Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001274

Physical Location & Seq

Genomic Coordinates Reverse (-)

14727718 .. 14736905

Gene Structure 9188 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G007040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGGGGAGTAAAAGCAAGAGGAAGAAGCATTTGCCGGAAACGAGCGACGACGATTCACCGTCGTCGTCTCCTTCAAACTCCGACGAATCCGACCGGTCCTCGAAACGGCGTCGTCGCCACCGTCACAGAAGCGACGACGGCTCCAGAAGAGAGAAGGCAAGGAGAAGGGAGAGGAGAGAGAAACGGCGAAGTAAGAGAGAGGCGAGGCGGAGCAAATCGAAGACGAAGACGAAGAAGAAGAAGAGGGACTATGACTCCGGTTCGGGGTCTTCGAGTGGTGGCGGTGATTCTGAGCCGGAGAGGAGCCGGGTTGAGCCCCGAGAGGTCTTGCGAGACTTGTTCAGTGAATTTCCTAATGTTGGCGACGATTTGAAGCAGCTTTTGCAAATGATTGATAGTGGGCAAGCAGTTGATATAAAGGGAATATCTGAAAGATCTTTGATTAAGCATCTAAAGAAGTTATTCCTTTCATTAGAACTGAAGGAAAGTGATGGAGTTTTTGTACTGCCTTCAAATGTTCGTCCCACCTTGGAGGTTGTTGGGGTCATGATTCCAATGTCTGTAGATCTTAAATCTTCATTAAATGAGATGCATTCAGAACAACGGGATGAGGAATACAAACAAGTGGTTGGTGATGATAATATGGCATCGCCATGTCCGGAGGATAATGTTGCTGGTCCTAACAGAAGGATAATTGGCCCTGCAATGCCATCGGCCGAGCTACTTGCTGCTGCAGCCAAACTGACAGAGGCACAGGCCGAGCTCAGGGAAGTGGAGTTGGAAGAGGATGCTGGAATGTTTATAGGGCCTCCACCACCTGCTGTTGTTGCTGAAGTTGAATCAGCTAATGAAGCTGAACGGTTTGAAGAGGTCACGAGGATCATAGATGCTGAGGAGAATAGTCCATATGATGTTCTAGGAGCAAACCAAAATATGGCTCCTGAGAACATAAAGAAAAGGTACTGGAAGATGTCTCTTTTGGTGCACCCTGATAAATGCTCACATCCTCAAGCTCAACAAGCATTTGTCAAGTTGAACAAAGCTTTTAAAGATTTACAAGATCCAGAAAAGCGGAAAGTGCTAGATGAGAAGATTAAACTCAAGGAGGAGCATGAGAAATTTAAGGTGGAGTTGCGAGCAATGCGGGAGGCTGCACAATGGAGAAAGTTACAAGGAATATCCATGGAGGGTGATGATGAGCTATTGGCAGACATGGATGTTAAAGTGGCACCACAAAGAGATGAGTGGATGACAACGCTTCCTCCTGAGAGAAGACCTGGTGGTATGCCTACGCAATCAACAAAGTTTAGCAGCACTGTTAAAGAAGGACGTGGTGATACTAGTGCATGGACTGATACCCCTTCTGACAGAGCCCAGAAAGCTAAGATGGATTACTTAGAAGCATATAATGAGGCTGCATCACTTGCTTCAAATGAGGAGAAGAAAATGAATAGCTCAGATGCAGATTTGGTGGACAGATACAACAAAGAAAAACGATCAAAATCATTGGTACAAAAACACCAAGAGACTGCAAGCCTCCCGAAGAGAAAATCCAAGCAACCGTTGGAGAAGGAGAAGAAGGAAGAATGGGTGGGAAAACATCCTTGGAAGCCTTGGGACCGTGAAAAGGATTTGACAGGCGGTAGGCAAAGTGTAAAATTGGATTCAGAAAACATGGCCCAAGGTTTAACGTCCCGGTTTTCTGCGGGCTCCTTTCAGAGAAACTTCCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001664 GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0050780

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3752 DnaJ

Protein Analysis

577

Amino Acids

65.55

Weight (kDa)

8.91

Isoelectric Point (pI)

