Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

11062200 .. 11063618

Gene Structure 1419 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1141500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGAAGAGACCAGCACAACTAGTGTTCGTTCCCGCCCCAGGCATCATCGGCCACATGGTACCAACGGTCGAGATGGCAAAGCAACTCGTTGCTCGGGACGACCAACTGTTTATCACAGTCCTCGTCATGAAGCTTCCCTACGCCCAACCATTCACCAACACTGATTCTTCAATCTCTCACCGCATCGACTTCGTCAACCTCCCAGAAGCCCAATCGGACAAACAAGACACTGTCCCCAATCCCGGGTCCTTCTTAAGAATGCTCGTCGAAAATCACACATCTCACGTCAGAGACGCCGTTATCAACTTACTCCCCGAGTCAGATCAGTCTGAGTCGACGTCGAAGCCTCGGCTTGCCGGGTTCGTGCTCGACATGTTTTGCGCAAGCCTAATGGACGTGGCCAACGAATTTAAGGTTCCCTCCTACCTGTTCTTCACCTCCAACGCTTCGACTCTCGCACTTATGTTCCATTTTCAATCGCTTCGTGACGAGGGGGGAATAGATATAACTGAGTTGACGAGCTCAACCGCTGAGTTGGCCGTCCCGAGTTTCATCAACCCTTACCCTGCCTCTGTCTTGCCTGGTTCGTTTCTGGACAAGGAGAGCACCAAAACAATCCTCGACTCCGTCAACAGGTTTAAACAAACCAAGGGTATTTTGGTTAATACATTCATGGAGCTAGAATCGCCTGCTCTTCATTATCTTGATTCTGGTGATAAAATCCCACCGGTGTATCCGGTGGGACCCTTATTGAACCTCAAAAGTAGTGATGAAGATAAGGTCTCGGATATCTTGAGGTGGCTTGATGATCAGCCTCCTTTCTCGGTGGTGTTCCTGTGTTTTGGAAGCATGGGAAGTTTCGGTGAGGCCCAGGTGAATGAGATAGCGTGCGCGCTAGAGCACAGCGGACATCGGTTTTTGTGGTCCCTACGCCGGCCCCCACCTAAAGGCAAGAGAGCTATGCCAAGCGACTACGAGGATCCAAAGGCAGTCTTGCCCGAAGGGTTTCTTGATCGGACGGCTACGGTTGGGAAGGTGATTGGTTGGGCCCCGCAAGCGGCCATTCTAGGCCATCCGGCAACCGGAGCGTTTGTATCACATTGCGGGTGGAATTCTACGTTGGAAAGCTTATGGAATGGCGTGCCGATTGCCGCATGGCCAATGTACGCGGAGCAAAACCTGAATGCCTTTCAATTGGTGAAGGAGTTGGGACTGTCAGTGGAGATTAAGATGGATTATAGGAAGGACAGCGACGTGGTGGTGAGCGCAGAAGACATAGAAAGAGGGATAAGGCGAGTGATGGAGCTTGACAGTGATGTAAGGAAAAGAGTGAAGGAGATGAGTGAAAAGAGCAAGAAAGCCTTGGTGGATGGTGGTTCTTCTTACTCTTCATTAGGGCGTTTTATTGATCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

473

Amino Acids

52.23

Weight (kDa)

5.32

Isoelectric Point (pI)

50.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	276 - 419	8.6e-25	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	341
Acc16I	TGCGCA	1 cut(s)	382
Acc65I	GGTACC	1 cut(s)	58
AccB1I	GGYRCC	1 cut(s)	58
AccI	GTMKAC	1 cut(s)	335
AccII	CGCG	2 cut(s)	893, 1169
AciI	CCGC	9 cut(s)	33, 181, 528, 906, 1052, 1058, 1104, 1152, 1169
AclWI	GGATC	2 cut(s)	974, 987
AcoI	YGGCCR	5 cut(s)	49, 399, 537, 1059, 1157
