Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001274

Physical Location & Seq

Genomic Coordinates Reverse (-)

12532919 .. 12543360

Gene Structure 10442 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00343240.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGATTGATAGTGGGCAAGCAGTTGATATAAAGGGAATATCTGAAAGATCTTTGATTAAGCATCTAAAGAAGTTATTCCTTTCATTAGAACTCAAGGAAAGTGATGGAGTTTTTGTACTGCCTTCAAATGTTCGTCCCACCTTGGAGGTTGTTGGGGTCATGATTCCAATGTCTGTAGATCTTAAATCTTCATTAAATGAGATGCATTCAGAACAACGGGATGAGGAATACAAACAAGTGGTTGGTGATGATAACCTGGCATCGCCATGTCCGGAGGATAATGTTGCTGGTCCTAACAGAAGGATAATTGGCCCTGCAATGCCATCGGCCGAGCTACTTGCTGCTGCAGCCAAACTGACAGAGGCACAGGCCGAGCTCAGGGAAGTGGAGTTGGAAGAGGATGCTGGAATGTTTATAGGGCCTCCACCACCTGCTGTTGTTGCTGAAGTTGAATCAGCTAATGAAGCTGAACGGTTTGAAGAGGTCACGAGGATCATAGATGCTGAGGAGAATAGTCCATATGATGTTCTAGGAGCAAACCAAAATATGGCTCCTGAGAACATAAAGAAAAGGAGTGAGGCTGTTGGAGGAGGGCAGAAAGGACAAGGCAAGTACTGGAAGATGTCTCTTTTGGTGCACCCTGATAAATGCTCACATCCTCAAGCTCAACAAGCATTTGTCAAGTTGAACAAAGCTTTTAAAGATTTACAAGATCCAGAAAAGCGGAAAGTGCTAGATGAGAAGATTAAGCTCAAGGAGGAGCATGAGAAATTTAAGTTGGAGTTGCGAGCAATGCGGGAGGCTGCACAATGGAGAAAGTTGCAAGCACCCAGAATGTTTCTATCACTTGTTTGTGCACTTAGCATAGCTCCTATTACTTTGACTTCTCGAACAACTGTATGTCTCTGCCAAATGAACTTGTTGGCAGGAATATCCATGGAGGGTGATGATGAGCTATTGGCAGACATGGATGTTAAAGTGGCACCACAAAGAGATGAGTGGATGACAACGCTTCCTCCTGAGAGGAGACAACTTGCATTTGAGATTCTAAAGGAATGTGCAGCTTGGAGTACAGCTGCAAGACAATCACAGTTGCCTGGTGGTATGCCTACGCAATCAACAAAGTTTAGCAGCACCGTTAAAGAAGGACGTGGTGATACTAGTGCATGGACTGATACCCCTTCTGACAGAGCCCAGAAAGCTAAGATGGATTACTTAGAAGCATATAATGAGGCTGCATCACTTGCTTCAAATGATGAGAAGAAACTGAATAGTTCAGATGCAGATTTGGTGGACAGATACAACAAAGAAAAACGATCAAAATCTTTGGTACAAAAACACCAAGAGACTGCAAGCCGCCCGAAGAGAAAATCCAAGCAACCGTTGGAGAAGGAGAAGAAGGAAGAATGGGTGGGAAAACATCCTTGGAAGCCTTGGGACCGTGAAAAGGATTTGACAGGTGGTAGGCAAAGTGTAAAATTGGATTCAGAAAACATGGCTCAAGGTTTAACGTCTCGGTTTTCTGCGGGCTCCTTTCAGAGAAACTTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001664 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0050780

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3752 DnaJ

Protein Analysis

517

Amino Acids

57.83

Weight (kDa)

5.89

Isoelectric Point (pI)