65.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	302 - 362	4.2e-17	DnaJ domain
DUF3752	PF12572	421 - 568	7e-28	Protein of unknown function (DUF3752)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001274)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G65280 AT1G65280
fragaria_vesca	FvH4_3g44892 FvH4_3g44892 FvH4_3g44892 FvH4_3g44931 FvH4_3g44932 FvH4_3g44960 FvH4_3g44966 FvH4_4g06470
malus_domestica	MD04G1003500.v1.1
prunus_persica	Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1 Prupe.8G058000_v2.0.a1
pyrus_communis	pycom04g00360
rosa_chinensis	RchiOBHm_Chr4g0398261 RchiOBHm_Chr5g0081671 RchiOBHm_Chr5g0082081 RchiOBHm_Chr5g0082701
rosa_laevigata	RLG00000036957 RLG00000036962 RLG00000036979
rosa_multiflora	Rmu_co8467303.1_g000001 Rmu_sc0000303.1_g000009 Rmu_sc0001687.1_g000002 Rmu_sc0002176.1_g000036 Rmu_sc0002723.1_g000006 Rmu_sc0002723.1_g000051 Rmu_sc0002723.1_g000052 Rmu_sc0004094.1_g000006 Rmu_sc0004835.1_g000037 Rmu_sc0012399.1_g000001
rosa_roxburghii	Rroxscaffold_5G00343240
rosa_rugosa	Rorug04G0007200 Rorug04G0007300 Rorug05G0477600
rosa_samantha	Rh4AG084700 Rh4BG082100 Rh4CG092100 Rh4DG077200 Rh5AG529100 Rh5BG554300 Rh5BG554800 Rh5BG555700 Rh5CG577200 Rh5CG577700 Rh5CG578400 Rh5DG563900 Rh5DG564100 Rh5DG565000 Rh5DG565100
rosa_wichuraiana	Rw0G022970 Rw4G007040 Rw5G049400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	826
Acc36I	ACCTGC	1 cut(s)	826
AccB1I	GGYRCC	1 cut(s)	1228
AccB7I	CCANNNNNTGG	1 cut(s)	934
AccIII	TCCGGA	1 cut(s)	658
AciI	CCGC	6 cut(s)	208, 282, 1072, 1144, 1641, 1706
AclWI	GGATC	2 cut(s)	887, 1055
AcoI	YGGCCR	1 cut(s)	714
AcsI	RAATTY	2 cut(s)	347, 1118
AcuI	CTGAAG	2 cut(s)	500, 852
AcyI	GRCGYC	1 cut(s)	109
AfaI	GTAC	3 cut(s)	504, 962, 1512
AfiI	CCNNNNNNNGG	6 cut(s)	105, 264, 359, 765, 934, 1627
AgeI	ACCGGT	1 cut(s)	93
AgsI	TTSAA	7 cut(s)	75, 373, 513, 839, 866, 1036, 1431
AhlI	ACTAGT	1 cut(s)	1340
AjiI	CACGTC	1 cut(s)	1331
AjnI	CCWGG	1 cut(s)	1276
AjuI	GAANNNNNNNTTGG	2 cut(s)	1588, 1620
Alw21I	GWGCWC	2 cut(s)	765, 987
Alw26I	GTCTC	4 cut(s)	72, 327, 978, 1520
Alw44I	GTGCAC	1 cut(s)	983
AlwI	GGATC	2 cut(s)	887, 1055
Ama87I	CYCGRG	1 cut(s)	318
Aor13HI	TCCGGA	1 cut(s)	658
AoxI	GGCC	5 cut(s)	697, 714, 756, 806, 1677
ApaLI	GTGCAC	1 cut(s)	983
ApeKI	GCWGC	7 cut(s)	376, 728, 731, 734, 1151, 1311, 1415
