Rmu_sc0003129.1_g000005

Small subunit processome component 20 homolog

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003129.1
Physical Location & Seq
Forward (+)
12931 .. 15738
2808 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003129.1_g000005.1.cds

Sequence Viewer

Length: 2808 bp
atgtcgttccatggctttgatcccggggatcataacaactggtatcagagcccgcacttggagcctttactggcgagtccggcggcttacggctgtgggttctccgacgggtatcacagctctccttatcattcttatggtagctctacctgtgagtttacccaattttcattgcaaccaaacccttacccaccattgcaactcaacccttctgcaaccatcatcaatggccacttactccctcaccaatttccatgtgttcctccaactcactcacagttcttccctcctccatacttgcaaccgattcatcctattgctcctcaaccactcaccacaactcctcaaagcccatctattcctacttaccactcacctcatcctaacccaaatctctggattcatccttcaatttcgcaaagccattcacaacctatttaccattctgctcctccaccttctgcttctgagcaaccacgactaatttcagatctaaagcaggttgaacctgcctttccacttcacccaatttcaatggaatctgaccagatacataaagatcaaatggaggcaaggatttcgaagacgcatgattcttttgaagccatccgctccgaacaatcaacattccaggctgagattttagcagagctacgtcagctacgtttgggtcccaaaaacccagtgactgaagccgattcgaatttgttgaagtttgggtcactacctgcgggatccctcactcttacagtggctaatggttcctcatcaacgttgtcggcatcatcgagaggtataccgatttctgaaaaacccaacttaaaccttagtccccatgaagttattttgggcttgaataaggattttaccactgcttttgttaatggaaatcatagtgagcataccactacagcggtggtgactgaagaacttgtgttaaatgttgataaaaatattgctagcggtgttactggagtcaaattttctgatagttacggtagtgatgttgccaatagtatagtgtggaggaatgatgctcaaacacattcctttcaacatactagctttagagatggttcttctgcagggtatggggtactgggctcccataatcataattcggttggaaatataagagtcgatttccatgagagagaggagaaagaacttgaagatgaagctgatgaagatgataacgaggatgaaggggaagcaatctatgtgtatctttgctgccaactgaaggcacaacttattggtgatgcagccgacaaactaattacacaaaatctggcattcactgtgtgtggtttgcattatctgatgggacaaatagagtgtggagattctttgtcaagtatattgggtttttgtgccaaagaatgtggcgagtttggtgtcaaggagcatagtgatgggagaacttttgactcttatcagtttacctacattagcgttcaagtgcatgttgaggatccaattactgagatgtcaagttcaaagggaatggacaaacttcttcaagcgtttgggatatatatagcctttgcttatttggcctaccatctttgctcagttggtccacaactgttaattgagcaattcattgatgttgcattcgttgggaatttttatgatacaaatgtcgatcaatggctccctgctcatgatgaaagatccttttgcgaaggtacaaagagaatcagcagaaggttactcacattgcttaccgtccatcacttcaataataagatggtccaacaattcagttacctgcagataattctgaagaaactcattcaggcagaactgcaagtttgtaagtctaacttggataaactttctgatagttcttttcttgtgtggtcattccagttactagagtccaagatctcatttgaacgtccacaaccacaagtataccatgttggcagtagaaaaacattgaggattattggtttttatgattctagtggtcatcagcctttagcatggtgcacttttaacccatgttcagaggataactctcacatcttcttagtcgacattcttggtggcttttgtcttgttgcactttgtagcattgaagtgactcttgttggcatgctgaacatcattgttgctgcttcactttgtgttgtctgcttaactaatgttttacttaagagtatagctagtttcctatcttggaaattatctagctactattgcaagtgcaactcgattcttcctatagttgtaattgtggatgcttcagaacagattcaacaaagtttcatcaggattgtcttgtacagtatgtttgtctcatacattatgatggcacaaaaaatcatagttgaggataatacaaagcaggttggtaccacatggacatttgaaagcactgacataattactgggtctatcaagatgtgcaacgatgaatgggggcagcctaccagtaagttagactgtataatcctcatactggaaattgccacgagctgttatgaacttcaagacacctttgccaatgtcagaatgggtatgatgacaccgtcctacacctccaatgacaatcttggggtgcatgaggccacaaagatgaccaaacttgctgataaaggcaacgtctcatttcatcaatggggtatcacatttttcatcttctacttcgagtttgtctatcatctcttcatgtctcagtgttgctggtatcacattcttggggttgcttcagaaactacgataatttttaagatgctccacatggttgatttttgtcaagatgctccacatgctcccagattttcattcagaatatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

935

Amino Acids

104.5

Weight (kDa)

5.44

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 5 cut(s) 490, 517, 736, 1782, 2347
Acc65I GGTACC 1 cut(s) 2363
AccB1I GGYRCC 1 cut(s) 2363
AccBSI CCGCTC 1 cut(s) 612
AccI GTMKAC 3 cut(s) 796, 1920, 2043
AciI CCGC 6 cut(s) 53, 83, 610, 731, 914, 963
AclI AACGTT 1 cut(s) 773
AclWI GGATC 7 cut(s) 14, 36, 729, 742, 1469, 1482, 1671
AcoI YGGCCR 1 cut(s) 229
AcsI RAATTY 3 cut(s) 703, 980, 1627
AcuI CTGAAG 6 cut(s) 711, 945, 1262, 1808, 2238, 2703
AdeI CACNNNGTG 2 cut(s) 1305, 2135
AfaI GTAC 4 cut(s) 1098, 1693, 2294, 2365
AfiI CCNNNNNNNGG 3 cut(s) 58, 1243, 2470
AflII CTTAAG 1 cut(s) 2162
AjnI CCWGG 1 cut(s) 630
AluBI AGCT 9 cut(s) 120, 144, 652, 661, 1065, 1181, 2174, 2202, 2487
AluI AGCT 9 cut(s) 120, 144, 652, 661, 1065, 1181, 2174, 2202, 2487
Alw21I GWGCWC 1 cut(s) 2000
Alw26I GTCTC 3 cut(s) 2311, 2620, 2688
Alw44I GTGCAC 1 cut(s) 1996
AlwI GGATC 7 cut(s) 14, 36, 729, 742, 1469, 1482, 1671
AlwNI CAGNNNCTG 1 cut(s) 689
Ama87I CYCGRG 1 cut(s) 23
AoxI GGCC 3 cut(s) 229, 1557, 2577
ApaLI GTGCAC 1 cut(s) 1996
ApeKI GCWGC 4 cut(s) 1233, 1265, 2123, 2434
ApoI RAATTY 3 cut(s) 703, 980, 1627
Asp700I GAANNNNTTC 1 cut(s) 2262
Asp718I GGTACC 1 cut(s) 2363
AspS9I GGNCC 3 cut(s) 671, 1580, 1756
AsuC2I CCSGG 2 cut(s) 24, 25
AsuHPI GGTGA 6 cut(s) 236, 325, 366, 515, 931, 1271
AsuII TTCGAA 2 cut(s) 581, 701
AsuNHI GCTAGC 1 cut(s) 959
