Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0001274

Physical Location & Seq

Genomic Coordinates Forward (+)

88194753 .. 88196366

Gene Structure 1614 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG554800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGGCAGTAAAAGTAAGAGGATGAAACATCTAGACTACACGAGTAACCATTCTGTCCGTTCATCAATATCCTCTCCTTCAAGCTCCGACGATTCTAAACGCTTTTCCAAGACGCGTCATCTCCACCGACCTGATGACACTTCCAAAAGAGGCAAACAGAGGCAAAGGGACAAGGCCAAGAAACAGAGGAGCAAAAGTGAGGCAAGGAGAATGAAATCGAAAGACAACGATAAGAAGAAGCAGAGAGCTTATGAGATTGATGATGATTCTGGGTCTTCAAGCGGTGGTGATCCGCAAGCGGTTCTGCGAGACTTGTTGAAGGAATTTCCTAATATTGGGTGCGATTTGAAGCAGCTTTTGCAAGTGATCGATGGGAGCAAAGCGGTTGACATAAATGGACTAGCTCAGAAACCTCTGATCAAGCCTCTCAGGACTCTGTTCCTTTCCTTGAATCTCAAGGAACTGAATCACGGAGGTTTTGTACTGCCTCCAAATGTTCGTCCGAATTTGGAGGTTGTTGGTTCCATGATTACGTCTTCTTTAGATCATGTTGTTCCTCCTGAGAGAAGGCCAATTGGCCCGGAGAAGCCGTCGCCGGAGATACTTGAAGCTGCAGCCAAATTGAGGGAGGCAGAGGCCGAGTTAAGGGAAGCTGAGTTGGAAGAAAAAGATGATGGGGTTTTTATTGGACCTGCACCACATGCTGTGGCGGCTGAAGCTGAATCAGCTAACCAGGCTGACCGGTTTGAAGAGGTGACAAGGATCACGGAAGCAGAGGATGATTGCCCCTATGAGATACTAGGATCAAACCACAATGTGTCCGGTGATAACATCAAGAAAAGGTACTGGAAGTTGTCACTTTTGGTGCACCCTGATAAATGCTCACACCCTCAAGCCAACCAAGCATTTGTGAAGCTGAACAAGGCCTTTAAAGAGCTACAGGATCCGCAGAAGCGGAGAGCGCTGGATGAGAAGATTGAGCTCAGGGAGAAGCAGGAGAGATTCATTGTTGAGTTGACGGCAATGCGGGAAGCAGCAATGTGGAGAAAGATGCAGGGGATTTCCATGGAGGGTGATGAGGAGCTACTGGCAGGTGATGTGAGTGGTGTTAAAGTGGCACGAAAAAGAGATGAGTGGATGACAGAGCTTCCACCAGAGAGGAAACATGGTATGAGTACAAGGCAGTCGACAATGTTTAGCAGGAGTGCTAAACAAGGGCGTGGGGATACCAGTGGATGGACTGATGCTCCTTCTGAAAGAGCTTGGAAAGCTAAGATGGAGTACTTACAAGCCTATAATGAGTTTGCATCACTTGCTTCGAATGAGGAGGAGAGGAAGAGGAGTTTAGTGGCAGAGTTGATGGACAATTATAAGAAAGATAAACGATCGAAATCATTGCTGCAAAAGCACCAAGAGGAGATTAGAGCAAAGAGAAAATACTCCAAGCAACAGGCAGAGGAGGAAGACTGGGTGGGGAAACATCCGTGGAAGCCTTGGGACCGTGAGAAAGATTTGGCAGGTGGTAGACAACGTGTGAAATTGGATTCAAAAAACATGACTCGAGGTTTGTCATCTCGGTTTTCTGGAGGATCATACCAGAGGAACTTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001664 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0050780

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3752 DnaJ

Protein Analysis

537

Amino Acids

61.24

Weight (kDa)

9.39

Isoelectric Point (pI)

