Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

31084592 .. 31086465

Gene Structure 1874 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g39330.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGAAGAGAGCTGCAGAGCTGGTGTTCATCCCCTGCGCCGGCGTTGGCCACCTCATATCGGCGGTAGAGACCGCAAAGCTCCTCGTGTCTCGAGACGACCGCCTCTTCATCACCGTCGTCGTTATGAAGACCCCCTTCGACTCCAAAGGCAACGATGCTTGTATAGAGTACTGCATCACGCAAGCCTCGGATCGCATCAAGTTCGTCAACGTTGCACAGCCCGACGTCGACTTCATAAACATGACTCGCAGCGGCTTCCGCAACTCGTTCATCGAAAGCCACAAACCCTACGTCAGAGATGCCGTCACCGAACTCCTCACCGGATCGTCCAAGTCACCAACCCCTCAACTCGCCGGGTTCGTCATCGACATGTTCTGCACCACCATGATCGACGTGGCCAACGAGTTCGGGGTTCCTACGTACATCTTCTTCACCTGCAACGCTGGCTTTCTAGGGCTTCTGTTCCACCTCCAGATGATCCACGACGAGTATGACGTGGACATCGCCGACTTGAAAGACTCGGATTCCGAGTTGATCCTCCCGAGTTTTGTTAACCCGGTACCTATCAAATCCCTGTCGAGTGTATTTTTTGAGAAAGAAGAGCCCATCCCATTCGTAAGCCACGCAAGAAGGTTCAGAGAGACAAAGGGTATTTTGATAAATACCTTCTCGGATCTGGAACCTCATGCCCTTCGCTCTCTTGATTCTTATGGGAATATTCCGCCGGTGTTTCCAGTGGGACCACTTCTGAAAGAGGAAAGTGACGATAATAACCTTGGGGGGTCAGATCAGGCCCTTCAGAAGTCAGAGATCTTGAAATGGCTTGATGACCGGCTTCCATCGTCGGTTGTGTTCTTGTGCTTTGGGAGCATGGGAAGCTTTGGTGAGGATCAAGTGAAAGAAATTGCCTGCGCGCTGGAGCAGAGTGGGCACTCGTTCTTGTGGTCCATACGTTGCCCCCCACCGAAGGAAAAAATTACTCACCCCAGCGACTATGCCGATCCCACGGCCATCTTACCCGACGGATTTCTCCAACGGACCGCTGGGATCGGGAAGGTCATAGGATGGGCTCCTCAAGTGGCGGTGTTGGCCCATCCAGCCGTGGGAGGTTTTGTCTCCCATTGCGGGTGGAATTCGGTACTCGAGAGTGTGTGGTTCGGTGTGCCTATTGCTACTTGGCCGATGTACTCGGAGCAACAAATGAATGCGTTTGAGATGGTGGTGGAATTAGAATTGGCGGTGAAGATTAGTGTAGAGTATGGATGGGACTTTTATAACACCGGTCTTGAAGGGCAAATGGTCTTGAGTGCACAAGAGATAGAAAGAGGAATAAGGGAGGTGATGGAGCATGATAGTGATACAAGGAAGAGGGTGAAAGAGATGAGTGCAATGAGCAAGAAAGCCTTGATGGATGGTGGTTCTTCCTATTCTTCATTGGGACTTTTTCTTGATCAGATATTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

489

Amino Acids

54.16

Weight (kDa)

4.88

Isoelectric Point (pI)

46.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	282 - 408	1.1e-23	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1275
AarI	CACCTGC	1 cut(s)	443
AatII	GACGTC	1 cut(s)	228
Acc36I	ACCTGC	1 cut(s)	443
Acc65I	GGTACC	1 cut(s)	559
AccB1I	GGYRCC	1 cut(s)	559
AccI	GTMKAC	1 cut(s)	228
AccII	CGCG	1 cut(s)	914
AclI	AACGTT	1 cut(s)	210
AclWI	GGATC	8 cut(s)	198, 331, 472, 529, 681, 897, 995, 1055
AcoI	YGGCCR	4 cut(s)	46, 396, 1008, 1178
AcsI	RAATTY	1 cut(s)	1132
AcuI	CTGAAG	1 cut(s)	782