ApoI	RAATTY	2 cut(s)	347, 1118
AsiGI	ACCGGT	1 cut(s)	93
Asp700I	GAANNNNTTC	1 cut(s)	461
AspS9I	GGNCC	6 cut(s)	96, 677, 698, 806, 1618, 1678
AsuC2I	CCSGG	2 cut(s)	308, 1696
AsuHPI	GGTGA	5 cut(s)	48, 296, 644, 1202, 1346
AvaI	CYCGRG	1 cut(s)	318
AvaII	GGWCC	3 cut(s)	96, 677, 1618
BaeGI	GKGCMC	1 cut(s)	987
BanI	GGYRCC	1 cut(s)	1228
BanII	GRGCYC	4 cut(s)	318, 765, 1375, 1712
BauI	CACGAG	1 cut(s)	874
BbsI	GAAGAC	4 cut(s)	227, 233, 261, 1279
Bbv12I	GWGCWC	2 cut(s)	765, 987
BbvCI	CCTCAGC	1 cut(s)	891
BbvI	GCAGC	7 cut(s)	388, 715, 718, 746, 1138, 1323, 1402
BccI	CCATC	3 cut(s)	485, 718, 1381
BceAI	ACGGC	3 cut(s)	122, 154, 200
BcgI	CGANNNNNNTGC	4 cut(s)	693, 707, 727, 741
BciT130I	CCWGG	1 cut(s)	1278
BcnI	CCSGG	2 cut(s)	308, 1696
BcoDI	GTCTC	4 cut(s)	72, 327, 978, 1520
BcuI	ACTAGT	1 cut(s)	1340
BfaI	CTAG	3 cut(s)	917, 1082, 1341
BfmI	CTRYAG	2 cut(s)	561, 732
BfuAI	ACCTGC	1 cut(s)	826
BglII	AGATCT	2 cut(s)	434, 565
BisI	GCNGC	7 cut(s)	377, 729, 732, 735, 1152, 1312, 1416
BlsI	GCNGC	7 cut(s)	378, 730, 733, 736, 1153, 1313, 1417
Bme1390I	CCNGG	3 cut(s)	308, 1278, 1696
Bme18I	GGWCC	3 cut(s)	96, 677, 1618
BmeT110I	CYCGRG	1 cut(s)	318
BmgBI	CACGTC	1 cut(s)	1331
BmgT120I	GGNCC	6 cut(s)	96, 677, 698, 806, 1618, 1678
BmiI	GGNNCC	6 cut(s)	142, 305, 939, 1230, 1619, 1711
BmrFI	CCNGG	3 cut(s)	308, 1278, 1696
BmsI	GCATC	7 cut(s)	457, 579, 656, 778, 877, 1427, 1450
BpiI	GAAGAC	4 cut(s)	227, 233, 261, 1279
BpmI	CTGGAG	1 cut(s)	127
Bpu10I	CCTNAGC	2 cut(s)	764, 891
BpuEI	CTTGAG	2 cut(s)	993, 1085
BpuMI	CCSGG	2 cut(s)	308, 1696
BsaBI	GATNNNNATC	1 cut(s)	1501
BsaHI	GRCGYC	1 cut(s)	109
BsaJI	CCNNGG	5 cut(s)	528, 1182, 1604, 1613, 1681
BsaWI	WCCGGW	3 cut(s)	93, 257, 658
BsaXI	ACNNNNNCTCC	8 cut(s)	125, 155, 239, 269, 486, 516, 1246, 1276
Bsc4I	CCNNNNNNNGG	6 cut(s)	105, 264, 359, 765, 934, 1627
Bse118I	RCCGGY	1 cut(s)	93
Bse1I	ACTGG	1 cut(s)	968
Bse3DI	GCAATG	2 cut(s)	711, 1146
Bse8I	GATNNNNATC	1 cut(s)	1501
BseAI	TCCGGA	1 cut(s)	658
BseBI	CCWGG	1 cut(s)	1278
BseDI	CCNNGG	5 cut(s)	528, 1182, 1604, 1613, 1681
BseGI	GGATG	6 cut(s)	613, 793, 1003, 1222, 1254, 1600
BseJI	GATNNNNATC	1 cut(s)	1501
BseLI	CCNNNNNNNGG	6 cut(s)	105, 264, 359, 765, 934, 1627
BseMI	GCAATG	2 cut(s)	711, 1146
BseMII	CTCAG	6 cut(s)	282, 778, 882, 933, 1257, 1470
BseNI	ACTGG	1 cut(s)	968
BseRI	GAGGAG	5 cut(s)	187, 316, 908, 1121, 1451
