Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

67707685 .. 67711261

Gene Structure 3577 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000020694

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGGGTGCTTTACTTCTAAAGGGAAACGGCAATTTCAAGGATACGAGGATCCTGCCTCCCTCGCTTTACAAACAGCATTTATTGTTAGTGAAGTTGAAGCACTCTTTGAGCTATACAAGAGTATCAGCAGCTCTGTGATTGATGATGGGTTGATAAACAAGGAAAAGTTCTACTTAGCCATTTTCAAGAATAGAAAGAAAGAAAATTTGTTTGCAAATGGGATATTTGATCTATTTGATGTGAAGAGGAAGGGTGTCATTGATTTCAATGACTTTGTTATTAGATCACTGACTGTCTTCCATCCCAATGCCCCACAAGAAGACAAGATCGATTTTCCATTTAAGCTCTATGACTTGGATAACACGGGCTTTATTGTGCGCCAAGAGGTCAGGCAAATGTTAATTGCACTTCTTTGTGAATCTGAAATGAAACTGGCAGATGACACCATCGAGTTAATTCTTGATAAGACTTTCATGAAAGCTGATGTGAACCAAGATGGGAAAATAGACTTTTCTGAGTGGAAAAATTTTGTTTCAAAGTATCCATCATTGTTAAAGATCATGACCCTCCCCTACCTTAGGGATATTACCACCACATTTCCAAGTTTTGAATTCAGAGAGCTAGTGTTTATCCCATCCCCAGGCATTGGCCACCTCGTGGCGACGGTGGAGCTTGCAAAGCTCCTCCTGTCTCGAGATGATCGACTCTTCATCACCGTCCTCATCATAAAGTTCCCGTTCAGCTCAGACGGCACTGATGCCTACGTTGAGTCCTTCGCGGACTCTTCCATATCAAATCGGATCAAGTTCATCAACCTCCCACAGCAGAATATGGAGACACAAGGTAATAGCGCCATCAACCTTTTGAACTTCATTGACAATCATCAAACCAGCGTTAAAGATGTTGTCGCCAAACTCATCGAGTCCGAGACCGAGACTCGACTCACCGGGTTTGTCATCGACATGTTTTGTACCTCTATGATCGACGTAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACGTCCAGCGCCTCCATGCTAGGGGTCATGTTACACCTTCAAGCACTTCGTGATGATCACAACAAGGACTGCATCGAGTTCAAGGACTCGACTGCTGATTTGGTGGTCCCGAGTTACTCCAACCCCTTGCCAGCTGCTAGAGTCCTACCTAGTGTCTTTTTGGAAAAGGAGACCAGCGACAGGTTCCTCAACTTGGGCAAAAGGTGTAGAGATGTCAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCATGCCCTTCTTTCTCTCAGTTCTGATGGTAAGATCCCTCCGGTGTATCCGGTGGGACCCATACTCAAGGTGAAGAGCGATGACAACAATGACCAAGTTGATTCGAAGCAGTCGAAGCAGAAGTCTGATATCTTGAAATGGCTCGATGATCAGCCTCCGTCGTCTGTAGTATTTCTGTGCTTCGGGAGTATGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCCGCGCATTGGAGCATGGAGGGTTTCGGTTCTTGTGGTCCCTACGTCAGCCTCCACCAAAGGGAACGATTGGAATGCCCAGCGACTATGCCGATCACACAGGGGTGTTACCTGAAGGGTTTCTTGATCGAACGGCTGGGGTCGGAAAAGTTATAGGGTGGGCGCCGCAAGTTGCCATCCTAGCCCACCCAGCAGTCGGAGGTTTCGTCTCCCACTGTGGGTGGAATTCCACTCTGGAGAGCTTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCTTTGTATGCCGAGCAACAACAAAATGCATTCCAGCTAGTTACGGAACTAGGGATAGCAGTGGAAATTGATATGAGTTATAGGAAGGATGGTCCAGTTGTTGTGACTGCAGAGAAAATTGAGGGTGGAATAAAGGAACTGATGGAGACTGATGGTGATATAAGGAAGAGGGTGAAACAAATGAGTGATAATAGCAAGAAAGCTTTGATGGATGGGGGGTCCTCATATGCCGCGTTGGGACACTTCGTTGATCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

