Rorug02G0572600

Belongs to the small heat shock protein (HSP20) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000874
Physical Location & Seq
Reverse (-)
69835247 .. 69840825
5579 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0572600.1

Sequence Viewer

Length: 1818 bp
ATGACGGAGGAGAGCGGCGCTAGGGTTTCCAATGATGCATCGCAAACAAGGCAAAGAAAGAAAAGAAAGTGGGATCAACCAGCGGAGTCATTGGTTTCAGCTGGTTTAGCGGTGCCTGGGGCGCTCCCATTAGGCAATGTGGGATTGCTTGGTGGGATGACGCTTCCCGGTGTAAGTCCAGCGTCCGGTGCGATGAATCCACTTGCTGCTGGCTTTCCTACTGTACCGCAGGCGTATCAGGTGCCTCTGATACCGCAGCAAGCTGCAACAGTTATCCAGAAACTAATACAACCAAAGATCCAAGATGAGTTAATAGCACGAGAAATTGTTATTAATGATGCAGAGTCTTCTATTCGGTACAAGCTGACAAAACGCCAAACACAGGAGGAGATCCAAAGGTGCACTGGTGCTGTGGTGATAACAAGGGGCAAGTATCATCCACCAAATGCGTCAACTGATGGTGAAAAGGCATTATATCTTCATATTTCTGCAGGGGCTAATATAAAAGAGACGACCGAACGGATTTTAGCAGTTGATCGTGCTGCTGCCATGGTTGAAGAAATGTTGAAACAGGGTCAAAATTTACATCCCTTGTCATTGTTGTCTCCTTCTACCGTGAGTAATGGACTGAAGGAACCAAGCACATGTGTATATCTGGGCTTTGATGCAGATCCATCATTGAACATTGCTGCCCGTATACGTGGACCAAGTGACCAGTATATAAATCACATTATGAATGAAACAGGAGCAACTGTCTTACTCAGAGGGCGTGGTTCAGGAAATATTGATTGTTTACATGGTGAAGAAGGACAACAACCATTGCATCTGTTCTTGTCAAGTAATAATTTGAAAAGTCTCGAAGATGCTAGGCTTTTGGCTGAACATCTTTTGGATACAATCAGCGTAGAGTGTGGTGTCTCCAGGGTTTCTTCATCTAAGGTTTATAGTGCTATTGCACCCCCACAGCAGGTATATAGTGCTGTTCCTCCACCACATCAGTTGTCGGCTGGAGTTCAGAGTTCTGGAAATGAGATAAAAGCCATTACAACTTTGGCGTCTGCAACTGTCGGTCTTACACCAGCTCCTCCGGTTTCCTCAGTTGGGACTCCTGTGACCACTACCGTTTTTACTCAAGGGACAGTATCTCAGTCTGAAGGATTTTCAAACTGTGTGCAATCTCAGGCAAGCAGTGGTGGTTGTCCACAACTCCCATCTGGTGGAACAATCTACAGTGGATATGGTGGGATATATCCTCAAGTCACACCTTTACAACAAGTTGCCCTGGCCCTTAGACTGTCAACATCCCCTATCACTTCTACAATTGCTCCCACAACATCAGTCCCAAGCACTGAACCAAAGTTGAATACGAAATTCAGCTCTGATTCTGAGAAGGAAAAACGGCCTCCACAAAGACGGAAGTTTCAGGAGTTACCAGTTAGTTTGAAGGGTCCTGCCGAAGTTCATCAGGAATTGGACTTATTAAAGCCACCTGAACTGGTGTCAGATTTGGGTGTGAGGAATGTATTAACTATGCCAGCTCCAAAGAAGTTGGTCCAGCAGGTTTCAAATGGAATGCCGCCACCGCCACCCAGAACCATGCCTCCACCTCCACCAAAATTTACATCATCAACACAGGTTGTTAAAGAGATTGACAAGAACAATGTTCTGAAAAAGACAAAATCTGATAATGTACCTGATACTTTGGTCAAGCTCATGGAATATGGAGAAGATGATGATGACTCTGAGGAAACTGATGAACAGTCACCCAATAGCAACCCTGTTGCAGTAACAGCTCGAAAGCCTTTCTGGGCTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04141 map04141
Pfam Domains
Protein Families
HSP20

Protein Analysis

605

Amino Acids

64.54

Weight (kDa)

6.54

Isoelectric Point (pI)

52.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
KH_12 PF23469 105 - 193 8.6e-34 KH-domain
KH-I_KHDC4-BBP PF22675 223 - 298 9.1e-26 KHDC4/BBP-like, KH-domain type I
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 958, 1549
AccB1I GGYRCC 2 cut(s) 112, 241
AccB7I CCANNNNNTGG 1 cut(s) 1217
AccBSI CCGCTC 1 cut(s) 15
AccI GTMKAC 1 cut(s) 697
AciI CCGC 7 cut(s) 15, 83, 110, 227, 254, 1577, 1583
AclWI GGATC 4 cut(s) 81, 292, 385, 665
AcsI RAATTY 3 cut(s) 580, 1370, 1616
AcuI CTGAAG 2 cut(s) 650, 1173
AcyI GRCGYC 1 cut(s) 1055
AfaI GTAC 3 cut(s) 225, 359, 1692
AfiI CCNNNNNNNGG 5 cut(s) 185, 382, 967, 1101, 1217
AflIII ACRYGT 1 cut(s) 644
AgsI TTSAA 8 cut(s) 557, 568, 682, 850, 1164, 1363, 1444, 1566
AjnI CCWGG 3 cut(s) 115, 920, 1281
AloI GAACNNNNNNTCC 2 cut(s) 1585, 1617
AluBI AGCT 8 cut(s) 101, 263, 364, 1082, 1377, 1538, 1711, 1793
AluI AGCT 8 cut(s) 101, 263, 364, 1082, 1377, 1538, 1711, 1793
Alw21I GWGCWC 1 cut(s) 404
Alw26I GTCTC 4 cut(s) 503, 609, 860, 922
Alw44I GTGCAC 1 cut(s) 400
AlwI GGATC 4 cut(s) 81, 292, 385, 665
AoxI GGCC 2 cut(s) 1284, 1400
ApaLI GTGCAC 1 cut(s) 400
ApeKI GCWGC 6 cut(s) 206, 256, 263, 542, 545, 689
ApoI RAATTY 3 cut(s) 580, 1370, 1616
AseI ATTAAT 1 cut(s) 333
AspLEI GCGC 2 cut(s) 20, 124
AspS9I GGNCC 4 cut(s) 704, 1285, 1448, 1552
AsuC2I CCSGG 1 cut(s) 168
AsuHPI GGTGA 4 cut(s) 427, 473, 812, 1755
AvaII GGWCC 3 cut(s) 704, 1448, 1552
BaeGI GKGCMC 1 cut(s) 404
BaeI ACNNNNGTAYC 2 cut(s) 1689, 1722
BanI GGYRCC 2 cut(s) 112, 241
BauI CACGAG 1 cut(s) 318
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 404
BbvI GCAGC 6 cut(s) 193, 250, 268, 529, 532, 676
BccI CCATC 3 cut(s) 452, 682, 1219
BceAI ACGGC 1 cut(s) 1415
BciT130I CCWGG 3 cut(s) 117, 922, 1283
BciVI GTATCC 1 cut(s) 886
BcnI CCSGG 1 cut(s) 168
BcoDI GTCTC 4 cut(s) 503, 609, 860, 922
BfaI CTAG 2 cut(s) 21, 867
BfmI CTRYAG 2 cut(s) 489, 1228
BfoI RGCGCY 2 cut(s) 21, 125
BfuAI ACCTGC 2 cut(s) 958, 1549
BfuI GTATCC 1 cut(s) 886
BisI GCNGC 8 cut(s) 16, 207, 257, 264, 543, 546, 690, 1577
BlsI GCNGC 8 cut(s) 17, 208, 258, 265, 544, 547, 691, 1578
Bme1390I CCNGG 4 cut(s) 117, 168, 922, 1283
Bme18I GGWCC 3 cut(s) 704, 1448, 1552
BmgT120I GGNCC 4 cut(s) 704, 1285, 1448, 1552
BmiI GGNNCC 4 cut(s) 114, 243, 636, 1449
