Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000434.1

Orthogroup ID

OG0001453

Physical Location & Seq

Genomic Coordinates Reverse (-)

242816 .. 246319

Gene Structure 3504 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000434.1_g000059.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3504 bp

atggcataccatggctatgatcccggggatcatatcaactggtatcaaagcccgcaactgggcctgtttccgacgagtccgacgggttacagcggtgggtactactgccttccttcttctcatcctcacgttacccagttcccatcgcactcaagctacctaccacttccttctcaatttccattccaaccgagttactccccaccaccaccaccaccttcccacacaatcatcaatgggtttgttttcccttatcaatttccatccacccatactcatcattcacctgattctaacccaaatccctggatctatccttctatttcacaaagccattcctatgacccatcggttaccagtgtcaattcacacttcgtctccaccaaaaccatgcctacatcacctgtttaccattctgctccgtcaattccaacttttcagtcaccctcagtctccacttttgtgccccaacaccaatttactgatccaaaacctcgtcctctccatagcaagccgtttcggggttgcagatgtcgagtcgtcatgggtgcaaaagtgagagtttccaaaaagacccgaaatccagatctgctccgtgatgtgggtaagtacttgaggtccaagaggtaccacaggcgcggtctctgggtcatcaaggccaaaaacggtgatatattcccatgtcacaacgccaaggagacagttgcgattatggaggagcttcatcagctacttgtgggtcaaacaactccgattactgagccggagccgggctcgagtccattgaagtttgggtcactacctgcgggttctgtcgctctcacagcggctaatgggtcgtcatcaatgttgtccgcgtcatcgagaggtatacggatttctgaaaaacccaacttcaatcttagtccccatgaagttattttgggcttgaataaggattttgctactgctttaattactggaaatcatagtgagcacaccactacagcggtggtgactgaagaacttgtgttaaatgttgataaaactattgctgaaggtgttagtggagttacattttctgatattgctgttggtgaagatgataatgaggataaggatgatgaagggggaaatgagtgtatgatatttgggagctctgcagcttctaaaaagttcttgaaagagttgcaacgagagtcgaatactagttcttacttgggtgcagagagttatggtgaccattcttttagttataatgaggattctcaaagagttgatgggcagattgtaacggttgagggaaatgatgatttgatgagaaacaacaaagaaggtctgttagagaagctcagagatatgagttggcctgagaatgctaaatgggtggacaaccttacgtcggatattgagcaagagcaaccggtggatgtgcatgatggcctgacaggggagcttgcattttatacacaggctctaactcgaatgaggatggcctttgagaagcttcagttaatggggcttccatttctgagacctgaggactactatgcagaattggcaaagtccgagtcccaattggggaaagtgaagagccaatttttggtggaaatgactacaaatctgactcaaagctccttgtctcaggtatccactactctgaatttaaactttcaagatgttagaagctcttttgagagttttttgtccaatgtgattaagctctataatcttagttccttgacctgtaaagttggagcagaaatttggcctcctgatgatggggaatggttggatttggatggtgaaacctattatcgagttgttagaggatttcttgataacataaatgtgaaagagttggcacctttgattattaacgctcagaagctagagtcttctacaattgtagttgatagatcatgttgttgcggtattgttattgcttgtgttggtattgaattttcagataaagaacacaacattcttgatgaagtgaatgctcagggaggtattttggggcgtgctgtgcatgtgcttttcaagtctatgtcacaattcaatgatattgactttctcttgaatccatcggatggaaatagggattgtgcagttgtggcagttgataagattgttccttataccaagggaagacgatctcattttatatgtgctcaagttgagaatataaatgagcaggagtcaaaggaacttttgaacagttttccttgtcaagaagagtatgatatgagatctaaagaagatttagatgaagttgaagctagcagtattcccccacttattccttttatgccatttgcaatgaaacttgaccatttagataaggaaaggatggtcttcagaagaagtacttatcaaaaaattcttgcaatggagaaaaaaggggcacaagtcatagaatgtgatccaaagctaccagtggacaatctactcagttctgcaatatgtttagtgtggtatgactgcagaaacattggaaaaaacacaactgctcttgataaagcttcttcatgcttacctttgtacattgagagcctcgccacgaatattttgatattgctgagcattactttctgtagctgtatgactttgaagacacgattccacaagcatatcaacagagtcttacaagtgactaaaagcatcttgcagtctgccatcgatgctgtcactcatgattctcctcatgaaattgacattccttcctggaaagaggtatttaattcattggttatgcttgaaaaaaatctgaatcaattccatgatttttgtgttgatagggatctcaagaatataggggaagcattttctatctatctctgctgccaactgaagacacaacgtgttgatgatgcagccaacaaacggattacacaaaatatggcattcattgtgtgcggtgtgcattctttgtcaagtatattgggtgtttgtgccaaaggaggtggcaagtttggtgttaaggcgcatagtgatgggagaactttttacgcttaccagtttgcctgcattagtgttcaacatgttgtggatcaaattattgagatgtcaaacacaggtggtggagatataaatgtcccaaaattcaagattattgcttcacatcttgggatcacaactttctctgtcagtgctttgcagcaatttgggcatgaaagtctgagccaaccaattatggtggaagtctatgcagcaccagaaattgacctgcatgatatattccttgtacctggtacatcctatgtgcttactttaaacggagacccaacaattggtgtaaaagttgaatttacgattttggcattgctgcaaattgagtatcaaaatgagtatcatattgatccgatagacgtcaaagctgttattgcaatcacaattgttcaattgtattcaaaggaagctgctcaaatatataagaagttgaatatgatgacaaggagtgcatatgagtttgagactttggaggttatcttggtggaatgctcagcagcacttgacctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000280 GO:0000712 GO:0005575 GO:0005911 GO:0006139 GO:0006259 GO:0006310 GO:0006725 GO:0006807 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007131 GO:0008150 GO:0008152 GO:0009506 GO:0009987 GO:0016043 GO:0022402 GO:0022414 GO:0030054 GO:0034641 GO:0035825 GO:0043170 GO:0044237 GO:0044238 GO:0044260 GO:0045132 GO:0046483 GO:0048285 GO:0051304 GO:0051307 GO:0051321 GO:0055044 GO:0061982 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1167

