Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004842.1

Orthogroup ID

OG0000874

Physical Location & Seq

Genomic Coordinates Reverse (-)

89308 .. 91632

Gene Structure 2325 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004842.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

atgaagagtctttcactctcagcctcaagccactcaaaatccctcctccaccttcttaaaccccaaaccccccaatccaaatcccccgtcttcctcctcctgagccgccacctctgcgcaaatcccaaccaaccaccccaagacgactattccctcgtaacccaagtcctccaactcctccgacccaatgagaaagactggaactttgaccaactccacaccctcctcttccccaactcaacctctccctctcctcgctcccttttcctcatcactcgccgccttggcgctccctccaaagccctcaaattcttcgattacgtctccgaaaacgtggccggaacccctccaggatccaaggctctgctctccaccgcattccaggcccttctggagctcacattgcgagagcccacctcgaaaaacaagctctttgagctttacaagatggccaaggaccggaatgtcccgcttaatctcaaggccgcaggtctgcttgttcggtccatgggcgcggctgggatggaggacgaggctctcatagtgtttaacgagcttcatttggggttgaaaactacccacattcgcaatgtgatgattgggatgttgctgaagattgggcgagtggatgatgcactgaaggtgctcgacgaaatgcttcacccagaagcgaagtttcgggttgatgattttaccagcgatgttgtgattggctcattattgaggagacagcagatagggaggagtgtcagtgaggaagaaattgtggagttggtgtcgagatttggtaagcatggtgtgtttcctaatagcacaatacttacgaaattggtcactgttttgtgtaggaataggaaggttggtattgcttgggatgttttacatgacgtcatgaagatgggtggtgctgtagaagctgctccgtgcaatgcgcttttgacagctttgggaagaggtaatgattttaagaggatgagtgagcttatggcgaagatggaagagatgggcattaagcccgatgttataacttttggtattcttatcaatcggttatgcaagtctaggagaatagatgctgccttggaggtgtttgaaaagatgagtggaggagtaaagggggtttcggctgaaccagatgtgatcatctataacactctgattgatggactttgtaaagtgggaaggcaggaagaaggattgcgtttgatggaaaggatgagatcgcaaggtggctgtgctcctaatactgttacctacaattgtttgattgatggcttcaacaaagttggggacattgagatgggccatgagctctttgataaaatgaaggaggaagggataccactaaatgtggccacccttaatactttgcttgatggtctgtgcaggcatgggagactcaacactgcatttgacttcttcaatgaaatgcagagggatggtctgaaaggcaatgctgtcacttacacaatcttaatcacttccttttgtaatgtgaacaatattatcaaggcaatggagttgtttaatcagatgttgagcgctgagtgtcccacagatgcaagagtttaccactgcttgatctctggtttaagccaagctggaaggatggaggatgccagctttgttgtttcgaagttgaaggaggctggtttctctatggatatcgtttcctacaatgttatgattaatgggttctccagtaaaaataagcctgataagattcatgagatgattgaggaaatggaggcgtctggagtgaagcctgatagcgtaacatacaacaccttgcttgcctacttaagcaaagctggggacttcaaaagtgcacataaagtacttgacaggatgatggatgagggtattgttcccactgttgtcacttttggtacattgattcatgcacattgcttggatggtgatatcgacaaagccatgagaatcttcagagacatgggttctaagtcaaagatacctccgaatactgtaatatacagtgatttaataaattctctctgcaagaagaatgatgtggaacaagctctttatttgatggaggatatgaaggagaaaggggtcagacctaatacccaaacgttcaatgccctgttcaaaggccttagagagaacaatttattaaagaaggcatttcaatttatggatcgaatggttgaacagacctgtaatcctgattatataacgatggagattcttactgaatggctttctggtgttggtgaaatagagaggttgagaaagtttgttcaaggatatccggtttcaaagcctcagcccaaacagaaggatgggattgtcgcattgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

774

Amino Acids

86.32

Weight (kDa)

8.22

Isoelectric Point (pI)

