Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000209

Physical Location & Seq

Genomic Coordinates Forward (+)

67029361 .. 67030818

Gene Structure 1458 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G041140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGAGAAACCTGCAGAGCTCGTGTTCATCCCATCCCCTGGTATAGGCCACCTGGTTTCAACACTTGAGATCGCAAAGTTCCTCCTGTCTCGAGACGACCAACTCTTGATCACTGTCCTCATCATGAAGTTTCCCGCTGTTTCCAAAGGCACTGATGCTTATGTCGAGTCATTTGCAGACTCTTCTTCTCCCATATCACAGCGTATCAAGTTCATCAACCTCCCACAAGTCAATACTGACCATACGGAAGGCAGTGTCCGCAATAGCTTGATCGGTTTAGTTGAAAGTCAGCAACCCCATGTCAAAGATGCCATCACAAAACTCAGCGAGTCCCAGACTCGACTTGCGGGGTTTGTCGTCGACATGTTCTGTACGGCTATGATCGACGTGGCCGACCAATTTGGTGTTCCTAGCTACGTGTTCTTCACCTCCAGCGCCGCCGCGCTCGGGCTAATGTTCCACTTCCAAGCGCTGCGCGATCAAGAAGGCAAGGACTGCACCGAGTTCAAAGACTCCGACGCTGAGTTGCTCATCCCGAGTTTTGTCAATCCCTTGCCAGCTGCTAAAGTCCTACCTGGCAGGCTATTCGTAAAGGAGGGAGCAGAATCATTTCTCAACATTATCAAAAGGTTTAGAGACACCAAGGGTATTTTGGTGAACACGTTCGCAGACCTAGAATCGCATGCCCTTCATGCTCTTTCATCTGATGCCGCGATCCCTCCCGTATATCCGGTAGGACCCTTACTTAACTTGAACACCAATGAAAGTCGTGTGGATTCGGACGAGGCCAAGCAGAAGTCTGATATCTTGAAATGGCTTGATGATCAGCCTCCATTGTCTGTAGTGTTCTTGTGCTTTGGAAGCATGGGAAGCTTTGGCGAGGACCAGGTGAAAGAGATCGCCCATGCCCTGGAGCAGGCGGGCCATCGGTTCTTGTGGTCCTTACGTCGGCCCCCACCCACAGGAAAAATTGCTTTTCCAAGTGACTACGATGACCACACCGGAGTCTTGCCCAAAGGGTTCCTCGATCGAACATTTGGGATTGGAAAGGTCATAGGCTGGGCCCCGCAAGTTGCCGTCTTGGCTCACCCATCTGTGGGAGGATTTGTATCCCATTGTGGGTGGAATTCCACGCTTGAGAGTCTTTGGCACGGTGTGCCGGTTGCCACGTGGCCATTGTACGCGGAGCAACAACTTAACGCGTTTCAGCTGGTGAAGGAATTGGAATTGGCGGTGGAAATTGATATGAGCTACAGGAGCGATAGTCCAGTTCTTGTGAGCGCGAAGGAGATAGAGAGAGGAATAAGAGAGGTGATGAAACGTGACCATGATATAAGAAAGAGAGTGAAAGAAATGAGTGAGAAGGGCAAGAAAGCTTTTATGGATGGTGGGTCGTCATACTCTTCTGTGGGACATTTTATTGATCAGATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006066 GO:0006082 GO:0006629 GO:0006714 GO:0006720 GO:0006721 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008194 GO:0008300 GO:0009056 GO:0009628 GO:0009651 GO:0009687 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016020 GO:0016042 GO:0016054 GO:0016107 GO:0016115 GO:0016740 GO:0016757 GO:0016758 GO:0019752 GO:0032787 GO:0033993 GO:0035251 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043288 GO:0043290 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046164 GO:0046345 GO:0046395 GO:0046527 GO:0050896 GO:0071704 GO:0072329 GO:0080043 GO:0080044 GO:0080046 GO:0097305 GO:1901575 GO:1901615 GO:1901616 GO:1901700 GO:1902644

