Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

67760543 .. 67764222

Gene Structure 3680 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020697

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1713 bp

ATGGAGAAGCCTGCAGAGCTCGTGTTCGTCCCATCCCCTGGTATAGGCCACCTGGTTTCAACACTTGAGATTGCAAAGTTCCTCCTGTCTCGAGACGACCAACTCTTGATCACTGTCCTCATCATGCAGTTTCCCGCTATTTCCAAAGGCACTGATGCCTATGTCGAGTCATTTGCAGGCTCTTCTTCTCCCATATTACAGCGTATCAAGTTCATCAACCTCCCACATGTCAATACGGAACATACGGAAGGCAGTGTCCGCAATAGCTTGATCGGTTTCGTTGAAAGTCAGCAACCCCATGTTAAAGATGTCATCACAAAACTCAAAGAGTCCAAGACTCGGCTTGCCGGGTTTGTCGTCGACATGTTCTGTACGACTATGATCGACGTGGCCGACCAATTTGGGGTTCCTAGCTACGTGTTCTTCACTTCTGGCGCCGGCACGCTCGGGCTAGTATTCCACTTTCAAGCGCAGCGCGATCAATGCAGCAAGGACTGCACCGAGTTTAAAGACTCAGACGCTGAGTTGCTCATCCCGAGTTTTGTCAATCCCTTACCAGTTGCTAAAGTCTTACCTGGCAGGCTATTAGTGAAGGAGGCAGCGGAATCATTCCTCAACATTGTGAAAAGGTTTAGAGATACCAAGGGTATTTTGGTAAACACGTTCACAGACCTAGAATCGCATGCCCTTCATGCTCTTTCATCTGATCCAGAGATTCCTCCCGTATATCCGGTAGGACCCTTACTTAACCTGAATAGTAATGAAAGTCATGTGGATTCAGACGAGGCCAAGCAGAAGTATGATATCTTGAAATGGCTAGATGATCAGCCTCCATTGTCTGTAGTGTTCTTGTGCTTTGGAAGCATGGGAAGCTTTGGCGAGGACCAGGTGAAAGAGATCGCCCACGCCCTGGAGCACGCGGGCCATCGGTTCTTGTGGTCCTTACGCCGTCCGCCGCCCACAGGAAAAATTGCTTTTCCAAGTGACTACGACGACCACACCAGAGTCTTGCCCGAAGGGTTCCTCGATCGAACAGTTGGGATTGGAAAGGTCATAGGCTGGGCCCCGCAAGTTGCCGTCTTGGCTCACCCATCTGTGGGAGGATTTGTATCCCATTGTGGGTGGAATTCCACACTTGAGAGTCTTTGGCACGGTGTGCCCGTCGCCACATGGCCATTGTACGCAGAGCAACAGCTGAATGCATTTCAGCTGGTGAAGGAATTGGAATTGGCTGTGGAAATTGATATGAGCTACAGAAGTGAGAGTCCAGTTCTTGTGAGCGCGAAGGGGATAGAGAGAGGAATAAGAGAGGTGATGAAACTTGATAGTGATATAAGAAATAGAGTGAAAGAAATGAGTGAGAAGGGCAAGAAAGCTTTGATGGATGGCTCGAAATTTGCTCGCCTTGGACAACGAAACCATGGAGGGGGGGAGTCGGAGGAAGTCATCCAGGAGCCTGAGATAGAGATATGGTCGGTGGAATTGAGAGGAAGAGGAGAGAGTCAGAGATCCAGTTCAAGTCGGTGTCGGGCGACGGAGATCCAGTCCAGAAACGGCCTCTTGTGTCGGCGATTCAATTCCAGTTCTGGTTGCCGACGTGATGGTGGAGAGAGTGAGTACTTTGGCGGCGAGAGAGATATGGAGTATTTCGCCGGCAAGAGAGAGGGAGGAGAGAGTTTCGTCAAGGGAAGAGAGTGGAGAGTGAATGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

571

Amino Acids

63.35

Weight (kDa)

5.74

Isoelectric Point (pI)

48.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	281 - 422	2e-23	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	434
AccB7I	CCANNNNNTGG	2 cut(s)	38, 910