680

Amino Acids

75.89

Weight (kDa)

5.1

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
EF-hand_7	PF13499	112 - 177	5.7e-08	EF-hand domain pair
EF-hand_1	PF00036	154 - 180	1.8e-06	EF hand domain
EF-hand_5	PF13202	154 - 178	2.2e-07	EF hand
UDPGT	PF00201	480 - 618	7.7e-23	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1669
AccB7I	CCANNNNNTGG	2 cut(s)	647, 658
AccII	CGCG	3 cut(s)	779, 1512, 2012
AciI	CCGC	4 cut(s)	779, 1510, 1673, 2010
AclWI	GGATC	4 cut(s)	44, 57, 809, 1309
AcoI	YGGCCR	1 cut(s)	649
AcsI	RAATTY	5 cut(s)	205, 526, 611, 1732, 2034
AcuI	CTGAAG	2 cut(s)	1465, 1641
AcvI	CACGTG	1 cut(s)	1776
AcyI	GRCGYC	1 cut(s)	1670
AdeI	CACNNNGTG	2 cut(s)	658, 1076
AfaI	GTAC	1 cut(s)	973
AflIII	ACRYGT	2 cut(s)	963, 1017
AjiI	CACGTC	1 cut(s)	1029
AjnI	CCWGG	2 cut(s)	640, 1491
AleI	CACNNNNGTG	1 cut(s)	1610
Alw26I	GTCTC	7 cut(s)	696, 830, 923, 929, 1190, 1720, 1919
AlwI	GGATC	4 cut(s)	44, 57, 809, 1309
Ama87I	CYCGRG	2 cut(s)	693, 1135
AoxI	GGCC	2 cut(s)	649, 1778
ApeKI	GCWGC	2 cut(s)	129, 1160
ApoI	RAATTY	5 cut(s)	205, 526, 611, 1732, 2034
ArsI	GACNNNNNNTTYG	4 cut(s)	1108, 1140, 1388, 1420
Asp700I	GAANNNNTTC	1 cut(s)	1626
AspLEI	GCGC	5 cut(s)	381, 854, 1037, 1514, 1672
AspS9I	GGNCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
AsuC2I	CCSGG	1 cut(s)	949
AsuHPI	GGTGA	6 cut(s)	706, 937, 1363, 1507, 1946, 1963
AsuII	TTCGAA	1 cut(s)	1385
AvaI	CYCGRG	2 cut(s)	693, 1135
AvaII	GGWCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
AxyI	CCTNAGG	1 cut(s)	578
BaeI	ACNNNNGTAYC	2 cut(s)	106, 139
BalI	TGGCCA	1 cut(s)	651
BamHI	GGATCC	1 cut(s)	49
BanI	GGYRCC	1 cut(s)	1669
BauI	CACGAG	1 cut(s)	656
BbrPI	CACGTG	1 cut(s)	1776
BbsI	GAAGAC	3 cut(s)	289, 327, 1494
BbvI	GCAGC	2 cut(s)	141, 1147
BceAI	ACGGC	3 cut(s)	44, 766, 1656
BcgI	CGANNNNNNTGC	4 cut(s)	35, 69, 1564, 1598
BciT130I	CCWGG	2 cut(s)	642, 1493
BciVI	GTATCC	3 cut(s)	35, 552, 1338
BclI	TGATCA	3 cut(s)	1081, 1429, 2029
BcnI	CCSGG	1 cut(s)	949
BcoDI	GTCTC	7 cut(s)	696, 830, 923, 929, 1190, 1720, 1919
BfaI	CTAG	7 cut(s)	623, 1046, 1164, 1176, 1688, 1817, 1829
BfmI	CTRYAG	2 cut(s)	1446, 1887