55.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	263 - 323	1.6e-17	DnaJ domain
DUF3752	PF12572	384 - 528	8.4e-23	Protein of unknown function (DUF3752)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0001274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65280 AT1G65280
fragaria_vesca	FvH4_3g44892 FvH4_3g44892 FvH4_3g44892 FvH4_3g44931 FvH4_3g44932 FvH4_3g44960 FvH4_3g44966 FvH4_4g06470
malus_domestica	MD04G1003500.v1.1
prunus_persica	Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1
pyrus_communis	pycom04g00360
rosa_chinensis	RchiOBHm_Chr4g0398261 RchiOBHm_Chr5g0081671 RchiOBHm_Chr5g0082081 RchiOBHm_Chr5g0082701
rosa_laevigata	RLG00000036957 RLG00000036962 RLG00000036979
rosa_multiflora	Rmu_co8467303.1_g000001 Rmu_sc0000303.1_g000009 Rmu_sc0001687.1_g000002 Rmu_sc0002176.1_g000036 Rmu_sc0002723.1_g000006 Rmu_sc0002723.1_g000051 Rmu_sc0002723.1_g000052 Rmu_sc0004094.1_g000006 Rmu_sc0004835.1_g000037 Rmu_sc0012399.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343240
rosa_rugosa	Rorug04G0007200 Rorug04G0007300 Rorug05G0477600
rosa_samantha	Rh4AG084700 Rh4BG082100 Rh4CG092100 Rh4DG077200 Rh5AG529100 Rh5BG554300 Rh5BG554800 Rh5BG555700 Rh5CG577200 Rh5CG577700 Rh5CG578400 Rh5DG563900 Rh5DG564100 Rh5DG565000 Rh5DG565100
rosa_wichuraiana	Rw0G022970 Rw4G007040 Rw5G049400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1371
AarI	CACCTGC	2 cut(s)	1082, 1508
Acc36I	ACCTGC	3 cut(s)	700, 1082, 1508
AccB7I	CCANNNNNTGG	1 cut(s)	1236
AccI	GTMKAC	2 cut(s)	1187, 1525
AccII	CGCG	1 cut(s)	115
AciI	CCGC	8 cut(s)	282, 293, 299, 383, 710, 947, 955, 1027
AclWI	GGATC	6 cut(s)	284, 770, 811, 938, 951, 1597
AcsI	RAATTY	2 cut(s)	323, 505
AcuI	CTGAAG	1 cut(s)	735
AdeI	CACNNNGTG	1 cut(s)	817
AfaI	GTAC	4 cut(s)	483, 845, 1177, 1283
AfeI	AGCGCT	1 cut(s)	963
AfiI	CCNNNNNNNGG	4 cut(s)	335, 624, 645, 1236
AflIII	ACRYGT	2 cut(s)	113, 1531
AgeI	ACCGGT	1 cut(s)	741
AgsI	TTSAA	8 cut(s)	81, 279, 319, 349, 451, 608, 749, 1548
AjnI	CCWGG	1 cut(s)	732
Alw21I	GWGCWC	2 cut(s)	870, 984
Alw26I	GTCTC	1 cut(s)	303
Alw44I	GTGCAC	1 cut(s)	866
AlwI	GGATC	6 cut(s)	284, 770, 811, 938, 951, 1597
Ama87I	CYCGRG	1 cut(s)	1560
Aor51HI	AGCGCT	1 cut(s)	963
AoxI	GGCC	5 cut(s)	174, 569, 577, 636, 924
ApaLI	GTGCAC	1 cut(s)	866
ApeKI	GCWGC	5 cut(s)	352, 611, 614, 1034, 1399
