Rmu_co8175810.1_g000001

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8175810.1
Physical Location & Seq
Forward (+)
1 .. 679
679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8175810.1_g000001.1.cds

Sequence Viewer

Length: 679 bp
taaaagggaaaagtgacgataataaccctaggggatcagatcaggccggccgagagatcttgaaatggcttgatgatcagcttccatcgtcggtcgtgttcttgtgctttggcagcatgggaagttttggtgaggatcaactgaaagagattgcctgcgcgctggagcacagtgggcatcggttcttgtggtccatacgttgccccccaccaaagggaaagattactcaccccagcgactatgccgatccagcggccatcttgcccgaggggtttctccaacggacggctgggatcggaaagatcatagggtgggccccacaagtggcggtgttggcccacccggccgtgggaggttttgtatctcattgcgggtggaattcgatactggagagtctttggttcggtgtgcctgtcgctacgtggccaatgtactcggagcaacaaatgaatgcatttgagatggtgaaggaattagaattggcggtgaagattagtgtagattacgggtgggacttttataactccggtcaggaggggcaaatggttttgagtgcccaagagatagaaagaggagttagggaggtgatggagcatgatagtgacataaggaagaaggtgaacgagatgagtgaaatgtgcaagaaatccttgatggatggtggctcttcctactcttc

Protein Analysis

226

Amino Acids

25.0

Weight (kDa)

5.15

Isoelectric Point (pI)