AcyI	GRCGYC	1 cut(s)	225
AfaI	GTAC	5 cut(s)	170, 422, 561, 1140, 1187
AfiI	CCNNNNNNNGG	5 cut(s)	38, 58, 967, 1103, 1125
AflIII	ACRYGT	1 cut(s)	369
AgeI	ACCGGT	1 cut(s)	1280
AgsI	TTSAA	3 cut(s)	514, 817, 1289
AjiI	CACGTC	2 cut(s)	394, 496
AluBI	AGCT	4 cut(s)	11, 19, 79, 879
AluI	AGCT	4 cut(s)	11, 19, 79, 879
Alw21I	GWGCWC	1 cut(s)	1312
Alw26I	GTCTC	5 cut(s)	62, 87, 93, 635, 1120
Alw44I	GTGCAC	1 cut(s)	1308
AlwI	GGATC	8 cut(s)	198, 331, 472, 529, 681, 897, 995, 1055
Ama87I	CYCGRG	3 cut(s)	90, 541, 1142
AoxI	GGCC	6 cut(s)	46, 396, 792, 1008, 1089, 1178
ApaLI	GTGCAC	1 cut(s)	1308
ApeKI	GCWGC	2 cut(s)	11, 249
ApoI	RAATTY	1 cut(s)	1132
ArsI	GACNNNNNNTTYG	2 cut(s)	276, 308
AsiGI	ACCGGT	1 cut(s)	1280
Asp718I	GGTACC	1 cut(s)	559
AspLEI	GCGC	3 cut(s)	38, 914, 916
AspS9I	GGNCC	5 cut(s)	740, 793, 945, 1038, 1090
AsuC2I	CCSGG	2 cut(s)	355, 557
AvaI	CYCGRG	3 cut(s)	90, 541, 1142
AvaII	GGWCC	3 cut(s)	740, 945, 1038
BaeGI	GKGCMC	2 cut(s)	933, 1312
BalI	TGGCCA	2 cut(s)	48, 398
BanI	GGYRCC	1 cut(s)	559
BanII	GRGCYC	2 cut(s)	606, 1072
BarI	GAAGNNNNNNTAC	2 cut(s)	413, 445
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	134
Bbv12I	GWGCWC	1 cut(s)	1312
BbvI	GCAGC	1 cut(s)	261
BceAI	ACGGC	3 cut(s)	287, 1023, 1085
BcgI	CGANNNNNNTGC	2 cut(s)	184, 218
BclI	TGATCA	1 cut(s)	1450
BcnI	CCSGG	2 cut(s)	355, 557
BcoDI	GTCTC	5 cut(s)	62, 87, 93, 635, 1120
BfaI	CTAG	1 cut(s)	452
BfmI	CTRYAG	1 cut(s)	12
BfuAI	ACCTGC	1 cut(s)	443
BglII	AGATCT	1 cut(s)	810
BisI	GCNGC	3 cut(s)	12, 250, 253
BlsI	GCNGC	3 cut(s)	13, 251, 254
BmcAI	AGTACT	1 cut(s)	170
Bme1390I	CCNGG	2 cut(s)	355, 557
Bme18I	GGWCC	3 cut(s)	740, 945, 1038
BmeT110I	CYCGRG	3 cut(s)	90, 541, 1142
BmgBI	CACGTC	2 cut(s)	394, 496
BmgT120I	GGNCC	5 cut(s)	740, 793, 945, 1038, 1090
BmiI	GGNNCC	5 cut(s)	414, 561, 681, 741, 1071
BmrFI	CCNGG	2 cut(s)	355, 557
BmsI	GCATC	4 cut(s)	145, 183, 204, 289
BpiI	GAAGAC	1 cut(s)	134
BpmI	CTGGAG	2 cut(s)	455, 938
BpuEI	CTTGAG	2 cut(s)	1059, 1324
BpuMI	CCSGG	2 cut(s)	355, 557
BsaAI	YACGTR	1 cut(s)	420
BsaHI	GRCGYC	1 cut(s)	225
BsaI	GGTCTC	1 cut(s)	62
BsaJI	CCNNGG	4 cut(s)	186, 775, 1005, 1101
BsaWI	WCCGGW	2 cut(s)	320, 1280
BsaXI	ACNNNNNCTCC	2 cut(s)	1098, 1128
Bsc4I	CCNNNNNNNGG	5 cut(s)	38, 58, 967, 1103, 1125
Bse118I	RCCGGY	4 cut(s)	38, 724, 831, 1280
Bse1I	ACTGG	1 cut(s)	734
Bse3DI	GCAATG	2 cut(s)	1120, 1395
