Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Reverse (-)

11049137 .. 11050830

Gene Structure 1694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1141200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1245 bp

ATGAAGCAACCAATGAAACTCGTCTTCATCCCCTATGCCGGCACCGGCCACCTCATCTCCGCCGTGGAGATGGCAAAGCTCCTTGTCTCTCGAGACGAGAAACTCTTCATCACAGTCCTCATCATGAAGCTCCCCTTCGAATCCAAGGGTACAGAGGCCTACATATCCTCCCTCGAATCCTCTCCCGTGTTGTCACGTGTCAACTTCATCACCCTCCCACAGGCCGCCTCCGACATCGACACGCGCAAAAGTCCCAACGCCTTCCGCAGCAAATTCGTCGAGAGCCACAAACCCTACGTCAAAGATGCTGTCTCCAAACTCGCCGAGTCAGAGTCCGAGTCGACTCGGGTTGCCGGGTTTGTCATCGACATGGTTTGCACGACAATGGTCGACGTGGCCAATGATTTCGGAGTTCCTACGTACATGTTCTTCACTTCGCCGGCCGGGTTTCTCGGGCTGGTACTTAATATCCAAACGATTCGCGACGTGTATGGCAAGCACGTAAGCGAGTTCAAGGGCTCGGATGCTGAGTTGACACTGCCAACTTTTGTCGACTCGGTTCCGGCTGGAGTTTTGCCAAGCGTCCTTTTGGACAAGGATGGTGCGAAAGCTTTCCTTGGCTATGCCAACAGGTTTAGAGAACTCAAGGGTATTCTGATAAATACGTTCGTTGAGTTGGAATCACACGCCCTTGATTCACTTTCTGATGGTAAGACCCCACCTGTGTACCCTGTGGGACCTATTCTGAACCTAAAGATCAGTGAAACCGAGGTGGGTTCGAAGCAGGCTCAGCAGAAGTCGGATATATTGGAGTGGCTAGATGAGCAGCCCGATTCATCTGTGGTGTTCCTGTGCTTTGGGAGCATGGGAAGCTTTGGTGAGGACCAGGTGAGGGAGATAGCATCGGGGCTGGAGCAGAGCGGGCATCGCTTCTTGTGGTCGCTGCGCCAGCCCCCACCAAAGGGGATTATCGCTTCCCCTAGTGACTATTCGGATCCTAAGGCAGTCCTACCTGAAGGATTCCTCGATCGGACAGCTGGGATTGGGAAGGTCATAGGTTGGGCTCCGCAAGTGGCGATCCTAGCCCACCCGGCCGTCGGAGGGTTCGTGTCCCATTGCGGGTGGAATTCCACGTTGGAGAGCCTATGGTTTGGCGACATGAGTGAGAAGAGCAAGAAAGCCCTGATGGTTGGTGGCTCCTCTTACAATTCATTGGGACGTTTTCTTGATCAAATTTCCCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

415

Amino Acids

45.04

Weight (kDa)

5.5

Isoelectric Point (pI)

44.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	258 - 385	8.2e-16	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	41
AccBSI	CCGCTC	1 cut(s)	921
AccI	GTMKAC	3 cut(s)	341, 390, 552
AccII	CGCG	2 cut(s)	244, 483
AciI	CCGC	6 cut(s)	60, 225, 265, 921, 1067, 1119
AclWI	GGATC	3 cut(s)	989, 1002, 1072
AcoI	YGGCCR	4 cut(s)	46, 396, 441, 1092
AcsI	RAATTY	3 cut(s)	272, 1126, 1233
AcuI	CTGAAG	1 cut(s)	1035
AcvI	CACGTG	1 cut(s)	197
AfaI	GTAC	4 cut(s)	151, 422, 462, 728
AfiI	CCNNNNNNNGG	8 cut(s)	38, 220, 892, 961, 962, 1097, 1101, 1119