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	3 cut(s)	477, 920, 1283
AciI	CCGC	8 cut(s)	135, 259, 602, 920, 953, 956, 1067, 1626
AclWI	GGATC	3 cut(s)	701, 1503, 1534
AcoI	YGGCCR	2 cut(s)	390, 1172
AcsI	RAATTY	2 cut(s)	1126, 1394
AcyI	GRCGYC	1 cut(s)	435
AdeI	CACNNNGTG	1 cut(s)	1156
AfaI	GTAC	3 cut(s)	373, 1181, 1619
AflIII	ACRYGT	4 cut(s)	226, 363, 417, 660
AgsI	TTSAA	6 cut(s)	60, 284, 467, 811, 1518, 1576
AjiI	CACGTC	2 cut(s)	388, 1598
AjnI	CCWGG	6 cut(s)	37, 51, 574, 885, 909, 1449
AjuI	GAANNNNNNNTTGG	2 cut(s)	390, 422
AluBI	AGCT	8 cut(s)	19, 267, 414, 873, 1195, 1210, 1251, 1376
AluI	AGCT	8 cut(s)	19, 267, 414, 873, 1195, 1210, 1251, 1376
Alw21I	GWGCWC	2 cut(s)	21, 918
Alw26I	GTCTC	2 cut(s)	87, 93
AlwI	GGATC	3 cut(s)	701, 1503, 1534
AlwNI	CAGNNNCTG	1 cut(s)	521
Ama87I	CYCGRG	3 cut(s)	90, 446, 535
AoxI	GGCC	7 cut(s)	46, 390, 786, 922, 1062, 1172, 1555
ApaI	GGGCCC	1 cut(s)	1066
ApeKI	GCWGC	3 cut(s)	472, 486, 599
ApoI	RAATTY	2 cut(s)	1126, 1394
AspLEI	GCGC	4 cut(s)	437, 472, 477, 1283
AspS9I	GGNCC	6 cut(s)	737, 883, 922, 939, 1062, 1063
AsuC2I	CCSGG	1 cut(s)	349
AsuHPI	GGTGA	4 cut(s)	901, 1079, 1225, 1324
AvaI	CYCGRG	3 cut(s)	90, 446, 535
AvaII	GGWCC	3 cut(s)	737, 883, 939
BaeGI	GKGCMC	2 cut(s)	1066, 1161
BalI	TGGCCA	1 cut(s)	1174
BanI	GGYRCC	1 cut(s)	434
BanII	GRGCYC	2 cut(s)	21, 1066
BauI	CACGAG	1 cut(s)	20
Bbv12I	GWGCWC	2 cut(s)	21, 918
BbvI	GCAGC	3 cut(s)	484, 498, 611
BccI	CCATC	6 cut(s)	40, 933, 1099, 1375, 1379, 1595
BceAI	ACGGC	3 cut(s)	933, 1061, 1570
BcgI	CGANNNNNNTGC	2 cut(s)	155, 189
BciT130I	CCWGG	6 cut(s)	39, 53, 576, 887, 911, 1451
BciVI	GTATCC	1 cut(s)	1120
BclI	TGATCA	2 cut(s)	108, 823
BcnI	CCSGG	1 cut(s)	349
BcoDI	GTCTC	2 cut(s)	87, 93
BfaI	CTAG	4 cut(s)	411, 452, 674, 818
BfmI	CTRYAG	3 cut(s)	12, 840, 1252
BfoI	RGCGCY	1 cut(s)	438
BfuI	GTATCC	1 cut(s)	1120
BglI	GCCNNNNNGGC	1 cut(s)	1082
BisI	GCNGC	5 cut(s)	473, 487, 600, 956, 1627
BlsI	GCNGC	5 cut(s)	474, 488, 601, 957, 1628
BmcAI	AGTACT	1 cut(s)	1619
Bme1390I	CCNGG	7 cut(s)	39, 53, 349, 576, 887, 911, 1451
Bme18I	GGWCC	3 cut(s)	737, 883, 939
BmeT110I	CYCGRG	3 cut(s)	90, 446, 535
BmgBI	CACGTC	2 cut(s)	388, 1598
BmgT120I	GGNCC	6 cut(s)	737, 883, 922, 939, 1062, 1063
