Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

67669425 .. 67670891

Gene Structure 1467 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020692

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGAAGAAACCGGCAGAGCTCGTGTTCATCCCCTACGCGGGTGCCGGCCACCTCGTACCGACAGTTGAGATCGCCAAGCTCCTCGTATCTCGAGACGACCACCTCTTCATCACCGTCCTCATCATGAAGACACCCTTCGGCTCCACAGCCACCGACACCTATATAGACTCCATCGCCGCCGCCTCAGAAAAACGCATCAAGCTCATCAACCTCCCACAGCCCGACGTCGACTTCATAAACATGCCCCGCAGCACCTTCAGCAAAACGTTCGTCGAAAGCCACAAACCCTACGTCAGAGATGCTGTTGCCAAACTCGCCGAGTCAGCCGATCAGTCGACCCCTAGGCTCGCCGGGTTCGTCATCGACTTGGTTTGCTCCACTATGATCGACGTGGCCAACGAGTTCGGGGTTCCAACGTACATCTTCTTCACCTCCAACGCTTGCTTTCTAGGGCTCTTGTTCCACCTCCAGACGCTCGCCGACGAGCATGACGTGGACGTCACCGAGTTAAAGGACTCGGAGGCGGAGTTGTTAGTCCCGAGTTTCGTAAATCCGGTCCCCCCTAAAGCCCTGCCAAGATCACTTATGGAAAGAGAGGGGGCAGCGTTGTTTGCAAACTTAGCGAGAAGGTTCAGAGAGGCCAAGGGTATTTTGGTAAATACATTCTGGGAGCTAGAATCTCATGCGCTTCTTACTCTTAGTTCTAATGGCGAGATCCCTCCGGTGTATCCGGTGGGACCCGTACTGAAGTTGAAGAGTGAAGATGAAGTACACGTGGACCCAGACCAGGCCGGCCCAAAAAAGTCGGATATATTGAAATGGCTTGATGATCAACTTCCCTCTTCGGTAGTGTTCTTGTGCTTTGGGAGCCGGGGGAGTTTCGGTGAGGACCAGGTGAAAGAGATAGCATGTGCGCTAGAGCAGAGCGGGCACCGATTCTTGTGGTCGCTACGTCGGCCCCCACCAAAGGGCAAGAGTACTCTCCCTAGTGACTATGCCGATCCTACAGCCGTTTTGCCTGATGGATTTATCGGACGGACGGCTGGGATCGGGAAGGTCATAGGATGGGCTCCACAAGTAGACGTGTTGGCCCATCCGGCCGTCGGGGGTTTTGTATCTCATTGCGGGTGGAATTCCATTCTCGAGAGTTTATGGTTTGGGGTGCCAATCGCCACGTGGCCTATGTACGCAGAACAACAAATGAATGCATTTGAAATGGTGAGAGAATGGGGATTGGCCGTGAAAATCAGTGTGGAGTATGGCAGTGTGTTTCATAGTACTGCCGAAGAGAGGCAACTGGTTTTGGTTGCACAAGAGATAGAGAGAGGAATAAGGGAGGTGATGGAGCCTGATAGTACTGTAAGGAAGAGAGTGAAAGAGATGAGTGAAATGAGTAAGAGAGCGTTGATGGATGGTGGTTCTTCCTCCTCTTCATTGGGACGTTTTATTGATGAGATATTTCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

489

Amino Acids

53.85

Weight (kDa)

5.29

Isoelectric Point (pI)

45.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	264 - 416	3.9e-25	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	497
AatII	GACGTC	2 cut(s)	228, 501
AccB1I	GGYRCC	3 cut(s)	41, 930, 1162
AccBSI	CCGCTC	1 cut(s)	927
AccI	GTMKAC	3 cut(s)	228, 335, 1080
AccII	CGCG	1 cut(s)	38
AciI	CCGC	7 cut(s)	38, 177, 180, 247, 524, 927, 1125