BseSI	GKGCMC	1 cut(s)	987
BseX3I	CGGCCG	1 cut(s)	714
BseXI	GCAGC	7 cut(s)	388, 715, 718, 746, 1138, 1323, 1402
BsgI	GTGCAG	1 cut(s)	1137
Bsh1285I	CGRYCG	2 cut(s)	94, 717
BshFI	GGCC	5 cut(s)	699, 716, 758, 808, 1679
BshNI	GGYRCC	1 cut(s)	1228
BshTI	ACCGGT	1 cut(s)	93
BsiEI	CGRYCG	2 cut(s)	94, 717
BsiHKAI	GWGCWC	2 cut(s)	765, 987
BsiHKCI	CYCGRG	1 cut(s)	318
BsiSI	CCGG	7 cut(s)	35, 94, 258, 296, 307, 659, 1696
BslFI	GGGAC	4 cut(s)	260, 507, 1631, 1678
BslI	CCNNNNNNNGG	6 cut(s)	105, 264, 359, 765, 934, 1627
BsmAI	GTCTC	4 cut(s)	72, 327, 978, 1520
BsmBI	CGTCTC	1 cut(s)	72
BsmFI	GGGAC	4 cut(s)	260, 507, 1631, 1678
BsmI	GAATGC	1 cut(s)	592
BsnI	GGCC	5 cut(s)	699, 716, 758, 808, 1679
BsoBI	CYCGRG	1 cut(s)	318
Bsp1286I	GDGCHC	5 cut(s)	318, 765, 987, 1375, 1712
Bsp13I	TCCGGA	1 cut(s)	658
Bsp143I	GATC	5 cut(s)	434, 565, 879, 1060, 1496
Bsp19I	CCATGG	1 cut(s)	1182
BspACI	CCGC	6 cut(s)	208, 282, 1072, 1144, 1641, 1706
BspANI	GGCC	5 cut(s)	699, 716, 758, 808, 1679
BspCNI	CTCAG	6 cut(s)	283, 777, 883, 934, 1258, 1469
BspEI	TCCGGA	1 cut(s)	658
BspHI	TCATGA	1 cut(s)	546
BspLI	GGNNCC	6 cut(s)	142, 305, 939, 1230, 1619, 1711
BspMAI	CTGCAG	1 cut(s)	736
BspMI	ACCTGC	1 cut(s)	826
BspPI	GGATC	2 cut(s)	887, 1055
BspT107I	GGYRCC	1 cut(s)	1228
BsrDI	GCAATG	2 cut(s)	711, 1146
BsrFI	RCCGGY	1 cut(s)	93
BsrI	ACTGG	1 cut(s)	968
BssAI	RCCGGY	1 cut(s)	93
BssECI	CCNNGG	5 cut(s)	528, 1182, 1604, 1613, 1681
BssMI	GATC	5 cut(s)	434, 565, 879, 1060, 1496
BssNI	GRCGYC	1 cut(s)	109
BssSI	CACGAG	1 cut(s)	874
BssT1I	CCWWGG	5 cut(s)	528, 1182, 1604, 1613, 1681
Bst2BI	CACGAG	1 cut(s)	874
Bst2UI	CCWGG	1 cut(s)	1278
Bst4CI	ACNGT	6 cut(s)	60, 122, 861, 1318, 1563, 1622
Bst6I	CTCTTC	5 cut(s)	142, 236, 777, 861, 1538
BstACI	GRCGYC	1 cut(s)	109
BstAPI	GCANNNNNTGC	2 cut(s)	382, 1424
BstC8I	GCNNGC	4 cut(s)	405, 1137, 1534, 1708
BstDEI	CTNAG	8 cut(s)	291, 764, 891, 942, 1266, 1383, 1396, 1456
BstDSI	CCRYGG	1 cut(s)	1182
BstF5I	GGATG	6 cut(s)	613, 793, 1003, 1222, 1254, 1600
BstKTI	GATC	5 cut(s)	437, 568, 882, 1063, 1499
BstMAI	GTCTC	4 cut(s)	72, 327, 978, 1520
BstMBI	GATC	5 cut(s)	434, 565, 879, 1060, 1496
BstMCI	CGRYCG	2 cut(s)	94, 717
BstNI	CCWGG	1 cut(s)	1278
BstSCI	CCNGG	3 cut(s)	306, 1276, 1694
BstSFI	CTRYAG	2 cut(s)	561, 732
BstSLI	GKGCMC	1 cut(s)	987
BstV1I	GCAGC	7 cut(s)	388, 715, 718, 746, 1138, 1323, 1402