BmiI	GGNNCC	7 cut(s)	408, 436, 739, 1022, 1064, 1065, 1455
BmrFI	CCNGG	7 cut(s)	39, 53, 349, 576, 887, 911, 1451
BmsI	GCATC	1 cut(s)	145
BpmI	CTGGAG	1 cut(s)	932
BpuEI	CTTGAG	2 cut(s)	86, 1157
BpuMI	CCSGG	1 cut(s)	349
BsaAI	YACGTR	1 cut(s)	418
BsaBI	GATNNNNATC	1 cut(s)	1108
BsaHI	GRCGYC	1 cut(s)	435
BsaJI	CCNNGG	5 cut(s)	37, 642, 909, 1405, 1420
BsaWI	WCCGGW	1 cut(s)	730
BsaXI	ACNNNNNCTCC	4 cut(s)	1092, 1122, 1529, 1559
Bse118I	RCCGGY	2 cut(s)	437, 1652
Bse1I	ACTGG	5 cut(s)	557, 1268, 1512, 1543, 1581
Bse8I	GATNNNNATC	1 cut(s)	1108
BseBI	CCWGG	6 cut(s)	39, 53, 576, 887, 911, 1451
BseDI	CCNNGG	5 cut(s)	37, 642, 909, 1405, 1420
BseGI	GGATG	4 cut(s)	32, 531, 1390, 1446
BseJI	GATNNNNATC	1 cut(s)	1108
BseMII	CTCAG	3 cut(s)	513, 528, 1449
BseNI	ACTGG	5 cut(s)	557, 1268, 1512, 1543, 1581
BseRI	GAGGAG	2 cut(s)	1509, 1683
BseSI	GKGCMC	2 cut(s)	1066, 1161
BseXI	GCAGC	3 cut(s)	484, 498, 611
BseYI	CCCAGC	1 cut(s)	1059
BsgI	GTGCAG	1 cut(s)	481
Bsh1236I	CGCG	3 cut(s)	477, 920, 1283
Bsh1285I	CGRYCG	1 cut(s)	1030
BshFI	GGCC	7 cut(s)	48, 392, 788, 924, 1064, 1174, 1557
BshNI	GGYRCC	1 cut(s)	434
BsiEI	CGRYCG	1 cut(s)	1030
BsiHKAI	GWGCWC	2 cut(s)	21, 918
BsiHKCI	CYCGRG	3 cut(s)	90, 446, 535
BsiSI	CCGG	4 cut(s)	348, 438, 731, 1653
BslFI	GGGAC	1 cut(s)	14
BsmAI	GTCTC	2 cut(s)	87, 93
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	1 cut(s)	14
BsmI	GAATGC	1 cut(s)	1204
BsnI	GGCC	7 cut(s)	48, 392, 788, 924, 1064, 1174, 1557
BsoBI	CYCGRG	3 cut(s)	90, 446, 535
Bsp120I	GGGCCC	1 cut(s)	1062
Bsp1286I	GDGCHC	4 cut(s)	21, 918, 1066, 1161
Bsp19I	CCATGG	1 cut(s)	1420
BspACI	CCGC	8 cut(s)	135, 259, 602, 920, 953, 956, 1067, 1626
BspANI	GGCC	7 cut(s)	48, 392, 788, 924, 1064, 1174, 1557
BspCNI	CTCAG	3 cut(s)	514, 527, 1450
BspFNI	CGCG	3 cut(s)	477, 920, 1283
BspLI	GGNNCC	7 cut(s)	408, 436, 739, 1022, 1064, 1065, 1455
BspMAI	CTGCAG	1 cut(s)	16
BspPI	GGATC	3 cut(s)	701, 1503, 1534
BspQI	GCTCTTC	1 cut(s)	187
BspT107I	GGYRCC	1 cut(s)	434
BsrFI	RCCGGY	2 cut(s)	437, 1652
BsrI	ACTGG	5 cut(s)	557, 1268, 1512, 1543, 1581
BssAI	RCCGGY	2 cut(s)	437, 1652
BssECI	CCNNGG	5 cut(s)	37, 642, 909, 1405, 1420
BssNI	GRCGYC	1 cut(s)	435
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	3 cut(s)	642, 1405, 1420