ApoI	RAATTY	2 cut(s)	323, 505
ArsI	GACNNNNNNTTYG	2 cut(s)	1549, 1581
AsiGI	ACCGGT	1 cut(s)	741
AspLEI	GCGC	1 cut(s)	964
AspS9I	GGNCC	3 cut(s)	578, 689, 1498
AsuC2I	CCSGG	1 cut(s)	581
AsuHPI	GGTGA	5 cut(s)	299, 766, 836, 1085, 1106
AsuII	TTCGAA	1 cut(s)	1319
AvaI	CYCGRG	1 cut(s)	1560
AvaII	GGWCC	2 cut(s)	689, 1498
BaeGI	GKGCMC	1 cut(s)	870
BamHI	GGATCC	1 cut(s)	943
BanII	GRGCYC	1 cut(s)	984
BauI	CACGAG	1 cut(s)	40
BbsI	GAAGAC	3 cut(s)	267, 528, 1470
Bbv12I	GWGCWC	2 cut(s)	870, 984
BbvI	GCAGC	5 cut(s)	364, 598, 626, 1046, 1386
BccI	CCATC	5 cut(s)	365, 668, 1230, 1270, 1354
BceAI	ACGGC	2 cut(s)	574, 1035
BcgI	CGANNNNNNTGC	2 cut(s)	1378, 1412
BciT130I	CCWGG	1 cut(s)	734
BciVI	GTATCC	1 cut(s)	1219
BclI	TGATCA	1 cut(s)	417
BcnI	CCSGG	1 cut(s)	581
BcoDI	GTCTC	1 cut(s)	303
BfaI	CTAG	3 cut(s)	32, 401, 800
BfmI	CTRYAG	2 cut(s)	612, 938
BfoI	RGCGCY	1 cut(s)	965
BfuAI	ACCTGC	3 cut(s)	700, 1082, 1508
BfuI	GTATCC	1 cut(s)	1219
BisI	GCNGC	6 cut(s)	353, 612, 615, 711, 1035, 1400
BlsI	GCNGC	6 cut(s)	354, 613, 616, 712, 1036, 1401
BmcAI	AGTACT	1 cut(s)	1283
Bme1390I	CCNGG	2 cut(s)	581, 734
Bme18I	GGWCC	2 cut(s)	689, 1498
BmeT110I	CYCGRG	1 cut(s)	1560
BmgT120I	GGNCC	3 cut(s)	578, 689, 1498
BmiI	GGNNCC	3 cut(s)	523, 945, 1499
BmrFI	CCNGG	2 cut(s)	581, 734
BmrI	ACTGGG	1 cut(s)	1477
BmsI	GCATC	3 cut(s)	1041, 1234, 1316
BmuI	ACTGGG	1 cut(s)	1477
BpiI	GAAGAC	3 cut(s)	267, 528, 1470
BpmI	CTGGAG	1 cut(s)	1605
Bpu10I	CCTNAGC	1 cut(s)	983
Bpu14I	TTCGAA	1 cut(s)	1319
BpuEI	CTTGAG	2 cut(s)	440, 876
BpuMI	CCSGG	1 cut(s)	581
Bsa29I	ATCGAT	1 cut(s)	369
BsaBI	GATNNNNATC	1 cut(s)	1390
BsaJI	CCNNGG	3 cut(s)	1065, 1484, 1493
BsaWI	WCCGGW	2 cut(s)	741, 821
BsaXI	ACNNNNNCTCC	8 cut(s)	181, 211, 465, 495, 575, 605, 1231, 1261
Bsc4I	CCNNNNNNNGG	4 cut(s)	335, 624, 645, 1236
Bse118I	RCCGGY	1 cut(s)	741
Bse1I	ACTGG	4 cut(s)	851, 1092, 1230, 1472
Bse3DI	GCAATG	3 cut(s)	1029, 1044, 1394
Bse8I	GATNNNNATC	1 cut(s)	1390
BseBI	CCWGG	1 cut(s)	734
BseCI	ATCGAT	1 cut(s)	369
BseDI	CCNNGG	3 cut(s)	1065, 1484, 1493
BseGI	GGATG	6 cut(s)	27, 784, 973, 1143, 1241, 1480
BseJI	GATNNNNATC	1 cut(s)	1390
BseLI	CCNNNNNNNGG	4 cut(s)	335, 624, 645, 1236
BseMI	GCAATG	3 cut(s)	1029, 1044, 1394
BseMII	CTCAG	5 cut(s)	419, 442, 552, 645, 997
BseNI	ACTGG	4 cut(s)	851, 1092, 1230, 1472