35.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000874)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61520 AT5G28370 AT5G28460
fragaria_vesca	FvH4_5g03011 FvH4_5g03011 FvH4_5g32150 FvH4_5g32150 FvH4_5g32150 FvH4_5g32150 FvH4_5g32150 FvH4_7g15360
malus_domestica	MD01G1071400.v1.1 MD07G1131300.v1.1
prunus_persica	Prupe.2G177500_v2.0.a1
pyrus_communis	pycom01g10040 pycom04g02360 pycom07g12830
rosa_chinensis	RchiOBHm_Chr1g0357681 RchiOBHm_Chr3g0468501 RchiOBHm_Chr5g0017031 RchiOBHm_Chr7g0228211 RchiOBHm_Chr7g0228281 RchiOBHm_Chr7g0228291
rosa_laevigata	RLG00000001577 RLG00000005833 RLG00000009015 RLG00000009124 RLG00000012161 RLG00000028007 RLG00000028484
rosa_multiflora	Rmu_sc0001062.1_g000004 Rmu_sc0001626.1_g000014 Rmu_sc0001626.1_g000015 Rmu_sc0002582.1_g000009 Rmu_sc0003490.1_g000025 Rmu_sc0003490.1_g000026 Rmu_sc0004842.1_g000011 Rmu_sc0004842.1_g000012 Rmu_sc0004842.1_g000020 Rmu_ssc0000425.1_g000002
rosa_roxburghii	Rroxscaffold_3G00231300 Rroxscaffold_4G00298600 Rroxscaffold_6G00429570
rosa_rugosa	Rorug01G0257700 Rorug02G0051500 Rorug02G0572600 Rorug07G0246900.1 Rorug07G0247000 Rorug07G0247000
rosa_samantha	Rh1AG271700 Rh1BG238800 Rh1CG255600 Rh1DG267200 Rh3AG143700 Rh3BG166200 Rh3BG166300 Rh5AG043600 Rh7AG400900 Rh7AG401200 Rh7BG382400 Rh7CG420000 Rh7DG396900 Rh7DG397300
rosa_wichuraiana	Rw1G024230 Rw7G033300 Rw7G033330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1025
AasI	GACNNNNNNGTC	1 cut(s)	464
AatII	GACGTC	1 cut(s)	891
Acc16I	TGCGCA	1 cut(s)	118
Acc36I	ACCTGC	1 cut(s)	479
AccII	CGCG	1 cut(s)	515
AciI	CCGC	6 cut(s)	106, 280, 375, 470, 486, 515
AclI	AACGTT	1 cut(s)	2096
AclWI	GGATC	3 cut(s)	348, 361, 2169
AcoI	YGGCCR	3 cut(s)	336, 450, 1353
AcsI	RAATTY	2 cut(s)	308, 2008
AcuI	CTGAAG	3 cut(s)	632, 659, 1930
AcyI	GRCGYC	2 cut(s)	888, 1751
AfaI	GTAC	2 cut(s)	1839, 1891
AfeI	AGCGCT	1 cut(s)	1543
AfiI	CCNNNNNNNGG	1 cut(s)	459
AflII	CTTAAG	1 cut(s)	1801
AjnI	CCWGG	2 cut(s)	349, 381
Alw21I	GWGCWC	5 cut(s)	399, 648, 1240, 1314, 1831
Alw26I	GTCTC	4 cut(s)	328, 721, 1390, 1944
Alw44I	GTGCAC	1 cut(s)	1827
AlwI	GGATC	3 cut(s)	348, 361, 2169
Aor51HI	AGCGCT	1 cut(s)	1543
AoxI	GGCC	7 cut(s)	336, 384, 450, 483, 1303, 1353, 2116
ApaLI	GTGCAC	1 cut(s)	1827
