Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

67048177 .. 67051143

Gene Structure 2967 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G041150.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGCCACTGCATAATGAACCTAGAGAGTTGGTCTTCATCACAGCGCCAGGTATTGGCCATCTCGTATCAACCGTCGAGATTGCAAAGCTCCTCGTTGATCGAGATGACCAAATTTTCGTCACAATTCTCATAATGAAGTTTCCCTTTGACGACTCCAACCCCAAAGGTTCTGGAGAAGACTACTACTCCTCCATTTCACCGCGCATCAAGTTCATCAGCCTCCCAGAGCTCAACATAGACACAAAAGGAATGGGACCTTCCGCCTTCTTCAAAATATTTGTTGAAAACCAGAAACCTAACGTTACAGACTTGGTCACCAAACTCACCGAGTCTCAGTCCGAGTCCAAGCCTCGACTCGCCGGGTTTGTCATTGACATGTTCTGCACTACCATGATCGATGTGGCCAATGAATTTGGGGTTCCTACTTACGTTTTCTTCACGTCCAACGCAGCGTGTCTTGGGTTCTTTCTACACCTCCAAGCCATTTGTGATGAGGAAAACAAGGACGTTTCCGAGTTCTTGGAGTCGGGGGCCGATTTATCTCTGCCGAGTTTTATCAATCCGCTGCCTCATGGAGTTTTGACTAGTGTTTTTCCAGACAAGGAGGGCGCCCATGCATTCCTCAACCATGCAAGAAGGTTTAGAGAAACCAAGGGTATTTTGGTAAACACGTTCTTGGAGTTGGAGTCACATGCTTTGCACTCTCTTTCCGATGGTAAAGTCCCGCCGGTGTACCCCGTGGGGCCCTTACTGAACTTGAAAAATGATGATGACCAACCGAAGTCCGATATCTTGGAGTGGCTTGAGGATCAGCCTCCCTTATCTGTAGTGTTCCTGTGCTTCGGAAGCATGGGAAGTTTTGCTGAGGATCAGGTGAAAGAGATAGCGTGTGCGTTGGAGCAAAGTGGATATCGGTTCTTGTGGTCCTTACGTCAGCCCCCACCAAAGGGTAAGATAGCTTTCCCAAGCGATTACGTAGATGCCAAGGCAGTATTGCCGGAAGGATTTCTCGATCGGACGGCTGGGATCGGAAAAACCATAGGTTGGGCCCCACAAATTGATATCTTGGCCCACCCTTCGATTGGAGGGTTTGTATCCCACTGTGGATGGAACTCTACGCTTGAGAGTCTGTGGTATGGTGTACCGATTGCCACGTGGCCAATGTACGCAGAACAACAATTGAATGCCTTTGGGCTGGTGAGGGAATTGGAATTGGCCGTGGAAGTTGACATGAACTATCGGAAAGATGGTCAAATGGTTTTGAGTGCACAAGTCATAGAGAAAGGGATAAGGCAAGTGATGGAGCAGGATAGTGATATAAGGAAAAAGGTAAAAGAGACGAGTGAAAAGAGCAAGAAAGCTTTAACAGGGTCGTCACACTCTTCGTTAGGTCATTTTATTGATCAGATAATTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

472

Amino Acids

52.41

Weight (kDa)

5.05

Isoelectric Point (pI)

40.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	274 - 399	1.2e-21	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	608
AccB7I	CCANNNNNTGG	2 cut(s)	53, 1044
AccII	CGCG	1 cut(s)	202
AciI	CCGC	4 cut(s)	200, 261, 563, 725
AclI	AACGTT	1 cut(s)	300
AclWI	GGATC	3 cut(s)	816, 876, 1034
AcoI	YGGCCR	4 cut(s)	55, 402, 1157, 1215
