Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001274

Physical Location & Seq

Genomic Coordinates Reverse (-)

16634933 .. 16648609

Gene Structure 13677 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG092100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGAATTGTGGATGGGCTAGTTGGACCCTAGGTGTGGGCCTCAAATTGTCCAATATTGATAATATTGGGCCTTTAGCGTGTACCAAAACCCAAAACTTGGATTTATTAGAGGTCTGGTTTGAATGGTGCTCTGAATTTGATTTTGATTGCAAAATGGGGAGTAAAAGCAAGAGGAAGAAGCATTTGCCGGAAACGAGCGACGACGATTCACCGTCGTCGTCTCCTTCAAACTCCGACGAATCCGACCGGTCCTCGAAACGGCGTCGTCGCCACCGTCACAGAAGCGATGACGGCTCCAGAAGAGAGAAGGCAAGGAGAAGGGAGAGGAGAGAGAAACGGCGAAGTAGTAAGAGAGAGGCGAGGCGGAGCAAATCGAAGACGAAGAAGAAGAAGAGGGACTATGACTCCGGTTCGGGGTCTTCGAGTGGTGGCGGTGATTCTGAGCCGGAGAGGAGCCGGGTTGAGCCCCGAGAGGTCTTGCGAGACTTGTTCAGTGAATTTCCTAATGTTGGCGACGATTTGAAGCAGCTTTTGCAAATGATTGATAGTGGGCAAGCAGTTGATATAAAGGGAATTTCTGAAAGATCTTTGATTAAGCATCTAAAGAAGTTATTCCTTTCATTAGAACTGAAGGAAAGTGATGGAGTTTTTGTACTGCCTTCAAATGTTCGTCCCACCTTGGAGGTTGTTGGGGTCATGATTCCAATGTCTGTAGATCTTAAATCTTCATTAAATGAGATGCATTCAGAACAACGGGATGAGGAATACAAACAAGTGGTTGGTGATGATAATATGGCATCGCCATGTCCGGAGGATAATGTTGCTGGTCCTAACAGAAGGATAATTGGCCCTGCAATGCCATCGGCCGAGCTACTTGCTGCTGCAGCCAAACTGACAGAGGCACAGGCCGAGCTCAGGGAAGTGGAGTTGGAAGAGGATGCTGGAATGTTTATAGGGCCTCCACCACCTGCTGTTGTTGCTGAAGTTGAATCAGCTAATGAAGCTGAACGGTTTGAAGAGGTCACGAGGATCATAGATGCTGAGGAGAATAGTCCATATGATGTTCTAGGAGCAAACCAAAATATGGCTCCTGAGAACATAAAAAAAAGGTACTGGAAGATGTCTCTTTTGGTGCACCCTGATAAATGCTCACATCCTCAAGCTCAACAAGCATTTGTCAAGTTGAACAAAGCTTTTAAAGATTTACAAGATCCAGAAAAGCGGAAAGTGCTAGATGAGAAGATTAAACTCAAGGAGGAGCATGAGAAATTTAAGGTGGAGTTGCGAGCAATGCGGGAGGCTGCACAATGGAGAAAGTTACAAGGAATATCCATGGAGGGTGATGATGAGCTATTGGCAGACATGGATGTTAAAGTGGCACCACAAAGAGATGAGTGGATGACAACGCTTCCTCCTGAGAGAAGACCTGGTGGTATGCCTACGCAATCAACAAAGTTTAGCAGCACTGTTAAAGAAGGACGTGGTGATACTAGTGCATGGACTGATACCCCTTCTGACAGAGCCCAGAAAGCTAAGATGGATTACTTAGAAGCATATAATGAGGCTGCATCACTTGCTTCAAATGAGGAGAAGAAAATGAATAGTTCAGATGCAGATTTGGTGGACAGATACAACAAAGAAAAACGATCAAAATCATTGGTACAAAAACACCAAGAGACTGCAAGCCTCCCGAAGAGAAAATCCAAGCAACCGTTGGAGAAGGAGAAGAAGGAAGAATGGGTGGGAAAACATCCTTGGAAGCCTTGGGATCGTGAAAAGGATTTGACAGGCGGTAGGCAAAGTGTAAAATTGGATTCAGAAAACATGGCTCAAGGTTTAACGTCTCGGTTTTCTGCGGGCTCGTTTCAGAGAAACTTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001664 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0050780