ApeKI	GCWGC	2 cut(s)	917, 1076
ApoI	RAATTY	2 cut(s)	308, 2008
ArsI	GACNNNNNNTTYG	4 cut(s)	72, 104, 188, 220
AseI	ATTAAT	1 cut(s)	1689
Asp700I	GAANNNNTTC	1 cut(s)	657
AspLEI	GCGC	5 cut(s)	119, 290, 515, 934, 1544
AspS9I	GGNCC	4 cut(s)	385, 457, 504, 1303
AsuHPI	GGTGA	3 cut(s)	653, 1931, 2249
AsuII	TTCGAA	1 cut(s)	1634
AvaII	GGWCC	2 cut(s)	457, 504
BaeGI	GKGCMC	1 cut(s)	1831
BalI	TGGCCA	2 cut(s)	452, 1355
BamHI	GGATCC	1 cut(s)	353
BanII	GRGCYC	3 cut(s)	399, 414, 1314
BbsI	GAAGAC	1 cut(s)	82
Bbv12I	GWGCWC	5 cut(s)	399, 648, 1240, 1314, 1831
BbvCI	CCTCAGC	1 cut(s)	2289
BbvI	GCAGC	2 cut(s)	904, 1063
BciT130I	CCWGG	2 cut(s)	351, 383
BciVI	GTATCC	1 cut(s)	1332
BclI	TGATCA	1 cut(s)	1140
BcoDI	GTCTC	4 cut(s)	328, 721, 1390, 1944
BfaI	CTAG	1 cut(s)	1062
BfmI	CTRYAG	1 cut(s)	909
BfoI	RGCGCY	2 cut(s)	291, 1545
BfrI	CTTAAG	1 cut(s)	1801
BfuAI	ACCTGC	1 cut(s)	479
BfuI	GTATCC	1 cut(s)	1332
BglI	GCCNNNNNGGC	1 cut(s)	285
BisI	GCNGC	6 cut(s)	106, 280, 486, 516, 918, 1077
BlsI	GCNGC	6 cut(s)	107, 281, 487, 517, 919, 1078
BmcAI	AGTACT	1 cut(s)	1839
Bme1390I	CCNGG	2 cut(s)	351, 383
Bme18I	GGWCC	2 cut(s)	457, 504
BmgT120I	GGNCC	4 cut(s)	385, 457, 504, 1303
BmiI	GGNNCC	2 cut(s)	343, 355
BmrFI	CCNGG	2 cut(s)	351, 383
BmsI	GCATC	4 cut(s)	622, 1063, 1549, 1606
BpiI	GAAGAC	1 cut(s)	82
BplI	GAGNNNNNCTC	2 cut(s)	401, 433
BpmI	CTGGAG	4 cut(s)	333, 413, 1684, 1776
Bpu10I	CCTNAGC	2 cut(s)	101, 2289
Bpu14I	TTCGAA	1 cut(s)	1634
BpuEI	CTTGAG	2 cut(s)	10, 464
BsaHI	GRCGYC	2 cut(s)	888, 1751
BsaJI	CCNNGG	5 cut(s)	283, 357, 453, 507, 1080
BsaWI	WCCGGW	2 cut(s)	459, 2275
BsaXI	ACNNNNNCTCC	4 cut(s)	736, 761, 766, 791
Bsc4I	CCNNNNNNNGG	1 cut(s)	459
Bse1I	ACTGG	2 cut(s)	203, 1701
Bse3DI	GCAATG	6 cut(s)	401, 595, 934, 1459, 1521, 1906
BseBI	CCWGG	2 cut(s)	351, 383
BseDI	CCNNGG	5 cut(s)	283, 357, 453, 507, 1080
BseLI	CCNNNNNNNGG	1 cut(s)	459
BseMI	GCAATG	6 cut(s)	401, 595, 934, 1459, 1521, 1906
BseMII	CTCAG	4 cut(s)	33, 92, 1536, 2303
BseNI	ACTGG	2 cut(s)	203, 1701
BseRI	GAGGAG	8 cut(s)	35, 86, 167, 215, 243, 739, 757, 1122
BseSI	GKGCMC	1 cut(s)	1831
BseXI	GCAGC	2 cut(s)	904, 1063
BseYI	CCCAGC	2 cut(s)	518, 1811
BsgI	GTGCAG	1 cut(s)	1405
Bsh1236I	CGCG	1 cut(s)	515
BshFI	GGCC	7 cut(s)	338, 386, 452, 485, 1305, 1355, 2118