AcsI	RAATTY	3 cut(s)	407, 1111, 1413
AcyI	GRCGYC	2 cut(s)	294, 338
AfaI	GTAC	2 cut(s)	60, 1166
AfiI	CCNNNNNNNGG	8 cut(s)	38, 242, 243, 633, 933, 947, 1057, 1082
AflII	CTTAAG	1 cut(s)	253
AflIII	ACRYGT	1 cut(s)	372
AgeI	ACCGGT	1 cut(s)	727
AgsI	TTSAA	4 cut(s)	171, 476, 754, 1193
AhlI	ACTAGT	1 cut(s)	19
AjiI	CACGTC	3 cut(s)	286, 397, 1255
AjnI	CCWGG	3 cut(s)	37, 580, 870
AjuI	GAANNNNNNNTTGG	2 cut(s)	1103, 1135
AluBI	AGCT	6 cut(s)	133, 522, 679, 959, 1128, 1306
AluI	AGCT	6 cut(s)	133, 522, 679, 959, 1128, 1306
Alw21I	GWGCWC	4 cut(s)	369, 524, 608, 903
Alw26I	GTCTC	2 cut(s)	285, 787
AlwI	GGATC	2 cut(s)	974, 987
Ama87I	CYCGRG	4 cut(s)	93, 242, 314, 544
AoxI	GGCC	9 cut(s)	49, 399, 537, 867, 935, 1047, 1059, 1069, 1157
ApaI	GGGCCC	1 cut(s)	1051
ApoI	RAATTY	3 cut(s)	407, 1111, 1413
AsiGI	ACCGGT	1 cut(s)	727
Asp700I	GAANNNNTTC	1 cut(s)	1005
Asp718I	GGTACC	1 cut(s)	58
AspLEI	GCGC	4 cut(s)	383, 893, 895, 1268
AspS9I	GGNCC	7 cut(s)	246, 743, 868, 924, 936, 1047, 1048
AsuC2I	CCSGG	3 cut(s)	243, 244, 358
AsuHPI	GGTGA	9 cut(s)	145, 170, 427, 725, 875, 886, 1048, 1210, 1273
AvaI	CYCGRG	4 cut(s)	93, 242, 314, 544
AvaII	GGWCC	3 cut(s)	246, 743, 924
BaeGI	GKGCMC	1 cut(s)	1051
BaeI	ACNNNNGTAYC	2 cut(s)	716, 749
BalI	TGGCCA	2 cut(s)	401, 1159
BamHI	GGATCC	1 cut(s)	979
BanI	GGYRCC	1 cut(s)	58
BanII	GRGCYC	2 cut(s)	524, 1051
BarI	GAAGNNNNNNTAC	2 cut(s)	122, 154
BbsI	GAAGAC	1 cut(s)	1278
Bbv12I	GWGCWC	4 cut(s)	369, 524, 608, 903
BccI	CCATC	5 cut(s)	67, 1080, 1225, 1294, 1364
BceAI	ACGGC	3 cut(s)	281, 524, 1035
BcgI	CGANNNNNNTGC	2 cut(s)	172, 206
BciT130I	CCWGG	3 cut(s)	39, 582, 872
BciVI	GTATCC	1 cut(s)	744
BclI	TGATCA	2 cut(s)	808, 1408
BcnI	CCSGG	3 cut(s)	243, 244, 358
BcoDI	GTCTC	2 cut(s)	285, 787
BcuI	ACTAGT	1 cut(s)	19
BfaI	CTAG	4 cut(s)	20, 680, 896, 1067
BfrI	CTTAAG	1 cut(s)	253
BfuI	GTATCC	1 cut(s)	744
BisI	GCNGC	2 cut(s)	1059, 1152
BlsI	GCNGC	2 cut(s)	1060, 1153
Bme1390I	CCNGG	6 cut(s)	39, 243, 244, 358, 582, 872
Bme18I	GGWCC	3 cut(s)	246, 743, 924
BmeT110I	CYCGRG	4 cut(s)	93, 242, 314, 544
BmgBI	CACGTC	3 cut(s)	286, 397, 1255
BmgT120I	GGNCC	7 cut(s)	246, 743, 868, 924, 936, 1047, 1048
BmrFI	CCNGG	6 cut(s)	39, 243, 244, 358, 582, 872
BmsI	GCATC	2 cut(s)	51, 192