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	6 cut(s)	39, 53, 576, 887, 911, 1451
Bst4CI	ACNGT	3 cut(s)	115, 1036, 1154
Bst6I	CTCTTC	3 cut(s)	187, 1486, 1684
BstACI	GRCGYC	1 cut(s)	435
BstAPI	GCANNNNNTGC	2 cut(s)	495, 1156
BstBAI	YACGTR	1 cut(s)	418
BstDEI	CTNAG	3 cut(s)	514, 522, 1458
BstDSI	CCRYGG	1 cut(s)	1420
BstENI	CCTNNNNNAGG	1 cut(s)	42
BstF5I	GGATG	4 cut(s)	32, 531, 1390, 1446
BstFNI	CGCG	3 cut(s)	477, 920, 1283
BstH2I	RGCGCY	1 cut(s)	438
BstHHI	GCGC	4 cut(s)	437, 472, 477, 1283
BstMAI	GTCTC	2 cut(s)	87, 93
BstMCI	CGRYCG	1 cut(s)	1030
BstMWI	GCNNNNNNNGC	9 cut(s)	16, 258, 483, 495, 692, 861, 870, 1082, 1156
BstNI	CCWGG	6 cut(s)	39, 53, 576, 887, 911, 1451
BstNSI	RCATGY	3 cut(s)	230, 367, 686
BstSCI	CCNGG	7 cut(s)	37, 51, 347, 574, 885, 909, 1449
BstSFI	CTRYAG	3 cut(s)	12, 840, 1252
BstSLI	GKGCMC	2 cut(s)	1066, 1161
BstUI	CGCG	3 cut(s)	477, 920, 1283
BstV1I	GCAGC	3 cut(s)	484, 498, 611
BstX2I	RGATCY	2 cut(s)	1508, 1539
BstYI	RGATCY	2 cut(s)	1508, 1539
BsuI	GTATCC	1 cut(s)	1120
BsuRI	GGCC	7 cut(s)	48, 392, 788, 924, 1064, 1174, 1557
BtgI	CCRYGG	1 cut(s)	1420
BtrI	CACGTC	2 cut(s)	388, 1598
BtsCI	GGATG	4 cut(s)	32, 531, 1390, 1446
BtsI	GCAGTG	1 cut(s)	259
BtsIMutI	CAGTG	3 cut(s)	111, 150, 259
CaiI	CAGNNNCTG	1 cut(s)	521
CfoI	GCGC	4 cut(s)	437, 472, 477, 1283
Cfr10I	RCCGGY	2 cut(s)	437, 1652
Cfr13I	GGNCC	6 cut(s)	737, 883, 922, 939, 1062, 1063
CseI	GACGC	1 cut(s)	527
CsiI	ACCWGGT	2 cut(s)	51, 885
Csp6I	GTAC	3 cut(s)	372, 1180, 1618
CviQI	GTAC	3 cut(s)	372, 1180, 1618
DdeI	CTNAG	3 cut(s)	514, 522, 1458
DinI	GGCGCC	1 cut(s)	436
DraI	TTTAAA	1 cut(s)	508
DraIII	CACNNNGTG	1 cut(s)	1156
EaeI	YGGCCR	2 cut(s)	390, 1172
Eam1104I	CTCTTC	3 cut(s)	187, 1486, 1684
EarI	CTCTTC	3 cut(s)	187, 1486, 1684
EciI	GGCGGA	1 cut(s)	942
Ecl136II	GAGCTC	1 cut(s)	19
Eco130I	CCWWGG	3 cut(s)	642, 1405, 1420
Eco24I	GRGCYC	2 cut(s)	21, 1066
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	3 cut(s)	737, 883, 939
Eco53kI	GAGCTC	1 cut(s)	19
Eco88I	CYCGRG	3 cut(s)	90, 446, 535
EcoICRI	GAGCTC	1 cut(s)	19
EcoNI	CCTNNNNNAGG	1 cut(s)	42
EcoO109I	RGGNCCY	2 cut(s)	737, 1063
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	6 cut(s)	37, 51, 574, 885, 909, 1449
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	3 cut(s)	642, 1405, 1420