46.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	204 - 246	5.6e-10	DnaJ domain
DUF3752	PF12572	371 - 508	1.6e-27	Protein of unknown function (DUF3752)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65280 AT1G65280
fragaria_vesca	FvH4_3g44892 FvH4_3g44892 FvH4_3g44892 FvH4_3g44931 FvH4_3g44932 FvH4_3g44960 FvH4_3g44966 FvH4_4g06470
malus_domestica	MD04G1003500.v1.1
prunus_persica	Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1
pyrus_communis	pycom04g00360
rosa_chinensis	RchiOBHm_Chr4g0398261 RchiOBHm_Chr5g0081671 RchiOBHm_Chr5g0082081 RchiOBHm_Chr5g0082701
rosa_laevigata	RLG00000036957 RLG00000036962 RLG00000036979
rosa_multiflora	Rmu_co8467303.1_g000001 Rmu_sc0000303.1_g000009 Rmu_sc0001687.1_g000002 Rmu_sc0002176.1_g000036 Rmu_sc0002723.1_g000006 Rmu_sc0002723.1_g000051 Rmu_sc0002723.1_g000052 Rmu_sc0004094.1_g000006 Rmu_sc0004835.1_g000037 Rmu_sc0012399.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343240
rosa_rugosa	Rorug04G0007200 Rorug04G0007300 Rorug05G0477600
rosa_samantha	Rh4AG084700 Rh4BG082100 Rh4CG092100 Rh4DG077200 Rh5AG529100 Rh5BG554300 Rh5BG554800 Rh5BG555700 Rh5CG577200 Rh5CG577700 Rh5CG578400 Rh5DG563900 Rh5DG564100 Rh5DG565000 Rh5DG565100
rosa_wichuraiana	Rw0G022970 Rw4G007040 Rw5G049400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	439
Acc36I	ACCTGC	1 cut(s)	439
AccB1I	GGYRCC	1 cut(s)	982
AccB7I	CCANNNNNTGG	1 cut(s)	547
AccIII	TCCGGA	1 cut(s)	271
AciI	CCGC	4 cut(s)	724, 796, 1357, 1526
AclWI	GGATC	2 cut(s)	500, 707
AcoI	YGGCCR	1 cut(s)	327
AcsI	RAATTY	1 cut(s)	770
AcuI	CTGAAG	1 cut(s)	465
AfaI	GTAC	4 cut(s)	117, 614, 1072, 1332
AfiI	CCNNNNNNNGG	3 cut(s)	378, 547, 1447
AgsI	TTSAA	5 cut(s)	126, 452, 479, 688, 1251
AhlI	ACTAGT	1 cut(s)	1160
AjiI	CACGTC	1 cut(s)	1151
AjnI	CCWGG	2 cut(s)	255, 1096
AjuI	GAANNNNNNNTTGG	4 cut(s)	761, 793, 1408, 1440
Alw21I	GWGCWC	3 cut(s)	378, 639, 859
Alw26I	GTCTC	5 cut(s)	630, 908, 1021, 1340, 1518
Alw44I	GTGCAC	2 cut(s)	635, 855
AlwI	GGATC	2 cut(s)	500, 707
Aor13HI	TCCGGA	1 cut(s)	271
AoxI	GGCC	4 cut(s)	310, 327, 369, 419
ApaLI	GTGCAC	2 cut(s)	635, 855