AcsI	RAATTY	2 cut(s)	111, 410
AcvI	CACGTG	1 cut(s)	1155
AcyI	GRCGYC	1 cut(s)	609
AfaI	GTAC	3 cut(s)	734, 1143, 1166
AfiI	CCNNNNNNNGG	5 cut(s)	53, 946, 947, 1044, 1082
AflIII	ACRYGT	2 cut(s)	375, 669
AgsI	TTSAA	4 cut(s)	271, 284, 760, 1183
AhlI	ACTAGT	1 cut(s)	584
AjiI	CACGTC	1 cut(s)	441
AjnI	CCWGG	1 cut(s)	46
AluBI	AGCT	4 cut(s)	88, 229, 959, 1361
AluI	AGCT	4 cut(s)	88, 229, 959, 1361
Alw21I	GWGCWC	2 cut(s)	231, 1270
Alw26I	GTCTC	2 cut(s)	336, 1331
Alw44I	GTGCAC	1 cut(s)	1266
AlwI	GGATC	3 cut(s)	816, 876, 1034
AoxI	GGCC	8 cut(s)	55, 402, 531, 743, 1047, 1068, 1157, 1215
ApaI	GGGCCC	2 cut(s)	747, 1051
ApaLI	GTGCAC	1 cut(s)	1266
ApeKI	GCWGC	2 cut(s)	449, 565
ApoI	RAATTY	2 cut(s)	111, 410
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
Asp700I	GAANNNNTTC	1 cut(s)	1005
AspLEI	GCGC	3 cut(s)	46, 204, 611
AspS9I	GGNCC	8 cut(s)	254, 531, 743, 744, 924, 1047, 1048, 1069
AsuC2I	CCSGG	1 cut(s)	361
AsuHPI	GGTGA	5 cut(s)	189, 307, 316, 886, 1210
AvaII	GGWCC	2 cut(s)	254, 924
BaeGI	GKGCMC	3 cut(s)	747, 1051, 1270
BalI	TGGCCA	3 cut(s)	57, 404, 1159
BanI	GGYRCC	1 cut(s)	608
BanII	GRGCYC	3 cut(s)	231, 747, 1051
BbrPI	CACGTG	1 cut(s)	1155
BbsI	GAAGAC	2 cut(s)	25, 183
Bbv12I	GWGCWC	2 cut(s)	231, 1270
BbvCI	CCTCAGC	1 cut(s)	864
BbvI	GCAGC	2 cut(s)	461, 552
BccI	CCATC	5 cut(s)	66, 707, 1101, 1241, 1294
BceAI	ACGGC	2 cut(s)	1035, 1202
BciT130I	CCWGG	1 cut(s)	48
BciVI	GTATCC	1 cut(s)	1105
BclI	TGATCA	1 cut(s)	1402
BcnI	CCSGG	1 cut(s)	361
BcoDI	GTCTC	2 cut(s)	336, 1331
BcuI	ACTAGT	1 cut(s)	584
BfaI	CTAG	2 cut(s)	21, 585
BfmI	CTRYAG	1 cut(s)	825
BfoI	RGCGCY	2 cut(s)	47, 612
BfuI	GTATCC	1 cut(s)	1105
BisI	GCNGC	2 cut(s)	450, 566
BlsI	GCNGC	2 cut(s)	451, 567
Bme1390I	CCNGG	2 cut(s)	48, 361
Bme18I	GGWCC	2 cut(s)	254, 924
BmgBI	CACGTC	1 cut(s)	441
BmgT120I	GGNCC	8 cut(s)	254, 531, 743, 744, 924, 1047, 1048, 1069
BmiI	GGNNCC	8 cut(s)	255, 420, 532, 610, 744, 745, 1049, 1050
BmrFI	CCNGG	2 cut(s)	48, 361
BmsI	GCATC	2 cut(s)	213, 970
BpiI	GAAGAC	2 cut(s)	25, 183
BpmI	CTGGAG	1 cut(s)	192
Bpu10I	CCTNAGC	1 cut(s)	864
BpuEI	CTTGAG	2 cut(s)	824, 1142
BpuMI	CCSGG	1 cut(s)	361
