Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008115.1

Orthogroup ID

OG0001453

Physical Location & Seq

Genomic Coordinates Reverse (-)

55434 .. 59322

Gene Structure 3889 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008115.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3453 bp

atgaatcctttaattccaacctttcagtcaccctcagtccccacttttgtgccccaacccaaatttacagatcccatacctgcatcttctatttgttcaatgggtaactgtgagcccctagctctaatcacgggtcggatccgaaccatatcctcttccttttcttcatcatctgacccacaaacccacgaagatacaacaaacccatcttctctgctgccactttctgatgttcccgtgcagaaggcggttctccgcttcgagaagcttcaccaccaacccctctccattactgtcgcaggggaggtcagccttgcgggcgaagcggccacttctgaccaccaccaagcgaagcaggatgagggacaggatgacttgatgagaaatgacaacgaagatgaattcgcacaagtagatgaggagagtagagaaagagaacagaacttggggcatagccaagttgaagagatgagtgtccatatttccggcactgtgatgcgtgatgggctccgtggcgtgccggctattcggtcgtcaggaaattcgatgctggctaacgacgaggaactggaacacgatagtgatgtgggagcccatgtgtctgattccgaattggagcaagactcggaagagaaaggagatgtgagattgactaaaccctcccagaattctacatacaacaaaagaggtctgctagagaagctcagagatatgagttggactgagaatgctaaatgggtggacaagcttacgtcggatattgagcaagagcaaccggtggatgtgcatgatgacctgacaagggagcttgcattttatacacaggctctaaatcgaatgaggatggcctttgagaagcttcagtttatggggcttccatttctgagacctgaggactactatgcagaaatggtgaagtccgagtcccaattggggaaagtgaagagccaatttttggtggaaatgactaccaatcttactcaaacctctttgtctcaggtatccactactctgaatttaaattttcaagatgttagaagatcttttgagagttttttgtccaatgtgattaagctctataatcttagttccttgaactgtaaagttggagcagaaatttggcctcctgatgatggggaatggttgaatttggatggtgaaacctattgtcgagttgttagaggatttcttgataacaaacatgtgaaagagttggcaattttgattattaaagctcagaagctagagtcgtctacaattgtggttgatagatcatgttgttgcggtattgttgttgcttgtgttggtactgaattttcagataaagaacacaatattcttgatgaattgcatgctcagggaggtattttggggcgtgatgtgcatgtgcttttcaagtctatgttacaattcaatgatattgactttctcttgaatccatctgatggaaatagggattgtgcagttgtggcagttgataagattgttccttgtaccaagggaaaacgatctcattttatatgtgctcaagttgagaatataaatgagcaggagtcaaaggaactttggaacagttttctttgtcaagaagagtatgatatgagatctaaagaagatttagatgaagttgaagctagcagattccacaagcatatcaacagcgtattacaagtgactaaaagcatcttgcagtctgccgtcgatgctgtcactcatgattctcctcgtgaaattgacattccttcctggaaagaggtatttaattcattggttttgcttgaaaaaaatctgaatcaattccatgatttttgtgttgatagggatctcaagaatatatgggaagcattttctgtctatctctgccgccaattgaagacacaacgtgttaatgatgcagccaacaaattgatgacacaaaatatggcattcattgtgtgtggtgtgcattctttgataggacaaatagagtgtgtagattctttgtcaagtatattgggtgtttgtgccaaaggatgtggcaagtttggtgttaagggtcatagtgatgggagaactttttacgcttatcagtttgcctgcattagtgttcaacatgttgtggatcaaattattgagatgtcaaacacaggtggtggaaatataaatgtcccaacattcaaaatttttgcttcacatcttgggatcacaactttctctgtcagtgctttgcagcaatttgggcatgatagtctgagccaaccaattatggtggaagtctacgcagcaccagagattggcctgcatgatatattccttgtacctgatgtcaaggctgttgttgcagcagcaactattcaattgcaattaaatgaagctattgagttatacaagggaatggacaaacttcttcgagcttttgagatatatatagcctttgatcatctggcctgccatctttgctcaattggtccacaacttttaattgagcaattctttgatattgcattcattgtgaatttttatgatacaaatgttggtcagtggctccctgctcatgatgaaagatccatttgcgaaggtataaagagaatcagtagaaggttacttacattgcttacccttcatcacttcaataataagatggtccaacaattcagttacctgcagatagttctgaagaaactcattcaggcagaactgcaagtttctagtttccgatcttggatattatctagctgctattgcaagtgcaactcgattctccctgtagttttaattgtggatgcttctgaacagattcaacaaaatgtcatcaggattgtcttgtacagtttgtttgtctcacacgctgtgctggcacaagaactcatagttgaggataatacaaagcaggttggtactgcatggacatttgaaagcattgacatatttactgggcctgtcaatatgttcaacgatgaatgggggcatcctaccagtaagttagactgtatgatccttatattggaaattgccaagagctgttatgaacttcaaaacacctttgccaatgtcaaaatgggtatgatgacagcgtcctacacctccaatgacaaacttggtgtgcatgaggccacaaagatgaccacacttgttgataaagacaacggctcatttcatcaatggcatatcacatttttcatctccgactttgagcttgtccatcatctcttcatttttgagtactgctggtataacacttttggggttgcttttgacaatacgatggttgtccagctggtctgcataattgattatgctcttggaacttcactccatgcttttgacaggtattgggataaaatcttcttgctgttggcaatatctacagttctggaccctcagatgtcaaagataatttttggtgacgtagatgatgaagcagggacaagttttggaagacaactcaggcttgaggtcaagcctattctttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0003924 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0022613 GO:0030684 GO:0030687 GO:0031974 GO:0031981 GO:0032991 GO:0034399 GO:0034470 GO:0034641 GO:0034660 GO:0042254 GO:0042273 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ebp2