Amino Acids

129.89

Weight (kDa)

5.57

Isoelectric Point (pI)

49.02

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22660
fragaria_vesca	FvH4_3g44241 FvH4_7g28160 FvH4_7g28160 FvH4_7g28160
malus_domestica	MD01G1185600.v1.1 MD07G1257700.v1.1
prunus_persica	Prupe.2G115300_v2.0.a1 Prupe.2G115400_v2.0.a1 Prupe.2G282000_v2.0.a1
pyrus_communis	pycom01g19720 pycom07g23070
rosa_chinensis	RchiOBHm_Chr1g0375101
rosa_laevigata	RLG00000000704 RLG00000019704 RLG00000019707 RLG00000026687 RLG00000029116
rosa_multiflora	Rmu_co8059840.1_g000001 Rmu_co8133218.1_g000001 Rmu_sc0000554.1_g000018 Rmu_sc0000665.1_g000018 Rmu_sc0001371.1_g000022 Rmu_sc0002268.1_g000036 Rmu_sc0003129.1_g000005 Rmu_sc0003710.1_g000012 Rmu_sc0005008.1_g000027 Rmu_sc0005278.1_g000015 Rmu_sc0005454.1_g000013 Rmu_sc0005454.1_g000014 Rmu_sc0006754.1_g000009 Rmu_sc0007581.1_g000002 Rmu_sc0008115.1_g000013 Rmu_sc0010589.1_g000001 Rmu_sc0013545.1_g000008 Rmu_sc0028055.1_g000001 Rmu_sc0032109.1_g000001 Rmu_ssc0000434.1_g000059
rosa_roxburghii	Rroxscaffold_3G00223090 Rroxscaffold_6G00388940 Rroxscaffold_7G00205890
rosa_rugosa	Rorug01G0388500 Rorug06G0420000
rosa_samantha	Rh1AG248100 Rh1AG398900 Rh1BG107200 Rh1BG365600 Rh1CG378500 Rh1DG396300 Rh4AG140200 Rh7BG018600
rosa_wichuraiana	Rw1G035420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1236
AatII	GACGTC	1 cut(s)	3354
Acc36I	ACCTGC	2 cut(s)	811, 3216
Acc65I	GGTACC	1 cut(s)	627
AccB1I	GGYRCC	2 cut(s)	627, 1843
AccB7I	CCANNNNNTGG	3 cut(s)	1582, 2072, 3272
AccI	GTMKAC	1 cut(s)	871
AccII	CGCG	2 cut(s)	639, 857
AciI	CCGC	9 cut(s)	53, 93, 639, 806, 827, 855, 989, 1911, 2898
AclWI	GGATC	9 cut(s)	14, 36, 317, 479, 2399, 2790, 3039, 3119, 3335
AcsI	RAATTY	6 cut(s)	1642, 1743, 1940, 2361, 3083, 3287
AcuI	CTGAAG	5 cut(s)	1020, 1056, 1472, 2323, 2852
AcyI	GRCGYC	1 cut(s)	3351
AdeI	CACNNNGTG	1 cut(s)	2843
AfaI	GTAC	7 cut(s)	101, 611, 629, 2350, 2525, 3228, 3235
AflIII	ACRYGT	2 cut(s)	2842, 3022
AgeI	ACCGGT	1 cut(s)	1402
AhlI	ACTAGT	1 cut(s)	1187
AjnI	CCWGG	3 cut(s)	305, 2705, 3229
AleI	CACNNNNGTG	1 cut(s)	461
Alw21I	GWGCWC	3 cut(s)	978, 1139, 2155
Alw26I	GTCTC	8 cut(s)	382, 457, 647, 692, 1507, 1626, 3255, 3449
AlwI	GGATC	9 cut(s)	14, 36, 317, 479, 2399, 2790, 3039, 3119, 3335