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3752 DnaJ

Protein Analysis

627

Amino Acids

71.21

Weight (kDa)

7.99

Isoelectric Point (pI)

63.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	352 - 412	4.7e-17	DnaJ domain
DUF3752	PF12572	471 - 618	8.1e-28	Protein of unknown function (DUF3752)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65280 AT1G65280
fragaria_vesca	FvH4_3g44892 FvH4_3g44892 FvH4_3g44892 FvH4_3g44931 FvH4_3g44932 FvH4_3g44960 FvH4_3g44966 FvH4_4g06470
malus_domestica	MD04G1003500.v1.1
prunus_persica	Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1
pyrus_communis	pycom04g00360
rosa_chinensis	RchiOBHm_Chr4g0398261 RchiOBHm_Chr5g0081671 RchiOBHm_Chr5g0082081 RchiOBHm_Chr5g0082701
rosa_laevigata	RLG00000036957 RLG00000036962 RLG00000036979
rosa_multiflora	Rmu_co8467303.1_g000001 Rmu_sc0000303.1_g000009 Rmu_sc0001687.1_g000002 Rmu_sc0002176.1_g000036 Rmu_sc0002723.1_g000006 Rmu_sc0002723.1_g000051 Rmu_sc0002723.1_g000052 Rmu_sc0004094.1_g000006 Rmu_sc0004835.1_g000037 Rmu_sc0012399.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343240
rosa_rugosa	Rorug04G0007200 Rorug04G0007300 Rorug05G0477600
rosa_samantha	Rh4AG084700 Rh4BG082100 Rh4CG092100 Rh4DG077200 Rh5AG529100 Rh5BG554300 Rh5BG554800 Rh5BG555700 Rh5CG577200 Rh5CG577700 Rh5CG578400 Rh5DG563900 Rh5DG564100 Rh5DG565000 Rh5DG565100
rosa_wichuraiana	Rw0G022970 Rw4G007040 Rw5G049400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	976
Acc36I	ACCTGC	1 cut(s)	976
AccB1I	GGYRCC	1 cut(s)	1378
AccB7I	CCANNNNNTGG	2 cut(s)	97, 1084
AccIII	TCCGGA	1 cut(s)	808
AciI	CCGC	6 cut(s)	364, 432, 1222, 1294, 1791, 1856
AclWI	GGATC	3 cut(s)	1037, 1205, 1776
AcoI	YGGCCR	1 cut(s)	864
AcsI	RAATTY	4 cut(s)	134, 497, 573, 1268
AcuI	CTGAAG	2 cut(s)	650, 1002
AcyI	GRCGYC	1 cut(s)	262
AfaI	GTAC	4 cut(s)	82, 654, 1112, 1662
AfiI	CCNNNNNNNGG	7 cut(s)	34, 97, 258, 414, 509, 915, 1084
AgeI	ACCGGT	1 cut(s)	246