Protein Analysis

1150

Amino Acids

129.61

Weight (kDa)

5.06

Isoelectric Point (pI)

43.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001453)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G22660
fragaria_vesca	FvH4_3g44241 FvH4_7g28160 FvH4_7g28160 FvH4_7g28160
malus_domestica	MD01G1185600.v1.1 MD07G1257700.v1.1
prunus_persica	Prupe.2G115300_v2.0.a1 Prupe.2G115400_v2.0.a1 Prupe.2G282000_v2.0.a1
pyrus_communis	pycom01g19720 pycom07g23070
rosa_chinensis	RchiOBHm_Chr1g0375101
rosa_laevigata	RLG00000000704 RLG00000019704 RLG00000019707 RLG00000026687 RLG00000029116
rosa_multiflora	Rmu_co8059840.1_g000001 Rmu_co8133218.1_g000001 Rmu_sc0000554.1_g000018 Rmu_sc0000665.1_g000018 Rmu_sc0001371.1_g000022 Rmu_sc0002268.1_g000036 Rmu_sc0003129.1_g000005 Rmu_sc0003710.1_g000012 Rmu_sc0005008.1_g000027 Rmu_sc0005278.1_g000015 Rmu_sc0005454.1_g000013 Rmu_sc0005454.1_g000014 Rmu_sc0006754.1_g000009 Rmu_sc0007581.1_g000002 Rmu_sc0008115.1_g000013 Rmu_sc0010589.1_g000001 Rmu_sc0013545.1_g000008 Rmu_sc0028055.1_g000001 Rmu_sc0032109.1_g000001 Rmu_ssc0000434.1_g000059
rosa_roxburghii	Rroxscaffold_3G00223090 Rroxscaffold_6G00388940 Rroxscaffold_7G00205890
rosa_rugosa	Rorug01G0388500 Rorug06G0420000
rosa_samantha	Rh1AG248100 Rh1AG398900 Rh1BG107200 Rh1BG365600 Rh1CG378500 Rh1DG396300 Rh4AG140200 Rh7BG018600
rosa_wichuraiana	Rw1G035420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	3 cut(s)	88, 2649, 2860
AccB7I	CCANNNNNTGG	3 cut(s)	955, 1445, 2273
AccI	GTMKAC	2 cut(s)	1253, 2256
AciI	CCGC	6 cut(s)	248, 256, 317, 326, 1284, 1864
AclWI	GGATC	8 cut(s)	65, 133, 146, 1830, 2109, 2189, 2538, 2968
AcoI	YGGCCR	1 cut(s)	327
AcuI	CTGAAG	2 cut(s)	845, 2675
AdeI	CACNNNGTG	2 cut(s)	1883, 2830
AfaI	GTAC	6 cut(s)	1309, 1495, 2298, 2807, 2878, 3203
AfiI	CCNNNNNNNGG	7 cut(s)	802, 933, 955, 1133, 1445, 2273, 2983
AflIII	ACRYGT	3 cut(s)	1201, 1882, 2092
AgeI	ACCGGT	1 cut(s)	775
AjnI	CCWGG	1 cut(s)	1745
AleI	CACNNNNGTG	2 cut(s)	47, 579
Alw21I	GWGCWC	1 cut(s)	1528
Alw26I	GTCTC	3 cut(s)	880, 999, 2824
AlwI	GGATC	8 cut(s)	65, 133, 146, 1830, 2109, 2189, 2538, 2968
AoxI	GGCC	7 cut(s)	327, 846, 1121, 2275, 2424, 2915, 3090