Ama87I	CYCGRG	2 cut(s)	23, 775
AoxI	GGCC	6 cut(s)	61, 657, 1346, 1420, 1473, 1748
ApeKI	GCWGC	8 cut(s)	1142, 2823, 2855, 3139, 3191, 3307, 3401, 3488
ApoI	RAATTY	6 cut(s)	1642, 1743, 1940, 2361, 3083, 3287
ArsI	GACNNNNNNTTYG	2 cut(s)	1535, 1567
AsiGI	ACCGGT	1 cut(s)	1402
Asp700I	GAANNNNTTC	1 cut(s)	2756
Asp718I	GGTACC	1 cut(s)	627
AspLEI	GCGC	2 cut(s)	639, 2968
AspS9I	GGNCC	2 cut(s)	61, 618
AsuC2I	CCSGG	3 cut(s)	24, 25, 771
AsuHPI	GGTGA	8 cut(s)	276, 393, 435, 680, 1006, 1088, 1229, 1796
AsuNHI	GCTAGC	1 cut(s)	2261
AvaI	CYCGRG	2 cut(s)	23, 775
AvaII	GGWCC	1 cut(s)	618
AxyI	CCTNAGG	1 cut(s)	1518
BaeGI	GKGCMC	2 cut(s)	468, 2389
BanI	GGYRCC	2 cut(s)	627, 1843
BanII	GRGCYC	2 cut(s)	776, 1139
BbsI	GAAGAC	5 cut(s)	1869, 2137, 2329, 2600, 2840
Bbv12I	GWGCWC	3 cut(s)	978, 1139, 2155
BbvI	GCAGC	8 cut(s)	1154, 2810, 2867, 3151, 3203, 3294, 3388, 3500
BceAI	ACGGC	1 cut(s)	499
BciT130I	CCWGG	3 cut(s)	307, 2707, 3231
BciVI	GTATCC	1 cut(s)	1639
BcnI	CCSGG	3 cut(s)	24, 25, 771
BcoDI	GTCTC	8 cut(s)	382, 457, 647, 692, 1507, 1626, 3255, 3449
BcuI	ACTAGT	1 cut(s)	1187
BfaI	CTAG	3 cut(s)	1188, 1871, 2262
BfmI	CTRYAG	4 cut(s)	984, 1140, 2464, 2575
BfuAI	ACCTGC	2 cut(s)	811, 3216
BfuI	GTATCC	1 cut(s)	1639
BglII	AGATCT	2 cut(s)	586, 2231
BisI	GCNGC	9 cut(s)	828, 1143, 2824, 2856, 3140, 3192, 3308, 3402, 3489
BlpI	GCTNAGC	2 cut(s)	2561, 3484
BlsI	GCNGC	9 cut(s)	829, 1144, 2825, 2857, 3141, 3193, 3309, 3403, 3490
BmcAI	AGTACT	2 cut(s)	611, 2350
Bme1390I	CCNGG	6 cut(s)	24, 25, 307, 771, 2707, 3231
Bme18I	GGWCC	1 cut(s)	618
BmeT110I	CYCGRG	2 cut(s)	23, 775
BmgT120I	GGNCC	2 cut(s)	61, 618
BmiI	GGNNCC	3 cut(s)	629, 768, 1845
BmrFI	CCNGG	6 cut(s)	24, 25, 307, 771, 2707, 3231
BmrI	ACTGGG	2 cut(s)	68, 130
BmsI	GCATC	3 cut(s)	2652, 2653, 2842
BmtI	GCTAGC	1 cut(s)	2265
BmuI	ACTGGG	2 cut(s)	68, 130
BpiI	GAAGAC	5 cut(s)	1869, 2137, 2329, 2600, 2840
BplI	GAGNNNNNCTC	2 cut(s)	758, 790
Bpu10I	CCTNAGC	1 cut(s)	1983
Bpu1102I	GCTNAGC	2 cut(s)	2561, 3484
BpuEI	CTTGAG	4 cut(s)	136, 634, 2139, 2771
BpuMI	CCSGG	3 cut(s)	24, 25, 771
Bsa29I	ATCGAT	1 cut(s)	2661
BsaBI	GATNNNNATC	1 cut(s)	2781
BsaHI	GRCGYC	1 cut(s)	3351
BsaI	GGTCTC	3 cut(s)	647, 1507, 3255
BsaJI	CCNNGG	6 cut(s)	10, 23, 24, 305, 693, 2124