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	2 cut(s)	21, 1066
EgeI	GGCGCC	1 cut(s)	436
EheI	GGCGCC	1 cut(s)	436
ErhI	CCWWGG	3 cut(s)	642, 1405, 1420
Esp3I	CGTCTC	1 cut(s)	87
FaqI	GGGAC	1 cut(s)	14
FauI	CCCGC	3 cut(s)	142, 913, 1074
FbaI	TGATCA	2 cut(s)	108, 823
FblI	GTMKAC	1 cut(s)	360
Fnu4HI	GCNGC	5 cut(s)	473, 487, 600, 956, 1627
FokI	GGATG	4 cut(s)	19, 518, 1397, 1433
FriOI	GRGCYC	2 cut(s)	21, 1066
Fsp4HI	GCNGC	5 cut(s)	473, 487, 600, 956, 1627
FspBI	CTAG	4 cut(s)	411, 452, 674, 818
GlaI	GCGC	4 cut(s)	436, 471, 476, 1282
GluI	GCNGC	5 cut(s)	473, 487, 600, 956, 1627
GsaI	CCCAGC	1 cut(s)	1063
GsuI	CTGGAG	1 cut(s)	932
HaeII	RGCGCY	1 cut(s)	438
HaeIII	GGCC	7 cut(s)	48, 392, 788, 924, 1064, 1174, 1557
HapII	CCGG	4 cut(s)	348, 438, 731, 1653
HgaI	GACGC	1 cut(s)	527
HhaI	GCGC	4 cut(s)	437, 472, 477, 1283
Hin1I	GRCGYC	1 cut(s)	435
Hin6I	GCGC	4 cut(s)	435, 470, 475, 1281
HinP1I	GCGC	4 cut(s)	435, 470, 475, 1281
HincII	GTYRAC	1 cut(s)	361
HindII	GTYRAC	1 cut(s)	361
HindIII	AAGCTT	2 cut(s)	871, 1374
HpaII	CCGG	4 cut(s)	348, 438, 731, 1653
HphI	GGTGA	4 cut(s)	901, 1079, 1225, 1324
Hpy166II	GTNNAC	3 cut(s)	361, 658, 666
Hpy188I	TCNGA	5 cut(s)	517, 706, 781, 1438, 1506
Hpy188III	TCNNGA	7 cut(s)	90, 92, 106, 535, 710, 808, 1548
Hpy8I	GTNNAC	3 cut(s)	361, 658, 666
Hpy99I	CGWCG	6 cut(s)	362, 389, 995, 1166, 1537, 1599
HpyAV	CCTTC	7 cut(s)	242, 586, 698, 1010, 1210, 1279, 1357
HpyCH4III	ACNGT	3 cut(s)	115, 1036, 1154
HpyCH4IV	ACGT	4 cut(s)	387, 417, 662, 1597
HpyCH4V	TGCA	7 cut(s)	14, 74, 127, 176, 486, 498, 1202
HpyF10VI	GCNNNNNNNGC	9 cut(s)	16, 258, 483, 495, 692, 861, 870, 1082, 1156
HpyF3I	CTNAG	3 cut(s)	514, 522, 1458
HpySE526I	ACGT	4 cut(s)	387, 417, 662, 1597
Hsp92I	GRCGYC	1 cut(s)	435
HspAI	GCGC	4 cut(s)	435, 470, 475, 1281
KasI	GGCGCC	1 cut(s)	434
KroI	GCCGGC	2 cut(s)	437, 1652
KroNI	GCCGGC	2 cut(s)	439, 1654
Ksp22I	TGATCA	2 cut(s)	108, 823
LguI	GCTCTTC	1 cut(s)	187
LmnI	GCTCC	2 cut(s)	913, 1453
Lsp1109I	GCAGC	3 cut(s)	484, 498, 611
LweI	GCATC	1 cut(s)	145
MabI	ACCWGGT	2 cut(s)	51, 885
MaeI	CTAG	4 cut(s)	411, 452, 674, 818
MaeII	ACGT	4 cut(s)	387, 417, 662, 1597
MaeIII	GTNAC	1 cut(s)	983
MboII	GAAGA	5 cut(s)	174, 177, 415, 1503, 1701
MflI	RGATCY	2 cut(s)	1508, 1539