ApeKI	GCWGC	7 cut(s)	217, 1895, 2209, 2261, 2321, 2324, 2715
AsiGI	ACCGGT	1 cut(s)	775
Asp700I	GAANNNNTTC	2 cut(s)	1796, 2775
AspS9I	GGNCC	4 cut(s)	2447, 2623, 2915, 3355
AsuHPI	GGTGA	5 cut(s)	21, 263, 925, 1169, 3395
AsuNHI	GCTAGC	1 cut(s)	1634
AvaII	GGWCC	3 cut(s)	2447, 2623, 3355
AxyI	CCTNAGG	1 cut(s)	891
BaeGI	GKGCMC	1 cut(s)	54
BaeI	ACNNNNGTAYC	2 cut(s)	2496, 2529
BamHI	GGATCC	1 cut(s)	138
BanII	GRGCYC	3 cut(s)	117, 510, 595
BarI	GAAGNNNNNNTAC	2 cut(s)	2569, 2601
BauI	CACGAG	1 cut(s)	1725
BbsI	GAAGAC	2 cut(s)	1880, 3424
Bbv12I	GWGCWC	1 cut(s)	1528
BbvI	GCAGC	7 cut(s)	204, 1907, 2221, 2273, 2333, 2336, 2702
BceAI	ACGGC	2 cut(s)	1682, 3142
BciT130I	CCWGG	1 cut(s)	1747
BciVI	GTATCC	1 cut(s)	1012
BclI	TGATCA	1 cut(s)	2416
BcoDI	GTCTC	3 cut(s)	880, 999, 2824
BfaI	CTAG	6 cut(s)	119, 695, 1244, 1635, 2688, 2712
BfmI	CTRYAG	3 cut(s)	2642, 2745, 3345
BfuAI	ACCTGC	3 cut(s)	88, 2649, 2860
BfuI	GTATCC	1 cut(s)	1012
BglI	GCCNNNNNGGC	1 cut(s)	318
BglII	AGATCT	2 cut(s)	1040, 1604
BisI	GCNGC	9 cut(s)	218, 327, 1864, 1896, 2210, 2262, 2322, 2325, 2716
BlsI	GCNGC	9 cut(s)	219, 328, 1865, 1897, 2211, 2263, 2323, 2326, 2717
BmcAI	AGTACT	1 cut(s)	3203
Bme1390I	CCNGG	1 cut(s)	1747
Bme18I	GGWCC	3 cut(s)	2447, 2623, 3355
BmgT120I	GGNCC	4 cut(s)	2447, 2623, 2915, 3355
BmiI	GGNNCC	5 cut(s)	140, 509, 592, 2525, 3357
BmrFI	CCNGG	1 cut(s)	1747
BmrI	ACTGGG	1 cut(s)	2922
BmsI	GCATC	8 cut(s)	92, 486, 537, 1692, 1693, 1882, 2752, 2956
BmtI	GCTAGC	1 cut(s)	1638
BmuI	ACTGGG	1 cut(s)	2922
BpiI	GAAGAC	2 cut(s)	1880, 3424
BplI	GAGNNNNNCTC	2 cut(s)	608, 640
Bpu10I	CCTNAGC	1 cut(s)	1356
BpuEI	CTTGAG	3 cut(s)	1512, 1811, 3452
BsaBI	GATNNNNATC	1 cut(s)	1821
BsaI	GGTCTC	1 cut(s)	880
BsaJI	CCNNGG	2 cut(s)	511, 1497
BsaWI	WCCGGW	1 cut(s)	775
BsaXI	ACNNNNNCTCC	2 cut(s)	582, 612
Bsc4I	CCNNNNNNNGG	7 cut(s)	802, 933, 955, 1133, 1445, 2273, 2983
Bse118I	RCCGGY	2 cut(s)	520, 775
Bse1I	ACTGG	3 cut(s)	573, 2917, 2955
Bse21I	CCTNAGG	1 cut(s)	891
Bse3DI	GCAATG	1 cut(s)	2588
Bse8I	GATNNNNATC	1 cut(s)	1821
BseBI	CCWGG	1 cut(s)	1747
BseDI	CCNNGG	2 cut(s)	511, 1497
BseGI	GGATG	8 cut(s)	364, 376, 787, 849, 1159, 2018, 2767, 2947