Bsa29I	ATCGAT	1 cut(s)	396
BsaAI	YACGTR	2 cut(s)	976, 1155
BsaHI	GRCGYC	1 cut(s)	609
BsaJI	CCNNGG	4 cut(s)	651, 738, 984, 1218
BsaXI	ACNNNNNCTCC	8 cut(s)	170, 173, 200, 203, 671, 701, 1077, 1107
Bsc4I	CCNNNNNNNGG	5 cut(s)	53, 946, 947, 1044, 1082
Bse118I	RCCGGY	1 cut(s)	727
BseBI	CCWGG	1 cut(s)	48
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	4 cut(s)	651, 738, 984, 1218
BseGI	GGATG	1 cut(s)	1112
BseLI	CCNNNNNNNGG	5 cut(s)	53, 946, 947, 1044, 1082
BseMII	CTCAG	2 cut(s)	347, 855
BseRI	GAGGAG	2 cut(s)	80, 178
BseSI	GKGCMC	3 cut(s)	747, 1051, 1270
BseXI	GCAGC	2 cut(s)	461, 552
BseYI	CCCAGC	1 cut(s)	1022
BsgI	GTGCAG	1 cut(s)	367
Bsh1236I	CGCG	1 cut(s)	202
Bsh1285I	CGRYCG	1 cut(s)	1015
BshFI	GGCC	8 cut(s)	57, 404, 533, 745, 1049, 1070, 1159, 1217
BshNI	GGYRCC	1 cut(s)	608
BshVI	ATCGAT	1 cut(s)	396
BsiEI	CGRYCG	1 cut(s)	1015
BsiHKAI	GWGCWC	2 cut(s)	231, 1270
BsiSI	CCGG	3 cut(s)	360, 728, 998
BslFI	GGGAC	2 cut(s)	267, 707
BslI	CCNNNNNNNGG	5 cut(s)	53, 946, 947, 1044, 1082
BsmAI	GTCTC	2 cut(s)	336, 1331
BsmBI	CGTCTC	1 cut(s)	1331
BsmFI	GGGAC	2 cut(s)	267, 707
BsmI	GAATGC	2 cut(s)	617, 1189
BsnI	GGCC	8 cut(s)	57, 404, 533, 745, 1049, 1070, 1159, 1217
Bsp120I	GGGCCC	2 cut(s)	743, 1047
Bsp1286I	GDGCHC	4 cut(s)	231, 747, 1051, 1270
Bsp143I	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
BspACI	CCGC	4 cut(s)	200, 261, 563, 725
BspANI	GGCC	8 cut(s)	57, 404, 533, 745, 1049, 1070, 1159, 1217
BspCNI	CTCAG	2 cut(s)	346, 856
BspDI	ATCGAT	1 cut(s)	396
BspFNI	CGCG	1 cut(s)	202
BspLI	GGNNCC	8 cut(s)	255, 420, 532, 610, 744, 745, 1049, 1050
BspPI	GGATC	3 cut(s)	816, 876, 1034
BspT107I	GGYRCC	1 cut(s)	608
BsrFI	RCCGGY	1 cut(s)	727
BssAI	RCCGGY	1 cut(s)	727
BssECI	CCNNGG	4 cut(s)	651, 738, 984, 1218
BssMI	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
BssNI	GRCGYC	1 cut(s)	609
BssT1I	CCWWGG	2 cut(s)	651, 984
Bst2UI	CCWGG	1 cut(s)	48
Bst4CI	ACNGT	2 cut(s)	73, 1103
Bst6I	CTCTTC	1 cut(s)	1387
BstACI	GRCGYC	1 cut(s)	609
BstBAI	YACGTR	2 cut(s)	976, 1155
BstDEI	CTNAG	2 cut(s)	333, 864
BstDSI	CCRYGG	2 cut(s)	738, 1218
BstEII	GGTNACC	1 cut(s)	313