BfoI	RGCGCY	3 cut(s)	855, 1038, 1673
BfuI	GTATCC	3 cut(s)	35, 552, 1338
BisI	GCNGC	4 cut(s)	130, 1161, 1673, 2010
BlsI	GCNGC	4 cut(s)	131, 1162, 1674, 2011
Bme1390I	CCNGG	3 cut(s)	642, 949, 1493
Bme18I	GGWCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
BmeT110I	CYCGRG	2 cut(s)	693, 1135
BmgBI	CACGTC	1 cut(s)	1029
BmgT120I	GGNCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
BmiI	GGNNCC	9 cut(s)	51, 1008, 1134, 1211, 1338, 1339, 1547, 1671, 1999
BmrFI	CCNGG	3 cut(s)	642, 949, 1493
BmsI	GCATC	2 cut(s)	748, 1107
BpiI	GAAGAC	3 cut(s)	289, 327, 1494
BpmI	CTGGAG	2 cut(s)	1295, 1763
Bpu14I	TTCGAA	1 cut(s)	1385
BpuEI	CTTGAG	1 cut(s)	1331
BpuMI	CCSGG	1 cut(s)	949
Bsa29I	ATCGAT	1 cut(s)	330
BsaAI	YACGTR	1 cut(s)	1776
BsaHI	GRCGYC	1 cut(s)	1670
BsaI	GGTCTC	2 cut(s)	923, 1190
BsaJI	CCNNGG	1 cut(s)	640
BsaWI	WCCGGW	2 cut(s)	1321, 1330
BsaXI	ACNNNNNCTCC	6 cut(s)	1698, 1728, 1736, 1752, 1766, 1782
Bse118I	RCCGGY	1 cut(s)	1765
Bse1I	ACTGG	2 cut(s)	438, 1874
Bse21I	CCTNAGG	1 cut(s)	578
BseBI	CCWGG	2 cut(s)	642, 1493
BseCI	ATCGAT	1 cut(s)	330
BseDI	CCNNGG	1 cut(s)	640
BseGI	GGATG	5 cut(s)	301, 635, 1683, 1873, 1996
BseMII	CTCAG	3 cut(s)	507, 759, 1312
BseNI	ACTGG	2 cut(s)	438, 1874
BseRI	GAGGAG	1 cut(s)	674
BseXI	GCAGC	2 cut(s)	141, 1147
BseYI	CCCAGC	3 cut(s)	1586, 1643, 1696
Bsh1236I	CGCG	3 cut(s)	779, 1512, 2012
BshFI	GGCC	2 cut(s)	651, 1780
BshNI	GGYRCC	1 cut(s)	1669
BshVI	ATCGAT	1 cut(s)	330
BsiHKCI	CYCGRG	2 cut(s)	693, 1135
BsiSI	CCGG	4 cut(s)	948, 1322, 1331, 1766
BslFI	GGGAC	4 cut(s)	1118, 1350, 1531, 2031
BsmAI	GTCTC	7 cut(s)	696, 830, 923, 929, 1190, 1720, 1919
BsmBI	CGTCTC	1 cut(s)	1720
BsmFI	GGGAC	4 cut(s)	1118, 1350, 1531, 2031
BsmI	GAATGC	2 cut(s)	1587, 1808
BsnI	GGCC	2 cut(s)	651, 1780
Bso31I	GGTCTC	2 cut(s)	923, 1190
BsoBI	CYCGRG	2 cut(s)	693, 1135
Bsp119I	TTCGAA	1 cut(s)	1385
BspACI	CCGC	4 cut(s)	779, 1510, 1673, 2010
BspANI	GGCC	2 cut(s)	651, 1780
BspCNI	CTCAG	3 cut(s)	508, 758, 1311
BspDI	ATCGAT	1 cut(s)	330
BspFNI	CGCG	3 cut(s)	779, 1512, 2012
BspHI	TCATGA	2 cut(s)	474, 561
BspLI	GGNNCC	9 cut(s)	51, 1008, 1134, 1211, 1338, 1339, 1547, 1671, 1999
BspMAI	CTGCAG	1 cut(s)	1891
BspPI	GGATC	4 cut(s)	44, 57, 809, 1309
BspQI	GCTCTTC	1 cut(s)	1349
BspT104I	TTCGAA	1 cut(s)	1385