BsiHKAI	GWGCWC	5 cut(s)	399, 648, 1240, 1314, 1831
BsiSI	CCGG	3 cut(s)	339, 460, 2276
BslFI	GGGAC	4 cut(s)	452, 1304, 1536, 1829
BslI	CCNNNNNNNGG	1 cut(s)	459
BsmAI	GTCTC	4 cut(s)	328, 721, 1390, 1944
BsmBI	CGTCTC	1 cut(s)	328
BsmFI	GGGAC	4 cut(s)	452, 1304, 1536, 1829
BsmI	GAATGC	1 cut(s)	377
BsnI	GGCC	7 cut(s)	338, 386, 452, 485, 1305, 1355, 2118
Bsp119I	TTCGAA	1 cut(s)	1634
Bsp1286I	GDGCHC	6 cut(s)	399, 414, 648, 1240, 1314, 1831
Bsp143I	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
Bsp19I	CCATGG	1 cut(s)	507
BspACI	CCGC	6 cut(s)	106, 280, 375, 470, 486, 515
BspANI	GGCC	7 cut(s)	338, 386, 452, 485, 1305, 1355, 2118
BspCNI	CTCAG	4 cut(s)	32, 93, 1537, 2302
BspFNI	CGCG	1 cut(s)	515
BspHI	TCATGA	2 cut(s)	891, 1726
BspLI	GGNNCC	2 cut(s)	343, 355
BspMI	ACCTGC	1 cut(s)	479
BspPI	GGATC	3 cut(s)	348, 361, 2169
BspT104I	TTCGAA	1 cut(s)	1634
BspTI	CTTAAG	1 cut(s)	1801
BsrDI	GCAATG	6 cut(s)	401, 595, 934, 1459, 1521, 1906
BsrI	ACTGG	2 cut(s)	203, 1701
BssECI	CCNNGG	5 cut(s)	283, 357, 453, 507, 1080
BssMI	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
BssNI	GRCGYC	2 cut(s)	888, 1751
BssT1I	CCWWGG	5 cut(s)	283, 357, 453, 507, 1080
Bst2UI	CCWGG	2 cut(s)	351, 383
Bst4CI	ACNGT	5 cut(s)	838, 1249, 1876, 1987, 1997
Bst6I	CTCTTC	3 cut(s)	233, 946, 993
BstACI	GRCGYC	2 cut(s)	888, 1751
BstAFI	CTTAAG	1 cut(s)	1801
BstBI	TTCGAA	1 cut(s)	1634
BstC8I	GCNNGC	3 cut(s)	1388, 1621, 1794
BstDEI	CTNAG	6 cut(s)	19, 101, 1545, 1962, 2120, 2289
BstDSI	CCRYGG	1 cut(s)	507
BstFNI	CGCG	1 cut(s)	515
BstH2I	RGCGCY	2 cut(s)	291, 1545
BstHHI	GCGC	5 cut(s)	119, 290, 515, 934, 1544
BstKTI	GATC	5 cut(s)	356, 1143, 1223, 1584, 2164
BstMAI	GTCTC	4 cut(s)	328, 721, 1390, 1944
BstMBI	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
BstMWI	GCNNNNNNNGC	6 cut(s)	114, 285, 383, 403, 436, 914
BstNI	CCWGG	2 cut(s)	351, 383
BstSCI	CCNGG	2 cut(s)	349, 381
BstSFI	CTRYAG	1 cut(s)	909
BstSLI	GKGCMC	1 cut(s)	1831
BstUI	CGCG	1 cut(s)	515
BstV1I	GCAGC	2 cut(s)	904, 1063
BstV2I	GAAGAC	1 cut(s)	82
BstX2I	RGATCY	1 cut(s)	353
BstYI	RGATCY	1 cut(s)	353
BsuI	GTATCC	1 cut(s)	1332
BsuRI	GGCC	7 cut(s)	338, 386, 452, 485, 1305, 1355, 2118
BtgI	CCRYGG	1 cut(s)	507
BtgZI	GCGATG	1 cut(s)	714