BseRI	GAGGAG	7 cut(s)	202, 1094, 1340, 1343, 1354, 1430, 1472
BseSI	GKGCMC	1 cut(s)	870
BseXI	GCAGC	5 cut(s)	364, 598, 626, 1046, 1386
BsgI	GTGCAG	1 cut(s)	678
Bsh1236I	CGCG	1 cut(s)	115
Bsh1285I	CGRYCG	1 cut(s)	1388
BshFI	GGCC	5 cut(s)	176, 571, 579, 638, 926
BshTI	ACCGGT	1 cut(s)	741
BshVI	ATCGAT	1 cut(s)	369
BsiEI	CGRYCG	1 cut(s)	1388
BsiHKAI	GWGCWC	2 cut(s)	870, 984
BsiHKCI	CYCGRG	1 cut(s)	1560
BsiSI	CCGG	4 cut(s)	581, 596, 742, 822
BslFI	GGGAC	2 cut(s)	182, 1511
BslI	CCNNNNNNNGG	4 cut(s)	335, 624, 645, 1236
BsmAI	GTCTC	1 cut(s)	303
BsmFI	GGGAC	2 cut(s)	182, 1511
BsnI	GGCC	5 cut(s)	176, 571, 579, 638, 926
BsoBI	CYCGRG	1 cut(s)	1560
Bsp119I	TTCGAA	1 cut(s)	1319
Bsp1286I	GDGCHC	2 cut(s)	870, 984
Bsp143I	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
Bsp19I	CCATGG	1 cut(s)	1065
BspACI	CCGC	8 cut(s)	282, 293, 299, 383, 710, 947, 955, 1027
BspANI	GGCC	5 cut(s)	176, 571, 579, 638, 926
BspCNI	CTCAG	5 cut(s)	418, 441, 553, 646, 996
BspDI	ATCGAT	1 cut(s)	369
BspFNI	CGCG	1 cut(s)	115
BspLI	GGNNCC	3 cut(s)	523, 945, 1499
BspMAI	CTGCAG	1 cut(s)	616
BspMI	ACCTGC	3 cut(s)	700, 1082, 1508
BspPI	GGATC	6 cut(s)	284, 770, 811, 938, 951, 1597
BspT104I	TTCGAA	1 cut(s)	1319
BsrDI	GCAATG	3 cut(s)	1029, 1044, 1394
BsrFI	RCCGGY	1 cut(s)	741
BsrI	ACTGG	4 cut(s)	851, 1092, 1230, 1472
BssAI	RCCGGY	1 cut(s)	741
BssECI	CCNNGG	3 cut(s)	1065, 1484, 1493
BssMI	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
BssSI	CACGAG	1 cut(s)	40
BssT1I	CCWWGG	2 cut(s)	1065, 1493
Bst2BI	CACGAG	1 cut(s)	40
Bst2UI	CCWGG	1 cut(s)	734
Bst4CI	ACNGT	1 cut(s)	1502
Bst6I	CTCTTC	2 cut(s)	744, 1331
BstAPI	GCANNNNNTGC	3 cut(s)	358, 701, 1313
BstBI	TTCGAA	1 cut(s)	1319
BstC8I	GCNNGC	1 cut(s)	297
BstDEI	CTNAG	6 cut(s)	405, 428, 561, 654, 983, 1272
BstDSI	CCRYGG	2 cut(s)	1065, 1484
BstF5I	GGATG	6 cut(s)	27, 784, 973, 1143, 1241, 1480
BstFNI	CGCG	1 cut(s)	115
BstH2I	RGCGCY	1 cut(s)	965
BstHHI	GCGC	1 cut(s)	964
BstKTI	GATC	9 cut(s)	292, 369, 420, 547, 765, 806, 946, 1388, 1592
BstMAI	GTCTC	1 cut(s)	303
BstMBI	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
BstMCI	CGRYCG	1 cut(s)	1388
BstNI	CCWGG	1 cut(s)	734
BstNSI	RCATGY	1 cut(s)	704
BstSCI	CCNGG	2 cut(s)	579, 732
BstSFI	CTRYAG	2 cut(s)	612, 938
BstSLI	GKGCMC	1 cut(s)	870
BstUI	CGCG	1 cut(s)	115