BseJI	GATNNNNATC	1 cut(s)	1821
BseLI	CCNNNNNNNGG	7 cut(s)	802, 933, 955, 1133, 1445, 2273, 2983
BseMI	GCAATG	1 cut(s)	2588
BseNI	ACTGG	3 cut(s)	573, 2917, 2955
BseRI	GAGGAG	2 cut(s)	434, 1713
BseSI	GKGCMC	1 cut(s)	54
BseXI	GCAGC	7 cut(s)	204, 1907, 2221, 2273, 2333, 2336, 2702
BsgI	GTGCAG	2 cut(s)	260, 1482
Bsh1285I	CGRYCG	1 cut(s)	533
BshFI	GGCC	7 cut(s)	329, 848, 1123, 2277, 2426, 2917, 3092
BshTI	ACCGGT	1 cut(s)	775
BsiEI	CGRYCG	1 cut(s)	533
BsiHKAI	GWGCWC	1 cut(s)	1528
BsiSI	CCGG	3 cut(s)	486, 521, 776
BslFI	GGGAC	5 cut(s)	23, 378, 910, 2132, 3418
BslI	CCNNNNNNNGG	7 cut(s)	802, 933, 955, 1133, 1445, 2273, 2983
BsmAI	GTCTC	3 cut(s)	880, 999, 2824
BsmFI	GGGAC	5 cut(s)	23, 378, 910, 2132, 3418
BsmI	GAATGC	4 cut(s)	733, 1925, 1945, 2483
BsnI	GGCC	7 cut(s)	329, 848, 1123, 2277, 2426, 2917, 3092
Bso31I	GGTCTC	1 cut(s)	880
Bsp1286I	GDGCHC	5 cut(s)	54, 117, 510, 595, 1528
Bsp1407I	TGTACA	1 cut(s)	2805
BspACI	CCGC	6 cut(s)	248, 256, 317, 326, 1284, 1864
BspANI	GGCC	7 cut(s)	329, 848, 1123, 2277, 2426, 2917, 3092
BspHI	TCATGA	2 cut(s)	1714, 2533
BspLI	GGNNCC	5 cut(s)	140, 509, 592, 2525, 3357
BspMAI	CTGCAG	1 cut(s)	2646
BspMI	ACCTGC	3 cut(s)	88, 2649, 2860
BspOI	GCTAGC	1 cut(s)	1638
BspPI	GGATC	8 cut(s)	65, 133, 146, 1830, 2109, 2189, 2538, 2968
BspQI	GCTCTTC	1 cut(s)	938
BspTNI	GGTCTC	1 cut(s)	880
BsrDI	GCAATG	1 cut(s)	2588
BsrFI	RCCGGY	2 cut(s)	520, 775
BsrGI	TGTACA	1 cut(s)	2805
BsrI	ACTGG	3 cut(s)	573, 2917, 2955
BssAI	RCCGGY	2 cut(s)	520, 775
BssECI	CCNNGG	2 cut(s)	511, 1497
BssSI	CACGAG	1 cut(s)	1725
BssT1I	CCWWGG	1 cut(s)	1497
Bst2BI	CACGAG	1 cut(s)	1725
Bst2UI	CCWGG	1 cut(s)	1747
Bst4CI	ACNGT	8 cut(s)	110, 295, 493, 1100, 1574, 2810, 2969, 3349
Bst6I	CTCTTC	6 cut(s)	160, 459, 624, 938, 1584, 3194
BstAUI	TGTACA	1 cut(s)	2805
BstDSI	CCRYGG	1 cut(s)	511
BstF5I	GGATG	8 cut(s)	364, 376, 787, 849, 1159, 2018, 2767, 2947
BstMAI	GTCTC	3 cut(s)	880, 999, 2824
BstMCI	CGRYCG	1 cut(s)	533
BstNI	CCWGG	1 cut(s)	1747
BstNSI	RCATGY	4 cut(s)	1205, 1355, 1388, 2096
BstSCI	CCNGG	1 cut(s)	1745
BstSFI	CTRYAG	3 cut(s)	2642, 2745, 3345
BstSLI	GKGCMC	1 cut(s)	54
