	1167
PpsI	GAGTC	4 cut(s)	331, 506, 575, 1362
Ppu21I	YACGTR	3 cut(s)	418, 476, 1167
PpuMI	RGGWCCY	1 cut(s)	737
PscI	ACATGT	1 cut(s)	363
Psp124BI	GAGCTC	1 cut(s)	675
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	2 cut(s)	37, 666
PspCI	CACGTG	1 cut(s)	1167
PspEI	GGTNACC	1 cut(s)	764
PspGI	CCWGG	2 cut(s)	37, 666
PspN4I	GGNNCC	6 cut(s)	250, 407, 738, 739, 1061, 1062
PspOMI	GGGCCC	1 cut(s)	1059
PspPI	GGNCC	4 cut(s)	46, 737, 1059, 1060
PspPPI	RGGWCCY	1 cut(s)	737
PspXI	VCTCGAGB	2 cut(s)	674, 911
PsuI	RGATCY	2 cut(s)	442, 714
RsaI	GTAC	1 cut(s)	632
RsaNI	GTAC	1 cut(s)	631
RseI	CAYNNNNRTG	2 cut(s)	362, 377
SacI	GAGCTC	1 cut(s)	675
SalI	GTCGAC	1 cut(s)	179
SaqAI	TTAA	1 cut(s)	657
SatI	GCNGC	4 cut(s)	151, 200, 438, 561
Sau3AI	GATC	9 cut(s)	342, 381, 442, 714, 897, 966, 1036, 1236, 1420
Sau96I	GGNCC	4 cut(s)	46, 737, 1059, 1060
SchI	GAGTC	4 cut(s)	331, 506, 576, 1363
ScrFI	CCNGG	2 cut(s)	39, 668
SduI	GDGCHC	4 cut(s)	408, 453, 675, 1063
SfaNI	GCATC	3 cut(s)	213, 289, 860
Sfr274I	CTCGAG	2 cut(s)	674, 911
SfuI	TTCGAA	1 cut(s)	956
SgrAI	CRCCGGYG	1 cut(s)	721
SinI	GGWCC	1 cut(s)	737
SlaI	CTCGAG	2 cut(s)	674, 911
SmiMI	CAYNNNNRTG	2 cut(s)	362, 377
SmlI	CTYRAG	2 cut(s)	674, 911
SmoI	CTYRAG	2 cut(s)	674, 911
Sse9I	AATT	3 cut(s)	128, 1223, 1425
SsiI	CCGC	4 cut(s)	141, 440, 1091, 1263
SspMI	CTAG	3 cut(s)	411, 564, 1406
SstI	GAGCTC	1 cut(s)	675
StyD4I	CCNGG	2 cut(s)	37, 666
StyI	CCWWGG	3 cut(s)	171, 238, 642
TaaI	ACNGT	3 cut(s)	64, 710, 1068
TaiI	ACGT	8 cut(s)	159, 294, 390, 420, 478, 665, 753, 1169
TasI	AATT	3 cut(s)	128, 1223, 1425
TfiI	GAWTC	2 cut(s)	688, 925
Tru1I	TTAA	1 cut(s)	657
Tru9I	TTAA	1 cut(s)	657
TseFI	GTSAC	1 cut(s)	304
TseI	GCWGC	4 cut(s)	150, 199, 437, 560
Tsp45I	GTSAC	1 cut(s)	304
TspDTI	ATGAA	7 cut(s)	16, 17, 97, 140, 259, 495, 1383
TspGWI	ACGGA	2 cut(s)	822, 1004
VpaK11BI	GGWCC	1 cut(s)	737
XapI	RAATTY	2 cut(s)	128, 1425
XceI	RCATGY	1 cut(s)	367
XcmI	CCANNNNNNNNNTGG	1 cut(s)	649
XhoI	CTCGAG	2 cut(s)	674, 911
XmiI	GTMKAC	2 cut(s)	159, 180
XmnI	GAANNNNTTC	1 cut(s)	1017
XspI	CTAG	3 cut(s)	411, 564, 1406
ZraI	GACGTC	1 cut(s)	157

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.