BsaWI	WCCGGW	1 cut(s)	1402
BsaXI	ACNNNNNCTCC	2 cut(s)	362, 392
Bse118I	RCCGGY	1 cut(s)	1402
Bse1I	ACTGG	7 cut(s)	44, 63, 136, 357, 964, 2417, 2998
Bse21I	CCTNAGG	1 cut(s)	1518
Bse3DI	GCAATG	3 cut(s)	2307, 2376, 3302
Bse8I	GATNNNNATC	1 cut(s)	2781
BseBI	CCWGG	3 cut(s)	307, 2707, 3231
BseCI	ATCGAT	1 cut(s)	2661
BseDI	CCNNGG	6 cut(s)	10, 23, 24, 305, 693, 2124
BseGI	GGATG	9 cut(s)	121, 263, 1105, 1414, 1476, 1786, 2077, 2337, 3236
BseJI	GATNNNNATC	1 cut(s)	2781
BseMI	GCAATG	3 cut(s)	2307, 2376, 3302
BseNI	ACTGG	7 cut(s)	44, 63, 136, 357, 964, 2417, 2998
BseRI	GAGGAG	2 cut(s)	731, 2673
BseSI	GKGCMC	2 cut(s)	468, 2389
BseXI	GCAGC	8 cut(s)	1154, 2810, 2867, 3151, 3203, 3294, 3388, 3500
BsgI	GTGCAG	2 cut(s)	1224, 2109
Bsh1236I	CGCG	2 cut(s)	639, 857
BshFI	GGCC	6 cut(s)	63, 659, 1348, 1422, 1475, 1750
BshNI	GGYRCC	2 cut(s)	627, 1843
BshTI	ACCGGT	1 cut(s)	1402
BshVI	ATCGAT	1 cut(s)	2661
BsiHKAI	GWGCWC	3 cut(s)	978, 1139, 2155
BsiHKCI	CYCGRG	2 cut(s)	23, 775
BsiSI	CCGG	4 cut(s)	24, 764, 770, 1403
BslFI	GGGAC	3 cut(s)	891, 1537, 3062
BsmAI	GTCTC	8 cut(s)	382, 457, 647, 692, 1507, 1626, 3255, 3449
BsmBI	CGTCTC	1 cut(s)	382
BsmFI	GGGAC	3 cut(s)	891, 1537, 3062
BsmI	GAATGC	5 cut(s)	1360, 1984, 2885, 2905, 3485
BsnI	GGCC	6 cut(s)	63, 659, 1348, 1422, 1475, 1750
Bso31I	GGTCTC	3 cut(s)	647, 1507, 3255
BsoBI	CYCGRG	2 cut(s)	23, 775
Bsp1286I	GDGCHC	6 cut(s)	468, 776, 978, 1139, 2155, 2389
Bsp1407I	TGTACA	1 cut(s)	2523
Bsp1720I	GCTNAGC	2 cut(s)	2561, 3484
Bsp19I	CCATGG	1 cut(s)	10
BspACI	CCGC	9 cut(s)	53, 93, 639, 806, 827, 855, 989, 1911, 2898
BspANI	GGCC	6 cut(s)	63, 659, 1348, 1422, 1475, 1750
BspDI	ATCGAT	1 cut(s)	2661
BspFNI	CGCG	2 cut(s)	639, 857
BspHI	TCATGA	2 cut(s)	2674, 2686
BspLI	GGNNCC	3 cut(s)	629, 768, 1845
BspMAI	CTGCAG	2 cut(s)	1144, 2468
BspMI	ACCTGC	2 cut(s)	811, 3216
BspOI	GCTAGC	1 cut(s)	2265
BspPI	GGATC	9 cut(s)	14, 36, 317, 479, 2399, 2790, 3039, 3119, 3335
BspQI	GCTCTTC	1 cut(s)	1565
BspT107I	GGYRCC	2 cut(s)	627, 1843
BspTNI	GGTCTC	3 cut(s)	647, 1507, 3255
BsrDI	GCAATG	3 cut(s)	2307, 2376, 3302
BsrFI	RCCGGY	1 cut(s)	1402
BsrGI	TGTACA	1 cut(s)	2523
BsrI	ACTGG	7 cut(s)	44, 63, 136, 357, 964, 2417, 2998
BssAI	RCCGGY	1 cut(s)	1402
BssECI	CCNNGG	6 cut(s)	10, 23, 24, 305, 693, 2124