BtsI	GCAGTG	2 cut(s)	1404, 1573
BtsIMutI	CAGTG	7 cut(s)	635, 757, 834, 1404, 1573, 1872, 2002
BveI	ACCTGC	1 cut(s)	479
Cac8I	GCNNGC	3 cut(s)	1388, 1621, 1794
CciI	TCATGA	2 cut(s)	891, 1726
CfoI	GCGC	5 cut(s)	119, 290, 515, 934, 1544
Cfr13I	GGNCC	4 cut(s)	385, 457, 504, 1303
CseI	GACGC	1 cut(s)	1740
Csp6I	GTAC	2 cut(s)	1838, 1890
CviQI	GTAC	2 cut(s)	1838, 1890
DdeI	CTNAG	6 cut(s)	19, 101, 1545, 1962, 2120, 2289
DpnI	GATC	5 cut(s)	355, 1142, 1222, 1583, 2163
DpnII	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
DrdI	GACNNNNNNGTC	1 cut(s)	464
DseDI	GACNNNNNNGTC	1 cut(s)	464
EaeI	YGGCCR	3 cut(s)	336, 450, 1353
Eam1104I	CTCTTC	3 cut(s)	233, 946, 993
EarI	CTCTTC	3 cut(s)	233, 946, 993
Ecl136II	GAGCTC	2 cut(s)	397, 1312
Eco130I	CCWWGG	5 cut(s)	283, 357, 453, 507, 1080
Eco147I	AGGCCT	1 cut(s)	2118
Eco24I	GRGCYC	3 cut(s)	399, 414, 1314
Eco32I	GATATC	3 cut(s)	1666, 1924, 2273
Eco47I	GGWCC	2 cut(s)	457, 504
Eco47III	AGCGCT	1 cut(s)	1543
Eco53kI	GAGCTC	2 cut(s)	397, 1312
Eco57I	CTGAAG	3 cut(s)	632, 659, 1930
EcoICRI	GAGCTC	2 cut(s)	397, 1312
EcoO109I	RGGNCCY	1 cut(s)	385
EcoRII	CCWGG	2 cut(s)	349, 381
EcoRV	GATATC	3 cut(s)	1666, 1924, 2273
EcoT14I	CCWWGG	5 cut(s)	283, 357, 453, 507, 1080
EcoT38I	GRGCYC	3 cut(s)	399, 414, 1314
ErhI	CCWWGG	5 cut(s)	283, 357, 453, 507, 1080
Esp3I	CGTCTC	1 cut(s)	328
FaqI	GGGAC	4 cut(s)	452, 1304, 1536, 1829
FauI	CCCGC	1 cut(s)	477
FbaI	TGATCA	1 cut(s)	1140
Fnu4HI	GCNGC	6 cut(s)	106, 280, 486, 516, 918, 1077
FriOI	GRGCYC	3 cut(s)	399, 414, 1314
Fsp4HI	GCNGC	6 cut(s)	106, 280, 486, 516, 918, 1077
FspBI	CTAG	1 cut(s)	1062
FspI	TGCGCA	1 cut(s)	118
GlaI	GCGC	5 cut(s)	118, 289, 514, 933, 1543
GluI	GCNGC	6 cut(s)	106, 280, 486, 516, 918, 1077
GsaI	CCCAGC	2 cut(s)	522, 1815
GsuI	CTGGAG	4 cut(s)	333, 413, 1684, 1776
HaeII	RGCGCY	2 cut(s)	291, 1545
HaeIII	GGCC	7 cut(s)	338, 386, 452, 485, 1305, 1355, 2118
HapII	CCGG	3 cut(s)	339, 460, 2276
HgaI	GACGC	1 cut(s)	1740
HhaI	GCGC	5 cut(s)	119, 290, 515, 934, 1544
Hin1I	GRCGYC	2 cut(s)	888, 1751
Hin6I	GCGC	5 cut(s)	117, 288, 513, 932, 1542
HinP1I	GCGC	5 cut(s)	117, 288, 513, 932, 1542
HinfI	GANTC	6 cut(s)	7, 1398, 1723, 1897, 1941, 2209
HpaII	CCGG	3 cut(s)	339, 460, 2276
HphI	GGTGA	3 cut(s)	653, 1931, 2249