BmrFI CCNGG 4 cut(s) 117, 168, 922, 1283
BmsI GCATC 6 cut(s) 25, 47, 328, 655, 832, 853
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 2 cut(s) 904, 1029
BpuEI CTTGAG 2 cut(s) 1116, 1239
BpuMI CCSGG 1 cut(s) 168
BsaAI YACGTR 1 cut(s) 701
BsaBI GATNNNNATC 1 cut(s) 669
BsaHI GRCGYC 1 cut(s) 1055
BsaJI CCNNGG 4 cut(s) 116, 549, 921, 1281
BsaWI WCCGGW 2 cut(s) 185, 1087
BsaXI ACNNNNNCTCC 8 cut(s) 738, 768, 1066, 1096, 1309, 1339, 1585, 1615
Bsc4I CCNNNNNNNGG 5 cut(s) 185, 382, 967, 1101, 1217
Bse1I ACTGG 4 cut(s) 409, 715, 1433, 1500
Bse3DI GCAATG 3 cut(s) 142, 684, 818
Bse8I GATNNNNATC 1 cut(s) 669
BseBI CCWGG 3 cut(s) 117, 922, 1283
BseDI CCNNGG 4 cut(s) 116, 549, 921, 1281
BseGI GGATG 4 cut(s) 162, 436, 586, 1301
BseJI GATNNNNATC 1 cut(s) 669
BseLI CCNNNNNNNGG 5 cut(s) 185, 382, 967, 1101, 1217
BseMI GCAATG 3 cut(s) 142, 684, 818
BseMII CTCAG 6 cut(s) 775, 1110, 1160, 1193, 1377, 1734
BseNI ACTGG 4 cut(s) 409, 715, 1433, 1500
BseRI GAGGAG 3 cut(s) 23, 401, 1074
BseSI GKGCMC 1 cut(s) 404
BseXI GCAGC 6 cut(s) 193, 250, 268, 529, 532, 676
Bsh1285I CGRYCG 1 cut(s) 516
BshFI GGCC 2 cut(s) 1286, 1402
BshNI GGYRCC 2 cut(s) 112, 241
BsiEI CGRYCG 1 cut(s) 516
BsiHKAI GWGCWC 1 cut(s) 404
BsiSI CCGG 3 cut(s) 168, 186, 1088
BslFI GGGAC 3 cut(s) 1117, 1150, 1325
BslI CCNNNNNNNGG 5 cut(s) 185, 382, 967, 1101, 1217
BsmAI GTCTC 4 cut(s) 503, 609, 860, 922
BsmBI CGTCTC 1 cut(s) 503
BsmFI GGGAC 3 cut(s) 1117, 1150, 1325
BsmI GAATGC 1 cut(s) 1578
BsnI GGCC 2 cut(s) 1286, 1402
Bsp1286I GDGCHC 1 cut(s) 404
Bsp143I GATC 5 cut(s) 73, 297, 390, 535, 670
Bsp19I CCATGG 1 cut(s) 549
BspACI CCGC 7 cut(s) 15, 83, 110, 227, 254, 1577, 1583
BspANI GGCC 2 cut(s) 1286, 1402
BspCNI CTCAG 6 cut(s) 774, 1109, 1159, 1192, 1378, 1735
BspLI GGNNCC 4 cut(s) 114, 243, 636, 1449
BspMAI CTGCAG 1 cut(s) 493
BspMI ACCTGC 2 cut(s) 958, 1549
BspPI GGATC 4 cut(s) 81, 292, 385, 665
BspT107I GGYRCC 2 cut(s) 112, 241
BsrBI CCGCTC 1 cut(s) 15
BsrDI GCAATG 3 cut(s) 142, 684, 818
BsrI ACTGG 4 cut(s) 409, 715, 1433, 1500
BssECI CCNNGG 4 cut(s) 116, 549, 921, 1281
BssMI GATC 5 cut(s) 73, 297, 390, 535, 670
BssNAI GTATAC 1 cut(s) 698
BssNI GRCGYC 1 cut(s) 1055
BssSI CACGAG 1 cut(s) 318
BssT1I CCWWGG 1 cut(s) 549
Bst1107I GTATAC 1 cut(s) 698
Bst2BI CACGAG 1 cut(s) 318
Bst2UI CCWGG 3 cut(s) 117, 922, 1283
BstACI GRCGYC 1 cut(s) 1055