AvaI CYCGRG 1 cut(s) 23
AvaII GGWCC 3 cut(s) 671, 1580, 1756
BaeGI GKGCMC 1 cut(s) 2000
BaeI ACNNNNGTAYC 2 cut(s) 1629, 1662
BalI TGGCCA 1 cut(s) 231
BamHI GGATCC 2 cut(s) 734, 1474
BanI GGYRCC 1 cut(s) 2363
BanII GRGCYC 2 cut(s) 53, 1106
BauI CACGAG 1 cut(s) 2482
BbsI GAAGAC 1 cut(s) 590
Bbv12I GWGCWC 1 cut(s) 2000
BbvI GCAGC 4 cut(s) 1220, 1277, 2110, 2446
BceAI ACGGC 1 cut(s) 106
BcgI CGANNNNNNTGC 2 cut(s) 561, 595
BciT130I CCWGG 1 cut(s) 632
BcnI CCSGG 2 cut(s) 24, 25
BcoDI GTCTC 3 cut(s) 2311, 2620, 2688
BfaI CTAG 6 cut(s) 960, 1062, 1880, 1971, 2175, 2199
BfmI CTRYAG 4 cut(s) 909, 1083, 1775, 2232
BfrI CTTAAG 1 cut(s) 2162
BfuAI ACCTGC 5 cut(s) 490, 517, 736, 1782, 2347
BglII AGATCT 2 cut(s) 490, 1890
BisI GCNGC 5 cut(s) 84, 1234, 1266, 2124, 2435
BlsI GCNGC 5 cut(s) 85, 1235, 1267, 2125, 2436
Bme1390I CCNGG 3 cut(s) 24, 25, 632
Bme18I GGWCC 3 cut(s) 671, 1580, 1756
BmeT110I CYCGRG 1 cut(s) 23
BmgT120I GGNCC 3 cut(s) 671, 1580, 1756
BmiI GGNNCC 9 cut(s) 63, 672, 673, 736, 763, 1105, 1476, 1658, 2365
BmrFI CCNGG 3 cut(s) 24, 25, 632
BmrI ACTGGG 3 cut(s) 677, 1109, 2409
BmsI GCATC 6 cut(s) 791, 1024, 1252, 2239, 2733, 2761
BmtI GCTAGC 1 cut(s) 963
BmuI ACTGGG 3 cut(s) 677, 1109, 2409
BpiI GAAGAC 1 cut(s) 590
BplI GAGNNNNNCTC 2 cut(s) 2009, 2041
BpmI CTGGAG 1 cut(s) 993
Bpu14I TTCGAA 2 cut(s) 581, 701
BpuMI CCSGG 2 cut(s) 24, 25
BsaJI CCNNGG 3 cut(s) 10, 23, 24
BsaXI ACNNNNNCTCC 2 cut(s) 325, 355
Bsc4I CCNNNNNNNGG 3 cut(s) 58, 1243, 2470
Bse1I ACTGG 9 cut(s) 44, 75, 683, 976, 1104, 1873, 2404, 2442, 2475
Bse3DI GCAATG 3 cut(s) 170, 194, 1721
BseBI CCWGG 1 cut(s) 632
BseDI CCNNGG 3 cut(s) 10, 23, 24
BseGI GGATG 6 cut(s) 310, 379, 403, 606, 1207, 2254
BseLI CCNNNNNNNGG 3 cut(s) 58, 1243, 2470
BseMI GCAATG 3 cut(s) 170, 194, 1721
BseMII CTCAG 5 cut(s) 459, 627, 1476, 1587, 2699
BseNI ACTGG 9 cut(s) 44, 75, 683, 976, 1104, 1873, 2404, 2442, 2475
BseRI GAGGAG 5 cut(s) 279, 312, 333, 441, 1172
BseSI GKGCMC 1 cut(s) 2000
BseXI GCAGC 4 cut(s) 1220, 1277, 2110, 2446
BshFI GGCC 3 cut(s) 231, 1559, 2579
BshNI GGYRCC 1 cut(s) 2363
BsiHKAI GWGCWC 1 cut(s) 2000
BsiHKCI CYCGRG 1 cut(s) 23
BsiSI CCGG 2 cut(s) 24, 80
BslFI GGGAC 3 cut(s) 657, 816, 1341
BslI CCNNNNNNNGG 3 cut(s) 58, 1243, 2470
BsmAI GTCTC 3 cut(s) 2311, 2620, 2688