BstV2I	GAAGAC	4 cut(s)	227, 233, 261, 1279
BstX2I	RGATCY	3 cut(s)	434, 565, 1060
BstYI	RGATCY	3 cut(s)	434, 565, 1060
BstZI	CGGCCG	1 cut(s)	714
BsuRI	GGCC	5 cut(s)	699, 716, 758, 808, 1679
BtgI	CCRYGG	1 cut(s)	1182
BtgZI	GCGATG	1 cut(s)	633
BtrI	CACGTC	1 cut(s)	1331
BtsCI	GGATG	6 cut(s)	613, 793, 1003, 1222, 1254, 1600
BtsIMutI	CAGTG	2 cut(s)	349, 1314
BveI	ACCTGC	1 cut(s)	826
Cac8I	GCNNGC	4 cut(s)	405, 1137, 1534, 1708
CciI	TCATGA	1 cut(s)	546
Cfr10I	RCCGGY	1 cut(s)	93
Cfr13I	GGNCC	6 cut(s)	96, 677, 698, 806, 1618, 1678
CseI	GACGC	1 cut(s)	98
CsiI	ACCWGGT	1 cut(s)	1276
Csp6I	GTAC	3 cut(s)	503, 961, 1511
CspAI	ACCGGT	1 cut(s)	93
CviAII	CATG	7 cut(s)	547, 654, 1112, 1183, 1213, 1347, 1675
CviQI	GTAC	3 cut(s)	503, 961, 1511
DdeI	CTNAG	8 cut(s)	291, 764, 891, 942, 1266, 1383, 1396, 1456
DpnI	GATC	5 cut(s)	436, 567, 881, 1062, 1498
DpnII	GATC	5 cut(s)	434, 565, 879, 1060, 1496
DraI	TTTAAA	1 cut(s)	1048
EaeI	YGGCCR	1 cut(s)	714
EagI	CGGCCG	1 cut(s)	714
Eam1104I	CTCTTC	5 cut(s)	142, 236, 777, 861, 1538
EarI	CTCTTC	5 cut(s)	142, 236, 777, 861, 1538
EciI	GGCGGA	1 cut(s)	223
Ecl136II	GAGCTC	1 cut(s)	763
EclXI	CGGCCG	1 cut(s)	714
Eco130I	CCWWGG	5 cut(s)	528, 1182, 1604, 1613, 1681
Eco24I	GRGCYC	4 cut(s)	318, 765, 1375, 1712
Eco47I	GGWCC	3 cut(s)	96, 677, 1618
Eco52I	CGGCCG	1 cut(s)	714
Eco53kI	GAGCTC	1 cut(s)	763
Eco57I	CTGAAG	2 cut(s)	500, 852
Eco88I	CYCGRG	1 cut(s)	318
EcoICRI	GAGCTC	1 cut(s)	763
EcoO109I	RGGNCCY	1 cut(s)	806
EcoRII	CCWGG	1 cut(s)	1276
EcoT14I	CCWWGG	5 cut(s)	528, 1182, 1604, 1613, 1681
EcoT22I	ATGCAT	1 cut(s)	594
EcoT38I	GRGCYC	4 cut(s)	318, 765, 1375, 1712
ErhI	CCWWGG	5 cut(s)	528, 1182, 1604, 1613, 1681
Esp3I	CGTCTC	1 cut(s)	72
FaeI	CATG	7 cut(s)	550, 657, 1115, 1186, 1216, 1350, 1678
FaqI	GGGAC	4 cut(s)	260, 507, 1631, 1678
FatI	CATG	7 cut(s)	546, 653, 1111, 1182, 1212, 1346, 1674
FauI	CCCGC	2 cut(s)	1137, 1699
FauNDI	CATATG	1 cut(s)	907
Fnu4HI	GCNGC	7 cut(s)	377, 729, 732, 735, 1152, 1312, 1416
FokI	GGATG	6 cut(s)	620, 800, 990, 1229, 1261, 1587
FriOI	GRGCYC	4 cut(s)	318, 765, 1375, 1712
Fsp4HI	GCNGC	7 cut(s)	377, 729, 732, 735, 1152, 1312, 1416
FspBI	CTAG	3 cut(s)	917, 1082, 1341
GluI	GCNGC	7 cut(s)	377, 729, 732, 735, 1152, 1312, 1416
GsuI	CTGGAG	1 cut(s)	127
HaeIII	GGCC	5 cut(s)	699, 716, 758, 808, 1679