BstBAI YACGTR 1 cut(s) 701
BstC8I GCNNGC 5 cut(s) 211, 231, 261, 1186, 1536
BstDEI CTNAG 8 cut(s) 761, 936, 1096, 1146, 1179, 1289, 1386, 1743
BstDSI CCRYGG 1 cut(s) 549
BstF5I GGATG 4 cut(s) 162, 436, 586, 1301
BstH2I RGCGCY 2 cut(s) 21, 125
BstHHI GCGC 2 cut(s) 20, 124
BstKTI GATC 5 cut(s) 76, 300, 393, 538, 673
BstMAI GTCTC 4 cut(s) 503, 609, 860, 922
BstMBI GATC 5 cut(s) 73, 297, 390, 535, 670
BstMCI CGRYCG 1 cut(s) 516
BstMWI GCNNNNNNNGC 6 cut(s) 49, 107, 121, 188, 1582, 1790
BstNI CCWGG 3 cut(s) 117, 922, 1283
BstNSI RCATGY 1 cut(s) 648
BstSCI CCNGG 4 cut(s) 115, 166, 920, 1281
BstSFI CTRYAG 2 cut(s) 489, 1228
BstSLI GKGCMC 1 cut(s) 404
BstV1I GCAGC 6 cut(s) 193, 250, 268, 529, 532, 676
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 3 cut(s) 297, 390, 670
BstYI RGATCY 3 cut(s) 297, 390, 670
BstZ17I GTATAC 1 cut(s) 698
BsuI GTATCC 1 cut(s) 886
BsuRI GGCC 2 cut(s) 1286, 1402
BtgI CCRYGG 1 cut(s) 549
BtgZI GCGATG 2 cut(s) 24, 206
BtsCI GGATG 4 cut(s) 162, 436, 586, 1301
BtsI GCAGTG 1 cut(s) 1195
BtsIMutI CAGTG 4 cut(s) 402, 1195, 1237, 1347
BveI ACCTGC 2 cut(s) 958, 1549
Cac8I GCNNGC 5 cut(s) 211, 231, 261, 1186, 1536
CfoI GCGC 2 cut(s) 20, 124
Cfr13I GGNCC 4 cut(s) 704, 1285, 1448, 1552
CseI GACGC 4 cut(s) 169, 171, 438, 1044
Csp6I GTAC 3 cut(s) 224, 358, 1691
CspCI CAANNNNNGTGG 2 cut(s) 981, 1016
CviAII CATG 5 cut(s) 550, 645, 797, 1597, 1714
CviQI GTAC 3 cut(s) 224, 358, 1691
DdeI CTNAG 8 cut(s) 761, 936, 1096, 1146, 1179, 1289, 1386, 1743
DpnI GATC 5 cut(s) 75, 299, 392, 537, 672
DpnII GATC 5 cut(s) 73, 297, 390, 535, 670
Eco130I CCWWGG 1 cut(s) 549
Eco47I GGWCC 3 cut(s) 704, 1448, 1552
Eco57I CTGAAG 2 cut(s) 650, 1173
EcoO109I RGGNCCY 1 cut(s) 1448
EcoRII CCWGG 3 cut(s) 115, 920, 1281
EcoT14I CCWWGG 1 cut(s) 549
EcoT22I ATGCAT 1 cut(s) 40
ErhI CCWWGG 1 cut(s) 549
Esp3I CGTCTC 1 cut(s) 503
FaeI CATG 5 cut(s) 553, 648, 800, 1600, 1717
FaqI GGGAC 3 cut(s) 1117, 1150, 1325
FatI CATG 5 cut(s) 549, 644, 796, 1596, 1713
FblI GTMKAC 1 cut(s) 697
Fnu4HI GCNGC 8 cut(s) 16, 207, 257, 264, 543, 546, 690, 1577
FokI GGATG 4 cut(s) 169, 423, 573, 1288
Fsp4HI GCNGC 8 cut(s) 16, 207, 257, 264, 543, 546, 690, 1577
FspBI CTAG 2 cut(s) 21, 867
GlaI GCGC 2 cut(s) 19, 123
GluI GCNGC 8 cut(s) 16, 207, 257, 264, 543, 546, 690, 1577
GsuI CTGGAG 2 cut(s) 904, 1029
HaeII RGCGCY 2 cut(s) 21, 125