BssNAI	GTATAC	1 cut(s)	872
BssNI	GRCGYC	1 cut(s)	3351
BssT1I	CCWWGG	3 cut(s)	10, 693, 2124
Bst1107I	GTATAC	1 cut(s)	872
Bst2UI	CCWGG	3 cut(s)	307, 2707, 3231
Bst4CI	ACNGT	4 cut(s)	668, 703, 1276, 2201
Bst6I	CTCTTC	2 cut(s)	1565, 2211
BstACI	GRCGYC	1 cut(s)	3351
BstAUI	TGTACA	1 cut(s)	2523
BstC8I	GCNNGC	6 cut(s)	53, 512, 1437, 2004, 2263, 3007
BstDSI	CCRYGG	1 cut(s)	10
BstEII	GGTNACC	2 cut(s)	352, 1217
BstF5I	GGATG	9 cut(s)	121, 263, 1105, 1414, 1476, 1786, 2077, 2337, 3236
BstFNI	CGCG	2 cut(s)	639, 857
BstHHI	GCGC	2 cut(s)	639, 2968
BstMAI	GTCTC	8 cut(s)	382, 457, 647, 692, 1507, 1626, 3255, 3449
BstMWI	GCNNNNNNNGC	8 cut(s)	727, 824, 1538, 2008, 2096, 2663, 3148, 3365
BstNI	CCWGG	3 cut(s)	307, 2707, 3231
BstNSI	RCATGY	2 cut(s)	2015, 3026
BstPI	GGTNACC	2 cut(s)	352, 1217
BstSCI	CCNGG	6 cut(s)	22, 23, 305, 769, 2705, 3229
BstSFI	CTRYAG	4 cut(s)	984, 1140, 2464, 2575
BstSLI	GKGCMC	2 cut(s)	468, 2389
BstUI	CGCG	2 cut(s)	639, 857
BstV1I	GCAGC	8 cut(s)	1154, 2810, 2867, 3151, 3203, 3294, 3388, 3500
BstV2I	GAAGAC	5 cut(s)	1869, 2137, 2329, 2600, 2840
BstX2I	RGATCY	4 cut(s)	309, 586, 2231, 2782
BstXI	CCANNNNNNTGG	1 cut(s)	306
BstYI	RGATCY	4 cut(s)	309, 586, 2231, 2782
BstZ17I	GTATAC	1 cut(s)	872
Bsu15I	ATCGAT	1 cut(s)	2661
Bsu36I	CCTNAGG	1 cut(s)	1518
BsuI	GTATCC	1 cut(s)	1639
BsuRI	GGCC	6 cut(s)	63, 659, 1348, 1422, 1475, 1750
BsuTUI	ATCGAT	1 cut(s)	2661
BtgI	CCRYGG	1 cut(s)	10
BtgZI	GCGATG	1 cut(s)	129
BtsCI	GGATG	9 cut(s)	121, 263, 1105, 1414, 1476, 1786, 2077, 2337, 3236
BtsIMutI	CAGTG	3 cut(s)	364, 2424, 3136
BveI	ACCTGC	2 cut(s)	811, 3216
Cac8I	GCNNGC	6 cut(s)	53, 512, 1437, 2004, 2263, 3007
CciI	TCATGA	2 cut(s)	2674, 2686
CfoI	GCGC	2 cut(s)	639, 2968
Cfr10I	RCCGGY	1 cut(s)	1402
Cfr13I	GGNCC	2 cut(s)	61, 618
Cfr9I	CCCGGG	1 cut(s)	23
ClaI	ATCGAT	1 cut(s)	2661
CseI	GACGC	1 cut(s)	846
CsiI	ACCWGGT	1 cut(s)	3229
Csp6I	GTAC	7 cut(s)	100, 610, 628, 2349, 2524, 3227, 3234
CspAI	ACCGGT	1 cut(s)	1402
CspCI	CAANNNNNGTGG	4 cut(s)	2926, 2961, 3159, 3194
CviQI	GTAC	7 cut(s)	100, 610, 628, 2349, 2524, 3227, 3234
DraI	TTTAAA	2 cut(s)	1647, 3255
DraIII	CACNNNGTG	1 cut(s)	2843
Eam1104I	CTCTTC	2 cut(s)	1565, 2211
EarI	CTCTTC	2 cut(s)	1565, 2211
Ecl136II	GAGCTC	1 cut(s)	1137