BstF5I	GGATG	1 cut(s)	1112
BstFNI	CGCG	1 cut(s)	202
BstH2I	RGCGCY	2 cut(s)	47, 612
BstHHI	GCGC	3 cut(s)	46, 204, 611
BstKTI	GATC	7 cut(s)	100, 396, 811, 871, 1015, 1029, 1405
BstMAI	GTCTC	2 cut(s)	336, 1331
BstMBI	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
BstMCI	CGRYCG	1 cut(s)	1015
BstMWI	GCNNNNNNNGC	1 cut(s)	846
BstNI	CCWGG	1 cut(s)	48
BstNSI	RCATGY	2 cut(s)	379, 695
BstPI	GGTNACC	1 cut(s)	313
BstSCI	CCNGG	2 cut(s)	46, 359
BstSFI	CTRYAG	1 cut(s)	825
BstSLI	GKGCMC	3 cut(s)	747, 1051, 1270
BstSNI	TACGTA	1 cut(s)	976
BstUI	CGCG	1 cut(s)	202
BstV1I	GCAGC	2 cut(s)	461, 552
BstV2I	GAAGAC	2 cut(s)	25, 183
Bsu15I	ATCGAT	1 cut(s)	396
BsuI	GTATCC	1 cut(s)	1105
BsuRI	GGCC	8 cut(s)	57, 404, 533, 745, 1049, 1070, 1159, 1217
BsuTUI	ATCGAT	1 cut(s)	396
BtgI	CCRYGG	2 cut(s)	738, 1218
BtrI	CACGTC	1 cut(s)	441
BtsCI	GGATG	1 cut(s)	1112
BtsI	GCAGTG	1 cut(s)	5
BtsIMutI	CAGTG	2 cut(s)	5, 1099
CfoI	GCGC	3 cut(s)	46, 204, 611
Cfr10I	RCCGGY	1 cut(s)	727
Cfr13I	GGNCC	8 cut(s)	254, 531, 743, 744, 924, 1047, 1048, 1069
ClaI	ATCGAT	1 cut(s)	396
Csp6I	GTAC	3 cut(s)	733, 1142, 1165
CviAII	CATG	8 cut(s)	376, 391, 572, 614, 629, 692, 850, 1231
CviQI	GTAC	3 cut(s)	733, 1142, 1165
DdeI	CTNAG	2 cut(s)	333, 864
DinI	GGCGCC	1 cut(s)	610
DpnI	GATC	7 cut(s)	99, 395, 810, 870, 1014, 1028, 1404
DpnII	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
EaeI	YGGCCR	4 cut(s)	55, 402, 1157, 1215
Eam1104I	CTCTTC	1 cut(s)	1387
EarI	CTCTTC	1 cut(s)	1387
EciI	GGCGGA	1 cut(s)	250
Ecl136II	GAGCTC	1 cut(s)	229
Eco105I	TACGTA	1 cut(s)	976
Eco130I	CCWWGG	2 cut(s)	651, 984
Eco24I	GRGCYC	3 cut(s)	231, 747, 1051
Eco32I	GATATC	3 cut(s)	790, 911, 1063
Eco47I	GGWCC	2 cut(s)	254, 924
Eco53kI	GAGCTC	1 cut(s)	229
Eco72I	CACGTG	1 cut(s)	1155
Eco91I	GGTNACC	1 cut(s)	313
EcoICRI	GAGCTC	1 cut(s)	229
EcoO109I	RGGNCCY	4 cut(s)	254, 743, 744, 1048
EcoO65I	GGTNACC	1 cut(s)	313
EcoRII	CCWGG	1 cut(s)	46
EcoRV	GATATC	3 cut(s)	790, 911, 1063
EcoT14I	CCWWGG	2 cut(s)	651, 984
EcoT22I	ATGCAT	1 cut(s)	619
EcoT38I	GRGCYC	3 cut(s)	231, 747, 1051
EgeI	GGCGCC	1 cut(s)	610
EheI	GGCGCC	1 cut(s)	610
ErhI	CCWWGG	2 cut(s)	651, 984