BpiI	GAAGAC	1 cut(s)	1278
BpuEI	CTTGAG	1 cut(s)	814
BpuMI	CCSGG	3 cut(s)	243, 244, 358
BsaHI	GRCGYC	2 cut(s)	294, 338
BsaI	GGTCTC	1 cut(s)	787
BsaJI	CCNNGG	6 cut(s)	37, 242, 347, 648, 870, 1362
BsaWI	WCCGGW	3 cut(s)	727, 736, 1082
BsaXI	ACNNNNNCTCC	2 cut(s)	1077, 1107
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 242, 243, 633, 933, 947, 1057, 1082
Bse118I	RCCGGY	2 cut(s)	727, 933
Bse3DI	GCAATG	1 cut(s)	1099
BseBI	CCWGG	3 cut(s)	39, 582, 872
BseDI	CCNNGG	6 cut(s)	37, 242, 347, 648, 870, 1362
BseGI	GGATG	2 cut(s)	1072, 1375
BseLI	CCNNNNNNNGG	8 cut(s)	38, 242, 243, 633, 933, 947, 1057, 1082
BseMI	GCAATG	1 cut(s)	1099
BseMII	CTCAG	3 cut(s)	321, 501, 522
BsePI	GCGCGC	1 cut(s)	891
BseSI	GKGCMC	1 cut(s)	1051
Bsh1236I	CGCG	2 cut(s)	893, 1169
Bsh1285I	CGRYCG	1 cut(s)	69
BshFI	GGCC	9 cut(s)	51, 401, 539, 869, 937, 1049, 1061, 1071, 1159
BshNI	GGYRCC	1 cut(s)	58
BshTI	ACCGGT	1 cut(s)	727
BsiEI	CGRYCG	1 cut(s)	69
BsiHKAI	GWGCWC	4 cut(s)	369, 524, 608, 903
BsiHKCI	CYCGRG	4 cut(s)	93, 242, 314, 544
BsiSI	CCGG	7 cut(s)	243, 357, 728, 737, 934, 1076, 1083
BslFI	GGGAC	6 cut(s)	110, 218, 527, 756, 910, 1224
BslI	CCNNNNNNNGG	8 cut(s)	38, 242, 243, 633, 933, 947, 1057, 1082
BsmAI	GTCTC	2 cut(s)	285, 787
BsmBI	CGTCTC	1 cut(s)	285
BsmFI	GGGAC	6 cut(s)	110, 218, 527, 756, 910, 1224
BsmI	GAATGC	2 cut(s)	264, 1189
BsnI	GGCC	9 cut(s)	51, 401, 539, 869, 937, 1049, 1061, 1071, 1159
Bso31I	GGTCTC	1 cut(s)	787
BsoBI	CYCGRG	4 cut(s)	93, 242, 314, 544
Bsp120I	GGGCCC	1 cut(s)	1047
Bsp1286I	GDGCHC	5 cut(s)	369, 524, 608, 903, 1051
Bsp143I	GATC	5 cut(s)	322, 808, 979, 1012, 1408
BspACI	CCGC	9 cut(s)	33, 181, 528, 906, 1052, 1058, 1104, 1152, 1169
BspANI	GGCC	9 cut(s)	51, 401, 539, 869, 937, 1049, 1061, 1071, 1159
BspCNI	CTCAG	3 cut(s)	322, 502, 523
BspFNI	CGCG	2 cut(s)	893, 1169
BspHI	TCATGA	1 cut(s)	126
BspPI	GGATC	2 cut(s)	974, 987
BspQI	GCTCTTC	1 cut(s)	699
BspT107I	GGYRCC	1 cut(s)	58
BspTI	CTTAAG	1 cut(s)	253
BspTNI	GGTCTC	1 cut(s)	787
BsrDI	GCAATG	1 cut(s)	1099
BsrFI	RCCGGY	2 cut(s)	727, 933
BssAI	RCCGGY	2 cut(s)	727, 933
BssECI	CCNNGG	6 cut(s)	37, 242, 347, 648, 870, 1362
BssHII	GCGCGC	1 cut(s)	891
BssMI	GATC	5 cut(s)	322, 808, 979, 1012, 1408