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

477

Amino Acids

52.6

Weight (kDa)

5.57

Isoelectric Point (pI)

44.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	280 - 424	4.7e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000209)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G21760 AT3G21780 AT3G21790 AT3G21800 AT4G15260 AT4G15270 AT4G15270 AT4G15270 AT4G15280 AT4G15280
fragaria_vesca	FvH4_3g10810 FvH4_6g39330 FvH4_6g39350 FvH4_6g39380 FvH4_6g39401 FvH4_6g39410 FvH4_6g39430
malus_domestica	MD09G1140700.v1.1 MD09G1141100.v1.1 MD09G1141200.v1.1 MD09G1141300.v1.1 MD09G1141500.v1.1 MD09G1141600.v1.1 MD09G1141700.v1.1 MD09G1141800.v1.1 MD17G1129500.v1.1 MD17G1129700.v1.1
prunus_persica	Prupe.3G184600_v2.0.a1 Prupe.3G184700_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184800_v2.0.a1 Prupe.3G184900_v2.0.a1 Prupe.3G185000_v2.0.a1 Prupe.3G185100_v2.0.a1 Prupe.3G185200_v2.0.a1 Prupe.7G013100_v2.0.a1
pyrus_communis	pycom09g06130 pycom09g06140 pycom09g06170 pycom09g06180 pycom09g06200 pycom17g12200 pycom17g12230
rosa_chinensis	RchiOBHm_Chr1g0339921 RchiOBHm_Chr1g0339941 RchiOBHm_Chr1g0339951 RchiOBHm_Chr1g0339981 RchiOBHm_Chr1g0340051 RchiOBHm_Chr1g0340061 RchiOBHm_Chr2g0153251 RchiOBHm_Chr2g0153261 RchiOBHm_Chr2g0153271 RchiOBHm_Chr2g0153291 RchiOBHm_Chr2g0153321 RchiOBHm_Chr2g0153381 RchiOBHm_Chr2g0153451 RchiOBHm_Chr2g0153461 RchiOBHm_Chr2g0153471
rosa_laevigata	RLG00000013864 RLG00000020668 RLG00000020669 RLG00000020688 RLG00000020689 RLG00000020691 RLG00000020692 RLG00000020694 RLG00000020695 RLG00000020696 RLG00000020697 RLG00000020698 RLG00000029250 RLG00000029251 RLG00000029254 RLG00000029256 RLG00000029257