ApeKI	GCWGC	8 cut(s)	341, 344, 347, 803, 1061, 1076, 1131, 1235
ApoI	RAATTY	1 cut(s)	770
Asp700I	GAANNNNTTC	1 cut(s)	74
AspS9I	GGNCC	4 cut(s)	290, 311, 419, 1438
AsuHPI	GGTGA	3 cut(s)	257, 956, 1166
AvaII	GGWCC	2 cut(s)	290, 1438
BaeGI	GKGCMC	2 cut(s)	639, 859
BanI	GGYRCC	1 cut(s)	982
BanII	GRGCYC	3 cut(s)	378, 1195, 1532
BauI	CACGAG	1 cut(s)	487
Bbv12I	GWGCWC	3 cut(s)	378, 639, 859
BbvCI	CCTCAGC	1 cut(s)	504
BbvI	GCAGC	8 cut(s)	328, 331, 359, 790, 1063, 1073, 1143, 1222
BccI	CCATC	3 cut(s)	98, 331, 1201
BcgI	CGANNNNNNTGC	4 cut(s)	306, 320, 340, 354
BciT130I	CCWGG	2 cut(s)	257, 1098
BcoDI	GTCTC	5 cut(s)	630, 908, 1021, 1340, 1518
BcuI	ACTAGT	1 cut(s)	1160
BfaI	CTAG	3 cut(s)	530, 734, 1161
BfmI	CTRYAG	2 cut(s)	174, 345
BfuAI	ACCTGC	1 cut(s)	439
BglII	AGATCT	2 cut(s)	47, 178
BisI	GCNGC	9 cut(s)	342, 345, 348, 804, 1062, 1077, 1132, 1236, 1357
BlsI	GCNGC	9 cut(s)	343, 346, 349, 805, 1063, 1078, 1133, 1237, 1358
BmcAI	AGTACT	1 cut(s)	614
Bme1390I	CCNGG	2 cut(s)	257, 1098
Bme18I	GGWCC	2 cut(s)	290, 1438
BmgBI	CACGTC	1 cut(s)	1151
BmgT120I	GGNCC	4 cut(s)	290, 311, 419, 1438
BmiI	GGNNCC	4 cut(s)	552, 984, 1439, 1531
BmrFI	CCNGG	2 cut(s)	257, 1098
BmsI	GCATC	7 cut(s)	70, 192, 269, 391, 490, 1247, 1270
Bpu10I	CCTNAGC	2 cut(s)	377, 504
BpuEI	CTTGAG	4 cut(s)	77, 645, 737, 1485
BsaBI	GATNNNNATC	1 cut(s)	1321
BsaJI	CCNNGG	4 cut(s)	141, 936, 1424, 1433
BsaWI	WCCGGW	1 cut(s)	271
BsaXI	ACNNNNNCTCC	4 cut(s)	99, 129, 1000, 1030
Bsc4I	CCNNNNNNNGG	3 cut(s)	378, 547, 1447
Bse1I	ACTGG	1 cut(s)	620
Bse3DI	GCAATG	2 cut(s)	324, 798
Bse8I	GATNNNNATC	1 cut(s)	1321
BseAI	TCCGGA	1 cut(s)	271
BseBI	CCWGG	2 cut(s)	257, 1098
BseDI	CCNNGG	4 cut(s)	141, 936, 1424, 1433
BseGI	GGATG	6 cut(s)	226, 406, 655, 976, 1008, 1420
BseJI	GATNNNNATC	1 cut(s)	1321
BseLI	CCNNNNNNNGG	3 cut(s)	378, 547, 1447
BseMI	GCAATG	2 cut(s)	324, 798
BseMII	CTCAG	4 cut(s)	391, 495, 546, 1011
BseNI	ACTGG	1 cut(s)	620
BseRI	GAGGAG	4 cut(s)	521, 603, 773, 1039
BseSI	GKGCMC	2 cut(s)	639, 859
BseX3I	CGGCCG	1 cut(s)	327
BseXI	GCAGC	8 cut(s)	328, 331, 359, 790, 1063, 1073, 1143, 1222