BstV1I	GCAGC	5 cut(s)	364, 598, 626, 1046, 1386
BstV2I	GAAGAC	3 cut(s)	267, 528, 1470
BstX2I	RGATCY	1 cut(s)	943
BstYI	RGATCY	1 cut(s)	943
Bsu15I	ATCGAT	1 cut(s)	369
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	5 cut(s)	176, 571, 579, 638, 926
BsuTUI	ATCGAT	1 cut(s)	369
BtgI	CCRYGG	2 cut(s)	1065, 1484
BtsCI	GGATG	6 cut(s)	27, 784, 973, 1143, 1241, 1480
BtsIMutI	CAGTG	1 cut(s)	1237
BveI	ACCTGC	3 cut(s)	700, 1082, 1508
Cac8I	GCNNGC	1 cut(s)	297
CfoI	GCGC	1 cut(s)	964
Cfr10I	RCCGGY	1 cut(s)	741
Cfr13I	GGNCC	3 cut(s)	578, 689, 1498
ClaI	ATCGAT	1 cut(s)	369
CseI	GACGC	2 cut(s)	104, 121
Csp6I	GTAC	4 cut(s)	482, 844, 1176, 1282
CspAI	ACCGGT	1 cut(s)	741
CviAII	CATG	6 cut(s)	526, 548, 701, 1066, 1166, 1555
CviQI	GTAC	4 cut(s)	482, 844, 1176, 1282
DdeI	CTNAG	6 cut(s)	405, 428, 561, 654, 983, 1272
DpnI	GATC	9 cut(s)	291, 368, 419, 546, 764, 805, 945, 1387, 1591
DpnII	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
DraI	TTTAAA	1 cut(s)	931
DraIII	CACNNNGTG	1 cut(s)	817
Eam1104I	CTCTTC	2 cut(s)	744, 1331
EarI	CTCTTC	2 cut(s)	744, 1331
Ecl136II	GAGCTC	1 cut(s)	982
Eco130I	CCWWGG	2 cut(s)	1065, 1493
Eco147I	AGGCCT	1 cut(s)	926
Eco24I	GRGCYC	1 cut(s)	984
Eco47I	GGWCC	2 cut(s)	689, 1498
Eco47III	AGCGCT	1 cut(s)	963
Eco53kI	GAGCTC	1 cut(s)	982
Eco57I	CTGAAG	1 cut(s)	735
Eco88I	CYCGRG	1 cut(s)	1560
EcoICRI	GAGCTC	1 cut(s)	982
EcoRII	CCWGG	1 cut(s)	732
EcoT14I	CCWWGG	2 cut(s)	1065, 1493
EcoT38I	GRGCYC	1 cut(s)	984
ErhI	CCWWGG	2 cut(s)	1065, 1493
FaeI	CATG	6 cut(s)	529, 551, 704, 1069, 1169, 1558
FaqI	GGGAC	2 cut(s)	182, 1511
FatI	CATG	6 cut(s)	525, 547, 700, 1065, 1165, 1554
FauI	CCCGC	1 cut(s)	1020
FbaI	TGATCA	1 cut(s)	417
FblI	GTMKAC	2 cut(s)	1187, 1525
Fnu4HI	GCNGC	6 cut(s)	353, 612, 615, 711, 1035, 1400
FokI	GGATG	6 cut(s)	34, 791, 980, 1150, 1248, 1467
FriOI	GRGCYC	1 cut(s)	984
Fsp4HI	GCNGC	6 cut(s)	353, 612, 615, 711, 1035, 1400
FspBI	CTAG	3 cut(s)	32, 401, 800
GlaI	GCGC	1 cut(s)	963
GluI	GCNGC	6 cut(s)	353, 612, 615, 711, 1035, 1400
GsuI	CTGGAG	1 cut(s)	1605
HaeII	RGCGCY	1 cut(s)	965
HaeIII	GGCC	5 cut(s)	176, 571, 579, 638, 926
HapII	CCGG	4 cut(s)	581, 596, 742, 822
HgaI	GACGC	2 cut(s)	104, 121
HhaI	GCGC	1 cut(s)	964
Hin1II	CATG	6 cut(s)	529, 551, 704, 1069, 1169, 1558
Hin6I	GCGC	1 cut(s)	962
HinP1I	GCGC	1 cut(s)	962