rosa_multiflora	Rmu_co8175810.1_g000001 Rmu_co8338271.1_g000001 Rmu_co8340327.1_g000001 Rmu_sc0000160.1_g000002 Rmu_sc0000160.1_g000005 Rmu_sc0000160.1_g000017 Rmu_sc0000234.1_g000001 Rmu_sc0000234.1_g000002 Rmu_sc0000234.1_g000010 Rmu_sc0000442.1_g000011 Rmu_sc0000442.1_g000013 Rmu_sc0000442.1_g000014 Rmu_sc0003810.1_g000001 Rmu_sc0003810.1_g000004 Rmu_sc0004856.1_g000012 Rmu_sc0004856.1_g000013 Rmu_sc0004856.1_g000014 Rmu_sc0004856.1_g000016 Rmu_sc0007649.1_g000007 Rmu_sc0007649.1_g000008 Rmu_sc0007649.1_g000011 Rmu_sc0018149.1_g000001 Rmu_sc0034645.1_g000001 Rmu_sc0034646.1_g000001
rosa_roxburghii	Rroxscaffold_1G00057370 Rroxscaffold_2G00095010 Rroxscaffold_2G00095020 Rroxscaffold_2G00095030 Rroxscaffold_2G00095050 Rroxscaffold_2G00095070 Rroxscaffold_4G00313800 Rroxscaffold_4G00313810 Rroxscaffold_4G00313820 Rroxscaffold_4G00313840 Rroxscaffold_4G00313900 Rroxscaffold_4G00313910
rosa_rugosa	Rorug01G0137300.1 Rorug01G0137500.1 Rorug01G0137700.1 Rorug01G0137800.1 Rorug01G0138000.1 Rorug01G0138300.1 Rorug02G0437700.1 Rorug02G0437800 Rorug02G0437900 Rorug02G0437900 Rorug02G0437900 Rorug02G0438000 Rorug02G0438000 Rorug02G0438100 Rorug02G0438200
rosa_samantha	Rh2AG500800 Rh2AG501000 Rh2AG501100 Rh2AG501200 Rh2AG501300 Rh2AG502000 Rh2AG502100 Rh2AG502200 Rh2BG512300 Rh2BG512500 Rh2CG487200 Rh2CG487300 Rh2CG487400 Rh2CG487900 Rh2CG488000 Rh2CG488100
rosa_wichuraiana	Rw0G022390 Rw1G012850 Rw1G012860 Rw2G041100 Rw2G041120 Rw2G041130 Rw2G041140 Rw2G041150

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	19
AccB7I	CCANNNNNTGG	2 cut(s)	38, 910
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
AclWI	GGATC	1 cut(s)	709
AcoI	YGGCCR	2 cut(s)	390, 1172
AcsI	RAATTY	1 cut(s)	1126
AcvI	CACGTG	1 cut(s)	1170
AdeI	CACNNNGTG	1 cut(s)	1156
AfaI	GTAC	2 cut(s)	373, 1181
AfeI	AGCGCT	1 cut(s)	471
AflIII	ACRYGT	4 cut(s)	363, 417, 660, 1200
AgsI	TTSAA	5 cut(s)	60, 284, 508, 754, 811
AjiI	CACGTC	1 cut(s)	388
AjnI	CCWGG	5 cut(s)	37, 51, 574, 885, 909
AjuI	GAANNNNNNNTTGG	2 cut(s)	390, 422
AluBI	AGCT	8 cut(s)	19, 267, 414, 560, 873, 1210, 1251, 1376
AluI	AGCT	8 cut(s)	19, 267, 414, 560, 873, 1210, 1251, 1376
Alw21I	GWGCWC	1 cut(s)	21
Alw26I	GTCTC	3 cut(s)	87, 93, 630
AlwI	GGATC	1 cut(s)	709
Ama87I	CYCGRG	3 cut(s)	90, 446, 535
Aor51HI	AGCGCT	1 cut(s)	471
AoxI	GGCC	7 cut(s)	46, 390, 786, 922, 950, 1062, 1172
ApaI	GGGCCC	1 cut(s)	1066
ApeKI	GCWGC	2 cut(s)	472, 560
ApoI	RAATTY	1 cut(s)	1126
Asp700I	GAANNNNTTC	2 cut(s)	609, 662
AspLEI	GCGC	5 cut(s)	437, 445, 472, 477, 1283