AgsI	TTSAA	8 cut(s)	122, 228, 523, 663, 989, 1016, 1186, 1581
AhlI	ACTAGT	1 cut(s)	1490
AjiI	CACGTC	1 cut(s)	1481
AjnI	CCWGG	1 cut(s)	1426
AjuI	GAANNNNNNNTTGG	2 cut(s)	1738, 1770
AluBI	AGCT	9 cut(s)	529, 871, 913, 995, 1004, 1163, 1193, 1351, 1532
AluI	AGCT	9 cut(s)	529, 871, 913, 995, 1004, 1163, 1193, 1351, 1532
Alw21I	GWGCWC	3 cut(s)	131, 915, 1137
Alw26I	GTCTC	5 cut(s)	225, 477, 1128, 1670, 1848
Alw44I	GTGCAC	1 cut(s)	1133
AlwI	GGATC	3 cut(s)	1037, 1205, 1776
Ama87I	CYCGRG	1 cut(s)	468
Aor13HI	TCCGGA	1 cut(s)	808
AoxI	GGCC	6 cut(s)	37, 68, 847, 864, 906, 956
ApaLI	GTGCAC	1 cut(s)	1133
ApeKI	GCWGC	7 cut(s)	526, 878, 881, 884, 1301, 1461, 1565
ApoI	RAATTY	4 cut(s)	134, 497, 573, 1268
AsiGI	ACCGGT	1 cut(s)	246
Asp700I	GAANNNNTTC	1 cut(s)	611
AspA2I	CCTAGG	1 cut(s)	28
AspS9I	GGNCC	7 cut(s)	24, 37, 68, 249, 827, 848, 956
AsuC2I	CCSGG	1 cut(s)	458
AsuHPI	GGTGA	5 cut(s)	201, 446, 794, 1352, 1496
AvaI	CYCGRG	1 cut(s)	468
AvaII	GGWCC	3 cut(s)	24, 249, 827
AvrII	CCTAGG	1 cut(s)	28
BaeGI	GKGCMC	1 cut(s)	1137
BanI	GGYRCC	1 cut(s)	1378
BanII	GRGCYC	4 cut(s)	468, 915, 1525, 1862
BauI	CACGAG	1 cut(s)	1024
BbsI	GAAGAC	3 cut(s)	383, 411, 1429
Bbv12I	GWGCWC	3 cut(s)	131, 915, 1137
BbvCI	CCTCAGC	1 cut(s)	1041
BbvI	GCAGC	7 cut(s)	538, 865, 868, 896, 1288, 1473, 1552
BccI	CCATC	4 cut(s)	6, 635, 868, 1531
BceAI	ACGGC	3 cut(s)	275, 307, 353
BcgI	CGANNNNNNTGC	4 cut(s)	843, 857, 877, 891
BciT130I	CCWGG	1 cut(s)	1428
BcnI	CCSGG	1 cut(s)	458
BcoDI	GTCTC	5 cut(s)	225, 477, 1128, 1670, 1848
BcuI	ACTAGT	1 cut(s)	1490
BfaI	CTAG	5 cut(s)	18, 29, 1067, 1232, 1491
BfmI	CTRYAG	2 cut(s)	711, 882
BfuAI	ACCTGC	1 cut(s)	976
BglII	AGATCT	2 cut(s)	584, 715
BisI	GCNGC	7 cut(s)	527, 879, 882, 885, 1302, 1462, 1566
BlnI	CCTAGG	1 cut(s)	28
BlsI	GCNGC	7 cut(s)	528, 880, 883, 886, 1303, 1463, 1567
Bme1390I	CCNGG	2 cut(s)	458, 1428
Bme18I	GGWCC	3 cut(s)	24, 249, 827
BmeT110I	CYCGRG	1 cut(s)	468
BmgBI	CACGTC	1 cut(s)	1481
BmgT120I	GGNCC	7 cut(s)	24, 37, 68, 249, 827, 848, 956
BmiI	GGNNCC	5 cut(s)	26, 295, 455, 1089, 1380
BmrFI	CCNGG	2 cut(s)	458, 1428
BmsI	GCATC	7 cut(s)	607, 729, 806, 928, 1027, 1577, 1600