Esp3I	CGTCTC	1 cut(s)	1331
FaeI	CATG	8 cut(s)	379, 394, 575, 617, 632, 695, 853, 1234
FalI	AAGNNNNNCTT	2 cut(s)	128, 160
FaqI	GGGAC	2 cut(s)	267, 707
FatI	CATG	8 cut(s)	375, 390, 571, 613, 628, 691, 849, 1230
FauI	CCCGC	1 cut(s)	732
FbaI	TGATCA	1 cut(s)	1402
Fnu4HI	GCNGC	2 cut(s)	450, 566
FokI	GGATG	1 cut(s)	1119
FriOI	GRGCYC	3 cut(s)	231, 747, 1051
Fsp4HI	GCNGC	2 cut(s)	450, 566
FspBI	CTAG	2 cut(s)	21, 585
GlaI	GCGC	3 cut(s)	45, 203, 610
GluI	GCNGC	2 cut(s)	450, 566
GsaI	CCCAGC	1 cut(s)	1026
GsuI	CTGGAG	1 cut(s)	192
HaeII	RGCGCY	2 cut(s)	47, 612
HaeIII	GGCC	8 cut(s)	57, 404, 533, 745, 1049, 1070, 1159, 1217
HapII	CCGG	3 cut(s)	360, 728, 998
HhaI	GCGC	3 cut(s)	46, 204, 611
Hin1I	GRCGYC	1 cut(s)	609
Hin1II	CATG	8 cut(s)	379, 394, 575, 617, 632, 695, 853, 1234
Hin6I	GCGC	3 cut(s)	44, 202, 609
HinP1I	GCGC	3 cut(s)	44, 202, 609
HincII	GTYRAC	1 cut(s)	1228
HindII	GTYRAC	1 cut(s)	1228
HindIII	AAGCTT	1 cut(s)	1359
HinfI	GANTC	7 cut(s)	152, 329, 341, 354, 524, 686, 1126
HpaII	CCGG	3 cut(s)	360, 728, 998
HphI	GGTGA	5 cut(s)	189, 307, 316, 886, 1210
Hpy166II	GTNNAC	5 cut(s)	667, 733, 1142, 1228, 1268
Hpy188I	TCNGA	9 cut(s)	340, 514, 712, 787, 845, 1017, 1031, 1242, 1407
Hpy188III	TCNNGA	5 cut(s)	76, 101, 171, 596, 1010
Hpy8I	GTNNAC	5 cut(s)	667, 733, 1142, 1228, 1268
Hpy99I	CGWCG	1 cut(s)	77
HpyAV	CCTTC	5 cut(s)	267, 274, 630, 995, 1086
HpyCH4III	ACNGT	2 cut(s)	73, 1103
HpyCH4IV	ACGT	8 cut(s)	300, 429, 440, 507, 671, 931, 975, 1154
HpyCH4V	TGCA	7 cut(s)	10, 83, 384, 617, 632, 700, 1268
HpyF10VI	GCNNNNNNNGC	1 cut(s)	846
HpyF3I	CTNAG	2 cut(s)	333, 864
HpySE526I	ACGT	8 cut(s)	300, 429, 440, 507, 671, 931, 975, 1154
Hsp92I	GRCGYC	1 cut(s)	609
Hsp92II	CATG	8 cut(s)	379, 394, 575, 617, 632, 695, 853, 1234
HspAI	GCGC	3 cut(s)	44, 202, 609
KasI	GGCGCC	1 cut(s)	608
Ksp22I	TGATCA	1 cut(s)	1402
Kzo9I	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
LmnI	GCTCC	3 cut(s)	93, 898, 1303
Lsp1109I	GCAGC	2 cut(s)	461, 552
LweI	GCATC	2 cut(s)	213, 970
MaeI	CTAG	2 cut(s)	21, 585
MaeII	ACGT	8 cut(s)	300, 429, 440, 507, 671, 931, 975, 1154