Eco130I	CCWWGG	3 cut(s)	10, 693, 2124
Eco24I	GRGCYC	2 cut(s)	776, 1139
Eco31I	GGTCTC	3 cut(s)	647, 1507, 3255
Eco47I	GGWCC	1 cut(s)	618
Eco53kI	GAGCTC	1 cut(s)	1137
Eco57I	CTGAAG	5 cut(s)	1020, 1056, 1472, 2323, 2852
Eco81I	CCTNAGG	1 cut(s)	1518
Eco88I	CYCGRG	2 cut(s)	23, 775
Eco91I	GGTNACC	2 cut(s)	352, 1217
EcoICRI	GAGCTC	1 cut(s)	1137
EcoO65I	GGTNACC	2 cut(s)	352, 1217
EcoRII	CCWGG	3 cut(s)	305, 2705, 3229
EcoT14I	CCWWGG	3 cut(s)	10, 693, 2124
EcoT38I	GRGCYC	2 cut(s)	776, 1139
ErhI	CCWWGG	3 cut(s)	10, 693, 2124
Esp3I	CGTCTC	1 cut(s)	382
FalI	AAGNNNNNCTT	2 cut(s)	2335, 2367
FaqI	GGGAC	3 cut(s)	891, 1537, 3062
FauI	CCCGC	2 cut(s)	60, 799
FauNDI	CATATG	1 cut(s)	3445
FblI	GTMKAC	1 cut(s)	871
Fnu4HI	GCNGC	9 cut(s)	828, 1143, 2824, 2856, 3140, 3192, 3308, 3402, 3489
FokI	GGATG	9 cut(s)	108, 250, 1112, 1421, 1483, 1793, 2084, 2344, 3223
FriOI	GRGCYC	2 cut(s)	776, 1139
Fsp4HI	GCNGC	9 cut(s)	828, 1143, 2824, 2856, 3140, 3192, 3308, 3402, 3489
FspBI	CTAG	3 cut(s)	1188, 1871, 2262
GlaI	GCGC	2 cut(s)	638, 2967
GluI	GCNGC	9 cut(s)	828, 1143, 2824, 2856, 3140, 3192, 3308, 3402, 3489
HaeIII	GGCC	6 cut(s)	63, 659, 1348, 1422, 1475, 1750
HapII	CCGG	4 cut(s)	24, 764, 770, 1403
HgaI	GACGC	1 cut(s)	846
HhaI	GCGC	2 cut(s)	639, 2968
Hin1I	GRCGYC	1 cut(s)	3351
Hin6I	GCGC	2 cut(s)	637, 2966
HinP1I	GCGC	2 cut(s)	637, 2966
HindIII	AAGCTT	2 cut(s)	1484, 2502
HpaII	CCGG	4 cut(s)	24, 764, 770, 1403
HphI	GGTGA	8 cut(s)	276, 393, 435, 680, 1006, 1088, 1229, 1796
Hpy166II	GTNNAC	4 cut(s)	409, 872, 1369, 2422
Hpy8I	GTNNAC	4 cut(s)	409, 872, 1369, 2422
Hpy99I	CGWCG	3 cut(s)	76, 85, 1384
HpyAV	CCTTC	9 cut(s)	119, 123, 180, 228, 327, 1031, 1100, 1307, 2712
HpyCH4III	ACNGT	4 cut(s)	668, 703, 1276, 2201
HpyCH4IV	ACGT	4 cut(s)	129, 1379, 2842, 3351
HpyF10VI	GCNNNNNNNGC	8 cut(s)	727, 824, 1538, 2008, 2096, 2663, 3148, 3365
HpySE526I	ACGT	4 cut(s)	129, 1379, 2842, 3351
Hsp92I	GRCGYC	1 cut(s)	3351
HspAI	GCGC	2 cut(s)	637, 2966
KpnI	GGTACC	1 cut(s)	631
LguI	GCTCTTC	1 cut(s)	1565
LmnI	GCTCC	8 cut(s)	424, 597, 718, 766, 1134, 1432, 1619, 1736
Lsp1109I	GCAGC	8 cut(s)	1154, 2810, 2867, 3151, 3203, 3294, 3388, 3500
LweI	GCATC	3 cut(s)	2652, 2653, 2842
MabI	ACCWGGT	1 cut(s)	3229
MaeI	CTAG	3 cut(s)	1188, 1871, 2262