MhlI	GDGCHC	4 cut(s)	21, 918, 1066, 1161
MlsI	TGGCCA	1 cut(s)	1174
MluCI	AATT	9 cut(s)	398, 969, 1126, 1220, 1226, 1239, 1394, 1481, 1576
MluNI	TGGCCA	1 cut(s)	1174
Mly113I	GGCGCC	1 cut(s)	435
MlyI	GAGTC	9 cut(s)	176, 331, 338, 506, 1014, 1150, 1273, 1442, 1510
MmeI	TCCRAC	1 cut(s)	1416
Mox20I	TGGCCA	1 cut(s)	1174
Mph1103I	ATGCAT	1 cut(s)	1204
MroNI	GCCGGC	2 cut(s)	437, 1652
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	4 cut(s)	303, 507, 747, 1711
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	3 cut(s)	602, 1195, 1210
MspI	CCGG	4 cut(s)	348, 438, 731, 1653
MspR9I	CCNGG	7 cut(s)	39, 53, 349, 576, 887, 911, 1451
MteI	GCGCNGCGC	1 cut(s)	473
Mva1269I	GAATGC	1 cut(s)	1204
MvaI	CCWGG	6 cut(s)	39, 53, 576, 887, 911, 1451
MvnI	CGCG	3 cut(s)	477, 920, 1283
MwoI	GCNNNNNNNGC	9 cut(s)	16, 258, 483, 495, 692, 861, 870, 1082, 1156
NaeI	GCCGGC	2 cut(s)	439, 1654
NarI	GGCGCC	1 cut(s)	435
NciI	CCSGG	1 cut(s)	349
NcoI	CCATGG	1 cut(s)	1420
NgoMIV	GCCGGC	2 cut(s)	437, 1652
NlaIV	GGNNCC	7 cut(s)	408, 436, 739, 1022, 1064, 1065, 1455
NmeAIII	GCCGAG	1 cut(s)	319
NmuCI	GTSAC	1 cut(s)	983
NsiI	ATGCAT	1 cut(s)	1204
NspI	RCATGY	3 cut(s)	230, 367, 686
PaeI	GCATGC	1 cut(s)	686
PaeR7I	CTCGAG	1 cut(s)	90
PciI	ACATGT	2 cut(s)	226, 363
PciSI	GCTCTTC	1 cut(s)	187
PcsI	WCGNNNNNNNCGW	2 cut(s)	390, 1158
PctI	GAATGC	1 cut(s)	1204
PdiI	GCCGGC	2 cut(s)	439, 1654
PfeI	GAWTC	5 cut(s)	605, 677, 715, 776, 1572
PflMI	CCANNNNNTGG	2 cut(s)	38, 910
PfoI	TCCNGGA	1 cut(s)	1449
PkrI	GCNGC	5 cut(s)	474, 488, 601, 957, 1628
Ple19I	CGATCG	1 cut(s)	1030
PleI	GAGTC	9 cut(s)	175, 331, 337, 506, 1013, 1149, 1272, 1441, 1509
PluTI	GGCGCC	1 cut(s)	438
PpsI	GAGTC	9 cut(s)	175, 331, 337, 506, 1013, 1149, 1272, 1441, 1509
Ppu21I	YACGTR	1 cut(s)	418
PpuMI	RGGWCCY	1 cut(s)	737
PscI	ACATGT	2 cut(s)	226, 363
Psp124BI	GAGCTC	1 cut(s)	21
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	6 cut(s)	37, 51, 574, 885, 909, 1449
PspFI	CCCAGC	1 cut(s)	1059
PspGI	CCWGG	6 cut(s)	37, 51, 574, 885, 909, 1449
PspN4I	GGNNCC	7 cut(s)	408, 436, 739, 1022, 1064, 1065, 1455
PspOMI	GGGCCC	1 cut(s)	1062
PspPI	GGNCC	6 cut(s)	737, 883, 922, 939, 1062, 1063
PspPPI	RGGWCCY	1 cut(s)	737
PstI	CTGCAG	1 cut(s)	16
PstNI	CAGNNNCTG	1 cut(s)	521