AflIII	ACRYGT	3 cut(s)	196, 423, 486
AgsI	TTSAA	1 cut(s)	514
AjiI	CACGTC	2 cut(s)	394, 487
AjnI	CCWGG	1 cut(s)	885
AjuI	GAANNNNNNNTTGG	2 cut(s)	1118, 1150
AluBI	AGCT	5 cut(s)	79, 130, 611, 873, 1037
AluI	AGCT	5 cut(s)	79, 130, 611, 873, 1037
Alw26I	GTCTC	3 cut(s)	87, 91, 316
AlwI	GGATC	3 cut(s)	989, 1002, 1072
Ama87I	CYCGRG	3 cut(s)	90, 345, 452
AoxI	GGCC	6 cut(s)	46, 156, 222, 396, 441, 1092
ApeKI	GCWGC	3 cut(s)	267, 826, 943
ApoI	RAATTY	3 cut(s)	272, 1126, 1233
ArsI	GACNNNNNNTTYG	4 cut(s)	282, 294, 314, 326
Asp700I	GAANNNNTTC	2 cut(s)	104, 611
AspLEI	GCGC	2 cut(s)	246, 948
AspS9I	GGNCC	2 cut(s)	737, 883
AsuC2I	CCSGG	3 cut(s)	355, 445, 1091
AsuHPI	GGTGA	3 cut(s)	202, 890, 901
AsuII	TTCGAA	2 cut(s)	138, 779
AvaI	CYCGRG	3 cut(s)	90, 345, 452
AvaII	GGWCC	2 cut(s)	737, 883
AxyI	CCTNAGG	1 cut(s)	999
BaeI	ACNNNNGTAYC	2 cut(s)	710, 743
BalI	TGGCCA	1 cut(s)	398
BamHI	GGATCC	1 cut(s)	994
BanI	GGYRCC	1 cut(s)	41
BanII	GRGCYC	2 cut(s)	521, 1066
BarI	GAAGNNNNNNTAC	2 cut(s)	413, 445
BbrPI	CACGTG	1 cut(s)	197
BbsI	GAAGAC	1 cut(s)	16
BbvI	GCAGC	3 cut(s)	279, 838, 930
BccI	CCATC	4 cut(s)	64, 593, 701, 1180
BceAI	ACGGC	2 cut(s)	47, 1079
BcgI	CGANNNNNNTGC	4 cut(s)	256, 259, 290, 293
BciT130I	CCWGG	1 cut(s)	887
BclI	TGATCA	1 cut(s)	1228
BcnI	CCSGG	3 cut(s)	355, 445, 1091
BcoDI	GTCTC	3 cut(s)	87, 91, 316
BfaI	CTAG	3 cut(s)	818, 981, 1082
BglI	GCCNNNNNGGC	1 cut(s)	1091
BisI	GCNGC	4 cut(s)	225, 268, 827, 944
BlpI	GCTNAGC	1 cut(s)	789
BlsI	GCNGC	4 cut(s)	226, 269, 828, 945
Bme1390I	CCNGG	4 cut(s)	355, 445, 887, 1091
Bme18I	GGWCC	2 cut(s)	737, 883
BmeT110I	CYCGRG	3 cut(s)	90, 345, 452
BmgBI	CACGTC	2 cut(s)	394, 487
BmgT120I	GGNCC	2 cut(s)	737, 883
BmiI	GGNNCC	6 cut(s)	43, 561, 738, 996, 1065, 1198
BmrFI	CCNGG	4 cut(s)	355, 445, 887, 1091
BmsI	GCATC	4 cut(s)	295, 514, 911, 934
BoxI	GACNNNNGTC	1 cut(s)	386
BpiI	GAAGAC	1 cut(s)	16
BpmI	CTGGAG	2 cut(s)	588, 932
Bpu1102I	GCTNAGC	1 cut(s)	789
Bpu14I	TTCGAA	2 cut(s)	138, 779
BpuEI	CTTGAG	1 cut(s)	629
BpuMI	CCSGG	3 cut(s)	355, 445, 1091
BsaAI	YACGTR	3 cut(s)	197, 420, 502
BsaJI	CCNNGG	4 cut(s)	63, 144, 616, 768