BsmBI CGTCTC 1 cut(s) 2620
BsmFI GGGAC 3 cut(s) 657, 816, 1341
BsmI GAATGC 2 cut(s) 1295, 1616
BsnI GGCC 3 cut(s) 231, 1559, 2579
BsoBI CYCGRG 1 cut(s) 23
Bsp119I TTCGAA 2 cut(s) 581, 701
Bsp1286I GDGCHC 3 cut(s) 53, 1106, 2000
Bsp1407I TGTACA 1 cut(s) 2292
Bsp143I GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
Bsp19I CCATGG 1 cut(s) 10
BspACI CCGC 6 cut(s) 53, 83, 610, 731, 914, 963
BspANI GGCC 3 cut(s) 231, 1559, 2579
BspCNI CTCAG 5 cut(s) 460, 628, 1477, 1586, 2698
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 9 cut(s) 63, 672, 673, 736, 763, 1105, 1476, 1658, 2365
BspMAI CTGCAG 2 cut(s) 1087, 1779
BspMI ACCTGC 5 cut(s) 490, 517, 736, 1782, 2347
BspOI GCTAGC 1 cut(s) 963
BspPI GGATC 7 cut(s) 14, 36, 729, 742, 1469, 1482, 1671
BspT104I TTCGAA 2 cut(s) 581, 701
BspT107I GGYRCC 1 cut(s) 2363
BspTI CTTAAG 1 cut(s) 2162
BsrBI CCGCTC 1 cut(s) 612
BsrDI GCAATG 3 cut(s) 170, 194, 1721
BsrGI TGTACA 1 cut(s) 2292
BsrI ACTGG 9 cut(s) 44, 75, 683, 976, 1104, 1873, 2404, 2442, 2475
BssECI CCNNGG 3 cut(s) 10, 23, 24
BssMI GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
BssNAI GTATAC 2 cut(s) 797, 1921
BssSI CACGAG 1 cut(s) 2482
BssT1I CCWWGG 1 cut(s) 10
Bst1107I GTATAC 2 cut(s) 797, 1921
Bst2BI CACGAG 1 cut(s) 2482
Bst2UI CCWGG 1 cut(s) 632
Bst4CI ACNGT 9 cut(s) 279, 751, 998, 1303, 1590, 1732, 2297, 2456, 2541
Bst6I CTCTTC 1 cut(s) 2681
BstAFI CTTAAG 1 cut(s) 2162
BstAUI TGTACA 1 cut(s) 2292
BstBI TTCGAA 2 cut(s) 581, 701
BstC8I GCNNGC 3 cut(s) 53, 961, 2105
BstDEI CTNAG 7 cut(s) 468, 636, 827, 1485, 1573, 2038, 2685
BstDSI CCRYGG 1 cut(s) 10
BstF5I GGATG 6 cut(s) 310, 379, 403, 606, 1207, 2254
BstKTI GATC 9 cut(s) 22, 31, 493, 562, 737, 1477, 1651, 1679, 1893
BstMAI GTCTC 3 cut(s) 2311, 2620, 2688
BstMBI GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
BstMWI GCNNNNNNNGC 6 cut(s) 61, 80, 658, 1556, 2208, 2780
BstNI CCWGG 1 cut(s) 632
BstNSI RCATGY 3 cut(s) 1469, 2107, 2783
BstSCI CCNGG 3 cut(s) 22, 23, 630
BstSFI CTRYAG 4 cut(s) 909, 1083, 1775, 2232
BstSLI GKGCMC 1 cut(s) 2000
BstV1I GCAGC 4 cut(s) 1220, 1277, 2110, 2446
BstV2I GAAGAC 1 cut(s) 590
BstX2I RGATCY 5 cut(s) 490, 734, 1474, 1676, 1890
BstXI CCANNNNNNTGG 1 cut(s) 396
BstYI RGATCY 5 cut(s) 490, 734, 1474, 1676, 1890
BstZ17I GTATAC 2 cut(s) 797, 1921