BpiI	GAAGAC	3 cut(s)	383, 411, 1429
BpmI	CTGGAG	1 cut(s)	280
Bpu10I	CCTNAGC	2 cut(s)	914, 1041
BpuEI	CTTGAG	3 cut(s)	1143, 1235, 1815
BpuMI	CCSGG	1 cut(s)	458
BsaBI	GATNNNNATC	1 cut(s)	1651
BsaHI	GRCGYC	1 cut(s)	262
BsaJI	CCNNGG	5 cut(s)	28, 678, 1332, 1754, 1763
BsaWI	WCCGGW	3 cut(s)	246, 407, 808
BsaXI	ACNNNNNCTCC	6 cut(s)	389, 419, 636, 666, 1396, 1426
Bsc4I	CCNNNNNNNGG	7 cut(s)	34, 97, 258, 414, 509, 915, 1084
Bse118I	RCCGGY	1 cut(s)	246
Bse1I	ACTGG	1 cut(s)	1118
Bse3DI	GCAATG	2 cut(s)	861, 1296
Bse8I	GATNNNNATC	1 cut(s)	1651
BseAI	TCCGGA	1 cut(s)	808
BseBI	CCWGG	1 cut(s)	1428
BseDI	CCNNGG	5 cut(s)	28, 678, 1332, 1754, 1763
BseGI	GGATG	7 cut(s)	17, 763, 943, 1153, 1372, 1404, 1750
BseJI	GATNNNNATC	1 cut(s)	1651
BseLI	CCNNNNNNNGG	7 cut(s)	34, 97, 258, 414, 509, 915, 1084
BseMI	GCAATG	2 cut(s)	861, 1296
BseMII	CTCAG	5 cut(s)	432, 928, 1032, 1083, 1407
BseNI	ACTGG	1 cut(s)	1118
BseRI	GAGGAG	5 cut(s)	340, 466, 1058, 1271, 1601
BseSI	GKGCMC	1 cut(s)	1137
BseX3I	CGGCCG	1 cut(s)	864
BseXI	GCAGC	7 cut(s)	538, 865, 868, 896, 1288, 1473, 1552
BsgI	GTGCAG	1 cut(s)	1287
Bsh1285I	CGRYCG	2 cut(s)	247, 867
BshFI	GGCC	6 cut(s)	39, 70, 849, 866, 908, 958
BshNI	GGYRCC	1 cut(s)	1378
BshTI	ACCGGT	1 cut(s)	246
BsiEI	CGRYCG	2 cut(s)	247, 867
BsiHKAI	GWGCWC	3 cut(s)	131, 915, 1137
BsiHKCI	CYCGRG	1 cut(s)	468
BsiSI	CCGG	6 cut(s)	188, 247, 408, 446, 457, 809
BslFI	GGGAC	2 cut(s)	410, 657
BslI	CCNNNNNNNGG	7 cut(s)	34, 97, 258, 414, 509, 915, 1084
BsmAI	GTCTC	5 cut(s)	225, 477, 1128, 1670, 1848
BsmBI	CGTCTC	2 cut(s)	225, 1848
BsmFI	GGGAC	2 cut(s)	410, 657
BsmI	GAATGC	1 cut(s)	742
BsnI	GGCC	6 cut(s)	39, 70, 849, 866, 908, 958
BsoBI	CYCGRG	1 cut(s)	468
Bsp1286I	GDGCHC	6 cut(s)	131, 468, 915, 1137, 1525, 1862
Bsp13I	TCCGGA	1 cut(s)	808
Bsp143I	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
Bsp19I	CCATGG	1 cut(s)	1332
BspACI	CCGC	6 cut(s)	364, 432, 1222, 1294, 1791, 1856
BspANI	GGCC	6 cut(s)	39, 70, 849, 866, 908, 958
BspCNI	CTCAG	5 cut(s)	433, 927, 1033, 1084, 1408
BspEI	TCCGGA	1 cut(s)	808
BspHI	TCATGA	1 cut(s)	696
BspLI	GGNNCC	5 cut(s)	26, 295, 455, 1089, 1380