BseDI	CCNNGG	4 cut(s)	186, 775, 1005, 1101
BseGI	GGATG	6 cut(s)	27, 606, 1070, 1093, 1268, 1417
BseLI	CCNNNNNNNGG	5 cut(s)	38, 58, 967, 1103, 1125
BseMI	GCAATG	2 cut(s)	1120, 1395
BseNI	ACTGG	1 cut(s)	734
BsePI	GCGCGC	1 cut(s)	912
BseRI	GAGGAG	3 cut(s)	71, 305, 1062
BseSI	GKGCMC	2 cut(s)	933, 1312
BseXI	GCAGC	1 cut(s)	261
BseYI	CCCAGC	2 cut(s)	986, 1043
BsgI	GTGCAG	1 cut(s)	361
Bsh1236I	CGCG	1 cut(s)	914
Bsh1285I	CGRYCG	1 cut(s)	100
BshFI	GGCC	6 cut(s)	48, 398, 794, 1010, 1091, 1180
BshNI	GGYRCC	1 cut(s)	559
BshTI	ACCGGT	1 cut(s)	1280
BsiEI	CGRYCG	1 cut(s)	100
BsiHKAI	GWGCWC	1 cut(s)	1312
BsiHKCI	CYCGRG	3 cut(s)	90, 541, 1142
BsiSI	CCGG	7 cut(s)	39, 321, 354, 557, 725, 832, 1281
BslFI	GGGAC	3 cut(s)	753, 1280, 1452
BslI	CCNNNNNNNGG	5 cut(s)	38, 58, 967, 1103, 1125
BsmAI	GTCTC	5 cut(s)	62, 87, 93, 635, 1120
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	3 cut(s)	753, 1280, 1452
BsmI	GAATGC	1 cut(s)	1210
BsnI	GGCC	6 cut(s)	48, 398, 794, 1010, 1091, 1180
Bso31I	GGTCTC	1 cut(s)	62
BsoBI	CYCGRG	3 cut(s)	90, 541, 1142
Bsp1286I	GDGCHC	4 cut(s)	606, 933, 1072, 1312
BspANI	GGCC	6 cut(s)	48, 398, 794, 1010, 1091, 1180
BspFNI	CGCG	1 cut(s)	914
BspLI	GGNNCC	5 cut(s)	414, 561, 681, 741, 1071
BspMAI	CTGCAG	1 cut(s)	16
BspMI	ACCTGC	1 cut(s)	443
BspPI	GGATC	8 cut(s)	198, 331, 472, 529, 681, 897, 995, 1055
BspQI	GCTCTTC	1 cut(s)	594
BspT107I	GGYRCC	1 cut(s)	559
BspTNI	GGTCTC	1 cut(s)	62
BsrDI	GCAATG	2 cut(s)	1120, 1395
BsrFI	RCCGGY	4 cut(s)	38, 724, 831, 1280
BsrI	ACTGG	1 cut(s)	734
BssAI	RCCGGY	4 cut(s)	38, 724, 831, 1280
BssECI	CCNNGG	4 cut(s)	186, 775, 1005, 1101
BssHII	GCGCGC	1 cut(s)	912
BssNI	GRCGYC	1 cut(s)	225
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	1 cut(s)	775
Bst2BI	CACGAG	1 cut(s)	83
Bst4CI	ACNGT	1 cut(s)	115
Bst6I	CTCTTC	3 cut(s)	110, 594, 1361
BstACI	GRCGYC	1 cut(s)	225
BstBAI	YACGTR	1 cut(s)	420
BstC8I	GCNNGC	5 cut(s)	40, 183, 445, 910, 914
BstDSI	CCRYGG	2 cut(s)	1005, 1101
BstF5I	GGATG	6 cut(s)	27, 606, 1070, 1093, 1268, 1417
BstFNI	CGCG	1 cut(s)	914
BstHHI	GCGC	3 cut(s)	38, 914, 916
BstMAI	GTCTC	5 cut(s)	62, 87, 93, 635, 1120
BstMCI	CGRYCG	1 cut(s)	100
BstMWI	GCNNNNNNNGC	7 cut(s)	258, 444, 867, 876, 928, 1088, 1097
BstNSI	RCATGY	1 cut(s)	373
BstSCI	CCNGG	2 cut(s)	353, 555
BstSFI	CTRYAG	1 cut(s)	12
BstSLI	GKGCMC	2 cut(s)	933, 1312