BsuRI GGCC 3 cut(s) 231, 1559, 2579
BtgI CCRYGG 1 cut(s) 10
BtsCI GGATG 6 cut(s) 310, 379, 403, 606, 1207, 2254
BtsI GCAGTG 1 cut(s) 870
BtsIMutI CAGTG 6 cut(s) 690, 756, 870, 1299, 2385, 2693
BveI ACCTGC 5 cut(s) 490, 517, 736, 1782, 2347
Cac8I GCNNGC 3 cut(s) 53, 961, 2105
CaiI CAGNNNCTG 1 cut(s) 689
CciI TCATGA 1 cut(s) 1666
Cfr13I GGNCC 3 cut(s) 671, 1580, 1756
Cfr9I CCCGGG 1 cut(s) 23
CseI GACGC 1 cut(s) 595
Csp6I GTAC 4 cut(s) 1097, 1692, 2293, 2364
CspCI CAANNNNNGTGG 4 cut(s) 859, 894, 1366, 1401
CviQI GTAC 4 cut(s) 1097, 1692, 2293, 2364
DdeI CTNAG 7 cut(s) 468, 636, 827, 1485, 1573, 2038, 2685
DpnI GATC 9 cut(s) 21, 30, 492, 561, 736, 1476, 1650, 1678, 1892
DpnII GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
DraIII CACNNNGTG 2 cut(s) 1305, 2135
EaeI YGGCCR 1 cut(s) 229
Eam1104I CTCTTC 1 cut(s) 2681
EarI CTCTTC 1 cut(s) 2681
Eco130I CCWWGG 1 cut(s) 10
Eco24I GRGCYC 2 cut(s) 53, 1106
Eco47I GGWCC 3 cut(s) 671, 1580, 1756
Eco57I CTGAAG 6 cut(s) 711, 945, 1262, 1808, 2238, 2703
Eco88I CYCGRG 1 cut(s) 23
EcoO109I RGGNCCY 1 cut(s) 671
EcoRII CCWGG 1 cut(s) 630
EcoT14I CCWWGG 1 cut(s) 10
EcoT38I GRGCYC 2 cut(s) 53, 1106
ErhI CCWWGG 1 cut(s) 10
Esp3I CGTCTC 1 cut(s) 2620
FalI AAGNNNNNCTT 4 cut(s) 1814, 1846, 2079, 2111
FaqI GGGAC 3 cut(s) 657, 816, 1341
FauI CCCGC 2 cut(s) 60, 724
FblI GTMKAC 3 cut(s) 796, 1920, 2043
Fnu4HI GCNGC 5 cut(s) 84, 1234, 1266, 2124, 2435
FokI GGATG 6 cut(s) 297, 366, 390, 593, 1214, 2261
FriOI GRGCYC 2 cut(s) 53, 1106
Fsp4HI GCNGC 5 cut(s) 84, 1234, 1266, 2124, 2435
FspBI CTAG 6 cut(s) 960, 1062, 1880, 1971, 2175, 2199
GluI GCNGC 5 cut(s) 84, 1234, 1266, 2124, 2435
GsuI CTGGAG 1 cut(s) 993
HaeIII GGCC 3 cut(s) 231, 1559, 2579
HapII CCGG 2 cut(s) 24, 80
HgaI GACGC 1 cut(s) 595
HincII GTYRAC 1 cut(s) 2044
HindII GTYRAC 1 cut(s) 2044
HpaII CCGG 2 cut(s) 24, 80
HphI GGTGA 6 cut(s) 236, 325, 366, 515, 931, 1271
Hpy166II GTNNAC 8 cut(s) 159, 797, 1443, 1583, 1907, 1921, 1998, 2044
Hpy188III TCNNGA 7 cut(s) 397, 789, 1667, 2281, 2410, 2501, 2768
Hpy8I GTNNAC 8 cut(s) 159, 797, 1443, 1583, 1907, 1921, 1998, 2044
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 7 cut(s) 219, 417, 468, 1199, 1237, 1682, 1704
HpyCH4III ACNGT 9 cut(s) 279, 751, 998, 1303, 1590, 1732, 2297, 2456, 2541