BsaXI	ACNNNNNCTCC	6 cut(s)	41, 71, 152, 182, 1092, 1122
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 220, 892, 961, 962, 1097, 1101, 1119
Bse118I	RCCGGY	3 cut(s)	38, 44, 439
Bse21I	CCTNAGG	1 cut(s)	999
Bse3DI	GCAATG	1 cut(s)	1114
BseBI	CCWGG	1 cut(s)	887
BseDI	CCNNGG	4 cut(s)	63, 144, 616, 768
BseGI	GGATG	3 cut(s)	27, 529, 604
BseLI	CCNNNNNNNGG	8 cut(s)	38, 220, 892, 961, 962, 1097, 1101, 1119
BseMI	GCAATG	1 cut(s)	1114
BseMII	CTCAG	2 cut(s)	519, 803
BseRI	GAGGAG	1 cut(s)	1189
BseX3I	CGGCCG	2 cut(s)	441, 1092
BseXI	GCAGC	3 cut(s)	279, 838, 930
BseYI	CCCAGC	1 cut(s)	1037
Bsh1236I	CGCG	2 cut(s)	244, 483
Bsh1285I	CGRYCG	3 cut(s)	444, 1030, 1095
BshFI	GGCC	6 cut(s)	48, 158, 224, 398, 443, 1094
BshNI	GGYRCC	1 cut(s)	41
BsiEI	CGRYCG	3 cut(s)	444, 1030, 1095
BsiHKCI	CYCGRG	3 cut(s)	90, 345, 452
BsiSI	CCGG	7 cut(s)	39, 45, 354, 440, 444, 563, 1091
BslFI	GGGAC	4 cut(s)	237, 750, 1096, 1230
BslI	CCNNNNNNNGG	8 cut(s)	38, 220, 892, 961, 962, 1097, 1101, 1119
BsmAI	GTCTC	3 cut(s)	87, 91, 316
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	4 cut(s)	237, 750, 1096, 1230
BsnI	GGCC	6 cut(s)	48, 158, 224, 398, 443, 1094
BsoBI	CYCGRG	3 cut(s)	90, 345, 452
Bsp119I	TTCGAA	2 cut(s)	138, 779
Bsp1286I	GDGCHC	2 cut(s)	521, 1066
Bsp143I	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
Bsp1720I	GCTNAGC	1 cut(s)	789
Bsp68I	TCGCGA	1 cut(s)	483
BspACI	CCGC	6 cut(s)	60, 225, 265, 921, 1067, 1119
BspANI	GGCC	6 cut(s)	48, 158, 224, 398, 443, 1094
BspCNI	CTCAG	2 cut(s)	520, 802
BspFNI	CGCG	2 cut(s)	244, 483
BspHI	TCATGA	1 cut(s)	123
BspLI	GGNNCC	6 cut(s)	43, 561, 738, 996, 1065, 1198
BspPI	GGATC	3 cut(s)	989, 1002, 1072
BspQI	GCTCTTC	1 cut(s)	1163
BspT104I	TTCGAA	2 cut(s)	138, 779
BspT107I	GGYRCC	1 cut(s)	41
BsrBI	CCGCTC	1 cut(s)	921
BsrDI	GCAATG	1 cut(s)	1114
BsrFI	RCCGGY	3 cut(s)	38, 44, 439
BssAI	RCCGGY	3 cut(s)	38, 44, 439
BssECI	CCNNGG	4 cut(s)	63, 144, 616, 768
BssMI	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
BssT1I	CCWWGG	2 cut(s)	144, 616
Bst2UI	CCWGG	1 cut(s)	887
Bst4CI	ACNGT	1 cut(s)	115
Bst6I	CTCTTC	2 cut(s)	110, 1163
BstBAI	YACGTR	3 cut(s)	197, 420, 502
BstBI	TTCGAA	2 cut(s)	138, 779