BspMAI	CTGCAG	1 cut(s)	886
BspMI	ACCTGC	1 cut(s)	976
BspPI	GGATC	3 cut(s)	1037, 1205, 1776
BspT107I	GGYRCC	1 cut(s)	1378
BsrDI	GCAATG	2 cut(s)	861, 1296
BsrFI	RCCGGY	1 cut(s)	246
BsrI	ACTGG	1 cut(s)	1118
BssAI	RCCGGY	1 cut(s)	246
BssECI	CCNNGG	5 cut(s)	28, 678, 1332, 1754, 1763
BssMI	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
BssNI	GRCGYC	1 cut(s)	262
BssSI	CACGAG	1 cut(s)	1024
BssT1I	CCWWGG	5 cut(s)	28, 678, 1332, 1754, 1763
Bst2BI	CACGAG	1 cut(s)	1024
Bst2UI	CCWGG	1 cut(s)	1428
Bst4CI	ACNGT	5 cut(s)	213, 275, 1011, 1468, 1713
Bst6I	CTCTTC	5 cut(s)	295, 386, 927, 1011, 1688
BstACI	GRCGYC	1 cut(s)	262
BstAPI	GCANNNNNTGC	2 cut(s)	532, 1574
BstC8I	GCNNGC	4 cut(s)	555, 1287, 1684, 1858
BstDEI	CTNAG	7 cut(s)	441, 914, 1041, 1092, 1416, 1533, 1546
BstDSI	CCRYGG	1 cut(s)	1332
BstF5I	GGATG	7 cut(s)	17, 763, 943, 1153, 1372, 1404, 1750
BstKTI	GATC	6 cut(s)	587, 718, 1032, 1213, 1649, 1771
BstMAI	GTCTC	5 cut(s)	225, 477, 1128, 1670, 1848
BstMBI	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
BstMCI	CGRYCG	2 cut(s)	247, 867
BstNI	CCWGG	1 cut(s)	1428
BstSCI	CCNGG	2 cut(s)	456, 1426
BstSFI	CTRYAG	2 cut(s)	711, 882
BstSLI	GKGCMC	1 cut(s)	1137
BstV1I	GCAGC	7 cut(s)	538, 865, 868, 896, 1288, 1473, 1552
BstV2I	GAAGAC	3 cut(s)	383, 411, 1429
BstX2I	RGATCY	3 cut(s)	584, 715, 1210
BstYI	RGATCY	3 cut(s)	584, 715, 1210
BstZI	CGGCCG	1 cut(s)	864
BsuRI	GGCC	6 cut(s)	39, 70, 849, 866, 908, 958
BtgI	CCRYGG	1 cut(s)	1332
BtgZI	GCGATG	2 cut(s)	300, 783
BtrI	CACGTC	1 cut(s)	1481
BtsCI	GGATG	7 cut(s)	17, 763, 943, 1153, 1372, 1404, 1750
BtsIMutI	CAGTG	2 cut(s)	499, 1464
BveI	ACCTGC	1 cut(s)	976
Cac8I	GCNNGC	4 cut(s)	555, 1287, 1684, 1858
CciI	TCATGA	1 cut(s)	696
Cfr10I	RCCGGY	1 cut(s)	246
Cfr13I	GGNCC	7 cut(s)	24, 37, 68, 249, 827, 848, 956
CseI	GACGC	1 cut(s)	251
CsiI	ACCWGGT	1 cut(s)	1426
Csp6I	GTAC	4 cut(s)	81, 653, 1111, 1661
CspAI	ACCGGT	1 cut(s)	246
CviAII	CATG	7 cut(s)	697, 804, 1262, 1333, 1363, 1497, 1825
CviQI	GTAC	4 cut(s)	81, 653, 1111, 1661
DdeI	CTNAG	7 cut(s)	441, 914, 1041, 1092, 1416, 1533, 1546
DpnI	GATC	6 cut(s)	586, 717, 1031, 1212, 1648, 1770