AclI	AACGTT	1 cut(s)	266
AclWI	GGATC	3 cut(s)	709, 995, 1055
AcoI	YGGCCR	4 cut(s)	46, 393, 1098, 1236
AcsI	RAATTY	1 cut(s)	1132
AcuI	CTGAAG	2 cut(s)	241, 767
AcvI	CACGTG	2 cut(s)	775, 1176
AcyI	GRCGYC	2 cut(s)	225, 498
AfaI	GTAC	8 cut(s)	57, 419, 744, 771, 979, 1187, 1279, 1357
AfiI	CCNNNNNNNGG	7 cut(s)	37, 38, 787, 967, 968, 1103, 1290
AflIII	ACRYGT	2 cut(s)	772, 1083
AgsI	TTSAA	3 cut(s)	754, 817, 1214
AjiI	CACGTC	3 cut(s)	391, 493, 1084
AjnI	CCWGG	2 cut(s)	786, 891
AluBI	AGCT	4 cut(s)	19, 79, 202, 673
AluI	AGCT	4 cut(s)	19, 79, 202, 673
Alw21I	GWGCWC	1 cut(s)	21
Alw26I	GTCTC	1 cut(s)	87
AlwI	GGATC	3 cut(s)	709, 995, 1055
Ama87I	CYCGRG	3 cut(s)	90, 538, 1142
ApeKI	GCWGC	2 cut(s)	249, 602
ApoI	RAATTY	1 cut(s)	1132
ArsI	GACNNNNNNTTYG	4 cut(s)	255, 276, 287, 308
AspA2I	CCTAGG	1 cut(s)	341
AspLEI	GCGC	2 cut(s)	688, 916
AspS9I	GGNCC	7 cut(s)	556, 737, 778, 794, 889, 957, 1090
AsuC2I	CCSGG	2 cut(s)	352, 872
AsuHPI	GGTGA	7 cut(s)	103, 421, 493, 896, 907, 1231, 1351
AvaI	CYCGRG	3 cut(s)	90, 538, 1142
AvaII	GGWCC	4 cut(s)	556, 737, 778, 889
AvrII	CCTAGG	1 cut(s)	341
BaeGI	GKGCMC	1 cut(s)	933
BalI	TGGCCA	1 cut(s)	395
BanI	GGYRCC	3 cut(s)	41, 930, 1162
BanII	GRGCYC	3 cut(s)	21, 456, 1072
BarI	GAAGNNNNNNTAC	4 cut(s)	410, 442, 753, 785
BauI	CACGAG	1 cut(s)	20
BbrPI	CACGTG	2 cut(s)	775, 1176
BbsI	GAAGAC	1 cut(s)	134
Bbv12I	GWGCWC	1 cut(s)	21
BbvI	GCAGC	2 cut(s)	261, 614
BccI	CCATC	7 cut(s)	179, 1016, 1059, 1101, 1336, 1402, 1406
BceAI	ACGGC	4 cut(s)	995, 1056, 1085, 1223
BcgI	CGANNNNNNTGC	2 cut(s)	250, 284
BciT130I	CCWGG	2 cut(s)	788, 893
BciVI	GTATCC	1 cut(s)	738
BclI	TGATCA	1 cut(s)	829
BcnI	CCSGG	2 cut(s)	352, 872
BcoDI	GTCTC	1 cut(s)	87
BfaI	CTAG	5 cut(s)	342, 449, 674, 917, 987
BfmI	CTRYAG	1 cut(s)	1005
BfuI	GTATCC	1 cut(s)	738
BglI	GCCNNNNNGGC	1 cut(s)	1097
BisI	GCNGC	4 cut(s)	177, 180, 250, 603
BlnI	CCTAGG	1 cut(s)	341
BlsI	GCNGC	4 cut(s)	178, 181, 251, 604
BmcAI	AGTACT	3 cut(s)	979, 1279, 1357
Bme1390I	CCNGG	4 cut(s)	352, 788, 872, 893
Bme18I	GGWCC	4 cut(s)	556, 737, 778, 889
BmeT110I	CYCGRG	3 cut(s)	90, 538, 1142
BmgBI	CACGTC	3 cut(s)	391, 493, 1084
BmgT120I	GGNCC	7 cut(s)	556, 737, 778, 794, 889, 957, 1090