HpyCH4IV ACGT 5 cut(s) 655, 664, 773, 1903, 2613
HpyF10VI GCNNNNNNNGC 6 cut(s) 61, 80, 658, 1556, 2208, 2780
HpyF3I CTNAG 7 cut(s) 468, 636, 827, 1485, 1573, 2038, 2685
HpySE526I ACGT 5 cut(s) 655, 664, 773, 1903, 2613
KflI GGGWCCC 1 cut(s) 671
KpnI GGTACC 1 cut(s) 2367
Kzo9I GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
Lsp1109I GCAGC 4 cut(s) 1220, 1277, 2110, 2446
LweI GCATC 6 cut(s) 791, 1024, 1252, 2239, 2733, 2761
MaeI CTAG 6 cut(s) 960, 1062, 1880, 1971, 2175, 2199
MaeII ACGT 5 cut(s) 655, 664, 773, 1903, 2613
MaeIII GTNAC 9 cut(s) 685, 720, 919, 967, 992, 1713, 1769, 1875, 2089
MalI GATC 9 cut(s) 21, 30, 492, 561, 736, 1476, 1650, 1678, 1892
MbiI CCGCTC 1 cut(s) 612
MboI GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
MflI RGATCY 5 cut(s) 490, 734, 1474, 1676, 1890
MhlI GDGCHC 3 cut(s) 53, 1106, 2000
MlsI TGGCCA 1 cut(s) 231
MluNI TGGCCA 1 cut(s) 231
MlyI GAGTC 6 cut(s) 85, 984, 1146, 1424, 1892, 2086
MmeI TCCRAC 4 cut(s) 129, 290, 1105, 1783
Mox20I TGGCCA 1 cut(s) 231
MroXI GAANNNNTTC 1 cut(s) 2262
MscI TGGCCA 1 cut(s) 231
MseI TTAA 8 cut(s) 821, 882, 938, 1592, 2004, 2147, 2163, 2739
MslI CAYNNNNRTG 5 cut(s) 135, 1413, 2087, 2318, 2585
Msp20I TGGCCA 1 cut(s) 231
MspA1I CMGCKG 1 cut(s) 914
MspCI CTTAAG 1 cut(s) 2162
MspI CCGG 2 cut(s) 24, 80
MspR9I CCNGG 3 cut(s) 24, 25, 632
Mva1269I GAATGC 2 cut(s) 1295, 1616
MvaI CCWGG 1 cut(s) 632
MwoI GCNNNNNNNGC 6 cut(s) 61, 80, 658, 1556, 2208, 2780
NciI CCSGG 2 cut(s) 24, 25
NcoI CCATGG 1 cut(s) 10
NdeII GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
NheI GCTAGC 1 cut(s) 959
NlaIV GGNNCC 9 cut(s) 63, 672, 673, 736, 763, 1105, 1476, 1658, 2365
NmuCI GTSAC 4 cut(s) 685, 720, 919, 2089
NspI RCATGY 3 cut(s) 1469, 2107, 2783
NspV TTCGAA 2 cut(s) 581, 701
PaeI GCATGC 1 cut(s) 2107
PagI TCATGA 1 cut(s) 1666
PcsI WCGNNNNNNNCGW 2 cut(s) 661, 785
PctI GAATGC 2 cut(s) 1295, 1616
PdmI GAANNNNTTC 1 cut(s) 2262
PflFI GACNNNGTC 1 cut(s) 2539
PkrI GCNGC 5 cut(s) 85, 1235, 1267, 2125, 2436
PleI GAGTC 6 cut(s) 84, 983, 1145, 1424, 1891, 2086
PpsI GAGTC 6 cut(s) 84, 983, 1145, 1424, 1891, 2086
PpuMI RGGWCCY 1 cut(s) 671
Psp1406I AACGTT 1 cut(s) 773
Psp5II RGGWCCY 1 cut(s) 671
Psp6I CCWGG 1 cut(s) 630
PspGI CCWGG 1 cut(s) 630
PspN4I GGNNCC 9 cut(s) 63, 672, 673, 736, 763, 1105, 1476, 1658, 2365