BspT107I	GGYRCC	1 cut(s)	1669
BspTNI	GGTCTC	2 cut(s)	923, 1190
BsrFI	RCCGGY	1 cut(s)	1765
BsrI	ACTGG	2 cut(s)	438, 1874
BssAI	RCCGGY	1 cut(s)	1765
BssECI	CCNNGG	1 cut(s)	640
BssNI	GRCGYC	1 cut(s)	1670
BssSI	CACGAG	1 cut(s)	656
Bst2BI	CACGAG	1 cut(s)	656
Bst2UI	CCWGG	2 cut(s)	642, 1493
Bst4CI	ACNGT	4 cut(s)	295, 667, 718, 1724
Bst6I	CTCTTC	5 cut(s)	239, 713, 790, 1349, 1940
BstACI	GRCGYC	1 cut(s)	1670
BstBAI	YACGTR	1 cut(s)	1776
BstBI	TTCGAA	1 cut(s)	1385
BstC8I	GCNNGC	4 cut(s)	675, 1158, 1284, 1510
BstDEI	CTNAG	5 cut(s)	175, 516, 578, 745, 1298
BstENI	CCTNNNNNAGG	1 cut(s)	577
BstF5I	GGATG	5 cut(s)	301, 635, 1683, 1873, 1996
BstFNI	CGCG	3 cut(s)	779, 1512, 2012
BstH2I	RGCGCY	3 cut(s)	855, 1038, 1673
BstHHI	GCGC	5 cut(s)	381, 854, 1037, 1514, 1672
BstMAI	GTCTC	7 cut(s)	696, 830, 923, 929, 1190, 1720, 1919
BstMWI	GCNNNNNNNGC	7 cut(s)	62, 679, 750, 1279, 1396, 1688, 1697
BstNI	CCWGG	2 cut(s)	642, 1493
BstNSI	RCATGY	3 cut(s)	967, 1021, 1286
BstSCI	CCNGG	3 cut(s)	640, 947, 1491
BstSFI	CTRYAG	2 cut(s)	1446, 1887
BstUI	CGCG	3 cut(s)	779, 1512, 2012
BstV1I	GCAGC	2 cut(s)	141, 1147
BstV2I	GAAGAC	3 cut(s)	289, 327, 1494
BstX2I	RGATCY	2 cut(s)	49, 1314
BstYI	RGATCY	2 cut(s)	49, 1314
Bsu15I	ATCGAT	1 cut(s)	330
Bsu36I	CCTNAGG	1 cut(s)	578
BsuI	GTATCC	3 cut(s)	35, 552, 1338
BsuRI	GGCC	2 cut(s)	651, 1780
BsuTUI	ATCGAT	1 cut(s)	330
BtgZI	GCGATG	1 cut(s)	1374
BtrI	CACGTC	1 cut(s)	1029
BtsCI	GGATG	5 cut(s)	301, 635, 1683, 1873, 1996
BtsI	GCAGTG	1 cut(s)	1845
BtsIMutI	CAGTG	5 cut(s)	287, 753, 1489, 1720, 1845
Cac8I	GCNNGC	4 cut(s)	675, 1158, 1284, 1510
CciI	TCATGA	2 cut(s)	474, 561
CfoI	GCGC	5 cut(s)	381, 854, 1037, 1514, 1672
Cfr10I	RCCGGY	1 cut(s)	1765
Cfr13I	GGNCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
ClaI	ATCGAT	1 cut(s)	330
CsiI	ACCWGGT	1 cut(s)	1491
Csp6I	GTAC	1 cut(s)	972
CviAII	CATG	8 cut(s)	475, 562, 964, 1018, 1042, 1054, 1283, 1523
CviQI	GTAC	1 cut(s)	972
DdeI	CTNAG	5 cut(s)	175, 516, 578, 745, 1298
DinI	GGCGCC	1 cut(s)	1671
DraIII	CACNNNGTG	2 cut(s)	658, 1076
EaeI	YGGCCR	1 cut(s)	649
Eam1104I	CTCTTC	5 cut(s)	239, 713, 790, 1349, 1940
EarI	CTCTTC	5 cut(s)	239, 713, 790, 1349, 1940
Eco31I	GGTCTC	2 cut(s)	923, 1190
Eco32I	GATATC	1 cut(s)	1411
Eco47I	GGWCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