AspS9I	GGNCC	7 cut(s)	737, 883, 922, 939, 951, 1062, 1063
AsuHPI	GGTGA	6 cut(s)	418, 667, 901, 1079, 1225, 1324
AvaI	CYCGRG	3 cut(s)	90, 446, 535
AvaII	GGWCC	3 cut(s)	737, 883, 939
BaeGI	GKGCMC	1 cut(s)	1066
BalI	TGGCCA	1 cut(s)	1174
BanII	GRGCYC	2 cut(s)	21, 1066
BauI	CACGAG	1 cut(s)	20
BbrPI	CACGTG	1 cut(s)	1170
Bbv12I	GWGCWC	1 cut(s)	21
BbvI	GCAGC	2 cut(s)	459, 547
BccI	CCATC	5 cut(s)	40, 320, 933, 1099, 1379
BceAI	ACGGC	2 cut(s)	390, 1061
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 568, 602
BciT130I	CCWGG	5 cut(s)	39, 53, 576, 887, 911
BciVI	GTATCC	1 cut(s)	1120
BclI	TGATCA	3 cut(s)	108, 823, 1423
BcoDI	GTCTC	3 cut(s)	87, 93, 630
BfaI	CTAG	2 cut(s)	411, 674
BfmI	CTRYAG	3 cut(s)	12, 840, 1252
BfoI	RGCGCY	2 cut(s)	438, 473
BfuAI	ACCTGC	1 cut(s)	19
BfuI	GTATCC	1 cut(s)	1120
BglI	GCCNNNNNGGC	1 cut(s)	1082
BisI	GCNGC	5 cut(s)	438, 441, 473, 561, 711
BlsI	GCNGC	5 cut(s)	439, 442, 474, 562, 712
Bme1390I	CCNGG	5 cut(s)	39, 53, 576, 887, 911
Bme18I	GGWCC	3 cut(s)	737, 883, 939
BmeT110I	CYCGRG	3 cut(s)	90, 446, 535
BmgBI	CACGTC	1 cut(s)	388
BmgT120I	GGNCC	7 cut(s)	737, 883, 922, 939, 951, 1062, 1063
BmiI	GGNNCC	5 cut(s)	739, 953, 1022, 1064, 1065
BmrFI	CCNGG	5 cut(s)	39, 53, 576, 887, 911
BmsI	GCATC	3 cut(s)	145, 298, 697
BpmI	CTGGAG	2 cut(s)	415, 932
BpuEI	CTTGAG	2 cut(s)	86, 1157
BsaAI	YACGTR	2 cut(s)	418, 1170
BsaBI	GATNNNNATC	1 cut(s)	1108
BsaJI	CCNNGG	3 cut(s)	37, 642, 909
BsaWI	WCCGGW	2 cut(s)	730, 1001
BsaXI	ACNNNNNCTCC	4 cut(s)	1092, 1122, 1249, 1279
Bse118I	RCCGGY	1 cut(s)	1159
Bse1I	ACTGG	1 cut(s)	1268
Bse8I	GATNNNNATC	1 cut(s)	1108
BseBI	CCWGG	5 cut(s)	39, 53, 576, 887, 911
BseDI	CCNNGG	3 cut(s)	37, 642, 909
BseGI	GGATG	4 cut(s)	27, 32, 531, 1390
BseJI	GATNNNNATC	1 cut(s)	1108
BseMII	CTCAG	2 cut(s)	337, 513
BseNI	ACTGG	1 cut(s)	1268
BseSI	GKGCMC	1 cut(s)	1066
BseXI	GCAGC	2 cut(s)	459, 547
BseYI	CCCAGC	1 cut(s)	1059
BsgI	GTGCAG	1 cut(s)	481
Bsh1236I	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
Bsh1285I	CGRYCG	1 cut(s)	1030
BshFI	GGCC	7 cut(s)	48, 392, 788, 924, 952, 1064, 1174
BsiEI	CGRYCG	1 cut(s)	1030
BsiHKAI	GWGCWC	1 cut(s)	21
BsiHKCI	CYCGRG	3 cut(s)	90, 446, 535
BsiSI	CCGG	3 cut(s)	731, 1002, 1160