Hpy166II	GTNNAC	3 cut(s)	1498, 1570, 1829
Hpy188I	TCNGA	8 cut(s)	182, 328, 1158, 1446, 1533, 1949, 1980, 2081
Hpy188III	TCNNGA	7 cut(s)	100, 392, 780, 892, 1727, 1755, 2189
Hpy8I	GTNNAC	3 cut(s)	1498, 1570, 1829
Hpy99I	CGWCG	1 cut(s)	653
HpyCH4III	ACNGT	5 cut(s)	838, 1249, 1876, 1987, 1997
HpyCH4IV	ACGT	4 cut(s)	321, 333, 888, 2096
HpyF10VI	GCNNNNNNNGC	6 cut(s)	114, 285, 383, 403, 436, 914
HpyF3I	CTNAG	6 cut(s)	19, 101, 1545, 1962, 2120, 2289
HpySE526I	ACGT	4 cut(s)	321, 333, 888, 2096
Hsp92I	GRCGYC	2 cut(s)	888, 1751
HspAI	GCGC	5 cut(s)	117, 288, 513, 932, 1542
Ksp22I	TGATCA	1 cut(s)	1140
Kzo9I	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
LmnI	GCTCC	5 cut(s)	263, 295, 394, 925, 1243
Lsp1109I	GCAGC	2 cut(s)	904, 1063
LweI	GCATC	4 cut(s)	622, 1063, 1549, 1606
MaeI	CTAG	1 cut(s)	1062
MaeII	ACGT	4 cut(s)	321, 333, 888, 2096
MaeIII	GTNAC	6 cut(s)	157, 832, 1249, 1459, 1774, 1879
MalI	GATC	5 cut(s)	355, 1142, 1222, 1583, 2163
MboI	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
MfeI	CAATTG	1 cut(s)	1258
MflI	RGATCY	1 cut(s)	353
MhlI	GDGCHC	6 cut(s)	399, 414, 648, 1240, 1314, 1831
MlsI	TGGCCA	2 cut(s)	452, 1355
MluCI	AATT	7 cut(s)	308, 762, 827, 1258, 2008, 2131, 2153
MluNI	TGGCCA	2 cut(s)	452, 1355
MlyI	GAGTC	2 cut(s)	16, 1392
MmeI	TCCRAC	2 cut(s)	196, 205
Mox20I	TGGCCA	2 cut(s)	452, 1355
MroXI	GAANNNNTTC	1 cut(s)	657
MscI	TGGCCA	2 cut(s)	452, 1355
MslI	CAYNNNNRTG	2 cut(s)	896, 1298
Msp20I	TGGCCA	2 cut(s)	452, 1355
MspCI	CTTAAG	1 cut(s)	1801
MspI	CCGG	3 cut(s)	339, 460, 2276
MspR9I	CCNGG	2 cut(s)	351, 383
MunI	CAATTG	1 cut(s)	1258
Mva1269I	GAATGC	1 cut(s)	377
MvaI	CCWGG	2 cut(s)	351, 383
MvnI	CGCG	1 cut(s)	515
MwoI	GCNNNNNNNGC	6 cut(s)	114, 285, 383, 403, 436, 914
NcoI	CCATGG	1 cut(s)	507
NdeII	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
NlaIV	GGNNCC	2 cut(s)	343, 355
NmuCI	GTSAC	3 cut(s)	832, 1459, 1879
NsbI	TGCGCA	1 cut(s)	118
NspV	TTCGAA	1 cut(s)	1634
PagI	TCATGA	2 cut(s)	891, 1726
PceI	AGGCCT	1 cut(s)	2118
PctI	GAATGC	1 cut(s)	377
PdmI	GAANNNNTTC	1 cut(s)	657
PfeI	GAWTC	4 cut(s)	1723, 1897, 1941, 2209
PfoI	TCCNGGA	1 cut(s)	349
PkrI	GCNGC	6 cut(s)	107, 281, 487, 517, 919, 1078
PleI	GAGTC	2 cut(s)	15, 1392
PpsI	GAGTC	2 cut(s)	15, 1392