Eco57I	CTGAAG	2 cut(s)	1465, 1641
Eco72I	CACGTG	1 cut(s)	1776
Eco81I	CCTNAGG	1 cut(s)	578
Eco88I	CYCGRG	2 cut(s)	693, 1135
EcoNI	CCTNNNNNAGG	1 cut(s)	577
EcoO109I	RGGNCCY	2 cut(s)	1337, 1998
EcoRI	GAATTC	2 cut(s)	611, 1732
EcoRII	CCWGG	2 cut(s)	640, 1491
EcoRV	GATATC	1 cut(s)	1411
EcoT22I	ATGCAT	1 cut(s)	1810
EgeI	GGCGCC	1 cut(s)	1671
EheI	GGCGCC	1 cut(s)	1671
Esp3I	CGTCTC	1 cut(s)	1720
FaeI	CATG	8 cut(s)	478, 565, 967, 1021, 1045, 1057, 1286, 1526
FalI	AAGNNNNNCTT	4 cut(s)	158, 190, 1614, 1646
FaqI	GGGAC	4 cut(s)	1118, 1350, 1531, 2031
FatI	CATG	8 cut(s)	474, 561, 963, 1017, 1041, 1053, 1282, 1522
FauI	CCCGC	1 cut(s)	1517
FauNDI	CATATG	1 cut(s)	2005
FbaI	TGATCA	3 cut(s)	1081, 1429, 2029
Fnu4HI	GCNGC	4 cut(s)	130, 1161, 1673, 2010
FokI	GGATG	5 cut(s)	288, 622, 1670, 1880, 2003
Fsp4HI	GCNGC	4 cut(s)	130, 1161, 1673, 2010
FspBI	CTAG	7 cut(s)	623, 1046, 1164, 1176, 1688, 1817, 1829
GlaI	GCGC	5 cut(s)	380, 853, 1036, 1513, 1671
GluI	GCNGC	4 cut(s)	130, 1161, 1673, 2010
GsaI	CCCAGC	3 cut(s)	1590, 1647, 1700
GsuI	CTGGAG	2 cut(s)	1295, 1763
HaeII	RGCGCY	3 cut(s)	855, 1038, 1673
HaeIII	GGCC	2 cut(s)	651, 1780
HapII	CCGG	4 cut(s)	948, 1322, 1331, 1766
HhaI	GCGC	5 cut(s)	381, 854, 1037, 1514, 1672
Hin1I	GRCGYC	1 cut(s)	1670
Hin1II	CATG	8 cut(s)	478, 565, 967, 1021, 1045, 1057, 1286, 1526
Hin6I	GCGC	5 cut(s)	379, 852, 1035, 1512, 1670
HinP1I	GCGC	5 cut(s)	379, 852, 1035, 1512, 1670
HindIII	AAGCTT	2 cut(s)	1477, 1980
HpaII	CCGG	4 cut(s)	948, 1322, 1331, 1766
HphI	GGTGA	6 cut(s)	706, 937, 1363, 1507, 1946, 1963
Hpy166II	GTNNAC	1 cut(s)	490
Hpy8I	GTNNAC	1 cut(s)	490
Hpy99I	CGWCG	3 cut(s)	667, 989, 1444
HpyAV	CCTTC	6 cut(s)	244, 784, 1073, 1298, 1616, 1858
HpyCH4III	ACNGT	4 cut(s)	295, 667, 718, 1724
HpyCH4IV	ACGT	5 cut(s)	765, 987, 1028, 1552, 1775
HpyCH4V	TGCA	6 cut(s)	215, 407, 677, 1098, 1808, 1889
HpyF10VI	GCNNNNNNNGC	7 cut(s)	62, 679, 750, 1279, 1396, 1688, 1697
HpyF3I	CTNAG	5 cut(s)	175, 516, 578, 745, 1298
HpySE526I	ACGT	5 cut(s)	765, 987, 1028, 1552, 1775
Hsp92I	GRCGYC	1 cut(s)	1670
Hsp92II	CATG	8 cut(s)	478, 565, 967, 1021, 1045, 1057, 1286, 1526
HspAI	GCGC	5 cut(s)	379, 852, 1035, 1512, 1670
KasI	GGCGCC	1 cut(s)	1669
KflI	GGGWCCC	1 cut(s)	1337