DpnII	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
DraI	TTTAAA	1 cut(s)	1198
EaeI	YGGCCR	1 cut(s)	864
EagI	CGGCCG	1 cut(s)	864
Eam1104I	CTCTTC	5 cut(s)	295, 386, 927, 1011, 1688
EarI	CTCTTC	5 cut(s)	295, 386, 927, 1011, 1688
EciI	GGCGGA	1 cut(s)	379
Ecl136II	GAGCTC	1 cut(s)	913
EclXI	CGGCCG	1 cut(s)	864
Eco130I	CCWWGG	5 cut(s)	28, 678, 1332, 1754, 1763
Eco24I	GRGCYC	4 cut(s)	468, 915, 1525, 1862
Eco47I	GGWCC	3 cut(s)	24, 249, 827
Eco52I	CGGCCG	1 cut(s)	864
Eco53kI	GAGCTC	1 cut(s)	913
Eco57I	CTGAAG	2 cut(s)	650, 1002
Eco88I	CYCGRG	1 cut(s)	468
EcoICRI	GAGCTC	1 cut(s)	913
EcoO109I	RGGNCCY	1 cut(s)	956
EcoRII	CCWGG	1 cut(s)	1426
EcoT14I	CCWWGG	5 cut(s)	28, 678, 1332, 1754, 1763
EcoT22I	ATGCAT	1 cut(s)	744
EcoT38I	GRGCYC	4 cut(s)	468, 915, 1525, 1862
ErhI	CCWWGG	5 cut(s)	28, 678, 1332, 1754, 1763
Esp3I	CGTCTC	2 cut(s)	225, 1848
FaeI	CATG	7 cut(s)	700, 807, 1265, 1336, 1366, 1500, 1828
FaqI	GGGAC	2 cut(s)	410, 657
FatI	CATG	7 cut(s)	696, 803, 1261, 1332, 1362, 1496, 1824
FauI	CCCGC	2 cut(s)	1287, 1849
FauNDI	CATATG	1 cut(s)	1057
Fnu4HI	GCNGC	7 cut(s)	527, 879, 882, 885, 1302, 1462, 1566
FokI	GGATG	7 cut(s)	24, 770, 950, 1140, 1379, 1411, 1737
FriOI	GRGCYC	4 cut(s)	468, 915, 1525, 1862
Fsp4HI	GCNGC	7 cut(s)	527, 879, 882, 885, 1302, 1462, 1566
FspBI	CTAG	5 cut(s)	18, 29, 1067, 1232, 1491
GluI	GCNGC	7 cut(s)	527, 879, 882, 885, 1302, 1462, 1566
GsuI	CTGGAG	1 cut(s)	280
HaeIII	GGCC	6 cut(s)	39, 70, 849, 866, 908, 958
HapII	CCGG	6 cut(s)	188, 247, 408, 446, 457, 809
HgaI	GACGC	1 cut(s)	251
Hin1I	GRCGYC	1 cut(s)	262
Hin1II	CATG	7 cut(s)	700, 807, 1265, 1336, 1366, 1500, 1828
HindIII	AAGCTT	1 cut(s)	1191
HinfI	GANTC	7 cut(s)	206, 239, 404, 437, 700, 989, 1814
HpaII	CCGG	6 cut(s)	188, 247, 408, 446, 457, 809
HphI	GGTGA	5 cut(s)	201, 446, 794, 1352, 1496
Hpy166II	GTNNAC	3 cut(s)	81, 1135, 1624
Hpy188III	TCNNGA	9 cut(s)	297, 697, 809, 1024, 1091, 1214, 1415, 1690, 1772
Hpy8I	GTNNAC	3 cut(s)	81, 1135, 1624
Hpy99I	CGWCG	8 cut(s)	203, 206, 217, 220, 239, 267, 270, 518
HpyCH4III	ACNGT	5 cut(s)	213, 275, 1011, 1468, 1713
HpyCH4IV	ACGT	2 cut(s)	1480, 1841