42.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000209)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 521
AccII CGCG 1 cut(s) 160
AciI CCGC 4 cut(s) 253, 328, 371, 484
AclWI GGATC 4 cut(s) 42, 143, 241, 301
AcoI YGGCCR 4 cut(s) 48, 254, 344, 424
AcsI RAATTY 1 cut(s) 378
AfaI GTAC 1 cut(s) 433
AfiI CCNNNNNNNGG 6 cut(s) 213, 214, 285, 324, 348, 349
AgsI TTSAA 1 cut(s) 63
AluBI AGCT 1 cut(s) 81
AluI AGCT 1 cut(s) 81
Alw21I GWGCWC 1 cut(s) 170
AlwI GGATC 4 cut(s) 42, 143, 241, 301
Ama87I CYCGRG 1 cut(s) 265
AoxI GGCC 7 cut(s) 44, 48, 254, 314, 335, 344, 424
ApaI GGGCCC 1 cut(s) 318
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 1 cut(s) 378
AspA2I CCTAGG 1 cut(s) 28
AspLEI GCGC 2 cut(s) 160, 162
AspS9I GGNCC 4 cut(s) 191, 314, 315, 336
AsuC2I CCSGG 1 cut(s) 343
AsuHPI GGTGA 6 cut(s) 142, 220, 477, 498, 597, 630
AvaI CYCGRG 1 cut(s) 265
AvaII GGWCC 1 cut(s) 191
AvrII CCTAGG 1 cut(s) 28
BaeGI GKGCMC 2 cut(s) 318, 558
BalI TGGCCA 1 cut(s) 426
BanII GRGCYC 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 170
BbvI GCAGC 1 cut(s) 125
BccI CCATC 6 cut(s) 93, 265, 456, 582, 648, 652
BceAI ACGGC 2 cut(s) 302, 331
BclI TGATCA 1 cut(s) 75
BcnI CCSGG 1 cut(s) 343
BfaI CTAG 1 cut(s) 29
BglI GCCNNNNNGGC 1 cut(s) 343
BglII AGATCT 1 cut(s) 56
BisI GCNGC 2 cut(s) 114, 254
BlnI CCTAGG 1 cut(s) 28
BlsI GCNGC 2 cut(s) 115, 255
Bme1390I CCNGG 1 cut(s) 343
Bme18I GGWCC 1 cut(s) 191
BmeT110I CYCGRG 1 cut(s) 265
BmgT120I GGNCC 4 cut(s) 191, 314, 315, 336
BmiI GGNNCC 2 cut(s) 316, 317
BmrFI CCNGG 1 cut(s) 343
BmsI GCATC 1 cut(s) 186
BpmI CTGGAG 2 cut(s) 184, 409
BpuMI CCSGG 1 cut(s) 343
BsaAI YACGTR 1 cut(s) 422
BsaJI CCNNGG 3 cut(s) 28, 266, 347
BsaWI WCCGGW 1 cut(s) 526
BsaXI ACNNNNNCTCC 2 cut(s) 344, 374
Bsc4I CCNNNNNNNGG 6 cut(s) 213, 214, 285, 324, 348, 349
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 1 cut(s) 392
Bse3DI GCAATG 1 cut(s) 366
BseDI CCNNGG 3 cut(s) 28, 266, 347
BseGI GGATG 1 cut(s) 663
BseLI CCNNNNNNNGG 6 cut(s) 213, 214, 285, 324, 348, 349
BseMI GCAATG 1 cut(s) 366
BseNI ACTGG 1 cut(s) 392
BsePI GCGCGC 1 cut(s) 158
BseRI GAGGAG 1 cut(s) 587
BseSI GKGCMC 2 cut(s) 318, 558
BseX3I CGGCCG 2 cut(s) 48, 344
BseXI GCAGC 1 cut(s) 125
BseYI CCCAGC 2 cut(s) 232, 289
Bsh1236I CGCG 1 cut(s) 160
Bsh1285I CGRYCG 3 cut(s) 51, 95, 347
BshFI GGCC 7 cut(s) 46, 50, 256, 316, 337, 346, 426
BsiEI CGRYCG 3 cut(s) 51, 95, 347
BsiHKAI GWGCWC 1 cut(s) 170
BsiHKCI CYCGRG 1 cut(s) 265
BsiSI CCGG 3 cut(s) 47, 343, 527
BslFI GGGAC 1 cut(s) 526
BslI CCNNNNNNNGG 6 cut(s) 213, 214, 285, 324, 348, 349
BsmFI GGGAC 1 cut(s) 526
BsmI GAATGC 1 cut(s) 456
BsnI GGCC 7 cut(s) 46, 50, 256, 316, 337, 346, 426
BsoBI CYCGRG 1 cut(s) 265
Bsp120I GGGCCC 1 cut(s) 314
Bsp1286I GDGCHC 3 cut(s) 170, 318, 558
Bsp143I GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
BspACI CCGC 4 cut(s) 253, 328, 371, 484
BspANI GGCC 7 cut(s) 46, 50, 256, 316, 337, 346, 426
BspFNI CGCG 1 cut(s) 160
BspLI GGNNCC 2 cut(s) 316, 317
BspPI GGATC 4 cut(s) 42, 143, 241, 301
BspQI GCTCTTC 1 cut(s) 672