BmrFI	CCNGG	4 cut(s)	352, 788, 872, 893
BmsI	GCATC	2 cut(s)	204, 289
BpiI	GAAGAC	1 cut(s)	134
BpmI	CTGGAG	1 cut(s)	452
BpuMI	CCSGG	2 cut(s)	352, 872
BsaAI	YACGTR	2 cut(s)	775, 1176
BsaHI	GRCGYC	2 cut(s)	225, 498
BsaJI	CCNNGG	3 cut(s)	341, 642, 871
BsaWI	WCCGGW	3 cut(s)	553, 721, 730
BsaXI	ACNNNNNCTCC	4 cut(s)	512, 542, 868, 898
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 38, 787, 967, 968, 1103, 1290
Bse118I	RCCGGY	3 cut(s)	10, 44, 791
Bse1I	ACTGG	1 cut(s)	1302
Bse3DI	GCAATG	1 cut(s)	1120
BseBI	CCWGG	2 cut(s)	788, 893
BseDI	CCNNGG	3 cut(s)	341, 642, 871
BseGI	GGATG	4 cut(s)	27, 1070, 1093, 1417
BseLI	CCNNNNNNNGG	7 cut(s)	37, 38, 787, 967, 968, 1103, 1290
BseMI	GCAATG	1 cut(s)	1120
BseMII	CTCAG	1 cut(s)	198
BseNI	ACTGG	1 cut(s)	1302
BseRI	GAGGAG	2 cut(s)	71, 1417
BseSI	GKGCMC	1 cut(s)	933
BseX3I	CGGCCG	1 cut(s)	1098
BseXI	GCAGC	2 cut(s)	261, 614
BseYI	CCCAGC	1 cut(s)	1043
Bsh1236I	CGCG	1 cut(s)	38
Bsh1285I	CGRYCG	1 cut(s)	1101
BshNI	GGYRCC	3 cut(s)	41, 930, 1162
BsiEI	CGRYCG	1 cut(s)	1101
BsiHKAI	GWGCWC	1 cut(s)	21
BsiHKCI	CYCGRG	3 cut(s)	90, 538, 1142
BsiSI	CCGG	9 cut(s)	11, 45, 351, 554, 722, 731, 792, 871, 1097
BslFI	GGGAC	4 cut(s)	521, 542, 750, 1452
BslI	CCNNNNNNNGG	7 cut(s)	37, 38, 787, 967, 968, 1103, 1290
BsmAI	GTCTC	1 cut(s)	87
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	4 cut(s)	521, 542, 750, 1452
BsmI	GAATGC	1 cut(s)	1210
BsoBI	CYCGRG	3 cut(s)	90, 538, 1142
Bsp1286I	GDGCHC	4 cut(s)	21, 456, 933, 1072
Bsp143I	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
BspACI	CCGC	7 cut(s)	38, 177, 180, 247, 524, 927, 1125
BspCNI	CTCAG	1 cut(s)	197
BspFNI	CGCG	1 cut(s)	38
BspHI	TCATGA	1 cut(s)	123
BspPI	GGATC	3 cut(s)	709, 995, 1055
BspT107I	GGYRCC	3 cut(s)	41, 930, 1162
BsrBI	CCGCTC	1 cut(s)	927
BsrDI	GCAATG	1 cut(s)	1120
BsrFI	RCCGGY	3 cut(s)	10, 44, 791
BsrI	ACTGG	1 cut(s)	1302
BssAI	RCCGGY	3 cut(s)	10, 44, 791
BssECI	CCNNGG	3 cut(s)	341, 642, 871
BssMI	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
BssNI	GRCGYC	2 cut(s)	225, 498
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	2 cut(s)	341, 642
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	2 cut(s)	788, 893