MaeIII	GTNAC	5 cut(s)	118, 301, 313, 687, 1374
MalI	GATC	7 cut(s)	99, 395, 810, 870, 1014, 1028, 1404
MboI	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
MboII	GAAGA	5 cut(s)	25, 188, 259, 427, 1374
MfeI	CAATTG	1 cut(s)	1178
MhlI	GDGCHC	4 cut(s)	231, 747, 1051, 1270
MlsI	TGGCCA	3 cut(s)	57, 404, 1159
MluCI	AATT	8 cut(s)	111, 123, 410, 1056, 1178, 1205, 1211, 1410
MluNI	TGGCCA	3 cut(s)	57, 404, 1159
Mly113I	GGCGCC	1 cut(s)	609
MlyI	GAGTC	7 cut(s)	146, 338, 348, 350, 533, 695, 1135
MmeI	TCCRAC	4 cut(s)	180, 468, 663, 876
Mox20I	TGGCCA	3 cut(s)	57, 404, 1159
Mph1103I	ATGCAT	1 cut(s)	619
MroXI	GAANNNNTTC	1 cut(s)	1005
MscI	TGGCCA	3 cut(s)	57, 404, 1159
MseI	TTAA	2 cut(s)	1364, 1417
MslI	CAYNNNNRTG	2 cut(s)	374, 389
Msp20I	TGGCCA	3 cut(s)	57, 404, 1159
MspA1I	CMGCKG	1 cut(s)	565
MspI	CCGG	3 cut(s)	360, 728, 998
MspR9I	CCNGG	2 cut(s)	48, 361
MunI	CAATTG	1 cut(s)	1178
Mva1269I	GAATGC	2 cut(s)	617, 1189
MvaI	CCWGG	1 cut(s)	48
MvnI	CGCG	1 cut(s)	202
MwoI	GCNNNNNNNGC	1 cut(s)	846
NarI	GGCGCC	1 cut(s)	609
NciI	CCSGG	1 cut(s)	361
NdeII	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
NlaIII	CATG	8 cut(s)	379, 394, 575, 617, 632, 695, 853, 1234
NlaIV	GGNNCC	8 cut(s)	255, 420, 532, 610, 744, 745, 1049, 1050
NmeAIII	GCCGAG	1 cut(s)	573
NmuCI	GTSAC	4 cut(s)	118, 313, 687, 1374
NsiI	ATGCAT	1 cut(s)	619
NspI	RCATGY	2 cut(s)	379, 695
PciI	ACATGT	1 cut(s)	375
PcsI	WCGNNNNNNNCGW	1 cut(s)	69
PctI	GAATGC	2 cut(s)	617, 1189
PdmI	GAANNNNTTC	1 cut(s)	1005
PflFI	GACNNNGTC	1 cut(s)	311
PflMI	CCANNNNNTGG	2 cut(s)	53, 1044
PkrI	GCNGC	2 cut(s)	451, 567
Ple19I	CGATCG	1 cut(s)	1015
PleI	GAGTC	7 cut(s)	146, 337, 348, 349, 532, 694, 1134
PluTI	GGCGCC	1 cut(s)	612
PmaCI	CACGTG	1 cut(s)	1155
PmlI	CACGTG	1 cut(s)	1155
PpsI	GAGTC	7 cut(s)	146, 337, 348, 349, 532, 694, 1134
Ppu21I	YACGTR	2 cut(s)	976, 1155
PpuMI	RGGWCCY	1 cut(s)	254
PscI	ACATGT	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	231
Psp1406I	AACGTT	1 cut(s)	300
Psp5II	RGGWCCY	1 cut(s)	254
Psp6I	CCWGG	1 cut(s)	46
PspCI	CACGTG	1 cut(s)	1155
PspEI	GGTNACC	1 cut(s)	313
PspFI	CCCAGC	1 cut(s)	1022
PspGI	CCWGG	1 cut(s)	46