BstC8I	GCNNGC	6 cut(s)	40, 441, 497, 786, 923, 950
BstDEI	CTNAG	3 cut(s)	528, 789, 999
BstDSI	CCRYGG	1 cut(s)	63
BstENI	CCTNNNNNAGG	1 cut(s)	218
BstF5I	GGATG	3 cut(s)	27, 529, 604
BstFNI	CGCG	2 cut(s)	244, 483
BstHHI	GCGC	2 cut(s)	246, 948
BstKTI	GATC	5 cut(s)	759, 997, 1030, 1080, 1231
BstMAI	GTCTC	3 cut(s)	87, 91, 316
BstMBI	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
BstMCI	CGRYCG	3 cut(s)	444, 1030, 1095
BstMWI	GCNNNNNNNGC	9 cut(s)	790, 823, 861, 870, 922, 927, 949, 1082, 1091
BstNI	CCWGG	1 cut(s)	887
BstNSI	RCATGY	1 cut(s)	427
BstPAI	GACNNNNGTC	1 cut(s)	386
BstSCI	CCNGG	4 cut(s)	353, 443, 885, 1089
BstSNI	TACGTA	1 cut(s)	420
BstUI	CGCG	2 cut(s)	244, 483
BstV1I	GCAGC	3 cut(s)	279, 838, 930
BstV2I	GAAGAC	1 cut(s)	16
BstX2I	RGATCY	1 cut(s)	994
BstYI	RGATCY	1 cut(s)	994
BstZI	CGGCCG	2 cut(s)	441, 1092
Bsu36I	CCTNAGG	1 cut(s)	999
BsuRI	GGCC	6 cut(s)	48, 158, 224, 398, 443, 1094
BtgI	CCRYGG	1 cut(s)	63
BtgZI	GCGATG	1 cut(s)	911
BtrI	CACGTC	2 cut(s)	394, 487
BtsCI	GGATG	3 cut(s)	27, 529, 604
BtsI	GCAGTG	1 cut(s)	536
BtsIMutI	CAGTG	2 cut(s)	536, 766
BtuMI	TCGCGA	1 cut(s)	483
Cac8I	GCNNGC	6 cut(s)	40, 441, 497, 786, 923, 950
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	2 cut(s)	246, 948
Cfr10I	RCCGGY	3 cut(s)	38, 44, 439
Cfr13I	GGNCC	2 cut(s)	737, 883
CseI	GACGC	1 cut(s)	571
CsiI	ACCWGGT	1 cut(s)	885
Csp6I	GTAC	4 cut(s)	150, 421, 461, 727
CviAII	CATG	5 cut(s)	124, 370, 424, 865, 1159
CviQI	GTAC	4 cut(s)	150, 421, 461, 727
DdeI	CTNAG	3 cut(s)	528, 789, 999
DpnI	GATC	5 cut(s)	758, 996, 1029, 1079, 1230
DpnII	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
EaeI	YGGCCR	4 cut(s)	46, 396, 441, 1092
EagI	CGGCCG	2 cut(s)	441, 1092
Eam1104I	CTCTTC	2 cut(s)	110, 1163
EarI	CTCTTC	2 cut(s)	110, 1163
EciI	GGCGGA	1 cut(s)	49
EclXI	CGGCCG	2 cut(s)	441, 1092
Eco105I	TACGTA	1 cut(s)	420
Eco130I	CCWWGG	2 cut(s)	144, 616
Eco147I	AGGCCT	1 cut(s)	158
Eco24I	GRGCYC	2 cut(s)	521, 1066
Eco47I	GGWCC	2 cut(s)	737, 883
Eco52I	CGGCCG	2 cut(s)	441, 1092
Eco57I	CTGAAG	1 cut(s)	1035
Eco72I	CACGTG	1 cut(s)	197
Eco81I	CCTNAGG	1 cut(s)	999
Eco88I	CYCGRG	3 cut(s)	90, 345, 452