HapII	CCGG	7 cut(s)	35, 94, 258, 296, 307, 659, 1696
HgaI	GACGC	1 cut(s)	98
Hin1I	GRCGYC	1 cut(s)	109
Hin1II	CATG	7 cut(s)	550, 657, 1115, 1186, 1216, 1350, 1678
HindIII	AAGCTT	1 cut(s)	1041
HinfI	GANTC	7 cut(s)	53, 86, 254, 287, 550, 839, 1664
HpaII	CCGG	7 cut(s)	35, 94, 258, 296, 307, 659, 1696
HphI	GGTGA	5 cut(s)	48, 296, 644, 1202, 1346
Hpy166II	GTNNAC	2 cut(s)	985, 1474
Hpy188I	TCNGA	9 cut(s)	82, 91, 292, 430, 598, 1366, 1459, 1669, 1719
Hpy188III	TCNNGA	8 cut(s)	144, 547, 659, 874, 941, 1064, 1265, 1540
Hpy8I	GTNNAC	2 cut(s)	985, 1474
HpyCH4III	ACNGT	6 cut(s)	60, 122, 861, 1318, 1563, 1622
HpyCH4IV	ACGT	2 cut(s)	1330, 1691
HpyF3I	CTNAG	8 cut(s)	291, 764, 891, 942, 1266, 1383, 1396, 1456
HpySE526I	ACGT	2 cut(s)	1330, 1691
Hsp92I	GRCGYC	1 cut(s)	109
Hsp92II	CATG	7 cut(s)	550, 657, 1115, 1186, 1216, 1350, 1678
Kpn2I	TCCGGA	1 cut(s)	658
Kzo9I	GATC	5 cut(s)	434, 565, 879, 1060, 1496
LmnI	GCTCC	7 cut(s)	146, 210, 303, 920, 943, 1108, 1715
Lsp1109I	GCAGC	7 cut(s)	388, 715, 718, 746, 1138, 1323, 1402
LweI	GCATC	7 cut(s)	457, 579, 656, 778, 877, 1427, 1450
MabI	ACCWGGT	1 cut(s)	1276
MaeI	CTAG	3 cut(s)	917, 1082, 1341
MaeII	ACGT	2 cut(s)	1330, 1691
MaeIII	GTNAC	3 cut(s)	122, 871, 1167
MalI	GATC	5 cut(s)	436, 567, 881, 1062, 1498
MboI	GATC	5 cut(s)	434, 565, 879, 1060, 1496
MflI	RGATCY	3 cut(s)	434, 565, 1060
MhlI	GDGCHC	5 cut(s)	318, 765, 987, 1375, 1712
MluCI	AATT	4 cut(s)	347, 693, 1118, 1658
MlyI	GAGTC	1 cut(s)	248
MmeI	TCCRAC	4 cut(s)	105, 114, 759, 1545
Mph1103I	ATGCAT	1 cut(s)	594
MroI	TCCGGA	1 cut(s)	658
MroXI	GAANNNNTTC	1 cut(s)	461
MseI	TTAA	9 cut(s)	444, 570, 581, 1047, 1095, 1122, 1221, 1320, 1688
MslI	CAYNNNNRTG	1 cut(s)	652
MspI	CCGG	7 cut(s)	35, 94, 258, 296, 307, 659, 1696
MspR9I	CCNGG	3 cut(s)	308, 1278, 1696
Mva1269I	GAATGC	1 cut(s)	592
MvaI	CCWGG	1 cut(s)	1278
NciI	CCSGG	2 cut(s)	308, 1696
NcoI	CCATGG	1 cut(s)	1182
NdeI	CATATG	1 cut(s)	907
NdeII	GATC	5 cut(s)	434, 565, 879, 1060, 1496
NlaIII	CATG	7 cut(s)	550, 657, 1115, 1186, 1216, 1350, 1678
NlaIV	GGNNCC	6 cut(s)	142, 305, 939, 1230, 1619, 1711
NmeAIII	GCCGAG	2 cut(s)	742, 784
NmuCI	GTSAC	2 cut(s)	122, 871
NsiI	ATGCAT	1 cut(s)	594
PagI	TCATGA	1 cut(s)	546
PaqCI	CACCTGC	1 cut(s)	826
PcsI	WCGNNNNNNNCGW	2 cut(s)	118, 269
PctI	GAATGC	1 cut(s)	592
PdmI	GAANNNNTTC	1 cut(s)	461
PfeI	GAWTC	6 cut(s)	53, 86, 287, 550, 839, 1664