Bst4CI	ACNGT	3 cut(s)	64, 115, 1360
Bst6I	CTCTTC	6 cut(s)	110, 749, 847, 1281, 1361, 1435
BstACI	GRCGYC	2 cut(s)	225, 498
BstBAI	YACGTR	2 cut(s)	775, 1176
BstC8I	GCNNGC	6 cut(s)	46, 348, 442, 477, 793, 929
BstDEI	CTNAG	3 cut(s)	184, 619, 698
BstF5I	GGATG	4 cut(s)	27, 1070, 1093, 1417
BstFNI	CGCG	1 cut(s)	38
BstHHI	GCGC	2 cut(s)	688, 916
BstKTI	GATC	8 cut(s)	72, 331, 387, 581, 717, 832, 1003, 1050
BstMAI	GTCTC	1 cut(s)	87
BstMBI	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
BstMCI	CGRYCG	1 cut(s)	1101
BstMWI	GCNNNNNNNGC	9 cut(s)	258, 314, 323, 611, 620, 867, 928, 955, 1097
BstNI	CCWGG	2 cut(s)	788, 893
BstNSI	RCATGY	2 cut(s)	244, 912
BstSCI	CCNGG	4 cut(s)	350, 786, 870, 891
BstSFI	CTRYAG	1 cut(s)	1005
BstSLI	GKGCMC	1 cut(s)	933
BstUI	CGCG	1 cut(s)	38
BstV1I	GCAGC	2 cut(s)	261, 614
BstV2I	GAAGAC	1 cut(s)	134
BstX2I	RGATCY	1 cut(s)	714
BstYI	RGATCY	1 cut(s)	714
BstZI	CGGCCG	1 cut(s)	1098
BsuI	GTATCC	1 cut(s)	738
BtgZI	GCGATG	1 cut(s)	157
BtrI	CACGTC	3 cut(s)	391, 493, 1084
BtsCI	GGATG	4 cut(s)	27, 1070, 1093, 1417
BtsI	GCAGTG	1 cut(s)	1270
BtsIMutI	CAGTG	2 cut(s)	1255, 1270
Cac8I	GCNNGC	6 cut(s)	46, 348, 442, 477, 793, 929
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	2 cut(s)	688, 916
Cfr10I	RCCGGY	3 cut(s)	10, 44, 791
Cfr13I	GGNCC	7 cut(s)	556, 737, 778, 794, 889, 957, 1090
CseI	GACGC	1 cut(s)	481
CsiI	ACCWGGT	1 cut(s)	891
Csp6I	GTAC	8 cut(s)	56, 418, 743, 770, 978, 1186, 1278, 1356
CviAII	CATG	5 cut(s)	124, 241, 488, 683, 909
CviQI	GTAC	8 cut(s)	56, 418, 743, 770, 978, 1186, 1278, 1356
DdeI	CTNAG	3 cut(s)	184, 619, 698
DpnI	GATC	8 cut(s)	71, 330, 386, 580, 716, 831, 1002, 1049
DpnII	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
DrdI	GACNNNNNNGTC	1 cut(s)	497
DseDI	GACNNNNNNGTC	1 cut(s)	497
EaeI	YGGCCR	4 cut(s)	46, 393, 1098, 1236
EagI	CGGCCG	1 cut(s)	1098
Eam1104I	CTCTTC	6 cut(s)	110, 749, 847, 1281, 1361, 1435
EarI	CTCTTC	6 cut(s)	110, 749, 847, 1281, 1361, 1435
EciI	GGCGGA	1 cut(s)	539
Ecl136II	GAGCTC	1 cut(s)	19
EclXI	CGGCCG	1 cut(s)	1098
Eco130I	CCWWGG	2 cut(s)	341, 642
Eco24I	GRGCYC	3 cut(s)	21, 456, 1072
Eco47I	GGWCC	4 cut(s)	556, 737, 778, 889