PspPI GGNCC 3 cut(s) 671, 1580, 1756
PspPPI RGGWCCY 1 cut(s) 671
PstI CTGCAG 2 cut(s) 1087, 1779
PstNI CAGNNNCTG 1 cut(s) 689
PsuI RGATCY 5 cut(s) 490, 734, 1474, 1676, 1890
PsyI GACNNNGTC 1 cut(s) 2539
RsaI GTAC 4 cut(s) 1098, 1693, 2294, 2365
RsaNI GTAC 4 cut(s) 1097, 1692, 2293, 2364
RseI CAYNNNNRTG 5 cut(s) 135, 1413, 2087, 2318, 2585
SalI GTCGAC 1 cut(s) 2042
SaqAI TTAA 8 cut(s) 821, 882, 938, 1592, 2004, 2147, 2163, 2739
SatI GCNGC 5 cut(s) 84, 1234, 1266, 2124, 2435
Sau3AI GATC 9 cut(s) 19, 28, 490, 559, 734, 1474, 1648, 1676, 1890
Sau96I GGNCC 3 cut(s) 671, 1580, 1756
SchI GAGTC 6 cut(s) 85, 984, 1146, 1424, 1892, 2086
ScrFI CCNGG 3 cut(s) 24, 25, 632
SduI GDGCHC 3 cut(s) 53, 1106, 2000
SfaNI GCATC 6 cut(s) 791, 1024, 1252, 2239, 2733, 2761
SfcI CTRYAG 4 cut(s) 909, 1083, 1775, 2232
SfuI TTCGAA 2 cut(s) 581, 701
SinI GGWCC 3 cut(s) 671, 1580, 1756
SmaI CCCGGG 1 cut(s) 25
SmiMI CAYNNNNRTG 5 cut(s) 135, 1413, 2087, 2318, 2585
SmlI CTYRAG 1 cut(s) 2162
SmoI CTYRAG 1 cut(s) 2162
SphI GCATGC 1 cut(s) 2107
SsiI CCGC 6 cut(s) 53, 83, 610, 731, 914, 963
SspI AATATT 1 cut(s) 955
SspMI CTAG 6 cut(s) 960, 1062, 1880, 1971, 2175, 2199
StyD4I CCNGG 3 cut(s) 22, 23, 630
StyI CCWWGG 1 cut(s) 10
TaaI ACNGT 9 cut(s) 279, 751, 998, 1303, 1590, 1732, 2297, 2456, 2541
TaiI ACGT 5 cut(s) 658, 667, 776, 1906, 2616
TaqI TCGA 8 cut(s) 581, 701, 788, 1140, 1647, 2043, 2222, 2658
TatI WGTACW 1 cut(s) 2292
TauI GCSGC 1 cut(s) 86
Tru1I TTAA 8 cut(s) 821, 882, 938, 1592, 2004, 2147, 2163, 2739
Tru9I TTAA 8 cut(s) 821, 882, 938, 1592, 2004, 2147, 2163, 2739
TscAI CASTG 6 cut(s) 690, 756, 877, 1306, 2392, 2693
TseFI GTSAC 4 cut(s) 685, 720, 919, 2089
TseI GCWGC 4 cut(s) 1233, 1265, 2123, 2434
Tsp45I GTSAC 4 cut(s) 685, 720, 919, 2089
TspMI CCCGGG 1 cut(s) 23
TspRI CASTG 6 cut(s) 690, 756, 877, 1306, 2392, 2693
Tth111I GACNNNGTC 1 cut(s) 2539
Vha464I CTTAAG 1 cut(s) 2162
VneI GTGCAC 1 cut(s) 1996
VpaK11BI GGWCC 3 cut(s) 671, 1580, 1756
XapI RAATTY 3 cut(s) 703, 980, 1627
XceI RCATGY 3 cut(s) 1469, 2107, 2783
XcmI CCANNNNNNNNNTGG 2 cut(s) 913, 2521
XmaI CCCGGG 1 cut(s) 23
XmiI GTMKAC 3 cut(s) 796, 1920, 2043
XmnI GAANNNNTTC 1 cut(s) 2262
XspI CTAG 6 cut(s) 960, 1062, 1880, 1971, 2175, 2199
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.