BssNI	GRCGYC	2 cut(s)	294, 338
BssT1I	CCWWGG	2 cut(s)	648, 1362
Bst2UI	CCWGG	3 cut(s)	39, 582, 872
Bst4CI	ACNGT	7 cut(s)	67, 108, 118, 232, 1027, 1215, 1313
Bst6I	CTCTTC	2 cut(s)	699, 1393
BstACI	GRCGYC	2 cut(s)	294, 338
BstAFI	CTTAAG	1 cut(s)	253
BstC8I	GCNNGC	8 cut(s)	354, 385, 690, 889, 893, 935, 1056, 1142
BstDEI	CTNAG	3 cut(s)	330, 510, 531
BstF5I	GGATG	2 cut(s)	1072, 1375
BstFNI	CGCG	2 cut(s)	893, 1169
BstHHI	GCGC	4 cut(s)	383, 893, 895, 1268
BstKTI	GATC	5 cut(s)	325, 811, 982, 1015, 1411
BstMAI	GTCTC	2 cut(s)	285, 787
BstMBI	GATC	5 cut(s)	322, 808, 979, 1012, 1408
BstMCI	CGRYCG	1 cut(s)	69
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 536, 685, 1055, 1085
BstNI	CCWGG	3 cut(s)	39, 582, 872
BstNSI	RCATGY	1 cut(s)	376
BstSCI	CCNGG	6 cut(s)	37, 241, 242, 356, 580, 870
BstSLI	GKGCMC	1 cut(s)	1051
BstUI	CGCG	2 cut(s)	893, 1169
BstV2I	GAAGAC	1 cut(s)	1278
BstX2I	RGATCY	1 cut(s)	979
BstYI	RGATCY	1 cut(s)	979
BsuI	GTATCC	1 cut(s)	744
BsuRI	GGCC	9 cut(s)	51, 401, 539, 869, 937, 1049, 1061, 1071, 1159
BtrI	CACGTC	3 cut(s)	286, 397, 1255
BtsCI	GGATG	2 cut(s)	1072, 1375
BtsIMutI	CAGTG	4 cut(s)	159, 228, 1224, 1318
Cac8I	GCNNGC	8 cut(s)	354, 385, 690, 889, 893, 935, 1056, 1142
CciI	TCATGA	1 cut(s)	126
CfoI	GCGC	4 cut(s)	383, 893, 895, 1268
Cfr10I	RCCGGY	2 cut(s)	727, 933
Cfr13I	GGNCC	7 cut(s)	246, 743, 868, 924, 936, 1047, 1048
Cfr9I	CCCGGG	1 cut(s)	242
CseI	GACGC	1 cut(s)	302
Csp6I	GTAC	2 cut(s)	59, 1165
CspAI	ACCGGT	1 cut(s)	727
CviAII	CATG	6 cut(s)	55, 127, 373, 673, 850, 1155
CviQI	GTAC	2 cut(s)	59, 1165
DdeI	CTNAG	3 cut(s)	330, 510, 531
DpnI	GATC	5 cut(s)	324, 810, 981, 1014, 1410
DpnII	GATC	5 cut(s)	322, 808, 979, 1012, 1408
DraI	TTTAAA	1 cut(s)	640
EaeI	YGGCCR	5 cut(s)	49, 399, 537, 1059, 1157
Eam1104I	CTCTTC	2 cut(s)	699, 1393
EarI	CTCTTC	2 cut(s)	699, 1393
Ecl136II	GAGCTC	1 cut(s)	522
Eco130I	CCWWGG	2 cut(s)	648, 1362
Eco24I	GRGCYC	2 cut(s)	524, 1051
Eco31I	GGTCTC	1 cut(s)	787
Eco32I	GATATC	1 cut(s)	790
Eco47I	GGWCC	3 cut(s)	246, 743, 924
Eco53kI	GAGCTC	1 cut(s)	522
Eco88I	CYCGRG	4 cut(s)	93, 242, 314, 544
EcoICRI	GAGCTC	1 cut(s)	522
EcoO109I	RGGNCCY	3 cut(s)	246, 743, 1048
EcoRI	GAATTC	1 cut(s)	1111