Eco52I	CGGCCG	1 cut(s)	1098
Eco53kI	GAGCTC	1 cut(s)	19
Eco57I	CTGAAG	2 cut(s)	241, 767
Eco72I	CACGTG	2 cut(s)	775, 1176
Eco88I	CYCGRG	3 cut(s)	90, 538, 1142
EcoICRI	GAGCTC	1 cut(s)	19
EcoO109I	RGGNCCY	1 cut(s)	737
EcoRI	GAATTC	1 cut(s)	1132
EcoRII	CCWGG	2 cut(s)	786, 891
EcoT14I	CCWWGG	2 cut(s)	341, 642
EcoT22I	ATGCAT	1 cut(s)	1210
EcoT38I	GRGCYC	3 cut(s)	21, 456, 1072
ErhI	CCWWGG	2 cut(s)	341, 642
Esp3I	CGTCTC	1 cut(s)	87
FaeI	CATG	5 cut(s)	127, 244, 491, 686, 912
FalI	AAGNNNNNCTT	2 cut(s)	119, 151
FaqI	GGGAC	4 cut(s)	521, 542, 750, 1452
FatI	CATG	5 cut(s)	123, 240, 487, 682, 908
FauI	CCCGC	4 cut(s)	31, 254, 920, 1118
FbaI	TGATCA	1 cut(s)	829
FblI	GTMKAC	3 cut(s)	228, 335, 1080
Fnu4HI	GCNGC	4 cut(s)	177, 180, 250, 603
FokI	GGATG	4 cut(s)	14, 1077, 1080, 1424
FriOI	GRGCYC	3 cut(s)	21, 456, 1072
FseI	GGCCGGCC	1 cut(s)	795
Fsp4HI	GCNGC	4 cut(s)	177, 180, 250, 603
FspBI	CTAG	5 cut(s)	342, 449, 674, 917, 987
GlaI	GCGC	2 cut(s)	687, 915
GluI	GCNGC	4 cut(s)	177, 180, 250, 603
GsaI	CCCAGC	1 cut(s)	1047
GsuI	CTGGAG	1 cut(s)	452
HapII	CCGG	9 cut(s)	11, 45, 351, 554, 722, 731, 792, 871, 1097
HgaI	GACGC	1 cut(s)	481
HhaI	GCGC	2 cut(s)	688, 916
Hin1I	GRCGYC	2 cut(s)	225, 498
Hin1II	CATG	5 cut(s)	127, 244, 491, 686, 912
Hin6I	GCGC	2 cut(s)	686, 914
HinP1I	GCGC	2 cut(s)	686, 914
HincII	GTYRAC	2 cut(s)	229, 336
HindII	GTYRAC	2 cut(s)	229, 336
HinfI	GANTC	5 cut(s)	167, 320, 515, 677, 936
HpaII	CCGG	9 cut(s)	11, 45, 351, 554, 722, 731, 792, 871, 1097
HphI	GGTGA	7 cut(s)	103, 421, 493, 896, 907, 1231, 1351
Hpy166II	GTNNAC	6 cut(s)	229, 336, 496, 772, 778, 1081
Hpy188I	TCNGA	6 cut(s)	187, 296, 520, 635, 808, 1034
Hpy188III	TCNNGA	8 cut(s)	90, 92, 124, 469, 538, 1051, 1142, 1144
Hpy8I	GTNNAC	6 cut(s)	229, 336, 496, 772, 778, 1081
Hpy99I	CGWCG	7 cut(s)	227, 230, 275, 392, 485, 957, 1106
HpyAV	CCTTC	4 cut(s)	145, 265, 621, 1048
HpyCH4III	ACNGT	3 cut(s)	64, 115, 1360
HpyCH4V	TGCA	3 cut(s)	614, 1208, 1310
HpyF10VI	GCNNNNNNNGC	9 cut(s)	258, 314, 323, 611, 620, 867, 928, 955, 1097
HpyF3I	CTNAG	3 cut(s)	184, 619, 698
Hsp92I	GRCGYC	2 cut(s)	225, 498
Hsp92II	CATG	5 cut(s)	127, 244, 491, 686, 912
HspAI	GCGC	2 cut(s)	686, 914