BslFI	GGGAC	2 cut(s)	316, 1425
BsmAI	GTCTC	3 cut(s)	87, 93, 630
BsmBI	CGTCTC	1 cut(s)	87
BsmFI	GGGAC	2 cut(s)	316, 1425
BsnI	GGCC	7 cut(s)	48, 392, 788, 924, 952, 1064, 1174
BsoBI	CYCGRG	3 cut(s)	90, 446, 535
Bsp120I	GGGCCC	1 cut(s)	1062
Bsp1286I	GDGCHC	2 cut(s)	21, 1066
BspANI	GGCC	7 cut(s)	48, 392, 788, 924, 952, 1064, 1174
BspCNI	CTCAG	2 cut(s)	336, 514
BspFNI	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
BspHI	TCATGA	1 cut(s)	123
BspLI	GGNNCC	5 cut(s)	739, 953, 1022, 1064, 1065
BspMAI	CTGCAG	1 cut(s)	16
BspMI	ACCTGC	1 cut(s)	19
BspPI	GGATC	1 cut(s)	709
BsrFI	RCCGGY	1 cut(s)	1159
BsrI	ACTGG	1 cut(s)	1268
BssAI	RCCGGY	1 cut(s)	1159
BssECI	CCNNGG	3 cut(s)	37, 642, 909
BssSI	CACGAG	1 cut(s)	20
BssT1I	CCWWGG	1 cut(s)	642
Bst2BI	CACGAG	1 cut(s)	20
Bst2UI	CCWGG	5 cut(s)	39, 53, 576, 887, 911
Bst4CI	ACNGT	2 cut(s)	115, 1154
Bst6I	CTCTTC	2 cut(s)	187, 1408
BstAPI	GCANNNNNTGC	2 cut(s)	495, 1156
BstBAI	YACGTR	2 cut(s)	418, 1170
BstC8I	GCNNGC	5 cut(s)	558, 581, 684, 918, 922
BstDEI	CTNAG	2 cut(s)	323, 522
BstENI	CCTNNNNNAGG	2 cut(s)	42, 914
BstF5I	GGATG	4 cut(s)	27, 32, 531, 1390
BstFNI	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
BstH2I	RGCGCY	2 cut(s)	438, 473
BstHHI	GCGC	5 cut(s)	437, 445, 472, 477, 1283
BstMAI	GTCTC	3 cut(s)	87, 93, 630
BstMCI	CGRYCG	1 cut(s)	1030
BstMWI	GCNNNNNNNGC	8 cut(s)	258, 495, 692, 861, 870, 1082, 1156, 1257
BstNI	CCWGG	5 cut(s)	39, 53, 576, 887, 911
BstNSI	RCATGY	2 cut(s)	367, 686
BstSCI	CCNGG	5 cut(s)	37, 51, 574, 885, 909
BstSFI	CTRYAG	3 cut(s)	12, 840, 1252
BstSLI	GKGCMC	1 cut(s)	1066
BstUI	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
BstV1I	GCAGC	2 cut(s)	459, 547
BsuI	GTATCC	1 cut(s)	1120
BsuRI	GGCC	7 cut(s)	48, 392, 788, 924, 952, 1064, 1174
BtrI	CACGTC	1 cut(s)	388
BtsCI	GGATG	4 cut(s)	27, 32, 531, 1390
BtsI	GCAGTG	1 cut(s)	259
BtsIMutI	CAGTG	3 cut(s)	111, 150, 259
BveI	ACCTGC	1 cut(s)	19
Cac8I	GCNNGC	5 cut(s)	558, 581, 684, 918, 922
CciI	TCATGA	1 cut(s)	123
CfoI	GCGC	5 cut(s)	437, 445, 472, 477, 1283
Cfr10I	RCCGGY	1 cut(s)	1159
Cfr13I	GGNCC	7 cut(s)	737, 883, 922, 939, 951, 1062, 1063
CseI	GACGC	1 cut(s)	527
CsiI	ACCWGGT	2 cut(s)	51, 885
Csp6I	GTAC	2 cut(s)	372, 1180
CviAII	CATG	8 cut(s)	124, 299, 364, 683, 692, 865, 905, 1328