EcoRII	CCWGG	3 cut(s)	37, 580, 870
EcoRV	GATATC	1 cut(s)	790
EcoT14I	CCWWGG	2 cut(s)	648, 1362
EcoT38I	GRGCYC	2 cut(s)	524, 1051
ErhI	CCWWGG	2 cut(s)	648, 1362
Esp3I	CGTCTC	1 cut(s)	285
FaeI	CATG	6 cut(s)	58, 130, 376, 676, 853, 1158
FalI	AAGNNNNNCTT	6 cut(s)	977, 1009, 993, 1025, 1346, 1378
FaqI	GGGAC	6 cut(s)	110, 218, 527, 756, 910, 1224
FatI	CATG	6 cut(s)	54, 126, 372, 672, 849, 1154
FauI	CCCGC	3 cut(s)	40, 1059, 1097
FbaI	TGATCA	2 cut(s)	808, 1408
FblI	GTMKAC	1 cut(s)	335
Fnu4HI	GCNGC	2 cut(s)	1059, 1152
FokI	GGATG	2 cut(s)	1059, 1382
FriOI	GRGCYC	2 cut(s)	524, 1051
Fsp4HI	GCNGC	2 cut(s)	1059, 1152
FspBI	CTAG	4 cut(s)	20, 680, 896, 1067
FspI	TGCGCA	1 cut(s)	382
GlaI	GCGC	4 cut(s)	382, 892, 894, 1267
GluI	GCNGC	2 cut(s)	1059, 1152
HaeIII	GGCC	9 cut(s)	51, 401, 539, 869, 937, 1049, 1061, 1071, 1159
HapII	CCGG	7 cut(s)	243, 357, 728, 737, 934, 1076, 1083
HgaI	GACGC	1 cut(s)	302
HhaI	GCGC	4 cut(s)	383, 893, 895, 1268
Hin1I	GRCGYC	2 cut(s)	294, 338
Hin1II	CATG	6 cut(s)	58, 130, 376, 676, 853, 1158
Hin6I	GCGC	4 cut(s)	381, 891, 893, 1266
HinP1I	GCGC	4 cut(s)	381, 891, 893, 1266
HincII	GTYRAC	4 cut(s)	196, 336, 516, 631
HindII	GTYRAC	4 cut(s)	196, 336, 516, 631
HindIII	AAGCTT	2 cut(s)	131, 1126
HinfI	GANTC	7 cut(s)	164, 317, 332, 451, 623, 683, 707
HpaII	CCGG	7 cut(s)	243, 357, 728, 737, 934, 1076, 1083
HphI	GGTGA	9 cut(s)	145, 170, 427, 725, 875, 886, 1048, 1210, 1273
Hpy166II	GTNNAC	4 cut(s)	196, 336, 516, 631
Hpy188I	TCNGA	6 cut(s)	217, 290, 322, 331, 787, 1017
Hpy188III	TCNNGA	9 cut(s)	70, 95, 127, 485, 544, 593, 704, 793, 1010
Hpy8I	GTNNAC	4 cut(s)	196, 336, 516, 631
Hpy99I	CGWCG	4 cut(s)	269, 340, 343, 1256
HpyAV	CCTTC	6 cut(s)	259, 995, 1027, 1195, 1237, 1327
HpyCH4III	ACNGT	7 cut(s)	67, 108, 118, 232, 1027, 1215, 1313
HpyCH4IV	ACGT	5 cut(s)	285, 338, 396, 1118, 1254
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 536, 685, 1055, 1085
HpyF3I	CTNAG	3 cut(s)	330, 510, 531
HpySE526I	ACGT	5 cut(s)	285, 338, 396, 1118, 1254
Hsp92I	GRCGYC	2 cut(s)	294, 338
Hsp92II	CATG	6 cut(s)	58, 130, 376, 676, 853, 1158
HspAI	GCGC	4 cut(s)	381, 891, 893, 1266
KflI	GGGWCCC	1 cut(s)	743
KpnI	GGTACC	1 cut(s)	62
KroI	GCCGGC	1 cut(s)	933
KroNI	GCCGGC	1 cut(s)	935