BsgI	GTGCAG	2 cut(s)	789, 1080
Bsh1285I	CGRYCG	1 cut(s)	330
BshFI	GGCC	4 cut(s)	312, 329, 371, 421
BshNI	GGYRCC	1 cut(s)	982
BsiEI	CGRYCG	1 cut(s)	330
BsiHKAI	GWGCWC	3 cut(s)	378, 639, 859
BsiSI	CCGG	1 cut(s)	272
BslFI	GGGAC	2 cut(s)	120, 1451
BslI	CCNNNNNNNGG	3 cut(s)	378, 547, 1447
BsmAI	GTCTC	5 cut(s)	630, 908, 1021, 1340, 1518
BsmBI	CGTCTC	1 cut(s)	1518
BsmFI	GGGAC	2 cut(s)	120, 1451
BsmI	GAATGC	1 cut(s)	205
BsnI	GGCC	4 cut(s)	312, 329, 371, 421
Bsp1286I	GDGCHC	5 cut(s)	378, 639, 859, 1195, 1532
Bsp13I	TCCGGA	1 cut(s)	271
Bsp143I	GATC	5 cut(s)	47, 178, 492, 712, 1316
Bsp19I	CCATGG	1 cut(s)	936
BspACI	CCGC	4 cut(s)	724, 796, 1357, 1526
BspANI	GGCC	4 cut(s)	312, 329, 371, 421
BspCNI	CTCAG	4 cut(s)	390, 496, 547, 1012
BspEI	TCCGGA	1 cut(s)	271
BspHI	TCATGA	1 cut(s)	159
BspLI	GGNNCC	4 cut(s)	552, 984, 1439, 1531
BspMAI	CTGCAG	1 cut(s)	349
BspMI	ACCTGC	1 cut(s)	439
BspPI	GGATC	2 cut(s)	500, 707
BspT107I	GGYRCC	1 cut(s)	982
BsrDI	GCAATG	2 cut(s)	324, 798
BsrI	ACTGG	1 cut(s)	620
BssECI	CCNNGG	4 cut(s)	141, 936, 1424, 1433
BssMI	GATC	5 cut(s)	47, 178, 492, 712, 1316
BssSI	CACGAG	1 cut(s)	487
BssT1I	CCWWGG	4 cut(s)	141, 936, 1424, 1433
Bst2BI	CACGAG	1 cut(s)	487
Bst2UI	CCWGG	2 cut(s)	257, 1098
Bst4CI	ACNGT	6 cut(s)	474, 898, 1092, 1138, 1383, 1442
Bst6I	CTCTTC	3 cut(s)	390, 474, 1358
BstAPI	GCANNNNNTGC	1 cut(s)	1244
BstC8I	GCNNGC	5 cut(s)	18, 789, 825, 1354, 1528
BstDEI	CTNAG	7 cut(s)	377, 504, 555, 860, 1020, 1203, 1216
BstDSI	CCRYGG	1 cut(s)	936
BstF5I	GGATG	6 cut(s)	226, 406, 655, 976, 1008, 1420
BstKTI	GATC	5 cut(s)	50, 181, 495, 715, 1319
BstMAI	GTCTC	5 cut(s)	630, 908, 1021, 1340, 1518
BstMBI	GATC	5 cut(s)	47, 178, 492, 712, 1316
BstMCI	CGRYCG	1 cut(s)	330
BstMWI	GCNNNNNNNGC	8 cut(s)	347, 440, 464, 671, 730, 793, 1199, 1244
BstNI	CCWGG	2 cut(s)	257, 1098
BstSCI	CCNGG	2 cut(s)	255, 1096
BstSFI	CTRYAG	2 cut(s)	174, 345
BstSLI	GKGCMC	2 cut(s)	639, 859
BstV1I	GCAGC	8 cut(s)	328, 331, 359, 790, 1063, 1073, 1143, 1222
BstX2I	RGATCY	3 cut(s)	47, 178, 712
BstYI	RGATCY	3 cut(s)	47, 178, 712
BstZI	CGGCCG	1 cut(s)	327
BsuRI	GGCC	4 cut(s)	312, 329, 371, 421