PsuI	RGATCY	2 cut(s)	1508, 1539
PvuI	CGATCG	1 cut(s)	1030
PvuII	CAGCTG	2 cut(s)	1195, 1210
RsaI	GTAC	3 cut(s)	373, 1181, 1619
RsaNI	GTAC	3 cut(s)	372, 1180, 1618
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	1 cut(s)	359
SapI	GCTCTTC	1 cut(s)	187
SaqAI	TTAA	4 cut(s)	303, 507, 747, 1711
SatI	GCNGC	5 cut(s)	473, 487, 600, 956, 1627
Sau96I	GGNCC	6 cut(s)	737, 883, 922, 939, 1062, 1063
ScaI	AGTACT	1 cut(s)	1619
SchI	GAGTC	9 cut(s)	176, 331, 338, 506, 1014, 1150, 1273, 1442, 1510
ScrFI	CCNGG	7 cut(s)	39, 53, 349, 576, 887, 911, 1451
SduI	GDGCHC	4 cut(s)	21, 918, 1066, 1161
SexAI	ACCWGGT	2 cut(s)	51, 885
SfaNI	GCATC	1 cut(s)	145
SfcI	CTRYAG	3 cut(s)	12, 840, 1252
SfoI	GGCGCC	1 cut(s)	436
Sfr274I	CTCGAG	1 cut(s)	90
SinI	GGWCC	3 cut(s)	737, 883, 939
SlaI	CTCGAG	1 cut(s)	90
SmlI	CTYRAG	3 cut(s)	65, 90, 1136
SmoI	CTYRAG	3 cut(s)	65, 90, 1136
SphI	GCATGC	1 cut(s)	686
Sse9I	AATT	9 cut(s)	398, 969, 1126, 1220, 1226, 1239, 1394, 1481, 1576
SsiI	CCGC	8 cut(s)	135, 259, 602, 920, 953, 956, 1067, 1626
SspDI	GGCGCC	1 cut(s)	434
SspMI	CTAG	4 cut(s)	411, 452, 674, 818
SstI	GAGCTC	1 cut(s)	21
StyD4I	CCNGG	7 cut(s)	37, 51, 347, 574, 885, 909, 1449
StyI	CCWWGG	3 cut(s)	642, 1405, 1420
TaaI	ACNGT	3 cut(s)	115, 1036, 1154
TaiI	ACGT	4 cut(s)	390, 420, 665, 1600
TaqI	TCGA	7 cut(s)	91, 165, 360, 384, 1026, 1030, 1391
TasI	AATT	9 cut(s)	398, 969, 1126, 1220, 1226, 1239, 1394, 1481, 1576
TatI	WGTACW	1 cut(s)	1617
TauI	GCSGC	2 cut(s)	958, 1629
TfiI	GAWTC	5 cut(s)	605, 677, 715, 776, 1572
Tru1I	TTAA	4 cut(s)	303, 507, 747, 1711
Tru9I	TTAA	4 cut(s)	303, 507, 747, 1711
TscAI	CASTG	3 cut(s)	118, 157, 259
TseFI	GTSAC	1 cut(s)	983
TseI	GCWGC	3 cut(s)	472, 486, 599
Tsp45I	GTSAC	1 cut(s)	983
TspDTI	ATGAA	5 cut(s)	202, 680, 690, 777, 1331
TspGWI	ACGGA	3 cut(s)	251, 260, 1550
TspRI	CASTG	3 cut(s)	118, 157, 259
Van91I	CCANNNNNTGG	2 cut(s)	38, 910
VpaK11BI	GGWCC	3 cut(s)	737, 883, 939
XagI	CCTNNNNNAGG	1 cut(s)	42
XapI	RAATTY	2 cut(s)	1126, 1394
XceI	RCATGY	3 cut(s)	230, 367, 686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	649
XhoI	CTCGAG	1 cut(s)	90
XmiI	GTMKAC	1 cut(s)	360
XspI	CTAG	4 cut(s)	411, 452, 674, 818
ZrmI	AGTACT	1 cut(s)	1619
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.