HpyF3I	CTNAG	7 cut(s)	441, 914, 1041, 1092, 1416, 1533, 1546
HpySE526I	ACGT	2 cut(s)	1480, 1841
Hsp92I	GRCGYC	1 cut(s)	262
Hsp92II	CATG	7 cut(s)	700, 807, 1265, 1336, 1366, 1500, 1828
Kpn2I	TCCGGA	1 cut(s)	808
Kzo9I	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
LmnI	GCTCC	6 cut(s)	299, 366, 453, 1070, 1093, 1258
Lsp1109I	GCAGC	7 cut(s)	538, 865, 868, 896, 1288, 1473, 1552
LweI	GCATC	7 cut(s)	607, 729, 806, 928, 1027, 1577, 1600
MabI	ACCWGGT	1 cut(s)	1426
MaeI	CTAG	5 cut(s)	18, 29, 1067, 1232, 1491
MaeII	ACGT	2 cut(s)	1480, 1841
MaeIII	GTNAC	3 cut(s)	275, 1021, 1317
MalI	GATC	6 cut(s)	586, 717, 1031, 1212, 1648, 1770
MboI	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
MflI	RGATCY	3 cut(s)	584, 715, 1210
MhlI	GDGCHC	6 cut(s)	131, 468, 915, 1137, 1525, 1862
MluCI	AATT	8 cut(s)	4, 44, 134, 497, 573, 843, 1268, 1808
MlyI	GAGTC	1 cut(s)	398
MmeI	TCCRAC	4 cut(s)	258, 267, 909, 1695
Mph1103I	ATGCAT	1 cut(s)	744
MroI	TCCGGA	1 cut(s)	808
MroXI	GAANNNNTTC	1 cut(s)	611
MseI	TTAA	9 cut(s)	594, 720, 731, 1197, 1245, 1272, 1371, 1470, 1838
MslI	CAYNNNNRTG	1 cut(s)	802
MspI	CCGG	6 cut(s)	188, 247, 408, 446, 457, 809
MspR9I	CCNGG	2 cut(s)	458, 1428
Mva1269I	GAATGC	1 cut(s)	742
MvaI	CCWGG	1 cut(s)	1428
NciI	CCSGG	1 cut(s)	458
NcoI	CCATGG	1 cut(s)	1332
NdeI	CATATG	1 cut(s)	1057
NdeII	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
NlaIII	CATG	7 cut(s)	700, 807, 1265, 1336, 1366, 1500, 1828
NlaIV	GGNNCC	5 cut(s)	26, 295, 455, 1089, 1380
NmeAIII	GCCGAG	2 cut(s)	892, 934
NmuCI	GTSAC	2 cut(s)	275, 1021
NsiI	ATGCAT	1 cut(s)	744
PagI	TCATGA	1 cut(s)	696
PaqCI	CACCTGC	1 cut(s)	976
PcsI	WCGNNNNNNNCGW	2 cut(s)	271, 419
PctI	GAATGC	1 cut(s)	742
PdmI	GAANNNNTTC	1 cut(s)	611
PfeI	GAWTC	6 cut(s)	206, 239, 437, 700, 989, 1814
PflMI	CCANNNNNTGG	2 cut(s)	97, 1084
PinAI	ACCGGT	1 cut(s)	246
PkrI	GCNGC	7 cut(s)	528, 880, 883, 886, 1303, 1463, 1567
PleI	GAGTC	1 cut(s)	398
PpsI	GAGTC	1 cut(s)	398
Psp124BI	GAGCTC	1 cut(s)	915
Psp6I	CCWGG	1 cut(s)	1426
PspGI	CCWGG	1 cut(s)	1426
PspN4I	GGNNCC	5 cut(s)	26, 295, 455, 1089, 1380
PspPI	GGNCC	7 cut(s)	24, 37, 68, 249, 827, 848, 956