BstSNI	TACGTA	1 cut(s)	420
BstUI	CGCG	1 cut(s)	914
BstV1I	GCAGC	1 cut(s)	261
BstV2I	GAAGAC	1 cut(s)	134
BstX2I	RGATCY	2 cut(s)	673, 810
BstYI	RGATCY	2 cut(s)	673, 810
BsuRI	GGCC	6 cut(s)	48, 398, 794, 1010, 1091, 1180
BtgI	CCRYGG	2 cut(s)	1005, 1101
BtgZI	GCGATG	1 cut(s)	487
BtrI	CACGTC	2 cut(s)	394, 496
BtsCI	GGATG	6 cut(s)	27, 606, 1070, 1093, 1268, 1417
BtsIMutI	CAGTG	1 cut(s)	741
BveI	ACCTGC	1 cut(s)	443
Cac8I	GCNNGC	5 cut(s)	40, 183, 445, 910, 914
CfoI	GCGC	3 cut(s)	38, 914, 916
Cfr10I	RCCGGY	4 cut(s)	38, 724, 831, 1280
Cfr13I	GGNCC	5 cut(s)	740, 793, 945, 1038, 1090
CpoI	CGGWCCG	1 cut(s)	1038
Csp6I	GTAC	5 cut(s)	169, 421, 560, 1139, 1186
CspAI	ACCGGT	1 cut(s)	1280
CspI	CGGWCCG	1 cut(s)	1038
CviAII	CATG	6 cut(s)	241, 370, 385, 686, 871, 1349
CviQI	GTAC	5 cut(s)	169, 421, 560, 1139, 1186
EaeI	YGGCCR	4 cut(s)	46, 396, 1008, 1178
Eam1104I	CTCTTC	3 cut(s)	110, 594, 1361
EarI	CTCTTC	3 cut(s)	110, 594, 1361
EciI	GGCGGA	1 cut(s)	711
Eco105I	TACGTA	1 cut(s)	420
Eco130I	CCWWGG	1 cut(s)	775
Eco24I	GRGCYC	2 cut(s)	606, 1072
Eco31I	GGTCTC	1 cut(s)	62
Eco47I	GGWCC	3 cut(s)	740, 945, 1038
Eco57I	CTGAAG	1 cut(s)	782
Eco88I	CYCGRG	3 cut(s)	90, 541, 1142
EcoO109I	RGGNCCY	1 cut(s)	793
EcoRI	GAATTC	1 cut(s)	1132
EcoT14I	CCWWGG	1 cut(s)	775
EcoT38I	GRGCYC	2 cut(s)	606, 1072
ErhI	CCWWGG	1 cut(s)	775
Esp3I	CGTCTC	1 cut(s)	87
FaeI	CATG	6 cut(s)	244, 373, 388, 689, 874, 1352
FalI	AAGNNNNNCTT	4 cut(s)	119, 151, 1388, 1420
FaqI	GGGAC	3 cut(s)	753, 1280, 1452
FatI	CATG	6 cut(s)	240, 369, 384, 685, 870, 1348
FauI	CCCGC	1 cut(s)	1118
FbaI	TGATCA	1 cut(s)	1450
FblI	GTMKAC	1 cut(s)	228
Fnu4HI	GCNGC	3 cut(s)	12, 250, 253
FokI	GGATG	6 cut(s)	14, 593, 1077, 1080, 1275, 1424
FriOI	GRGCYC	2 cut(s)	606, 1072
Fsp4HI	GCNGC	3 cut(s)	12, 250, 253
FspBI	CTAG	1 cut(s)	452
GlaI	GCGC	3 cut(s)	37, 913, 915
GluI	GCNGC	3 cut(s)	12, 250, 253
GsaI	CCCAGC	2 cut(s)	990, 1047
GsuI	CTGGAG	2 cut(s)	455, 938
HaeIII	GGCC	6 cut(s)	48, 398, 794, 1010, 1091, 1180
HapII	CCGG	7 cut(s)	39, 321, 354, 557, 725, 832, 1281
HhaI	GCGC	3 cut(s)	38, 914, 916
Hin1I	GRCGYC	1 cut(s)	225
Hin1II	CATG	6 cut(s)	244, 373, 388, 689, 874, 1352
Hin6I	GCGC	3 cut(s)	36, 912, 914
HinP1I	GCGC	3 cut(s)	36, 912, 914
HincII	GTYRAC	3 cut(s)	208, 229, 553
HindII	GTYRAC	3 cut(s)	208, 229, 553
HindIII	AAGCTT	1 cut(s)	877