MaeII	ACGT	4 cut(s)	129, 1379, 2842, 3351
MfeI	CAATTG	5 cut(s)	1556, 1884, 3270, 3375, 3383
MflI	RGATCY	4 cut(s)	309, 586, 2231, 2782
MhlI	GDGCHC	6 cut(s)	468, 776, 978, 1139, 2155, 2389
MlyI	GAGTC	9 cut(s)	85, 546, 787, 1187, 1559, 1600, 1883, 2189, 2631
MmeI	TCCRAC	7 cut(s)	95, 104, 211, 455, 1362, 1714, 1752
MroXI	GAANNNNTTC	1 cut(s)	2756
MseI	TTAA	9 cut(s)	953, 1013, 1493, 1646, 1698, 1857, 2721, 2961, 3254
MslI	CAYNNNNRTG	5 cut(s)	15, 339, 461, 1829, 2973
MspA1I	CMGCKG	3 cut(s)	93, 827, 989
MspI	CCGG	4 cut(s)	24, 764, 770, 1403
MspR9I	CCNGG	6 cut(s)	24, 25, 307, 771, 2707, 3231
MunI	CAATTG	5 cut(s)	1556, 1884, 3270, 3375, 3383
Mva1269I	GAATGC	5 cut(s)	1360, 1984, 2885, 2905, 3485
MvaI	CCWGG	3 cut(s)	307, 2707, 3231
MvnI	CGCG	2 cut(s)	639, 857
MwoI	GCNNNNNNNGC	8 cut(s)	727, 824, 1538, 2008, 2096, 2663, 3148, 3365
NciI	CCSGG	3 cut(s)	24, 25, 771
NcoI	CCATGG	1 cut(s)	10
NdeI	CATATG	1 cut(s)	3445
NheI	GCTAGC	1 cut(s)	2261
NlaIV	GGNNCC	3 cut(s)	629, 768, 1845
NmuCI	GTSAC	8 cut(s)	441, 683, 795, 994, 1217, 2031, 2632, 2668
NspI	RCATGY	2 cut(s)	2015, 3026
OliI	CACNNNNGTG	1 cut(s)	461
PaeR7I	CTCGAG	1 cut(s)	775
PagI	TCATGA	2 cut(s)	2674, 2686
PciI	ACATGT	1 cut(s)	3022
PciSI	GCTCTTC	1 cut(s)	1565
PctI	GAATGC	5 cut(s)	1360, 1984, 2885, 2905, 3485
PdmI	GAANNNNTTC	1 cut(s)	2756
PfeI	GAWTC	6 cut(s)	290, 1244, 2062, 2601, 2678, 2752
PflMI	CCANNNNNTGG	3 cut(s)	1582, 2072, 3272
PfoI	TCCNGGA	1 cut(s)	2705
PinAI	ACCGGT	1 cut(s)	1402
PkrI	GCNGC	9 cut(s)	829, 1144, 2825, 2857, 3141, 3193, 3309, 3403, 3490
PleI	GAGTC	9 cut(s)	84, 545, 786, 1186, 1558, 1600, 1882, 2188, 2630
PpsI	GAGTC	9 cut(s)	84, 545, 786, 1186, 1558, 1600, 1882, 2188, 2630
PscI	ACATGT	1 cut(s)	3022
PsiI	TTATAA	1 cut(s)	1236
Psp124BI	GAGCTC	1 cut(s)	1139
Psp6I	CCWGG	3 cut(s)	305, 2705, 3229
PspEI	GGTNACC	2 cut(s)	352, 1217
PspGI	CCWGG	3 cut(s)	305, 2705, 3229
PspN4I	GGNNCC	3 cut(s)	629, 768, 1845
PspPI	GGNCC	2 cut(s)	61, 618
PspXI	VCTCGAGB	1 cut(s)	775
PstI	CTGCAG	2 cut(s)	1144, 2468
PsuI	RGATCY	4 cut(s)	309, 586, 2231, 2782
RsaI	GTAC	7 cut(s)	101, 611, 629, 2350, 2525, 3228, 3235
RsaNI	GTAC	7 cut(s)	100, 610, 628, 2349, 2524, 3227, 3234
RseI	CAYNNNNRTG	5 cut(s)	15, 339, 461, 1829, 2973
SacI	GAGCTC	1 cut(s)	1139