PstI	CTGCAG	1 cut(s)	886
PsuI	RGATCY	3 cut(s)	584, 715, 1210
RsaI	GTAC	4 cut(s)	82, 654, 1112, 1662
RsaNI	GTAC	4 cut(s)	81, 653, 1111, 1661
RseI	CAYNNNNRTG	1 cut(s)	802
SacI	GAGCTC	1 cut(s)	915
SaqAI	TTAA	9 cut(s)	594, 720, 731, 1197, 1245, 1272, 1371, 1470, 1838
SatI	GCNGC	7 cut(s)	527, 879, 882, 885, 1302, 1462, 1566
Sau3AI	GATC	6 cut(s)	584, 715, 1029, 1210, 1646, 1768
Sau96I	GGNCC	7 cut(s)	24, 37, 68, 249, 827, 848, 956
SchI	GAGTC	1 cut(s)	398
ScrFI	CCNGG	2 cut(s)	458, 1428
SduI	GDGCHC	6 cut(s)	131, 468, 915, 1137, 1525, 1862
SexAI	ACCWGGT	1 cut(s)	1426
SfaNI	GCATC	7 cut(s)	607, 729, 806, 928, 1027, 1577, 1600
SfcI	CTRYAG	2 cut(s)	711, 882
SinI	GGWCC	3 cut(s)	24, 249, 827
SmiMI	CAYNNNNRTG	1 cut(s)	802
SmlI	CTYRAG	3 cut(s)	1158, 1250, 1830
SmoI	CTYRAG	3 cut(s)	1158, 1250, 1830
SpeI	ACTAGT	1 cut(s)	1490
Sse9I	AATT	8 cut(s)	4, 44, 134, 497, 573, 843, 1268, 1808
SsiI	CCGC	6 cut(s)	364, 432, 1222, 1294, 1791, 1856
SspI	AATATT	2 cut(s)	55, 64
SspMI	CTAG	5 cut(s)	18, 29, 1067, 1232, 1491
SstI	GAGCTC	1 cut(s)	915
StyD4I	CCNGG	2 cut(s)	456, 1426
StyI	CCWWGG	5 cut(s)	28, 678, 1332, 1754, 1763
TaaI	ACNGT	5 cut(s)	213, 275, 1011, 1468, 1713
TaiI	ACGT	2 cut(s)	1483, 1844
TaqI	TCGA	3 cut(s)	254, 374, 422
TasI	AATT	8 cut(s)	4, 44, 134, 497, 573, 843, 1268, 1808
TatI	WGTACW	1 cut(s)	652
TfiI	GAWTC	6 cut(s)	206, 239, 437, 700, 989, 1814
Tru1I	TTAA	9 cut(s)	594, 720, 731, 1197, 1245, 1272, 1371, 1470, 1838
Tru9I	TTAA	9 cut(s)	594, 720, 731, 1197, 1245, 1272, 1371, 1470, 1838
TscAI	CASTG	2 cut(s)	499, 1471
TseFI	GTSAC	2 cut(s)	275, 1021
TseI	GCWGC	7 cut(s)	526, 878, 881, 884, 1301, 1461, 1565
Tsp45I	GTSAC	2 cut(s)	275, 1021
TspDTI	ATGAA	5 cut(s)	17, 609, 717, 1014, 1613
TspRI	CASTG	2 cut(s)	499, 1471
Van91I	CCANNNNNTGG	2 cut(s)	97, 1084
VneI	GTGCAC	1 cut(s)	1133
VpaK11BI	GGWCC	3 cut(s)	24, 249, 827
XapI	RAATTY	4 cut(s)	134, 497, 573, 1268
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1711
XmaJI	CCTAGG	1 cut(s)	28
XmnI	GAANNNNTTC	1 cut(s)	611
XspI	CTAG	5 cut(s)	18, 29, 1067, 1232, 1491
Zsp2I	ATGCAT	1 cut(s)	744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.