HincII	GTYRAC	3 cut(s)	388, 1017, 1188
HindII	GTYRAC	3 cut(s)	388, 1017, 1188
HinfI	GANTC	9 cut(s)	92, 266, 433, 451, 466, 722, 1002, 1544, 1558
HpaII	CCGG	4 cut(s)	581, 596, 742, 822
HphI	GGTGA	5 cut(s)	299, 766, 836, 1085, 1106
Hpy166II	GTNNAC	5 cut(s)	388, 868, 1017, 1188, 1526
Hpy188I	TCNGA	5 cut(s)	88, 408, 417, 504, 1255
Hpy188III	TCNNGA	5 cut(s)	32, 430, 560, 835, 1584
Hpy8I	GTNNAC	5 cut(s)	388, 868, 1017, 1188, 1526
Hpy99I	CGWCG	2 cut(s)	92, 595
HpyAV	CCTTC	4 cut(s)	87, 313, 561, 1260
HpyCH4III	ACNGT	1 cut(s)	1502
HpyCH4IV	ACGT	2 cut(s)	533, 1531
HpyCH4V	TGCA	7 cut(s)	361, 614, 695, 868, 1054, 1307, 1402
HpyF3I	CTNAG	6 cut(s)	405, 428, 561, 654, 983, 1272
HpySE526I	ACGT	2 cut(s)	533, 1531
Hsp92II	CATG	6 cut(s)	529, 551, 704, 1069, 1169, 1558
HspAI	GCGC	1 cut(s)	962
Ksp22I	TGATCA	1 cut(s)	417
Kzo9I	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
LmnI	GCTCC	5 cut(s)	89, 189, 375, 1081, 1252
Lsp1109I	GCAGC	5 cut(s)	364, 598, 626, 1046, 1386
LweI	GCATC	3 cut(s)	1041, 1234, 1316
MaeI	CTAG	3 cut(s)	32, 401, 800
MaeII	ACGT	2 cut(s)	533, 1531
MaeIII	GTNAC	3 cut(s)	44, 754, 855
MalI	GATC	9 cut(s)	291, 368, 419, 546, 764, 805, 945, 1387, 1591
MboI	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
MboII	GAAGA	8 cut(s)	247, 267, 528, 674, 761, 985, 1348, 1475
MfeI	CAATTG	1 cut(s)	573
MflI	RGATCY	1 cut(s)	943
MhlI	GDGCHC	2 cut(s)	870, 984
MluCI	AATT	6 cut(s)	323, 505, 573, 620, 1366, 1538
MluI	ACGCGT	1 cut(s)	113
MlyI	GAGTC	2 cut(s)	427, 1552
MmeI	TCCRAC	2 cut(s)	111, 639
MseI	TTAA	3 cut(s)	644, 930, 1110
MspI	CCGG	4 cut(s)	581, 596, 742, 822
MspR9I	CCNGG	2 cut(s)	581, 734
MunI	CAATTG	1 cut(s)	573
MvaI	CCWGG	1 cut(s)	734
MvnI	CGCG	1 cut(s)	115
NciI	CCSGG	1 cut(s)	581
NcoI	CCATGG	1 cut(s)	1065
NdeII	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
NlaIII	CATG	6 cut(s)	529, 551, 704, 1069, 1169, 1558
NlaIV	GGNNCC	3 cut(s)	523, 945, 1499
NmeAIII	GCCGAG	1 cut(s)	664
NmuCI	GTSAC	2 cut(s)	754, 855
NspI	RCATGY	1 cut(s)	704
NspV	TTCGAA	1 cut(s)	1319
PaeR7I	CTCGAG	1 cut(s)	1560
PaqCI	CACCTGC	2 cut(s)	1082, 1508
PceI	AGGCCT	1 cut(s)	926
PfeI	GAWTC	7 cut(s)	92, 266, 451, 466, 722, 1002, 1544
PflMI	CCANNNNNTGG	1 cut(s)	1236
PinAI	ACCGGT	1 cut(s)	741
PkrI	GCNGC	6 cut(s)	354, 613, 616, 712, 1036, 1401
Ple19I	CGATCG	1 cut(s)	1388