CviQI	GTAC	2 cut(s)	372, 1180
DdeI	CTNAG	2 cut(s)	323, 522
DraIII	CACNNNGTG	1 cut(s)	1156
EaeI	YGGCCR	2 cut(s)	390, 1172
Eam1104I	CTCTTC	2 cut(s)	187, 1408
EarI	CTCTTC	2 cut(s)	187, 1408
Ecl136II	GAGCTC	1 cut(s)	19
Eco130I	CCWWGG	1 cut(s)	642
Eco24I	GRGCYC	2 cut(s)	21, 1066
Eco32I	GATATC	1 cut(s)	805
Eco47I	GGWCC	3 cut(s)	737, 883, 939
Eco47III	AGCGCT	1 cut(s)	471
Eco53kI	GAGCTC	1 cut(s)	19
Eco72I	CACGTG	1 cut(s)	1170
Eco88I	CYCGRG	3 cut(s)	90, 446, 535
EcoICRI	GAGCTC	1 cut(s)	19
EcoNI	CCTNNNNNAGG	2 cut(s)	42, 914
EcoO109I	RGGNCCY	2 cut(s)	737, 1063
EcoRI	GAATTC	1 cut(s)	1126
EcoRII	CCWGG	5 cut(s)	37, 51, 574, 885, 909
EcoRV	GATATC	1 cut(s)	805
EcoT14I	CCWWGG	1 cut(s)	642
EcoT38I	GRGCYC	2 cut(s)	21, 1066
ErhI	CCWWGG	1 cut(s)	642
Esp3I	CGTCTC	1 cut(s)	87
FaeI	CATG	8 cut(s)	127, 302, 367, 686, 695, 868, 908, 1331
FaqI	GGGAC	2 cut(s)	316, 1425
FatI	CATG	8 cut(s)	123, 298, 363, 682, 691, 864, 904, 1327
FauI	CCCGC	4 cut(s)	142, 340, 913, 1074
FbaI	TGATCA	3 cut(s)	108, 823, 1423
FblI	GTMKAC	1 cut(s)	360
Fnu4HI	GCNGC	5 cut(s)	438, 441, 473, 561, 711
FokI	GGATG	4 cut(s)	14, 19, 518, 1397
FriOI	GRGCYC	2 cut(s)	21, 1066
Fsp4HI	GCNGC	5 cut(s)	438, 441, 473, 561, 711
FspBI	CTAG	2 cut(s)	411, 674
GlaI	GCGC	5 cut(s)	436, 444, 471, 476, 1282
GluI	GCNGC	5 cut(s)	438, 441, 473, 561, 711
GsaI	CCCAGC	1 cut(s)	1063
GsuI	CTGGAG	2 cut(s)	415, 932
HaeII	RGCGCY	2 cut(s)	438, 473
HaeIII	GGCC	7 cut(s)	48, 392, 788, 924, 952, 1064, 1174
HapII	CCGG	3 cut(s)	731, 1002, 1160
HgaI	GACGC	1 cut(s)	527
HhaI	GCGC	5 cut(s)	437, 445, 472, 477, 1283
Hin1II	CATG	8 cut(s)	127, 302, 367, 686, 695, 868, 908, 1331
Hin6I	GCGC	5 cut(s)	435, 443, 470, 475, 1281
HinP1I	GCGC	5 cut(s)	435, 443, 470, 475, 1281
HincII	GTYRAC	1 cut(s)	361
HindII	GTYRAC	1 cut(s)	361
HindIII	AAGCTT	2 cut(s)	871, 1374
HpaII	CCGG	3 cut(s)	731, 1002, 1160
HphI	GGTGA	6 cut(s)	418, 667, 901, 1079, 1225, 1324
Hpy166II	GTNNAC	2 cut(s)	361, 658
Hpy188I	TCNGA	5 cut(s)	517, 706, 781, 802, 1428
Hpy188III	TCNNGA	7 cut(s)	90, 92, 106, 124, 482, 535, 808
Hpy8I	GTNNAC	2 cut(s)	361, 658
Hpy99I	CGWCG	4 cut(s)	362, 389, 521, 951
HpyAV	CCTTC	6 cut(s)	242, 479, 698, 1210, 1279, 1357
HpyCH4III	ACNGT	2 cut(s)	115, 1154