EcoNI	CCTNNNNNAGG	1 cut(s)	218
EcoO109I	RGGNCCY	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	1 cut(s)	885
EcoT14I	CCWWGG	2 cut(s)	144, 616
EcoT38I	GRGCYC	2 cut(s)	521, 1066
ErhI	CCWWGG	2 cut(s)	144, 616
Esp3I	CGTCTC	1 cut(s)	87
FaeI	CATG	5 cut(s)	127, 373, 427, 868, 1162
FalI	AAGNNNNNCTT	4 cut(s)	119, 151, 600, 632
FaqI	GGGAC	4 cut(s)	237, 750, 1096, 1230
FatI	CATG	5 cut(s)	123, 369, 423, 864, 1158
FauI	CCCGC	2 cut(s)	914, 1112
FbaI	TGATCA	1 cut(s)	1228
FblI	GTMKAC	3 cut(s)	341, 390, 552
Fnu4HI	GCNGC	4 cut(s)	225, 268, 827, 944
FokI	GGATG	3 cut(s)	14, 536, 611
FriOI	GRGCYC	2 cut(s)	521, 1066
Fsp4HI	GCNGC	4 cut(s)	225, 268, 827, 944
FspBI	CTAG	3 cut(s)	818, 981, 1082
GlaI	GCGC	2 cut(s)	245, 947
GluI	GCNGC	4 cut(s)	225, 268, 827, 944
GsaI	CCCAGC	1 cut(s)	1041
GsuI	CTGGAG	2 cut(s)	588, 932
HaeIII	GGCC	6 cut(s)	48, 158, 224, 398, 443, 1094
HapII	CCGG	7 cut(s)	39, 45, 354, 440, 444, 563, 1091
HgaI	GACGC	1 cut(s)	571
HhaI	GCGC	2 cut(s)	246, 948
Hin1II	CATG	5 cut(s)	127, 373, 427, 868, 1162
Hin6I	GCGC	2 cut(s)	244, 946
HinP1I	GCGC	2 cut(s)	244, 946
HincII	GTYRAC	5 cut(s)	202, 342, 391, 534, 553
HindII	GTYRAC	5 cut(s)	202, 342, 391, 534, 553
HindIII	AAGCTT	2 cut(s)	609, 871
HpaII	CCGG	7 cut(s)	39, 45, 354, 440, 444, 563, 1091
HphI	GGTGA	3 cut(s)	202, 890, 901
Hpy166II	GTNNAC	6 cut(s)	202, 342, 391, 534, 553, 727
Hpy188III	TCNNGA	6 cut(s)	90, 92, 124, 280, 482, 1226
Hpy8I	GTNNAC	6 cut(s)	202, 342, 391, 534, 553, 727
Hpy99I	CGWCG	4 cut(s)	281, 395, 488, 1100
HpyAV	CCTTC	4 cut(s)	145, 271, 1010, 1042
HpyCH4III	ACNGT	1 cut(s)	115
HpyCH4IV	ACGT	9 cut(s)	196, 297, 393, 419, 486, 501, 665, 1133, 1219
HpyCH4V	TGCA	1 cut(s)	378
HpyF10VI	GCNNNNNNNGC	9 cut(s)	790, 823, 861, 870, 922, 927, 949, 1082, 1091
HpyF3I	CTNAG	3 cut(s)	528, 789, 999
HpySE526I	ACGT	9 cut(s)	196, 297, 393, 419, 486, 501, 665, 1133, 1219
Hsp92II	CATG	5 cut(s)	127, 373, 427, 868, 1162
HspAI	GCGC	2 cut(s)	244, 946
KroI	GCCGGC	2 cut(s)	38, 439
KroNI	GCCGGC	2 cut(s)	40, 441
Ksp22I	TGATCA	1 cut(s)	1228
Kzo9I	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
LguI	GCTCTTC	1 cut(s)	1163
LmnI	GCTCC	6 cut(s)	84, 135, 861, 913, 1069, 1202