PspN4I	GGNNCC	8 cut(s)	255, 420, 532, 610, 744, 745, 1049, 1050
PspOMI	GGGCCC	2 cut(s)	743, 1047
PspPI	GGNCC	8 cut(s)	254, 531, 743, 744, 924, 1047, 1048, 1069
PspPPI	RGGWCCY	1 cut(s)	254
PsyI	GACNNNGTC	1 cut(s)	311
PvuI	CGATCG	1 cut(s)	1015
RsaI	GTAC	3 cut(s)	734, 1143, 1166
RsaNI	GTAC	3 cut(s)	733, 1142, 1165
RseI	CAYNNNNRTG	2 cut(s)	374, 389
SacI	GAGCTC	1 cut(s)	231
SaqAI	TTAA	2 cut(s)	1364, 1417
SatI	GCNGC	2 cut(s)	450, 566
Sau3AI	GATC	7 cut(s)	97, 393, 808, 868, 1012, 1026, 1402
Sau96I	GGNCC	8 cut(s)	254, 531, 743, 744, 924, 1047, 1048, 1069
SchI	GAGTC	7 cut(s)	146, 338, 348, 350, 533, 695, 1135
ScrFI	CCNGG	2 cut(s)	48, 361
SduI	GDGCHC	4 cut(s)	231, 747, 1051, 1270
SfaNI	GCATC	2 cut(s)	213, 970
SfcI	CTRYAG	1 cut(s)	825
SfoI	GGCGCC	1 cut(s)	610
SgrAI	CRCCGGYG	1 cut(s)	727
SinI	GGWCC	2 cut(s)	254, 924
SmiMI	CAYNNNNRTG	2 cut(s)	374, 389
SmlI	CTYRAG	2 cut(s)	803, 1121
SmoI	CTYRAG	2 cut(s)	803, 1121
SnaBI	TACGTA	1 cut(s)	976
SpeI	ACTAGT	1 cut(s)	584
Sse9I	AATT	8 cut(s)	111, 123, 410, 1056, 1178, 1205, 1211, 1410
SsiI	CCGC	4 cut(s)	200, 261, 563, 725
SspDI	GGCGCC	1 cut(s)	608
SspI	AATATT	1 cut(s)	276
SspMI	CTAG	2 cut(s)	21, 585
SstI	GAGCTC	1 cut(s)	231
StyD4I	CCNGG	2 cut(s)	46, 359
StyI	CCWWGG	2 cut(s)	651, 984
TaaI	ACNGT	2 cut(s)	73, 1103
TaiI	ACGT	8 cut(s)	303, 432, 443, 510, 674, 934, 978, 1157
TaqI	TCGA	6 cut(s)	75, 100, 352, 396, 1011, 1079
TasI	AATT	8 cut(s)	111, 123, 410, 1056, 1178, 1205, 1211, 1410
Tru1I	TTAA	2 cut(s)	1364, 1417
Tru9I	TTAA	2 cut(s)	1364, 1417
TscAI	CASTG	2 cut(s)	12, 1106
TseFI	GTSAC	4 cut(s)	118, 313, 687, 1374
TseI	GCWGC	2 cut(s)	449, 565
Tsp45I	GTSAC	4 cut(s)	118, 313, 687, 1374
TspDTI	ATGAA	6 cut(s)	25, 30, 149, 202, 423, 1247
TspRI	CASTG	2 cut(s)	12, 1106
Tth111I	GACNNNGTC	1 cut(s)	311
Van91I	CCANNNNNTGG	2 cut(s)	53, 1044
VneI	GTGCAC	1 cut(s)	1266
VpaK11BI	GGWCC	2 cut(s)	254, 924
XapI	RAATTY	2 cut(s)	111, 410
XceI	RCATGY	2 cut(s)	379, 695
XcmI	CCANNNNNNNNNTGG	3 cut(s)	397, 658, 1079
XmnI	GAANNNNTTC	1 cut(s)	1005
XspI	CTAG	2 cut(s)	21, 585
Zsp2I	ATGCAT	1 cut(s)	619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.