HaeIII GGCC 2 cut(s) 1286, 1402
HapII CCGG 3 cut(s) 168, 186, 1088
HgaI GACGC 4 cut(s) 169, 171, 438, 1044
HhaI GCGC 2 cut(s) 20, 124
Hin1I GRCGYC 1 cut(s) 1055
Hin1II CATG 5 cut(s) 553, 648, 800, 1600, 1717
Hin6I GCGC 2 cut(s) 18, 122
HinP1I GCGC 2 cut(s) 18, 122
HincII GTYRAC 2 cut(s) 453, 1299
HindII GTYRAC 2 cut(s) 453, 1299
HinfI GANTC 6 cut(s) 86, 196, 344, 1105, 1382, 1739
HpaII CCGG 3 cut(s) 168, 186, 1088
HphI GGTGA 4 cut(s) 427, 473, 812, 1755
Hpy166II GTNNAC 7 cut(s) 402, 453, 698, 704, 794, 1202, 1299
Hpy188III TCNNGA 6 cut(s) 277, 777, 857, 1023, 1424, 1466
Hpy8I GTNNAC 7 cut(s) 402, 453, 698, 704, 794, 1202, 1299
HpyAV CCTTC 6 cut(s) 618, 625, 800, 1148, 1384, 1438
HpyCH4IV ACGT 1 cut(s) 700
HpyF10VI GCNNNNNNNGC 6 cut(s) 49, 107, 121, 188, 1582, 1790
HpyF3I CTNAG 8 cut(s) 761, 936, 1096, 1146, 1179, 1289, 1386, 1743
HpySE526I ACGT 1 cut(s) 700
Hsp92I GRCGYC 1 cut(s) 1055
Hsp92II CATG 5 cut(s) 553, 648, 800, 1600, 1717
HspAI GCGC 2 cut(s) 18, 122
Kzo9I GATC 5 cut(s) 73, 297, 390, 535, 670
LmnI GCTCC 5 cut(s) 129, 746, 1087, 1330, 1543
Lsp1109I GCAGC 6 cut(s) 193, 250, 268, 529, 532, 676
LweI GCATC 6 cut(s) 25, 47, 328, 655, 832, 853
MaeI CTAG 2 cut(s) 21, 867
MaeII ACGT 1 cut(s) 700
MaeIII GTNAC 6 cut(s) 710, 1111, 1258, 1428, 1761, 1786
MalI GATC 5 cut(s) 75, 299, 392, 537, 672
MbiI CCGCTC 1 cut(s) 15
MboI GATC 5 cut(s) 73, 297, 390, 535, 670
MboII GAAGA 7 cut(s) 339, 470, 569, 815, 872, 921, 1739
MfeI CAATTG 1 cut(s) 1320
MflI RGATCY 3 cut(s) 297, 390, 670
MhlI GDGCHC 1 cut(s) 404
MluCI AATT 7 cut(s) 324, 580, 844, 1320, 1370, 1469, 1616
MlyI GAGTC 4 cut(s) 95, 353, 1099, 1733
Mph1103I ATGCAT 1 cut(s) 40
MseI TTAA 5 cut(s) 311, 333, 1481, 1526, 1641
MspA1I CMGCKG 2 cut(s) 83, 101
MspI CCGG 3 cut(s) 168, 186, 1088
MspR9I CCNGG 4 cut(s) 117, 168, 922, 1283
MunI CAATTG 1 cut(s) 1320
Mva1269I GAATGC 1 cut(s) 1578
MvaI CCWGG 3 cut(s) 117, 922, 1283
MwoI GCNNNNNNNGC 6 cut(s) 49, 107, 121, 188, 1582, 1790
NciI CCSGG 1 cut(s) 168
NcoI CCATGG 1 cut(s) 549
NdeII GATC 5 cut(s) 73, 297, 390, 535, 670
NlaIII CATG 5 cut(s) 553, 648, 800, 1600, 1717
NlaIV GGNNCC 4 cut(s) 114, 243, 636, 1449
NmuCI GTSAC 4 cut(s) 710, 1111, 1258, 1761
NsiI ATGCAT 1 cut(s) 40
NspI RCATGY 1 cut(s) 648
PciI ACATGT 1 cut(s) 644
PctI GAATGC 1 cut(s) 1578
PfeI GAWTC 2 cut(s) 196, 1382