BsrDI GCAATG 1 cut(s) 366
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 1 cut(s) 392
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 3 cut(s) 28, 266, 347
BssHII GCGCGC 1 cut(s) 158
BssMI GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
BssT1I CCWWGG 1 cut(s) 28
Bst4CI ACNGT 1 cut(s) 172
Bst6I CTCTTC 1 cut(s) 672
BstBAI YACGTR 1 cut(s) 422
BstC8I GCNNGC 3 cut(s) 48, 156, 160
BstDSI CCRYGG 1 cut(s) 347
BstF5I GGATG 1 cut(s) 663
BstFNI CGCG 1 cut(s) 160
BstHHI GCGC 2 cut(s) 160, 162
BstKTI GATC 8 cut(s) 37, 42, 59, 78, 138, 249, 296, 305
BstMBI GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
BstMCI CGRYCG 3 cut(s) 51, 95, 347
BstMWI GCNNNNNNNGC 5 cut(s) 113, 174, 250, 334, 343
BstSCI CCNGG 1 cut(s) 341
BstSLI GKGCMC 2 cut(s) 318, 558
BstUI CGCG 1 cut(s) 160
BstV1I GCAGC 1 cut(s) 125
BstX2I RGATCY 1 cut(s) 56
BstYI RGATCY 1 cut(s) 56
BstZI CGGCCG 2 cut(s) 48, 344
BsuRI GGCC 7 cut(s) 46, 50, 256, 316, 337, 346, 426
BtgI CCRYGG 1 cut(s) 347
BtsCI GGATG 1 cut(s) 663
BtsIMutI CAGTG 1 cut(s) 177
Cac8I GCNNGC 3 cut(s) 48, 156, 160
CfoI GCGC 2 cut(s) 160, 162
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 4 cut(s) 191, 314, 315, 336
Csp6I GTAC 1 cut(s) 432
CviAII CATG 2 cut(s) 117, 595
CviQI GTAC 1 cut(s) 432
DpnI GATC 8 cut(s) 36, 41, 58, 77, 137, 248, 295, 304
DpnII GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
EaeI YGGCCR 4 cut(s) 48, 254, 344, 424
EagI CGGCCG 2 cut(s) 48, 344
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
EclXI CGGCCG 2 cut(s) 48, 344
Eco130I CCWWGG 1 cut(s) 28
Eco24I GRGCYC 1 cut(s) 318
Eco47I GGWCC 1 cut(s) 191
Eco52I CGGCCG 2 cut(s) 48, 344
Eco88I CYCGRG 1 cut(s) 265
EcoO109I RGGNCCY 1 cut(s) 315
EcoRI GAATTC 1 cut(s) 378
EcoT14I CCWWGG 1 cut(s) 28
EcoT22I ATGCAT 1 cut(s) 456
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 28
FaeI CATG 2 cut(s) 120, 598
FaiI YATR 7 cut(s) 118, 196, 242, 307, 521, 596, 607
FalI AAGNNNNNCTT 2 cut(s) 634, 666
FaqI GGGAC 1 cut(s) 526
FatI CATG 2 cut(s) 116, 594
FauI CCCGC 1 cut(s) 364
FbaI TGATCA 1 cut(s) 75
Fnu4HI GCNGC 2 cut(s) 114, 254
FokI GGATG 1 cut(s) 670
FriOI GRGCYC 1 cut(s) 318
FseI GGCCGGCC 1 cut(s) 50
Fsp4HI GCNGC 2 cut(s) 114, 254
FspBI CTAG 1 cut(s) 29
GlaI GCGC 2 cut(s) 159, 161
GluI GCNGC 2 cut(s) 114, 254
GsaI CCCAGC 2 cut(s) 236, 293
GsuI CTGGAG 2 cut(s) 184, 409
HaeIII GGCC 7 cut(s) 46, 50, 256, 316, 337, 346, 426
HapII CCGG 3 cut(s) 47, 343, 527
HhaI GCGC 2 cut(s) 160, 162
Hin1II CATG 2 cut(s) 120, 598
Hin6I GCGC 2 cut(s) 158, 160
HinP1I GCGC 2 cut(s) 158, 160
HinfI GANTC 1 cut(s) 393
HpaII CCGG 3 cut(s) 47, 343, 527
HphI GGTGA 6 cut(s) 142, 220, 477, 498, 597, 630
Hpy166II GTNNAC 1 cut(s) 621
Hpy188I TCNGA 3 cut(s) 39, 298, 438
Hpy188III TCNNGA 2 cut(s) 60, 532
Hpy8I GTNNAC 1 cut(s) 621
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 2 cut(s) 462, 609
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4IV ACGT 2 cut(s) 198, 421
HpyCH4V TGCA 2 cut(s) 454, 641
HpyF10VI GCNNNNNNNGC 5 cut(s) 113, 174, 250, 334, 343
HpySE526I ACGT 2 cut(s) 198, 421