Ksp22I	TGATCA	2 cut(s)	808, 1408
Kzo9I	GATC	5 cut(s)	322, 808, 979, 1012, 1408
LguI	GCTCTTC	1 cut(s)	699
LmnI	GCTCC	4 cut(s)	676, 1085, 1171, 1303
LweI	GCATC	2 cut(s)	51, 192
MaeI	CTAG	4 cut(s)	20, 680, 896, 1067
MaeII	ACGT	5 cut(s)	285, 338, 396, 1118, 1254
MaeIII	GTNAC	1 cut(s)	485
MalI	GATC	5 cut(s)	324, 810, 981, 1014, 1410
MboI	GATC	5 cut(s)	322, 808, 979, 1012, 1408
MboII	GAAGA	8 cut(s)	16, 159, 424, 686, 785, 1283, 1371, 1380
MfeI	CAATTG	1 cut(s)	1193
MflI	RGATCY	1 cut(s)	979
MhlI	GDGCHC	5 cut(s)	369, 524, 608, 903, 1051
MlsI	TGGCCA	2 cut(s)	401, 1159
MluCI	AATT	4 cut(s)	407, 1111, 1193, 1413
MluNI	TGGCCA	2 cut(s)	401, 1159
MlyI	GAGTC	4 cut(s)	326, 341, 445, 617
MmeI	TCCRAC	2 cut(s)	465, 1101
Mox20I	TGGCCA	2 cut(s)	401, 1159
MroNI	GCCGGC	1 cut(s)	933
MroXI	GAANNNNTTC	1 cut(s)	1005
MscI	TGGCCA	2 cut(s)	401, 1159
MseI	TTAA	6 cut(s)	254, 411, 639, 663, 1227, 1417
Msp20I	TGGCCA	2 cut(s)	401, 1159
MspA1I	CMGCKG	2 cut(s)	530, 906
MspCI	CTTAAG	1 cut(s)	253
MspI	CCGG	7 cut(s)	243, 357, 728, 737, 934, 1076, 1083
MspR9I	CCNGG	6 cut(s)	39, 243, 244, 358, 582, 872
MssI	GTTTAAAC	1 cut(s)	640
MunI	CAATTG	1 cut(s)	1193
Mva1269I	GAATGC	2 cut(s)	264, 1189
MvaI	CCWGG	3 cut(s)	39, 582, 872
MvnI	CGCG	2 cut(s)	893, 1169
MwoI	GCNNNNNNNGC	5 cut(s)	48, 536, 685, 1055, 1085
NaeI	GCCGGC	1 cut(s)	935
NciI	CCSGG	3 cut(s)	243, 244, 358
NdeII	GATC	5 cut(s)	322, 808, 979, 1012, 1408
NgoMIV	GCCGGC	1 cut(s)	933
NlaIII	CATG	6 cut(s)	58, 130, 376, 676, 853, 1158
NmeAIII	GCCGAG	1 cut(s)	328
NmuCI	GTSAC	1 cut(s)	485
NsbI	TGCGCA	1 cut(s)	382
NspI	RCATGY	1 cut(s)	376
PagI	TCATGA	1 cut(s)	126
PauI	GCGCGC	1 cut(s)	891
PciI	ACATGT	1 cut(s)	372
PciSI	GCTCTTC	1 cut(s)	699
PcsI	WCGNNNNNNNCGW	1 cut(s)	402
PctI	GAATGC	2 cut(s)	264, 1189
PdiI	GCCGGC	1 cut(s)	935
PdmI	GAANNNNTTC	1 cut(s)	1005
PfeI	GAWTC	3 cut(s)	164, 683, 707
PflFI	GACNNNGTC	3 cut(s)	191, 230, 626
PinAI	ACCGGT	1 cut(s)	727
PkrI	GCNGC	2 cut(s)	1060, 1153
PleI	GAGTC	4 cut(s)	325, 340, 445, 617
PmeI	GTTTAAAC	1 cut(s)	640
PpsI	GAGTC	4 cut(s)	325, 340, 445, 617
PpuMI	RGGWCCY	2 cut(s)	246, 743
PscI	ACATGT	1 cut(s)	372
Psp124BI	GAGCTC	1 cut(s)	524
Psp5II	RGGWCCY	2 cut(s)	246, 743
Psp6I	CCWGG	3 cut(s)	37, 580, 870