HpyCH4IV	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
HpyCH4V	TGCA	3 cut(s)	14, 176, 498
HpyF10VI	GCNNNNNNNGC	8 cut(s)	258, 495, 692, 861, 870, 1082, 1156, 1257
HpyF3I	CTNAG	2 cut(s)	323, 522
HpySE526I	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
Hsp92II	CATG	8 cut(s)	127, 302, 367, 686, 695, 868, 908, 1331
HspAI	GCGC	5 cut(s)	435, 443, 470, 475, 1281
Ksp22I	TGATCA	3 cut(s)	108, 823, 1423
LmnI	GCTCC	4 cut(s)	599, 913, 1186, 1257
Lsp1109I	GCAGC	2 cut(s)	459, 547
LweI	GCATC	3 cut(s)	145, 298, 697
MabI	ACCWGGT	2 cut(s)	51, 885
MaeI	CTAG	2 cut(s)	411, 674
MaeII	ACGT	6 cut(s)	387, 417, 662, 946, 1169, 1321
MaeIII	GTNAC	2 cut(s)	983, 1322
MboII	GAAGA	4 cut(s)	174, 177, 415, 1395
MhlI	GDGCHC	2 cut(s)	21, 1066
MlsI	TGGCCA	1 cut(s)	1174
MluCI	AATT	6 cut(s)	398, 969, 1126, 1220, 1226, 1239
MluI	ACGCGT	1 cut(s)	1200
MluNI	TGGCCA	1 cut(s)	1174
MlyI	GAGTC	7 cut(s)	173, 176, 331, 338, 506, 1014, 1150
MmeI	TCCRAC	1 cut(s)	540
Mox20I	TGGCCA	1 cut(s)	1174
MroXI	GAANNNNTTC	2 cut(s)	609, 662
MscI	TGGCCA	1 cut(s)	1174
MseI	TTAA	3 cut(s)	747, 1197, 1432
Msp20I	TGGCCA	1 cut(s)	1174
MspA1I	CMGCKG	3 cut(s)	137, 560, 1210
MspI	CCGG	3 cut(s)	731, 1002, 1160
MspR9I	CCNGG	5 cut(s)	39, 53, 576, 887, 911
MteI	GCGCNGCGC	1 cut(s)	473
MvaI	CCWGG	5 cut(s)	39, 53, 576, 887, 911
MvnI	CGCG	6 cut(s)	443, 477, 713, 1184, 1202, 1283
MwoI	GCNNNNNNNGC	8 cut(s)	258, 495, 692, 861, 870, 1082, 1156, 1257
NlaIII	CATG	8 cut(s)	127, 302, 367, 686, 695, 868, 908, 1331
NlaIV	GGNNCC	5 cut(s)	739, 953, 1022, 1064, 1065
NmuCI	GTSAC	2 cut(s)	983, 1322
NspI	RCATGY	2 cut(s)	367, 686
PaeI	GCATGC	1 cut(s)	686
PaeR7I	CTCGAG	1 cut(s)	90
PagI	TCATGA	1 cut(s)	123
PciI	ACATGT	1 cut(s)	363
PcsI	WCGNNNNNNNCGW	1 cut(s)	390
PdmI	GAANNNNTTC	2 cut(s)	609, 662
PfeI	GAWTC	3 cut(s)	605, 677, 776
PflMI	CCANNNNNTGG	2 cut(s)	38, 910
PkrI	GCNGC	5 cut(s)	439, 442, 474, 562, 712
Ple19I	CGATCG	1 cut(s)	1030
PleI	GAGTC	7 cut(s)	173, 175, 331, 337, 506, 1013, 1149
PmaCI	CACGTG	1 cut(s)	1170
PmlI	CACGTG	1 cut(s)	1170
PpsI	GAGTC	7 cut(s)	173, 175, 331, 337, 506, 1013, 1149
Ppu21I	YACGTR	2 cut(s)	418, 1170
PpuMI	RGGWCCY	1 cut(s)	737
PscI	ACATGT	1 cut(s)	363
Psp124BI	GAGCTC	1 cut(s)	21