Hsp92II CATG 2 cut(s) 120, 598
HspAI GCGC 2 cut(s) 158, 160
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
Ksp22I TGATCA 1 cut(s) 75
Kzo9I GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 3 cut(s) 165, 438, 591
Lsp1109I GCAGC 1 cut(s) 125
LweI GCATC 1 cut(s) 186
MaeI CTAG 1 cut(s) 29
MaeII ACGT 2 cut(s) 198, 421
MaeIII GTNAC 2 cut(s) 13, 601
MalI GATC 8 cut(s) 36, 41, 58, 77, 137, 248, 295, 304
MboI GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
MboII GAAGA 4 cut(s) 501, 624, 659, 668
MflI RGATCY 1 cut(s) 56
MhlI GDGCHC 3 cut(s) 170, 318, 558
MlsI TGGCCA 1 cut(s) 426
MluCI AATT 3 cut(s) 378, 472, 478
MluNI TGGCCA 1 cut(s) 426
MlyI GAGTC 1 cut(s) 402
MmeI TCCRAC 1 cut(s) 303
MnlI CCTC 6 cut(s) 126, 261, 346, 528, 565, 576
Mox20I TGGCCA 1 cut(s) 426
Mph1103I ATGCAT 1 cut(s) 456
MroNI GCCGGC 1 cut(s) 46
MscI TGGCCA 1 cut(s) 426
MslI CAYNNNNRTG 1 cut(s) 599
Msp20I TGGCCA 1 cut(s) 426
MspA1I CMGCKG 1 cut(s) 253
MspI CCGG 3 cut(s) 47, 343, 527
MspR9I CCNGG 1 cut(s) 343
Mva1269I GAATGC 1 cut(s) 456
MvnI CGCG 1 cut(s) 160
MwoI GCNNNNNNNGC 5 cut(s) 113, 174, 250, 334, 343
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 1 cut(s) 343
NdeII GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
NgoMIV GCCGGC 1 cut(s) 46
NlaIII CATG 2 cut(s) 120, 598
NlaIV GGNNCC 2 cut(s) 316, 317
NmeAIII GCCGAG 1 cut(s) 76
NmuCI GTSAC 2 cut(s) 13, 601
NsiI ATGCAT 1 cut(s) 456
PauI GCGCGC 1 cut(s) 158
PciSI GCTCTTC 1 cut(s) 672
PctI GAATGC 1 cut(s) 456
PdiI GCCGGC 1 cut(s) 48
PkrI GCNGC 2 cut(s) 115, 255
PleI GAGTC 1 cut(s) 401
PpsI GAGTC 1 cut(s) 401
Ppu21I YACGTR 1 cut(s) 422
PsiI TTATAA 1 cut(s) 521
PspFI CCCAGC 2 cut(s) 232, 289
PspN4I GGNNCC 2 cut(s) 316, 317
PspOMI GGGCCC 1 cut(s) 314
PspPI GGNCC 4 cut(s) 191, 314, 315, 336
PsuI RGATCY 1 cut(s) 56
PteI GCGCGC 1 cut(s) 158
RigI GGCCGGCC 1 cut(s) 50
RsaI GTAC 1 cut(s) 433
RsaNI GTAC 1 cut(s) 432
RseI CAYNNNNRTG 1 cut(s) 599
SapI GCTCTTC 1 cut(s) 672
SatI GCNGC 2 cut(s) 114, 254
Sau3AI GATC 8 cut(s) 34, 39, 56, 75, 135, 246, 293, 302
Sau96I GGNCC 4 cut(s) 191, 314, 315, 336
SchI GAGTC 1 cut(s) 402
ScrFI CCNGG 1 cut(s) 343
SduI GDGCHC 3 cut(s) 170, 318, 558
SetI ASST 6 cut(s) 83, 201, 357, 424, 587, 620
SfaNI GCATC 1 cut(s) 186
SfiI GGCCNNNNNGGCC 1 cut(s) 343
SinI GGWCC 1 cut(s) 191
SmiMI CAYNNNNRTG 1 cut(s) 599
Sse9I AATT 3 cut(s) 378, 472, 478
SsiI CCGC 4 cut(s) 253, 328, 371, 484
SspMI CTAG 1 cut(s) 29
StyD4I CCNGG 1 cut(s) 341
StyI CCWWGG 1 cut(s) 28
TaaI ACNGT 1 cut(s) 172
TaiI ACGT 2 cut(s) 201, 424
TaqI TCGA 1 cut(s) 382
TaqII GACCGA 1 cut(s) 81
TasI AATT 3 cut(s) 378, 472, 478
TatI WGTACW 1 cut(s) 431
TauI GCSGC 1 cut(s) 256
TscAI CASTG 1 cut(s) 177
TseFI GTSAC 2 cut(s) 13, 601
TseI GCWGC 1 cut(s) 113
Tsp45I GTSAC 2 cut(s) 13, 601
TspDTI ATGAA 1 cut(s) 463
TspGWI ACGGA 1 cut(s) 297
TspRI CASTG 1 cut(s) 177
VpaK11BI GGWCC 1 cut(s) 191
XapI RAATTY 1 cut(s) 378
XcmI CCANNNNNNNNNTGG 1 cut(s) 286
XmaJI CCTAGG 1 cut(s) 28
XspI CTAG 1 cut(s) 29
Zsp2I ATGCAT 1 cut(s) 456
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.