PspGI	CCWGG	3 cut(s)	37, 580, 870
PspOMI	GGGCCC	1 cut(s)	1047
PspPI	GGNCC	7 cut(s)	246, 743, 868, 924, 936, 1047, 1048
PspPPI	RGGWCCY	2 cut(s)	246, 743
PsuI	RGATCY	1 cut(s)	979
PsyI	GACNNNGTC	3 cut(s)	191, 230, 626
PteI	GCGCGC	1 cut(s)	891
RsaI	GTAC	2 cut(s)	60, 1166
RsaNI	GTAC	2 cut(s)	59, 1165
SacI	GAGCTC	1 cut(s)	524
SalI	GTCGAC	1 cut(s)	334
SapI	GCTCTTC	1 cut(s)	699
SaqAI	TTAA	6 cut(s)	254, 411, 639, 663, 1227, 1417
SatI	GCNGC	2 cut(s)	1059, 1152
Sau3AI	GATC	5 cut(s)	322, 808, 979, 1012, 1408
Sau96I	GGNCC	7 cut(s)	246, 743, 868, 924, 936, 1047, 1048
SchI	GAGTC	4 cut(s)	326, 341, 445, 617
ScrFI	CCNGG	6 cut(s)	39, 243, 244, 358, 582, 872
SduI	GDGCHC	5 cut(s)	369, 524, 608, 903, 1051
SfaNI	GCATC	2 cut(s)	51, 192
SgrAI	CRCCGGYG	1 cut(s)	727
SinI	GGWCC	3 cut(s)	246, 743, 924
SmaI	CCCGGG	1 cut(s)	244
SmlI	CTYRAG	2 cut(s)	253, 793
SmoI	CTYRAG	2 cut(s)	253, 793
SpeI	ACTAGT	1 cut(s)	19
Sse9I	AATT	4 cut(s)	407, 1111, 1193, 1413
SsiI	CCGC	9 cut(s)	33, 181, 528, 906, 1052, 1058, 1104, 1152, 1169
SspMI	CTAG	4 cut(s)	20, 680, 896, 1067
SstI	GAGCTC	1 cut(s)	524
StyD4I	CCNGG	6 cut(s)	37, 241, 242, 356, 580, 870
StyI	CCWWGG	2 cut(s)	648, 1362
TaaI	ACNGT	7 cut(s)	67, 108, 118, 232, 1027, 1215, 1313
TaiI	ACGT	5 cut(s)	288, 341, 399, 1121, 1257
TaqI	TCGA	8 cut(s)	69, 186, 267, 335, 341, 369, 449, 621
TasI	AATT	4 cut(s)	407, 1111, 1193, 1413
TauI	GCSGC	2 cut(s)	1061, 1154
TfiI	GAWTC	3 cut(s)	164, 683, 707
Tru1I	TTAA	6 cut(s)	254, 411, 639, 663, 1227, 1417
Tru9I	TTAA	6 cut(s)	254, 411, 639, 663, 1227, 1417
TscAI	CASTG	4 cut(s)	166, 235, 1224, 1318
TseFI	GTSAC	1 cut(s)	485
Tsp45I	GTSAC	1 cut(s)	485
TspDTI	ATGAA	7 cut(s)	17, 143, 541, 661, 686, 786, 1380
TspGWI	ACGGA	1 cut(s)	616
TspMI	CCCGGG	1 cut(s)	242
TspRI	CASTG	4 cut(s)	166, 235, 1224, 1318
Tth111I	GACNNNGTC	3 cut(s)	191, 230, 626
Vha464I	CTTAAG	1 cut(s)	253
VpaK11BI	GGWCC	3 cut(s)	246, 743, 924
XapI	RAATTY	3 cut(s)	407, 1111, 1413
XceI	RCATGY	1 cut(s)	376
XcmI	CCANNNNNNNNNTGG	1 cut(s)	655
XmaI	CCCGGG	1 cut(s)	242
XmiI	GTMKAC	1 cut(s)	335
XmnI	GAANNNNTTC	1 cut(s)	1005
XspI	CTAG	4 cut(s)	20, 680, 896, 1067
ZraI	GACGTC	1 cut(s)	339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.