Ksp22I	TGATCA	3 cut(s)	1081, 1429, 2029
LguI	GCTCTTC	1 cut(s)	1349
LmnI	GCTCC	3 cut(s)	670, 687, 1519
Lsp1109I	GCAGC	2 cut(s)	141, 1147
LweI	GCATC	2 cut(s)	748, 1107
MabI	ACCWGGT	1 cut(s)	1491
MaeI	CTAG	7 cut(s)	623, 1046, 1164, 1176, 1688, 1817, 1829
MaeII	ACGT	5 cut(s)	765, 987, 1028, 1552, 1775
MaeIII	GTNAC	5 cut(s)	1056, 1139, 1614, 1819, 1882
MboII	GAAGA	8 cut(s)	256, 289, 332, 700, 777, 1366, 1499, 1957
MflI	RGATCY	2 cut(s)	49, 1314
MlsI	TGGCCA	1 cut(s)	651
MluNI	TGGCCA	1 cut(s)	651
Mly113I	GGCGCC	1 cut(s)	1670
MlyI	GAGTC	9 cut(s)	699, 776, 779, 931, 932, 936, 1106, 1176, 1286
MmeI	TCCRAC	3 cut(s)	1170, 1630, 1684
Mox20I	TGGCCA	1 cut(s)	651
Mph1103I	ATGCAT	1 cut(s)	1810
MroXI	GAANNNNTTC	1 cut(s)	1626
MscI	TGGCCA	1 cut(s)	651
MseI	TTAA	6 cut(s)	342, 401, 455, 554, 897, 2038
MslI	CAYNNNNRTG	3 cut(s)	306, 962, 1610
Msp20I	TGGCCA	1 cut(s)	651
MspA1I	CMGCKG	1 cut(s)	1160
MspI	CCGG	4 cut(s)	948, 1322, 1331, 1766
MspR9I	CCNGG	3 cut(s)	642, 949, 1493
Mva1269I	GAATGC	2 cut(s)	1587, 1808
MvaI	CCWGG	2 cut(s)	642, 1493
MvnI	CGCG	3 cut(s)	779, 1512, 2012
MwoI	GCNNNNNNNGC	7 cut(s)	62, 679, 750, 1279, 1396, 1688, 1697
NarI	GGCGCC	1 cut(s)	1670
NciI	CCSGG	1 cut(s)	949
NdeI	CATATG	1 cut(s)	2005
NlaIII	CATG	8 cut(s)	478, 565, 967, 1021, 1045, 1057, 1286, 1526
NlaIV	GGNNCC	9 cut(s)	51, 1008, 1134, 1211, 1338, 1339, 1547, 1671, 1999
NmeAIII	GCCGAG	1 cut(s)	1816
NmuCI	GTSAC	1 cut(s)	1882
NsiI	ATGCAT	1 cut(s)	1810
NspI	RCATGY	3 cut(s)	967, 1021, 1286
NspV	TTCGAA	1 cut(s)	1385
OliI	CACNNNNGTG	1 cut(s)	1610
PaeI	GCATGC	1 cut(s)	1286
PaeR7I	CTCGAG	1 cut(s)	693
PagI	TCATGA	2 cut(s)	474, 561
PciI	ACATGT	2 cut(s)	963, 1017
PciSI	GCTCTTC	1 cut(s)	1349
PcsI	WCGNNNNNNNCGW	4 cut(s)	700, 993, 1391, 1710
PctI	GAATGC	2 cut(s)	1587, 1808
PdmI	GAANNNNTTC	1 cut(s)	1626
PfeI	GAWTC	2 cut(s)	419, 1382
PflMI	CCANNNNNTGG	2 cut(s)	647, 658
PkrI	GCNGC	4 cut(s)	131, 1162, 1674, 2011
PleI	GAGTC	9 cut(s)	699, 776, 778, 931, 931, 936, 1106, 1175, 1285
PluTI	GGCGCC	1 cut(s)	1673
PmaCI	CACGTG	1 cut(s)	1776
PmlI	CACGTG	1 cut(s)	1776
PpsI	GAGTC	9 cut(s)	699, 776, 778, 931, 931, 936, 1106, 1175, 1285
Ppu21I	YACGTR	1 cut(s)	1776
PpuMI	RGGWCCY	2 cut(s)	1337, 1998
PscI	ACATGT	2 cut(s)	963, 1017
Psp5II	RGGWCCY	2 cut(s)	1337, 1998
Psp6I	CCWGG	2 cut(s)	640, 1491