PleI	GAGTC	2 cut(s)	427, 1552
PpsI	GAGTC	2 cut(s)	427, 1552
PsiI	TTATAA	1 cut(s)	1371
Psp124BI	GAGCTC	1 cut(s)	984
Psp6I	CCWGG	1 cut(s)	732
PspGI	CCWGG	1 cut(s)	732
PspN4I	GGNNCC	3 cut(s)	523, 945, 1499
PspPI	GGNCC	3 cut(s)	578, 689, 1498
PspXI	VCTCGAGB	1 cut(s)	1560
PstI	CTGCAG	1 cut(s)	616
PsuI	RGATCY	1 cut(s)	943
PvuI	CGATCG	1 cut(s)	1388
RsaI	GTAC	4 cut(s)	483, 845, 1177, 1283
RsaNI	GTAC	4 cut(s)	482, 844, 1176, 1282
SacI	GAGCTC	1 cut(s)	984
SalI	GTCGAC	1 cut(s)	1186
SaqAI	TTAA	3 cut(s)	644, 930, 1110
SatI	GCNGC	6 cut(s)	353, 612, 615, 711, 1035, 1400
Sau3AI	GATC	9 cut(s)	289, 366, 417, 544, 762, 803, 943, 1385, 1589
Sau96I	GGNCC	3 cut(s)	578, 689, 1498
ScaI	AGTACT	1 cut(s)	1283
SchI	GAGTC	2 cut(s)	427, 1552
ScrFI	CCNGG	2 cut(s)	581, 734
SduI	GDGCHC	2 cut(s)	870, 984
SfaNI	GCATC	3 cut(s)	1041, 1234, 1316
SfcI	CTRYAG	2 cut(s)	612, 938
Sfr274I	CTCGAG	1 cut(s)	1560
SfuI	TTCGAA	1 cut(s)	1319
SinI	GGWCC	2 cut(s)	689, 1498
SlaI	CTCGAG	1 cut(s)	1560
SmlI	CTYRAG	3 cut(s)	455, 891, 1560
SmoI	CTYRAG	3 cut(s)	455, 891, 1560
Sse9I	AATT	6 cut(s)	323, 505, 573, 620, 1366, 1538
SseBI	AGGCCT	1 cut(s)	926
SsiI	CCGC	8 cut(s)	282, 293, 299, 383, 710, 947, 955, 1027
SspI	AATATT	1 cut(s)	334
SspMI	CTAG	3 cut(s)	32, 401, 800
SstI	GAGCTC	1 cut(s)	984
StuI	AGGCCT	1 cut(s)	926
StyD4I	CCNGG	2 cut(s)	579, 732
StyI	CCWWGG	2 cut(s)	1065, 1493
TaaI	ACNGT	1 cut(s)	1502
TaiI	ACGT	2 cut(s)	536, 1534
TaqI	TCGA	6 cut(s)	218, 369, 1187, 1319, 1388, 1561
TasI	AATT	6 cut(s)	323, 505, 573, 620, 1366, 1538
TatI	WGTACW	3 cut(s)	481, 1175, 1281
TauI	GCSGC	1 cut(s)	713
TfiI	GAWTC	7 cut(s)	92, 266, 451, 466, 722, 1002, 1544
Tru1I	TTAA	3 cut(s)	644, 930, 1110
Tru9I	TTAA	3 cut(s)	644, 930, 1110
TscAI	CASTG	1 cut(s)	1237
TseFI	GTSAC	2 cut(s)	754, 855
TseI	GCWGC	5 cut(s)	352, 611, 614, 1034, 1399
Tsp45I	GTSAC	2 cut(s)	754, 855
TspDTI	ATGAA	4 cut(s)	38, 51, 227, 994
TspGWI	ACGGA	4 cut(s)	47, 486, 782, 1473
TspRI	CASTG	1 cut(s)	1237
Van91I	CCANNNNNTGG	1 cut(s)	1236
VneI	GTGCAC	1 cut(s)	866
VpaK11BI	GGWCC	2 cut(s)	689, 1498
XapI	RAATTY	2 cut(s)	323, 505
XbaI	TCTAGA	1 cut(s)	31
XceI	RCATGY	1 cut(s)	704
XhoI	CTCGAG	1 cut(s)	1560
XmiI	GTMKAC	2 cut(s)	1187, 1525
XspI	CTAG	3 cut(s)	32, 401, 800
ZrmI	AGTACT	1 cut(s)	1283

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.