PflMI CCANNNNNTGG 1 cut(s) 1217
PkrI GCNGC 8 cut(s) 17, 208, 258, 265, 544, 547, 691, 1578
PleI GAGTC 4 cut(s) 94, 352, 1099, 1733
PpsI GAGTC 4 cut(s) 94, 352, 1099, 1733
Ppu21I YACGTR 1 cut(s) 701
PpuMI RGGWCCY 1 cut(s) 1448
PscI ACATGT 1 cut(s) 644
PshBI ATTAAT 1 cut(s) 333
Psp5II RGGWCCY 1 cut(s) 1448
Psp6I CCWGG 3 cut(s) 115, 920, 1281
PspGI CCWGG 3 cut(s) 115, 920, 1281
PspN4I GGNNCC 4 cut(s) 114, 243, 636, 1449
PspPI GGNCC 4 cut(s) 704, 1285, 1448, 1552
PspPPI RGGWCCY 1 cut(s) 1448
PstI CTGCAG 1 cut(s) 493
PsuI RGATCY 3 cut(s) 297, 390, 670
PvuII CAGCTG 1 cut(s) 101
RsaI GTAC 3 cut(s) 225, 359, 1692
RsaNI GTAC 3 cut(s) 224, 358, 1691
SaqAI TTAA 5 cut(s) 311, 333, 1481, 1526, 1641
SatI GCNGC 8 cut(s) 16, 207, 257, 264, 543, 546, 690, 1577
Sau3AI GATC 5 cut(s) 73, 297, 390, 535, 670
Sau96I GGNCC 4 cut(s) 704, 1285, 1448, 1552
SchI GAGTC 4 cut(s) 95, 353, 1099, 1733
ScrFI CCNGG 4 cut(s) 117, 168, 922, 1283
SduI GDGCHC 1 cut(s) 404
SfaNI GCATC 6 cut(s) 25, 47, 328, 655, 832, 853
SfcI CTRYAG 2 cut(s) 489, 1228
SinI GGWCC 3 cut(s) 704, 1448, 1552
SmlI CTYRAG 2 cut(s) 1131, 1254
SmoI CTYRAG 2 cut(s) 1131, 1254
Sse9I AATT 7 cut(s) 324, 580, 844, 1320, 1370, 1469, 1616
SsiI CCGC 7 cut(s) 15, 83, 110, 227, 254, 1577, 1583
SspI AATATT 1 cut(s) 784
SspMI CTAG 2 cut(s) 21, 867
StyD4I CCNGG 4 cut(s) 115, 166, 920, 1281
StyI CCWWGG 1 cut(s) 549
TaiI ACGT 1 cut(s) 703
TaqI TCGA 2 cut(s) 858, 1795
TaqII GACCGA 2 cut(s) 530, 1058
TasI AATT 7 cut(s) 324, 580, 844, 1320, 1370, 1469, 1616
TauI GCSGC 2 cut(s) 18, 1579
TfiI GAWTC 2 cut(s) 196, 1382
Tru1I TTAA 5 cut(s) 311, 333, 1481, 1526, 1641
Tru9I TTAA 5 cut(s) 311, 333, 1481, 1526, 1641
TscAI CASTG 4 cut(s) 409, 1195, 1237, 1354
TseFI GTSAC 4 cut(s) 710, 1111, 1258, 1761
TseI GCWGC 6 cut(s) 206, 256, 263, 542, 545, 689
Tsp45I GTSAC 4 cut(s) 710, 1111, 1258, 1761
TspDTI ATGAA 7 cut(s) 209, 470, 749, 753, 921, 1451, 1770
TspGWI ACGGA 3 cut(s) 20, 535, 1429
TspRI CASTG 4 cut(s) 409, 1195, 1237, 1354
Van91I CCANNNNNTGG 1 cut(s) 1217
VneI GTGCAC 1 cut(s) 400
VpaK11BI GGWCC 3 cut(s) 704, 1448, 1552
VspI ATTAAT 1 cut(s) 333
XapI RAATTY 3 cut(s) 580, 1370, 1616
XceI RCATGY 1 cut(s) 648
XcmI CCANNNNNNNNNTGG 2 cut(s) 401, 1048
XmiI GTMKAC 1 cut(s) 697
XspI CTAG 2 cut(s) 21, 867
Zsp2I ATGCAT 1 cut(s) 40
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.