HinfI	GANTC	5 cut(s)	140, 244, 518, 524, 704
HpaI	GTTAAC	1 cut(s)	553
HpaII	CCGG	7 cut(s)	39, 321, 354, 557, 725, 832, 1281
Hpy166II	GTNNAC	5 cut(s)	208, 229, 499, 553, 1310
Hpy8I	GTNNAC	5 cut(s)	208, 229, 499, 553, 1310
Hpy99I	CGWCG	8 cut(s)	119, 122, 227, 230, 395, 488, 847, 1025
HpyAV	CCTTC	8 cut(s)	145, 624, 676, 701, 806, 961, 1048, 1283
HpyCH4III	ACNGT	1 cut(s)	115
HpyCH4IV	ACGT	7 cut(s)	210, 225, 291, 393, 419, 495, 952
HpyCH4V	TGCA	7 cut(s)	14, 174, 215, 378, 438, 1310, 1388
HpyF10VI	GCNNNNNNNGC	7 cut(s)	258, 444, 867, 876, 928, 1088, 1097
HpySE526I	ACGT	7 cut(s)	210, 225, 291, 393, 419, 495, 952
Hsp92I	GRCGYC	1 cut(s)	225
Hsp92II	CATG	6 cut(s)	244, 373, 388, 689, 874, 1352
HspAI	GCGC	3 cut(s)	36, 912, 914
KpnI	GGTACC	1 cut(s)	563
KroI	GCCGGC	1 cut(s)	38
KroNI	GCCGGC	1 cut(s)	40
Ksp22I	TGATCA	1 cut(s)	1450
KspAI	GTTAAC	1 cut(s)	553
LguI	GCTCTTC	1 cut(s)	594
LmnI	GCTCC	6 cut(s)	84, 867, 919, 1075, 1192, 1345
Lsp1109I	GCAGC	1 cut(s)	261
LweI	GCATC	4 cut(s)	145, 183, 204, 289
MaeI	CTAG	1 cut(s)	452
MaeII	ACGT	7 cut(s)	210, 225, 291, 393, 419, 495, 952
MaeIII	GTNAC	3 cut(s)	304, 333, 761
MflI	RGATCY	2 cut(s)	673, 810
MhlI	GDGCHC	4 cut(s)	606, 933, 1072, 1312
MlsI	TGGCCA	2 cut(s)	48, 398
MluCI	AATT	5 cut(s)	903, 975, 1132, 1226, 1232
MluNI	TGGCCA	2 cut(s)	48, 398
MlyI	GAGTC	3 cut(s)	134, 238, 512
MmeI	TCCRAC	1 cut(s)	1057
Mox20I	TGGCCA	2 cut(s)	48, 398
MreI	CGCCGGCG	1 cut(s)	38
MroNI	GCCGGC	1 cut(s)	38
MscI	TGGCCA	2 cut(s)	48, 398
MseI	TTAA	1 cut(s)	552
MslI	CAYNNNNRTG	4 cut(s)	239, 368, 383, 1353
Msp20I	TGGCCA	2 cut(s)	48, 398
MspA1I	CMGCKG	2 cut(s)	252, 1043
MspI	CCGG	7 cut(s)	39, 321, 354, 557, 725, 832, 1281
MspR9I	CCNGG	2 cut(s)	355, 557
Mva1269I	GAATGC	1 cut(s)	1210
MvnI	CGCG	1 cut(s)	914
MwoI	GCNNNNNNNGC	7 cut(s)	258, 444, 867, 876, 928, 1088, 1097
NaeI	GCCGGC	1 cut(s)	40
NciI	CCSGG	2 cut(s)	355, 557
NgoMIV	GCCGGC	1 cut(s)	38
NlaIII	CATG	6 cut(s)	244, 373, 388, 689, 874, 1352
NlaIV	GGNNCC	5 cut(s)	414, 561, 681, 741, 1071
NmuCI	GTSAC	3 cut(s)	304, 333, 761
NspI	RCATGY	1 cut(s)	373
PaeR7I	CTCGAG	2 cut(s)	90, 1142
PaqCI	CACCTGC	1 cut(s)	443
PauI	GCGCGC	1 cut(s)	912
PciI	ACATGT	1 cut(s)	369
PciSI	GCTCTTC	1 cut(s)	594
PcsI	WCGNNNNNNNCGW	3 cut(s)	357, 399, 492
PctI	GAATGC	1 cut(s)	1210
PdiI	GCCGGC	1 cut(s)	40
PfeI	GAWTC	2 cut(s)	524, 704
PinAI	ACCGGT	1 cut(s)	1280