BtgI	CCRYGG	1 cut(s)	936
BtgZI	GCGATG	1 cut(s)	246
BtrI	CACGTC	1 cut(s)	1151
BtsCI	GGATG	6 cut(s)	226, 406, 655, 976, 1008, 1420
BveI	ACCTGC	1 cut(s)	439
Cac8I	GCNNGC	5 cut(s)	18, 789, 825, 1354, 1528
CciI	TCATGA	1 cut(s)	159
Cfr13I	GGNCC	4 cut(s)	290, 311, 419, 1438
Csp6I	GTAC	4 cut(s)	116, 613, 1071, 1331
CviAII	CATG	7 cut(s)	160, 267, 764, 937, 967, 1167, 1495
CviQI	GTAC	4 cut(s)	116, 613, 1071, 1331
DdeI	CTNAG	7 cut(s)	377, 504, 555, 860, 1020, 1203, 1216
DpnI	GATC	5 cut(s)	49, 180, 494, 714, 1318
DpnII	GATC	5 cut(s)	47, 178, 492, 712, 1316
DraI	TTTAAA	1 cut(s)	700
EaeI	YGGCCR	1 cut(s)	327
EagI	CGGCCG	1 cut(s)	327
Eam1104I	CTCTTC	3 cut(s)	390, 474, 1358
EarI	CTCTTC	3 cut(s)	390, 474, 1358
Ecl136II	GAGCTC	1 cut(s)	376
EclXI	CGGCCG	1 cut(s)	327
Eco130I	CCWWGG	4 cut(s)	141, 936, 1424, 1433
Eco24I	GRGCYC	3 cut(s)	378, 1195, 1532
Eco47I	GGWCC	2 cut(s)	290, 1438
Eco52I	CGGCCG	1 cut(s)	327
Eco53kI	GAGCTC	1 cut(s)	376
Eco57I	CTGAAG	1 cut(s)	465
EcoICRI	GAGCTC	1 cut(s)	376
EcoO109I	RGGNCCY	1 cut(s)	419
EcoRII	CCWGG	2 cut(s)	255, 1096
EcoT14I	CCWWGG	4 cut(s)	141, 936, 1424, 1433
EcoT22I	ATGCAT	1 cut(s)	207
EcoT38I	GRGCYC	3 cut(s)	378, 1195, 1532
ErhI	CCWWGG	4 cut(s)	141, 936, 1424, 1433
Esp3I	CGTCTC	1 cut(s)	1518
FaeI	CATG	7 cut(s)	163, 270, 767, 940, 970, 1170, 1498
FaqI	GGGAC	2 cut(s)	120, 1451
FatI	CATG	7 cut(s)	159, 266, 763, 936, 966, 1166, 1494
FauI	CCCGC	2 cut(s)	789, 1519
FauNDI	CATATG	1 cut(s)	520
Fnu4HI	GCNGC	9 cut(s)	342, 345, 348, 804, 1062, 1077, 1132, 1236, 1357
FokI	GGATG	6 cut(s)	233, 413, 642, 983, 1015, 1407
FriOI	GRGCYC	3 cut(s)	378, 1195, 1532
Fsp4HI	GCNGC	9 cut(s)	342, 345, 348, 804, 1062, 1077, 1132, 1236, 1357
FspBI	CTAG	3 cut(s)	530, 734, 1161
GluI	GCNGC	9 cut(s)	342, 345, 348, 804, 1062, 1077, 1132, 1236, 1357
HaeIII	GGCC	4 cut(s)	312, 329, 371, 421
HapII	CCGG	1 cut(s)	272
Hin1II	CATG	7 cut(s)	163, 270, 767, 940, 970, 1170, 1498
HindIII	AAGCTT	1 cut(s)	693
HinfI	GANTC	4 cut(s)	163, 452, 1045, 1484
HpaII	CCGG	1 cut(s)	272
HphI	GGTGA	3 cut(s)	257, 956, 1166
Hpy166II	GTNNAC	3 cut(s)	637, 857, 1294