Lsp1109I	GCAGC	3 cut(s)	279, 838, 930
LweI	GCATC	4 cut(s)	295, 514, 911, 934
MabI	ACCWGGT	1 cut(s)	885
MaeI	CTAG	3 cut(s)	818, 981, 1082
MaeII	ACGT	9 cut(s)	196, 297, 393, 419, 486, 501, 665, 1133, 1219
MaeIII	GTNAC	2 cut(s)	192, 983
MalI	GATC	5 cut(s)	758, 996, 1029, 1079, 1230
MbiI	CCGCTC	1 cut(s)	921
MboI	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
MboII	GAAGA	4 cut(s)	16, 97, 421, 1180
MflI	RGATCY	1 cut(s)	994
MhlI	GDGCHC	2 cut(s)	521, 1066
MlsI	TGGCCA	1 cut(s)	398
MluCI	AATT	4 cut(s)	272, 1126, 1207, 1233
MluNI	TGGCCA	1 cut(s)	398
MlyI	GAGTC	5 cut(s)	335, 337, 341, 347, 548
MmeI	TCCRAC	5 cut(s)	255, 657, 780, 1078, 1116
Mox20I	TGGCCA	1 cut(s)	398
MroNI	GCCGGC	2 cut(s)	38, 439
MroXI	GAANNNNTTC	2 cut(s)	104, 611
MscI	TGGCCA	1 cut(s)	398
MseI	TTAA	1 cut(s)	465
MslI	CAYNNNNRTG	2 cut(s)	368, 383
Msp20I	TGGCCA	1 cut(s)	398
MspA1I	CMGCKG	1 cut(s)	1037
MspI	CCGG	7 cut(s)	39, 45, 354, 440, 444, 563, 1091
MspR9I	CCNGG	4 cut(s)	355, 445, 887, 1091
MvaI	CCWGG	1 cut(s)	887
MvnI	CGCG	2 cut(s)	244, 483
MwoI	GCNNNNNNNGC	9 cut(s)	790, 823, 861, 870, 922, 927, 949, 1082, 1091
NaeI	GCCGGC	2 cut(s)	40, 441
NciI	CCSGG	3 cut(s)	355, 445, 1091
NdeII	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
NgoMIV	GCCGGC	2 cut(s)	38, 439
NlaIII	CATG	5 cut(s)	127, 373, 427, 868, 1162
NlaIV	GGNNCC	6 cut(s)	43, 561, 738, 996, 1065, 1198
NmeAIII	GCCGAG	1 cut(s)	349
NmuCI	GTSAC	2 cut(s)	192, 983
NruI	TCGCGA	1 cut(s)	483
NspI	RCATGY	1 cut(s)	427
NspV	TTCGAA	2 cut(s)	138, 779
PaeR7I	CTCGAG	1 cut(s)	90
PagI	TCATGA	1 cut(s)	123
PceI	AGGCCT	1 cut(s)	158
PciI	ACATGT	1 cut(s)	423
PciSI	GCTCTTC	1 cut(s)	1163
PcsI	WCGNNNNNNNCGW	1 cut(s)	1104
PdiI	GCCGGC	2 cut(s)	40, 441
PdmI	GAANNNNTTC	2 cut(s)	104, 611
PfeI	GAWTC	7 cut(s)	140, 176, 478, 680, 695, 833, 1020
PkrI	GCNGC	4 cut(s)	226, 269, 828, 945
Ple19I	CGATCG	1 cut(s)	1030
PleI	GAGTC	5 cut(s)	334, 337, 340, 346, 548
PmaCI	CACGTG	1 cut(s)	197
PmlI	CACGTG	1 cut(s)	197
PpsI	GAGTC	5 cut(s)	334, 337, 340, 346, 548
Ppu21I	YACGTR	3 cut(s)	197, 420, 502
PpuMI	RGGWCCY	1 cut(s)	737
PscI	ACATGT	1 cut(s)	423
PshAI	GACNNNNGTC	1 cut(s)	386