PshBI	ATTAAT	1 cut(s)	1689
PsiI	TTATAA	1 cut(s)	1025
Psp124BI	GAGCTC	2 cut(s)	399, 1314
Psp1406I	AACGTT	1 cut(s)	2096
Psp6I	CCWGG	2 cut(s)	349, 381
PspFI	CCCAGC	2 cut(s)	518, 1811
PspGI	CCWGG	2 cut(s)	349, 381
PspN4I	GGNNCC	2 cut(s)	343, 355
PspPI	GGNCC	4 cut(s)	385, 457, 504, 1303
PsuI	RGATCY	1 cut(s)	353
RsaI	GTAC	2 cut(s)	1839, 1891
RsaNI	GTAC	2 cut(s)	1838, 1890
RseI	CAYNNNNRTG	2 cut(s)	896, 1298
SacI	GAGCTC	2 cut(s)	399, 1314
SatI	GCNGC	6 cut(s)	106, 280, 486, 516, 918, 1077
Sau3AI	GATC	5 cut(s)	353, 1140, 1220, 1581, 2161
Sau96I	GGNCC	4 cut(s)	385, 457, 504, 1303
ScaI	AGTACT	1 cut(s)	1839
SchI	GAGTC	2 cut(s)	16, 1392
ScrFI	CCNGG	2 cut(s)	351, 383
SduI	GDGCHC	6 cut(s)	399, 414, 648, 1240, 1314, 1831
SfaNI	GCATC	4 cut(s)	622, 1063, 1549, 1606
SfcI	CTRYAG	1 cut(s)	909
SfuI	TTCGAA	1 cut(s)	1634
SinI	GGWCC	2 cut(s)	457, 504
SmiMI	CAYNNNNRTG	2 cut(s)	896, 1298
SmlI	CTYRAG	3 cut(s)	25, 479, 1801
SmoI	CTYRAG	3 cut(s)	25, 479, 1801
Sse9I	AATT	7 cut(s)	308, 762, 827, 1258, 2008, 2131, 2153
SseBI	AGGCCT	1 cut(s)	2118
SsiI	CCGC	6 cut(s)	106, 280, 375, 470, 486, 515
SspI	AATATT	1 cut(s)	1504
SspMI	CTAG	1 cut(s)	1062
SstI	GAGCTC	2 cut(s)	399, 1314
StuI	AGGCCT	1 cut(s)	2118
StyD4I	CCNGG	2 cut(s)	349, 381
StyI	CCWWGG	5 cut(s)	283, 357, 453, 507, 1080
TaaI	ACNGT	5 cut(s)	838, 1249, 1876, 1987, 1997
TaiI	ACGT	4 cut(s)	324, 336, 891, 2099
TaqI	TCGA	7 cut(s)	315, 419, 648, 779, 1634, 1926, 2164
TaqII	GACCGA	1 cut(s)	492
TasI	AATT	7 cut(s)	308, 762, 827, 1258, 2008, 2131, 2153
TatI	WGTACW	1 cut(s)	1837
TauI	GCSGC	4 cut(s)	108, 282, 488, 518
TfiI	GAWTC	4 cut(s)	1723, 1897, 1941, 2209
TscAI	CASTG	7 cut(s)	642, 757, 841, 1411, 1580, 1879, 2002
TseFI	GTSAC	3 cut(s)	832, 1459, 1879
TseI	GCWGC	2 cut(s)	917, 1076
Tsp45I	GTSAC	3 cut(s)	832, 1459, 1879
TspDTI	ATGAA	8 cut(s)	17, 548, 908, 1340, 1440, 1715, 1889, 2078
TspGWI	ACGGA	1 cut(s)	912
TspRI	CASTG	7 cut(s)	642, 757, 841, 1411, 1580, 1879, 2002
Vha464I	CTTAAG	1 cut(s)	1801
VneI	GTGCAC	1 cut(s)	1827
VpaK11BI	GGWCC	2 cut(s)	457, 504
VspI	ATTAAT	1 cut(s)	1689
XapI	RAATTY	2 cut(s)	308, 2008
XmnI	GAANNNNTTC	1 cut(s)	657
XspI	CTAG	1 cut(s)	1062
ZraI	GACGTC	1 cut(s)	889
ZrmI	AGTACT	1 cut(s)	1839

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.