KflI	GGGWCCC	1 cut(s)	737
KroI	GCCGGC	2 cut(s)	44, 791
KroNI	GCCGGC	2 cut(s)	46, 793
Ksp22I	TGATCA	1 cut(s)	829
Kzo9I	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
LmnI	GCTCC	7 cut(s)	84, 146, 380, 670, 867, 1075, 1345
Lsp1109I	GCAGC	2 cut(s)	261, 614
LweI	GCATC	2 cut(s)	204, 289
MabI	ACCWGGT	1 cut(s)	891
MaeI	CTAG	5 cut(s)	342, 449, 674, 917, 987
MaeIII	GTNAC	2 cut(s)	499, 989
MalI	GATC	8 cut(s)	71, 330, 386, 580, 716, 831, 1002, 1049
MbiI	CCGCTC	1 cut(s)	927
MboI	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
MflI	RGATCY	1 cut(s)	714
MhlI	GDGCHC	4 cut(s)	21, 456, 933, 1072
MlsI	TGGCCA	1 cut(s)	395
MluCI	AATT	1 cut(s)	1132
MluNI	TGGCCA	1 cut(s)	395
MlyI	GAGTC	3 cut(s)	161, 329, 509
MmeI	TCCRAC	3 cut(s)	437, 459, 786
Mox20I	TGGCCA	1 cut(s)	395
Mph1103I	ATGCAT	1 cut(s)	1210
MroNI	GCCGGC	2 cut(s)	44, 791
MscI	TGGCCA	1 cut(s)	395
MseI	TTAA	1 cut(s)	509
MslI	CAYNNNNRTG	1 cut(s)	239
Msp20I	TGGCCA	1 cut(s)	395
MspI	CCGG	9 cut(s)	11, 45, 351, 554, 722, 731, 792, 871, 1097
MspR9I	CCNGG	4 cut(s)	352, 788, 872, 893
Mva1269I	GAATGC	1 cut(s)	1210
MvaI	CCWGG	2 cut(s)	788, 893
MvnI	CGCG	1 cut(s)	38
MwoI	GCNNNNNNNGC	9 cut(s)	258, 314, 323, 611, 620, 867, 928, 955, 1097
NaeI	GCCGGC	2 cut(s)	46, 793
NciI	CCSGG	2 cut(s)	352, 872
NdeII	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
NgoMIV	GCCGGC	2 cut(s)	44, 791
NlaIII	CATG	5 cut(s)	127, 244, 491, 686, 912
NmeAIII	GCCGAG	1 cut(s)	343
NmuCI	GTSAC	2 cut(s)	499, 989
NsiI	ATGCAT	1 cut(s)	1210
NspI	RCATGY	2 cut(s)	244, 912
PaeR7I	CTCGAG	2 cut(s)	90, 1142
PagI	TCATGA	1 cut(s)	123
PcsI	WCGNNNNNNNCGW	3 cut(s)	354, 396, 489
PctI	GAATGC	1 cut(s)	1210
PdiI	GCCGGC	2 cut(s)	46, 793
PfeI	GAWTC	2 cut(s)	677, 936
PkrI	GCNGC	4 cut(s)	178, 181, 251, 604
PleI	GAGTC	3 cut(s)	161, 328, 509
PmaCI	CACGTG	2 cut(s)	775, 1176
PmlI	CACGTG	2 cut(s)	775, 1176
PpsI	GAGTC	3 cut(s)	161, 328, 509
Ppu21I	YACGTR	2 cut(s)	775, 1176
PpuMI	RGGWCCY	1 cut(s)	737
Psp124BI	GAGCTC	1 cut(s)	21
Psp1406I	AACGTT	1 cut(s)	266
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	2 cut(s)	786, 891
PspCI	CACGTG	2 cut(s)	775, 1176
PspFI	CCCAGC	1 cut(s)	1043
PspGI	CCWGG	2 cut(s)	786, 891