Hpy188I	TCNGA	6 cut(s)	43, 211, 1186, 1279, 1489, 1539
Hpy188III	TCNNGA	7 cut(s)	160, 272, 487, 554, 716, 888, 1019
Hpy8I	GTNNAC	3 cut(s)	637, 857, 1294
HpyAV	CCTTC	6 cut(s)	132, 294, 1139, 1191, 1384, 1393
HpyCH4III	ACNGT	6 cut(s)	474, 898, 1092, 1138, 1383, 1442
HpyCH4IV	ACGT	2 cut(s)	1150, 1511
HpyF10VI	GCNNNNNNNGC	8 cut(s)	347, 440, 464, 671, 730, 793, 1199, 1244
HpyF3I	CTNAG	7 cut(s)	377, 504, 555, 860, 1020, 1203, 1216
HpySE526I	ACGT	2 cut(s)	1150, 1511
Hsp92II	CATG	7 cut(s)	163, 270, 767, 940, 970, 1170, 1498
Kpn2I	TCCGGA	1 cut(s)	271
Kzo9I	GATC	5 cut(s)	47, 178, 492, 712, 1316
LmnI	GCTCC	5 cut(s)	533, 556, 760, 874, 1535
Lsp1109I	GCAGC	8 cut(s)	328, 331, 359, 790, 1063, 1073, 1143, 1222
LweI	GCATC	7 cut(s)	70, 192, 269, 391, 490, 1247, 1270
MaeI	CTAG	3 cut(s)	530, 734, 1161
MaeII	ACGT	2 cut(s)	1150, 1511
MaeIII	GTNAC	1 cut(s)	484
MalI	GATC	5 cut(s)	49, 180, 494, 714, 1318
MboI	GATC	5 cut(s)	47, 178, 492, 712, 1316
MboII	GAAGA	9 cut(s)	180, 407, 491, 631, 754, 1273, 1375, 1408, 1415
MflI	RGATCY	3 cut(s)	47, 178, 712
MhlI	GDGCHC	5 cut(s)	378, 639, 859, 1195, 1532
MluCI	AATT	3 cut(s)	306, 770, 1478
MmeI	TCCRAC	4 cut(s)	372, 565, 759, 1365
Mph1103I	ATGCAT	1 cut(s)	207
MroI	TCCGGA	1 cut(s)	271
MroXI	GAANNNNTTC	1 cut(s)	74
MseI	TTAA	9 cut(s)	57, 183, 194, 699, 747, 774, 975, 1140, 1508
MslI	CAYNNNNRTG	1 cut(s)	265
MspA1I	CMGCKG	1 cut(s)	1076
MspI	CCGG	1 cut(s)	272
MspR9I	CCNGG	2 cut(s)	257, 1098
Mva1269I	GAATGC	1 cut(s)	205
MvaI	CCWGG	2 cut(s)	257, 1098
MwoI	GCNNNNNNNGC	8 cut(s)	347, 440, 464, 671, 730, 793, 1199, 1244
NcoI	CCATGG	1 cut(s)	936
NdeI	CATATG	1 cut(s)	520
NdeII	GATC	5 cut(s)	47, 178, 492, 712, 1316
NlaIII	CATG	7 cut(s)	163, 270, 767, 940, 970, 1170, 1498
NlaIV	GGNNCC	4 cut(s)	552, 984, 1439, 1531
NmeAIII	GCCGAG	2 cut(s)	355, 397
NmuCI	GTSAC	1 cut(s)	484
NsiI	ATGCAT	1 cut(s)	207
PagI	TCATGA	1 cut(s)	159
PaqCI	CACCTGC	1 cut(s)	439
PctI	GAATGC	1 cut(s)	205
PdmI	GAANNNNTTC	1 cut(s)	74
PfeI	GAWTC	4 cut(s)	163, 452, 1045, 1484
PflMI	CCANNNNNTGG	1 cut(s)	547
PkrI	GCNGC	9 cut(s)	343, 346, 349, 805, 1063, 1078, 1133, 1237, 1358