SapI	GCTCTTC	1 cut(s)	1565
SaqAI	TTAA	9 cut(s)	953, 1013, 1493, 1646, 1698, 1857, 2721, 2961, 3254
SatI	GCNGC	9 cut(s)	828, 1143, 2824, 2856, 3140, 3192, 3308, 3402, 3489
Sau96I	GGNCC	2 cut(s)	61, 618
ScaI	AGTACT	2 cut(s)	611, 2350
SchI	GAGTC	9 cut(s)	85, 546, 787, 1187, 1559, 1600, 1883, 2189, 2631
ScrFI	CCNGG	6 cut(s)	24, 25, 307, 771, 2707, 3231
SduI	GDGCHC	6 cut(s)	468, 776, 978, 1139, 2155, 2389
SexAI	ACCWGGT	1 cut(s)	3229
SfaNI	GCATC	3 cut(s)	2652, 2653, 2842
SfcI	CTRYAG	4 cut(s)	984, 1140, 2464, 2575
Sfr274I	CTCGAG	1 cut(s)	775
SinI	GGWCC	1 cut(s)	618
SlaI	CTCGAG	1 cut(s)	775
SmaI	CCCGGG	1 cut(s)	25
SmiMI	CAYNNNNRTG	5 cut(s)	15, 339, 461, 1829, 2973
SmlI	CTYRAG	5 cut(s)	151, 613, 775, 2154, 2786
SmoI	CTYRAG	5 cut(s)	151, 613, 775, 2154, 2786
SpeI	ACTAGT	1 cut(s)	1187
SsiI	CCGC	9 cut(s)	53, 93, 639, 806, 827, 855, 989, 1911, 2898
SspI	AATATT	1 cut(s)	2548
SspMI	CTAG	3 cut(s)	1188, 1871, 2262
SstI	GAGCTC	1 cut(s)	1139
StyD4I	CCNGG	6 cut(s)	22, 23, 305, 769, 2705, 3229
StyI	CCWWGG	3 cut(s)	10, 693, 2124
TaaI	ACNGT	4 cut(s)	668, 703, 1276, 2201
TaiI	ACGT	4 cut(s)	132, 1382, 2845, 3354
TaqI	TCGA	7 cut(s)	535, 776, 863, 1181, 1462, 1798, 2661
TatI	WGTACW	3 cut(s)	609, 2348, 2523
TauI	GCSGC	1 cut(s)	830
TfiI	GAWTC	6 cut(s)	290, 1244, 2062, 2601, 2678, 2752
Tru1I	TTAA	9 cut(s)	953, 1013, 1493, 1646, 1698, 1857, 2721, 2961, 3254
Tru9I	TTAA	9 cut(s)	953, 1013, 1493, 1646, 1698, 1857, 2721, 2961, 3254
TscAI	CASTG	3 cut(s)	364, 2424, 3136
TseFI	GTSAC	8 cut(s)	441, 683, 795, 994, 1217, 2031, 2632, 2668
TseI	GCWGC	8 cut(s)	1142, 2823, 2855, 3139, 3191, 3307, 3401, 3488
Tsp45I	GTSAC	8 cut(s)	441, 683, 795, 994, 1217, 2031, 2632, 2668
TspGWI	ACGGA	5 cut(s)	411, 584, 889, 2881, 3273
TspMI	CCCGGG	1 cut(s)	23
TspRI	CASTG	3 cut(s)	364, 2424, 3136
Van91I	CCANNNNNTGG	3 cut(s)	1582, 2072, 3272
VpaK11BI	GGWCC	1 cut(s)	618
XapI	RAATTY	6 cut(s)	1642, 1743, 1940, 2361, 3083, 3287
XceI	RCATGY	2 cut(s)	2015, 3026
XcmI	CCANNNNNNNNNTGG	1 cut(s)	988
XhoI	CTCGAG	1 cut(s)	775
XmaI	CCCGGG	1 cut(s)	23
XmiI	GTMKAC	1 cut(s)	871
XmnI	GAANNNNTTC	1 cut(s)	2756
XspI	CTAG	3 cut(s)	1188, 1871, 2262
ZraI	GACGTC	1 cut(s)	3352
ZrmI	AGTACT	2 cut(s)	611, 2350

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.