BstV1I	GCAGC	7 cut(s)	204, 1907, 2221, 2273, 2333, 2336, 2702
BstV2I	GAAGAC	2 cut(s)	1880, 3424
BstX2I	RGATCY	6 cut(s)	70, 138, 1040, 1604, 1822, 2543
BstYI	RGATCY	6 cut(s)	70, 138, 1040, 1604, 1822, 2543
Bsu36I	CCTNAGG	1 cut(s)	891
BsuI	GTATCC	1 cut(s)	1012
BsuRI	GGCC	7 cut(s)	329, 848, 1123, 2277, 2426, 2917, 3092
BtgI	CCRYGG	1 cut(s)	511
BtsCI	GGATG	8 cut(s)	364, 376, 787, 849, 1159, 2018, 2767, 2947
BtsIMutI	CAGTG	3 cut(s)	489, 2206, 2525
BveI	ACCTGC	3 cut(s)	88, 2649, 2860
CciI	TCATGA	2 cut(s)	1714, 2533
Cfr10I	RCCGGY	2 cut(s)	520, 775
Cfr13I	GGNCC	4 cut(s)	2447, 2623, 2915, 3355
CseI	GACGC	1 cut(s)	3042
Csp6I	GTAC	6 cut(s)	1308, 1494, 2297, 2806, 2877, 3202
CspAI	ACCGGT	1 cut(s)	775
CspCI	CAANNNNNGTGG	6 cut(s)	1996, 2031, 2229, 2264, 3094, 3129
CviQI	GTAC	6 cut(s)	1308, 1494, 2297, 2806, 2877, 3202
DraI	TTTAAA	1 cut(s)	1020
DraIII	CACNNNGTG	2 cut(s)	1883, 2830
EaeI	YGGCCR	1 cut(s)	327
Eam1104I	CTCTTC	6 cut(s)	160, 459, 624, 938, 1584, 3194
EarI	CTCTTC	6 cut(s)	160, 459, 624, 938, 1584, 3194
Eco130I	CCWWGG	1 cut(s)	1497
Eco24I	GRGCYC	3 cut(s)	117, 510, 595
Eco31I	GGTCTC	1 cut(s)	880
Eco47I	GGWCC	3 cut(s)	2447, 2623, 3355
Eco57I	CTGAAG	2 cut(s)	845, 2675
Eco81I	CCTNAGG	1 cut(s)	891
EcoRI	GAATTC	2 cut(s)	401, 667
EcoRII	CCWGG	1 cut(s)	1745
EcoT14I	CCWWGG	1 cut(s)	1497
EcoT38I	GRGCYC	3 cut(s)	117, 510, 595
ErhI	CCWWGG	1 cut(s)	1497
FaqI	GGGAC	5 cut(s)	23, 378, 910, 2132, 3418
FauI	CCCGC	1 cut(s)	310
FbaI	TGATCA	1 cut(s)	2416
FblI	GTMKAC	2 cut(s)	1253, 2256
Fnu4HI	GCNGC	9 cut(s)	218, 327, 1864, 1896, 2210, 2262, 2322, 2325, 2716
FokI	GGATG	8 cut(s)	371, 383, 794, 856, 1166, 2025, 2774, 2934
FriOI	GRGCYC	3 cut(s)	117, 510, 595
Fsp4HI	GCNGC	9 cut(s)	218, 327, 1864, 1896, 2210, 2262, 2322, 2325, 2716
FspBI	CTAG	6 cut(s)	119, 695, 1244, 1635, 2688, 2712
GluI	GCNGC	9 cut(s)	218, 327, 1864, 1896, 2210, 2262, 2322, 2325, 2716
HaeIII	GGCC	7 cut(s)	329, 848, 1123, 2277, 2426, 2917, 3092
HapII	CCGG	3 cut(s)	486, 521, 776
HgaI	GACGC	1 cut(s)	3042
HindIII	AAGCTT	3 cut(s)	266, 746, 857
HpaII	CCGG	3 cut(s)	486, 521, 776
HphI	GGTGA	5 cut(s)	21, 263, 925, 1169, 3395