Psp124BI	GAGCTC	1 cut(s)	378
Psp6I	CCWGG	2 cut(s)	255, 1096
PspGI	CCWGG	2 cut(s)	255, 1096
PspN4I	GGNNCC	4 cut(s)	552, 984, 1439, 1531
PspPI	GGNCC	4 cut(s)	290, 311, 419, 1438
PstI	CTGCAG	1 cut(s)	349
PsuI	RGATCY	3 cut(s)	47, 178, 712
PvuII	CAGCTG	1 cut(s)	1076
RsaI	GTAC	4 cut(s)	117, 614, 1072, 1332
RsaNI	GTAC	4 cut(s)	116, 613, 1071, 1331
RseI	CAYNNNNRTG	1 cut(s)	265
SacI	GAGCTC	1 cut(s)	378
SaqAI	TTAA	9 cut(s)	57, 183, 194, 699, 747, 774, 975, 1140, 1508
SatI	GCNGC	9 cut(s)	342, 345, 348, 804, 1062, 1077, 1132, 1236, 1357
Sau3AI	GATC	5 cut(s)	47, 178, 492, 712, 1316
Sau96I	GGNCC	4 cut(s)	290, 311, 419, 1438
ScaI	AGTACT	1 cut(s)	614
ScrFI	CCNGG	2 cut(s)	257, 1098
SduI	GDGCHC	5 cut(s)	378, 639, 859, 1195, 1532
SfaNI	GCATC	7 cut(s)	70, 192, 269, 391, 490, 1247, 1270
SfcI	CTRYAG	2 cut(s)	174, 345
SinI	GGWCC	2 cut(s)	290, 1438
SmiMI	CAYNNNNRTG	1 cut(s)	265
SmlI	CTYRAG	4 cut(s)	92, 660, 752, 1500
SmoI	CTYRAG	4 cut(s)	92, 660, 752, 1500
SpeI	ACTAGT	1 cut(s)	1160
Sse9I	AATT	3 cut(s)	306, 770, 1478
SsiI	CCGC	4 cut(s)	724, 796, 1357, 1526
SspMI	CTAG	3 cut(s)	530, 734, 1161
SstI	GAGCTC	1 cut(s)	378
StyD4I	CCNGG	2 cut(s)	255, 1096
StyI	CCWWGG	4 cut(s)	141, 936, 1424, 1433
TaaI	ACNGT	6 cut(s)	474, 898, 1092, 1138, 1383, 1442
TaiI	ACGT	2 cut(s)	1153, 1514
TaqI	TCGA	1 cut(s)	889
TasI	AATT	3 cut(s)	306, 770, 1478
TatI	WGTACW	3 cut(s)	115, 612, 1070
TauI	GCSGC	1 cut(s)	1359
TfiI	GAWTC	4 cut(s)	163, 452, 1045, 1484
Tru1I	TTAA	9 cut(s)	57, 183, 194, 699, 747, 774, 975, 1140, 1508
Tru9I	TTAA	9 cut(s)	57, 183, 194, 699, 747, 774, 975, 1140, 1508
TseFI	GTSAC	1 cut(s)	484
TseI	GCWGC	8 cut(s)	341, 344, 347, 803, 1061, 1076, 1131, 1235
Tsp45I	GTSAC	1 cut(s)	484
TspDTI	ATGAA	4 cut(s)	72, 180, 477, 929
Van91I	CCANNNNNTGG	1 cut(s)	547
VneI	GTGCAC	2 cut(s)	635, 855
VpaK11BI	GGWCC	2 cut(s)	290, 1438
XapI	RAATTY	1 cut(s)	770
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1381
XmnI	GAANNNNTTC	1 cut(s)	74
XspI	CTAG	3 cut(s)	530, 734, 1161
ZrmI	AGTACT	1 cut(s)	614
Zsp2I	ATGCAT	1 cut(s)	207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.