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	5 cut(s)	37, 51, 574, 885, 909
PspCI	CACGTG	1 cut(s)	1170
PspFI	CCCAGC	1 cut(s)	1059
PspGI	CCWGG	5 cut(s)	37, 51, 574, 885, 909
PspN4I	GGNNCC	5 cut(s)	739, 953, 1022, 1064, 1065
PspOMI	GGGCCC	1 cut(s)	1062
PspPI	GGNCC	7 cut(s)	737, 883, 922, 939, 951, 1062, 1063
PspPPI	RGGWCCY	1 cut(s)	737
PstI	CTGCAG	1 cut(s)	16
PvuI	CGATCG	1 cut(s)	1030
PvuII	CAGCTG	2 cut(s)	560, 1210
RsaI	GTAC	2 cut(s)	373, 1181
RsaNI	GTAC	2 cut(s)	372, 1180
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	1 cut(s)	359
SaqAI	TTAA	3 cut(s)	747, 1197, 1432
SatI	GCNGC	5 cut(s)	438, 441, 473, 561, 711
Sau96I	GGNCC	7 cut(s)	737, 883, 922, 939, 951, 1062, 1063
SchI	GAGTC	7 cut(s)	173, 176, 331, 338, 506, 1014, 1150
ScrFI	CCNGG	5 cut(s)	39, 53, 576, 887, 911
SduI	GDGCHC	2 cut(s)	21, 1066
SexAI	ACCWGGT	2 cut(s)	51, 885
SfaNI	GCATC	3 cut(s)	145, 298, 697
SfcI	CTRYAG	3 cut(s)	12, 840, 1252
Sfr274I	CTCGAG	1 cut(s)	90
SinI	GGWCC	3 cut(s)	737, 883, 939
SlaI	CTCGAG	1 cut(s)	90
SmlI	CTYRAG	3 cut(s)	65, 90, 1136
SmoI	CTYRAG	3 cut(s)	65, 90, 1136
SphI	GCATGC	1 cut(s)	686
Sse9I	AATT	6 cut(s)	398, 969, 1126, 1220, 1226, 1239
SspMI	CTAG	2 cut(s)	411, 674
SstI	GAGCTC	1 cut(s)	21
StyD4I	CCNGG	5 cut(s)	37, 51, 574, 885, 909
StyI	CCWWGG	1 cut(s)	642
TaaI	ACNGT	2 cut(s)	115, 1154
TaiI	ACGT	6 cut(s)	390, 420, 665, 949, 1172, 1324
TaqI	TCGA	7 cut(s)	91, 165, 340, 360, 384, 1026, 1030
TasI	AATT	6 cut(s)	398, 969, 1126, 1220, 1226, 1239
TauI	GCSGC	3 cut(s)	440, 443, 713
TfiI	GAWTC	3 cut(s)	605, 677, 776
Tru1I	TTAA	3 cut(s)	747, 1197, 1432
Tru9I	TTAA	3 cut(s)	747, 1197, 1432
TscAI	CASTG	3 cut(s)	118, 157, 259
TseFI	GTSAC	2 cut(s)	983, 1322
TseI	GCWGC	2 cut(s)	472, 560
Tsp45I	GTSAC	2 cut(s)	983, 1322
TspDTI	ATGAA	7 cut(s)	16, 140, 202, 680, 690, 777, 1331
TspGWI	ACGGA	1 cut(s)	260
TspRI	CASTG	3 cut(s)	118, 157, 259
Van91I	CCANNNNNTGG	2 cut(s)	38, 910
VpaK11BI	GGWCC	3 cut(s)	737, 883, 939
XagI	CCTNNNNNAGG	2 cut(s)	42, 914
XapI	RAATTY	1 cut(s)	1126
XceI	RCATGY	2 cut(s)	367, 686
XcmI	CCANNNNNNNNNTGG	1 cut(s)	649
XhoI	CTCGAG	1 cut(s)	90
XmiI	GTMKAC	1 cut(s)	360
XmnI	GAANNNNTTC	2 cut(s)	609, 662
XspI	CTAG	2 cut(s)	411, 674

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.