Hpy166II	GTNNAC	4 cut(s)	742, 1254, 2257, 2450
Hpy8I	GTNNAC	4 cut(s)	742, 1254, 2257, 2450
Hpy99I	CGWCG	3 cut(s)	563, 757, 1703
HpyAV	CCTTC	5 cut(s)	238, 1752, 2549, 2571, 2609
HpyCH4III	ACNGT	8 cut(s)	110, 295, 493, 1100, 1574, 2810, 2969, 3349
HpyCH4IV	ACGT	3 cut(s)	752, 1882, 3387
HpySE526I	ACGT	3 cut(s)	752, 1882, 3387
KroI	GCCGGC	1 cut(s)	520
KroNI	GCCGGC	1 cut(s)	522
Ksp22I	TGATCA	1 cut(s)	2416
LguI	GCTCTTC	1 cut(s)	938
LmnI	GCTCC	6 cut(s)	513, 590, 616, 805, 1109, 2529
Lsp1109I	GCAGC	7 cut(s)	204, 1907, 2221, 2273, 2333, 2336, 2702
LweI	GCATC	8 cut(s)	92, 486, 537, 1692, 1693, 1882, 2752, 2956
MaeI	CTAG	6 cut(s)	119, 695, 1244, 1635, 2688, 2712
MaeII	ACGT	3 cut(s)	752, 1882, 3387
MaeIII	GTNAC	8 cut(s)	27, 104, 1404, 1672, 1708, 2580, 2636, 3383
MfeI	CAATTG	5 cut(s)	929, 1257, 1868, 2336, 2442
MflI	RGATCY	6 cut(s)	70, 138, 1040, 1604, 1822, 2543
MhlI	GDGCHC	5 cut(s)	54, 117, 510, 595, 1528
MlyI	GAGTC	4 cut(s)	617, 932, 1256, 1562
MmeI	TCCRAC	7 cut(s)	41, 116, 698, 735, 1087, 2650, 3189
MroNI	GCCGGC	1 cut(s)	520
MroXI	GAANNNNTTC	2 cut(s)	1796, 2775
MslI	CAYNNNNRTG	5 cut(s)	47, 494, 579, 2043, 3098
MspA1I	CMGCKG	1 cut(s)	3256
MspI	CCGG	3 cut(s)	486, 521, 776
MspR9I	CCNGG	1 cut(s)	1747
MunI	CAATTG	5 cut(s)	929, 1257, 1868, 2336, 2442
Mva1269I	GAATGC	4 cut(s)	733, 1925, 1945, 2483
MvaI	CCWGG	1 cut(s)	1747
NaeI	GCCGGC	1 cut(s)	522
NgoMIV	GCCGGC	1 cut(s)	520
NheI	GCTAGC	1 cut(s)	1634
NlaIV	GGNNCC	5 cut(s)	140, 509, 592, 2525, 3357
NmuCI	GTSAC	4 cut(s)	27, 1672, 1708, 3383
NspI	RCATGY	4 cut(s)	1205, 1355, 1388, 2096
OliI	CACNNNNGTG	2 cut(s)	47, 579
PaeI	GCATGC	1 cut(s)	1355
PagI	TCATGA	2 cut(s)	1714, 2533
PciI	ACATGT	2 cut(s)	1201, 2092
PciSI	GCTCTTC	1 cut(s)	938
PctI	GAATGC	4 cut(s)	733, 1925, 1945, 2483
PdiI	GCCGGC	1 cut(s)	522
PdmI	GAANNNNTTC	2 cut(s)	1796, 2775
PflFI	GACNNNGTC	1 cut(s)	3052
PflMI	CCANNNNNTGG	3 cut(s)	955, 1445, 2273
PfoI	TCCNGGA	1 cut(s)	1745
PinAI	ACCGGT	1 cut(s)	775
PkrI	GCNGC	9 cut(s)	219, 328, 1865, 1897, 2211, 2263, 2323, 2326, 2717
PleI	GAGTC	4 cut(s)	617, 931, 1255, 1561
PpsI	GAGTC	4 cut(s)	617, 931, 1255, 1561
PscI	ACATGT	2 cut(s)	1201, 2092
Psp6I	CCWGG	1 cut(s)	1745