PspCI	CACGTG	1 cut(s)	1776
PspFI	CCCAGC	3 cut(s)	1586, 1643, 1696
PspGI	CCWGG	2 cut(s)	640, 1491
PspN4I	GGNNCC	9 cut(s)	51, 1008, 1134, 1211, 1338, 1339, 1547, 1671, 1999
PspPI	GGNCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
PspPPI	RGGWCCY	2 cut(s)	1337, 1998
PstI	CTGCAG	1 cut(s)	1891
PsuI	RGATCY	2 cut(s)	49, 1314
PvuII	CAGCTG	1 cut(s)	1160
RsaI	GTAC	1 cut(s)	973
RsaNI	GTAC	1 cut(s)	972
RseI	CAYNNNNRTG	3 cut(s)	306, 962, 1610
SapI	GCTCTTC	1 cut(s)	1349
SaqAI	TTAA	6 cut(s)	342, 401, 455, 554, 897, 2038
SatI	GCNGC	4 cut(s)	130, 1161, 1673, 2010
Sau96I	GGNCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
SchI	GAGTC	9 cut(s)	699, 776, 779, 931, 932, 936, 1106, 1176, 1286
ScrFI	CCNGG	3 cut(s)	642, 949, 1493
SexAI	ACCWGGT	1 cut(s)	1491
SfaNI	GCATC	2 cut(s)	748, 1107
SfcI	CTRYAG	2 cut(s)	1446, 1887
SfoI	GGCGCC	1 cut(s)	1671
Sfr274I	CTCGAG	1 cut(s)	693
SfuI	TTCGAA	1 cut(s)	1385
SinI	GGWCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
SlaI	CTCGAG	1 cut(s)	693
SmiMI	CAYNNNNRTG	3 cut(s)	306, 962, 1610
SmlI	CTYRAG	2 cut(s)	693, 1346
SmoI	CTYRAG	2 cut(s)	693, 1346
SphI	GCATGC	1 cut(s)	1286
SsiI	CCGC	4 cut(s)	779, 1510, 1673, 2010
SspDI	GGCGCC	1 cut(s)	1669
SspMI	CTAG	7 cut(s)	623, 1046, 1164, 1176, 1688, 1817, 1829
StyD4I	CCNGG	3 cut(s)	640, 947, 1491
TaaI	ACNGT	4 cut(s)	295, 667, 718, 1724
TaiI	ACGT	5 cut(s)	768, 990, 1031, 1555, 1778
TaqII	GACCGA	1 cut(s)	947
TauI	GCSGC	2 cut(s)	1675, 2012
TfiI	GAWTC	2 cut(s)	419, 1382
Tru1I	TTAA	6 cut(s)	342, 401, 455, 554, 897, 2038
Tru9I	TTAA	6 cut(s)	342, 401, 455, 554, 897, 2038
TscAI	CASTG	5 cut(s)	294, 760, 1489, 1727, 1845
TseFI	GTSAC	1 cut(s)	1882
TseI	GCWGC	2 cut(s)	129, 1160
Tsp45I	GTSAC	1 cut(s)	1882
TspDTI	ATGAA	6 cut(s)	443, 463, 491, 700, 799, 862
TspGWI	ACGGA	2 cut(s)	1428, 1838
TspRI	CASTG	5 cut(s)	294, 760, 1489, 1727, 1845
Van91I	CCANNNNNTGG	2 cut(s)	647, 658
VpaK11BI	GGWCC	5 cut(s)	1132, 1337, 1545, 1871, 1998
XagI	CCTNNNNNAGG	1 cut(s)	577
XapI	RAATTY	5 cut(s)	205, 526, 611, 1732, 2034
XceI	RCATGY	3 cut(s)	967, 1021, 1286
XhoI	CTCGAG	1 cut(s)	693
XmnI	GAANNNNTTC	1 cut(s)	1626
XspI	CTAG	7 cut(s)	623, 1046, 1164, 1176, 1688, 1817, 1829
Zsp2I	ATGCAT	1 cut(s)	1810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.