PspPI	GGNCC	7 cut(s)	556, 737, 778, 794, 889, 957, 1090
PspPPI	RGGWCCY	1 cut(s)	737
PsuI	RGATCY	1 cut(s)	714
RigI	GGCCGGCC	1 cut(s)	795
RsaI	GTAC	8 cut(s)	57, 419, 744, 771, 979, 1187, 1279, 1357
RsaNI	GTAC	8 cut(s)	56, 418, 743, 770, 978, 1186, 1278, 1356
RseI	CAYNNNNRTG	1 cut(s)	239
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	2 cut(s)	227, 334
SaqAI	TTAA	1 cut(s)	509
SatI	GCNGC	4 cut(s)	177, 180, 250, 603
Sau3AI	GATC	8 cut(s)	69, 328, 384, 578, 714, 829, 1000, 1047
Sau96I	GGNCC	7 cut(s)	556, 737, 778, 794, 889, 957, 1090
ScaI	AGTACT	3 cut(s)	979, 1279, 1357
SchI	GAGTC	3 cut(s)	161, 329, 509
ScrFI	CCNGG	4 cut(s)	352, 788, 872, 893
SduI	GDGCHC	4 cut(s)	21, 456, 933, 1072
SexAI	ACCWGGT	1 cut(s)	891
SfaNI	GCATC	2 cut(s)	204, 289
SfcI	CTRYAG	1 cut(s)	1005
SfiI	GGCCNNNNNGGCC	1 cut(s)	1097
Sfr274I	CTCGAG	2 cut(s)	90, 1142
SinI	GGWCC	4 cut(s)	556, 737, 778, 889
SlaI	CTCGAG	2 cut(s)	90, 1142
SmiMI	CAYNNNNRTG	1 cut(s)	239
SmlI	CTYRAG	2 cut(s)	90, 1142
SmoI	CTYRAG	2 cut(s)	90, 1142
Sse9I	AATT	1 cut(s)	1132
SsiI	CCGC	7 cut(s)	38, 177, 180, 247, 524, 927, 1125
SspMI	CTAG	5 cut(s)	342, 449, 674, 917, 987
SstI	GAGCTC	1 cut(s)	21
StyD4I	CCNGG	4 cut(s)	350, 786, 870, 891
StyI	CCWWGG	2 cut(s)	341, 642
TaaI	ACNGT	3 cut(s)	64, 115, 1360
TaqI	TCGA	7 cut(s)	91, 228, 273, 335, 363, 387, 1143
TasI	AATT	1 cut(s)	1132
TatI	WGTACW	4 cut(s)	769, 977, 1277, 1355
TauI	GCSGC	2 cut(s)	179, 182
TfiI	GAWTC	2 cut(s)	677, 936
Tru1I	TTAA	1 cut(s)	509
Tru9I	TTAA	1 cut(s)	509
TscAI	CASTG	2 cut(s)	1255, 1270
TseFI	GTSAC	2 cut(s)	499, 989
TseI	GCWGC	2 cut(s)	249, 602
Tsp45I	GTSAC	2 cut(s)	499, 989
TspDTI	ATGAA	9 cut(s)	16, 17, 97, 140, 223, 780, 1217, 1262, 1422
TspGWI	ACGGA	1 cut(s)	1051
TspRI	CASTG	2 cut(s)	1255, 1270
VpaK11BI	GGWCC	4 cut(s)	556, 737, 778, 889
XapI	RAATTY	1 cut(s)	1132
XceI	RCATGY	2 cut(s)	244, 912
XcmI	CCANNNNNNNNNTGG	2 cut(s)	649, 1173
XhoI	CTCGAG	2 cut(s)	90, 1142
XmaJI	CCTAGG	1 cut(s)	341
XmiI	GTMKAC	3 cut(s)	228, 335, 1080
XspI	CTAG	5 cut(s)	342, 449, 674, 917, 987
ZraI	GACGTC	2 cut(s)	226, 499
ZrmI	AGTACT	3 cut(s)	979, 1279, 1357
Zsp2I	ATGCAT	1 cut(s)	1210

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.