PkrI	GCNGC	3 cut(s)	13, 251, 254
PleI	GAGTC	3 cut(s)	134, 238, 512
PpsI	GAGTC	3 cut(s)	134, 238, 512
Ppu21I	YACGTR	1 cut(s)	420
PscI	ACATGT	1 cut(s)	369
PsiI	TTATAA	1 cut(s)	1275
Psp1406I	AACGTT	1 cut(s)	210
PspFI	CCCAGC	2 cut(s)	986, 1043
PspN4I	GGNNCC	5 cut(s)	414, 561, 681, 741, 1071
PspPI	GGNCC	5 cut(s)	740, 793, 945, 1038, 1090
PstI	CTGCAG	1 cut(s)	16
PsuI	RGATCY	2 cut(s)	673, 810
PteI	GCGCGC	1 cut(s)	912
RsaI	GTAC	5 cut(s)	170, 422, 561, 1140, 1187
RsaNI	GTAC	5 cut(s)	169, 421, 560, 1139, 1186
RseI	CAYNNNNRTG	4 cut(s)	239, 368, 383, 1353
Rsr2I	CGGWCCG	1 cut(s)	1038
RsrII	CGGWCCG	1 cut(s)	1038
SalI	GTCGAC	1 cut(s)	227
SapI	GCTCTTC	1 cut(s)	594
SaqAI	TTAA	1 cut(s)	552
SatI	GCNGC	3 cut(s)	12, 250, 253
Sau96I	GGNCC	5 cut(s)	740, 793, 945, 1038, 1090
ScaI	AGTACT	1 cut(s)	170
SchI	GAGTC	3 cut(s)	134, 238, 512
ScrFI	CCNGG	2 cut(s)	355, 557
SduI	GDGCHC	4 cut(s)	606, 933, 1072, 1312
SfaNI	GCATC	4 cut(s)	145, 183, 204, 289
SfcI	CTRYAG	1 cut(s)	12
Sfr274I	CTCGAG	2 cut(s)	90, 1142
SgrAI	CRCCGGYG	2 cut(s)	38, 724
SinI	GGWCC	3 cut(s)	740, 945, 1038
SlaI	CTCGAG	2 cut(s)	90, 1142
SmiMI	CAYNNNNRTG	4 cut(s)	239, 368, 383, 1353
SmlI	CTYRAG	4 cut(s)	90, 1074, 1142, 1303
SmoI	CTYRAG	4 cut(s)	90, 1074, 1142, 1303
SnaBI	TACGTA	1 cut(s)	420
Sse9I	AATT	5 cut(s)	903, 975, 1132, 1226, 1232
SspI	AATATT	1 cut(s)	718
SspMI	CTAG	1 cut(s)	452
StyD4I	CCNGG	2 cut(s)	353, 555
StyI	CCWWGG	1 cut(s)	775
TaaI	ACNGT	1 cut(s)	115
TaiI	ACGT	7 cut(s)	213, 228, 294, 396, 422, 498, 955
TaqI	TCGA	8 cut(s)	91, 138, 228, 273, 366, 390, 578, 1143
TasI	AATT	5 cut(s)	903, 975, 1132, 1226, 1232
TatI	WGTACW	2 cut(s)	168, 1185
TauI	GCSGC	1 cut(s)	255
TfiI	GAWTC	2 cut(s)	524, 704
Tru1I	TTAA	1 cut(s)	552
Tru9I	TTAA	1 cut(s)	552
TscAI	CASTG	1 cut(s)	741
TseFI	GTSAC	3 cut(s)	304, 333, 761
TseI	GCWGC	2 cut(s)	11, 249
Tsp45I	GTSAC	3 cut(s)	304, 333, 761
TspDTI	ATGAA	8 cut(s)	16, 17, 97, 140, 223, 259, 1217, 1422
TspGWI	ACGGA	2 cut(s)	1038, 1051
TspRI	CASTG	1 cut(s)	741
VneI	GTGCAC	1 cut(s)	1308
VpaK11BI	GGWCC	3 cut(s)	740, 945, 1038
XapI	RAATTY	1 cut(s)	1132
XceI	RCATGY	1 cut(s)	373
XcmI	CCANNNNNNNNNTGG	2 cut(s)	391, 1040
XhoI	CTCGAG	2 cut(s)	90, 1142
XmiI	GTMKAC	1 cut(s)	228
XspI	CTAG	1 cut(s)	452
ZraI	GACGTC	1 cut(s)	226
ZrmI	AGTACT	1 cut(s)	170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.