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	1 cut(s)	885
PspCI	CACGTG	1 cut(s)	197
PspFI	CCCAGC	1 cut(s)	1037
PspGI	CCWGG	1 cut(s)	885
PspN4I	GGNNCC	6 cut(s)	43, 561, 738, 996, 1065, 1198
PspPI	GGNCC	2 cut(s)	737, 883
PspPPI	RGGWCCY	1 cut(s)	737
PsuI	RGATCY	1 cut(s)	994
PvuI	CGATCG	1 cut(s)	1030
PvuII	CAGCTG	1 cut(s)	1037
RruI	TCGCGA	1 cut(s)	483
RsaI	GTAC	4 cut(s)	151, 422, 462, 728
RsaNI	GTAC	4 cut(s)	150, 421, 461, 727
RseI	CAYNNNNRTG	2 cut(s)	368, 383
SalI	GTCGAC	3 cut(s)	340, 389, 551
SapI	GCTCTTC	1 cut(s)	1163
SaqAI	TTAA	1 cut(s)	465
SatI	GCNGC	4 cut(s)	225, 268, 827, 944
Sau3AI	GATC	5 cut(s)	756, 994, 1027, 1077, 1228
Sau96I	GGNCC	2 cut(s)	737, 883
SchI	GAGTC	5 cut(s)	335, 337, 341, 347, 548
ScrFI	CCNGG	4 cut(s)	355, 445, 887, 1091
SduI	GDGCHC	2 cut(s)	521, 1066
SexAI	ACCWGGT	1 cut(s)	885
SfaNI	GCATC	4 cut(s)	295, 514, 911, 934
Sfr274I	CTCGAG	1 cut(s)	90
SfuI	TTCGAA	2 cut(s)	138, 779
SinI	GGWCC	2 cut(s)	737, 883
SlaI	CTCGAG	1 cut(s)	90
SmiMI	CAYNNNNRTG	2 cut(s)	368, 383
SmlI	CTYRAG	2 cut(s)	90, 644
SmoI	CTYRAG	2 cut(s)	90, 644
SnaBI	TACGTA	1 cut(s)	420
Sse9I	AATT	4 cut(s)	272, 1126, 1207, 1233
SseBI	AGGCCT	1 cut(s)	158
SsiI	CCGC	6 cut(s)	60, 225, 265, 921, 1067, 1119
SspMI	CTAG	3 cut(s)	818, 981, 1082
StuI	AGGCCT	1 cut(s)	158
StyD4I	CCNGG	4 cut(s)	353, 443, 885, 1089
StyI	CCWWGG	2 cut(s)	144, 616
TaaI	ACNGT	1 cut(s)	115
TaiI	ACGT	9 cut(s)	199, 300, 396, 422, 489, 504, 668, 1136, 1222
TasI	AATT	4 cut(s)	272, 1126, 1207, 1233
TauI	GCSGC	1 cut(s)	227
TfiI	GAWTC	7 cut(s)	140, 176, 478, 680, 695, 833, 1020
Tru1I	TTAA	1 cut(s)	465
Tru9I	TTAA	1 cut(s)	465
TscAI	CASTG	2 cut(s)	543, 766
TseFI	GTSAC	2 cut(s)	192, 983
TseI	GCWGC	3 cut(s)	267, 826, 943
Tsp45I	GTSAC	2 cut(s)	192, 983
TspDTI	ATGAA	8 cut(s)	16, 17, 29, 97, 140, 196, 825, 1200
TspRI	CASTG	2 cut(s)	543, 766
VpaK11BI	GGWCC	2 cut(s)	737, 883
XagI	CCTNNNNNAGG	1 cut(s)	218
XapI	RAATTY	3 cut(s)	272, 1126, 1233
XceI	RCATGY	1 cut(s)	427
XhoI	CTCGAG	1 cut(s)	90
XmiI	GTMKAC	3 cut(s)	341, 390, 552
XmnI	GAANNNNTTC	2 cut(s)	104, 611
XspI	CTAG	3 cut(s)	818, 981, 1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.