PflMI	CCANNNNNTGG	1 cut(s)	934
PinAI	ACCGGT	1 cut(s)	93
PkrI	GCNGC	7 cut(s)	378, 730, 733, 736, 1153, 1313, 1417
PleI	GAGTC	1 cut(s)	248
PpsI	GAGTC	1 cut(s)	248
Psp124BI	GAGCTC	1 cut(s)	765
Psp6I	CCWGG	1 cut(s)	1276
PspGI	CCWGG	1 cut(s)	1276
PspN4I	GGNNCC	6 cut(s)	142, 305, 939, 1230, 1619, 1711
PspPI	GGNCC	6 cut(s)	96, 677, 698, 806, 1618, 1678
PstI	CTGCAG	1 cut(s)	736
PsuI	RGATCY	3 cut(s)	434, 565, 1060
RsaI	GTAC	3 cut(s)	504, 962, 1512
RsaNI	GTAC	3 cut(s)	503, 961, 1511
RseI	CAYNNNNRTG	1 cut(s)	652
SacI	GAGCTC	1 cut(s)	765
SaqAI	TTAA	9 cut(s)	444, 570, 581, 1047, 1095, 1122, 1221, 1320, 1688
SatI	GCNGC	7 cut(s)	377, 729, 732, 735, 1152, 1312, 1416
Sau3AI	GATC	5 cut(s)	434, 565, 879, 1060, 1496
Sau96I	GGNCC	6 cut(s)	96, 677, 698, 806, 1618, 1678
SchI	GAGTC	1 cut(s)	248
ScrFI	CCNGG	3 cut(s)	308, 1278, 1696
SduI	GDGCHC	5 cut(s)	318, 765, 987, 1375, 1712
SexAI	ACCWGGT	1 cut(s)	1276
SfaNI	GCATC	7 cut(s)	457, 579, 656, 778, 877, 1427, 1450
SfcI	CTRYAG	2 cut(s)	561, 732
SinI	GGWCC	3 cut(s)	96, 677, 1618
SmiMI	CAYNNNNRTG	1 cut(s)	652
SmlI	CTYRAG	2 cut(s)	1008, 1100
SmoI	CTYRAG	2 cut(s)	1008, 1100
SpeI	ACTAGT	1 cut(s)	1340
Sse9I	AATT	4 cut(s)	347, 693, 1118, 1658
SsiI	CCGC	6 cut(s)	208, 282, 1072, 1144, 1641, 1706
SspMI	CTAG	3 cut(s)	917, 1082, 1341
SstI	GAGCTC	1 cut(s)	765
StyD4I	CCNGG	3 cut(s)	306, 1276, 1694
StyI	CCWWGG	5 cut(s)	528, 1182, 1604, 1613, 1681
TaaI	ACNGT	6 cut(s)	60, 122, 861, 1318, 1563, 1622
TaiI	ACGT	2 cut(s)	1333, 1694
TaqI	TCGA	3 cut(s)	101, 218, 272
TasI	AATT	4 cut(s)	347, 693, 1118, 1658
TatI	WGTACW	1 cut(s)	502
TfiI	GAWTC	6 cut(s)	53, 86, 287, 550, 839, 1664
Tru1I	TTAA	9 cut(s)	444, 570, 581, 1047, 1095, 1122, 1221, 1320, 1688
Tru9I	TTAA	9 cut(s)	444, 570, 581, 1047, 1095, 1122, 1221, 1320, 1688
TscAI	CASTG	2 cut(s)	349, 1321
TseFI	GTSAC	2 cut(s)	122, 871
TseI	GCWGC	7 cut(s)	376, 728, 731, 734, 1151, 1311, 1415
Tsp45I	GTSAC	2 cut(s)	122, 871
TspDTI	ATGAA	4 cut(s)	459, 567, 864, 1463
TspRI	CASTG	2 cut(s)	349, 1321
Van91I	CCANNNNNTGG	1 cut(s)	934
VneI	GTGCAC	1 cut(s)	983
VpaK11BI	GGWCC	3 cut(s)	96, 677, 1618
XapI	RAATTY	2 cut(s)	347, 1118
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1561
XmnI	GAANNNNTTC	1 cut(s)	461
XspI	CTAG	3 cut(s)	917, 1082, 1341
Zsp2I	ATGCAT	1 cut(s)	594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.