PspGI	CCWGG	1 cut(s)	1745
PspN4I	GGNNCC	5 cut(s)	140, 509, 592, 2525, 3357
PspPI	GGNCC	4 cut(s)	2447, 2623, 2915, 3355
PstI	CTGCAG	1 cut(s)	2646
PsuI	RGATCY	6 cut(s)	70, 138, 1040, 1604, 1822, 2543
PsyI	GACNNNGTC	1 cut(s)	3052
PvuII	CAGCTG	1 cut(s)	3256
RsaI	GTAC	6 cut(s)	1309, 1495, 2298, 2807, 2878, 3203
RsaNI	GTAC	6 cut(s)	1308, 1494, 2297, 2806, 2877, 3202
RseI	CAYNNNNRTG	5 cut(s)	47, 494, 579, 2043, 3098
SapI	GCTCTTC	1 cut(s)	938
SatI	GCNGC	9 cut(s)	218, 327, 1864, 1896, 2210, 2262, 2322, 2325, 2716
Sau96I	GGNCC	4 cut(s)	2447, 2623, 2915, 3355
ScaI	AGTACT	1 cut(s)	3203
SchI	GAGTC	4 cut(s)	617, 932, 1256, 1562
ScrFI	CCNGG	1 cut(s)	1747
SduI	GDGCHC	5 cut(s)	54, 117, 510, 595, 1528
SfaNI	GCATC	8 cut(s)	92, 486, 537, 1692, 1693, 1882, 2752, 2956
SfcI	CTRYAG	3 cut(s)	2642, 2745, 3345
SinI	GGWCC	3 cut(s)	2447, 2623, 3355
SmiI	ATTTAAAT	1 cut(s)	1020
SmiMI	CAYNNNNRTG	5 cut(s)	47, 494, 579, 2043, 3098
SmlI	CTYRAG	3 cut(s)	1527, 1826, 3431
SmoI	CTYRAG	3 cut(s)	1527, 1826, 3431
SphI	GCATGC	1 cut(s)	1355
SsiI	CCGC	6 cut(s)	248, 256, 317, 326, 1284, 1864
SspI	AATATT	1 cut(s)	1336
SspMI	CTAG	6 cut(s)	119, 695, 1244, 1635, 2688, 2712
StyD4I	CCNGG	1 cut(s)	1745
StyI	CCWWGG	1 cut(s)	1497
SwaI	ATTTAAAT	1 cut(s)	1020
TaaI	ACNGT	8 cut(s)	110, 295, 493, 1100, 1574, 2810, 2969, 3349
TaiI	ACGT	3 cut(s)	755, 1885, 3390
TaqI	TCGA	7 cut(s)	261, 545, 835, 1171, 1701, 2389, 2735
TaqII	GACCGA	1 cut(s)	519
TatI	WGTACW	2 cut(s)	2805, 3201
TauI	GCSGC	2 cut(s)	329, 1866
TscAI	CASTG	3 cut(s)	496, 2206, 2525
TseFI	GTSAC	4 cut(s)	27, 1672, 1708, 3383
TseI	GCWGC	7 cut(s)	217, 1895, 2209, 2261, 2321, 2324, 2715
Tsp45I	GTSAC	4 cut(s)	27, 1672, 1708, 3383
TspGWI	ACGGA	1 cut(s)	500
TspRI	CASTG	3 cut(s)	496, 2206, 2525
Tth111I	GACNNNGTC	1 cut(s)	3052
Van91I	CCANNNNNTGG	3 cut(s)	955, 1445, 2273
VpaK11BI	GGWCC	3 cut(s)	2447, 2623, 3355
XceI	RCATGY	4 cut(s)	1205, 1355, 1388, 2096
XcmI	CCANNNNNNNNNTGG	1 cut(s)	3034
XmiI	GTMKAC	2 cut(s)	1253, 2256
XmnI	GAANNNNTTC	2 cut(s)	1796, 2775
XspI	CTAG	6 cut(s)	119, 695, 1244, 1635, 2688, 2712
ZrmI	AGTACT	1 cut(s)	3203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.