Rorug01G0071300

carboxylesterase 15

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
11635639 .. 11635869
231 bp
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UTR
Exon/CDS
Intron
Rorug01G0071300.1

Sequence Viewer

Length: 231 bp
ATGGCTTCTCAATTCGAAGAAATCTCTTTCAAGCATGTTCCCCATGAAGTAAACTTTGTAGCAGATGCGATAACGAACTTGGGCCACAACGTTACCAACCCAACCACGTGGATCAAAAAACTGCCTCTCCCAGCTCTTCCTGCTTCTAATTTCGACCAATTTAGCTTGGGTTGTAGTAGGACTTTGGGTTGTAATTTTTCCTTCTCTCTTCAAAAAGAAAAAGGCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

8.47

Weight (kDa)

6.81

Isoelectric Point (pI)

24.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 90
AclWI GGATC 1 cut(s) 119
AcvI CACGTG 1 cut(s) 108
AgsI TTSAA 2 cut(s) 31, 212
AluBI AGCT 2 cut(s) 134, 165
AluI AGCT 2 cut(s) 134, 165
AlwI GGATC 1 cut(s) 119
AoxI GGCC 1 cut(s) 82
AspS9I GGNCC 1 cut(s) 82
AsuII TTCGAA 1 cut(s) 15
BbrPI CACGTG 1 cut(s) 108
BmgT120I GGNCC 1 cut(s) 82
BmsI GCATC 1 cut(s) 55
Bpu14I TTCGAA 1 cut(s) 15
BsaAI YACGTR 1 cut(s) 108
BsaXI ACNNNNNCTCC 2 cut(s) 111, 141
BseYI CCCAGC 1 cut(s) 130
BshFI GGCC 1 cut(s) 84
BsnI GGCC 1 cut(s) 84
Bsp119I TTCGAA 1 cut(s) 15
Bsp143I GATC 1 cut(s) 111
BspANI GGCC 1 cut(s) 84
BspPI GGATC 1 cut(s) 119
BspQI GCTCTTC 1 cut(s) 141
BspT104I TTCGAA 1 cut(s) 15
BssMI GATC 1 cut(s) 111
Bst6I CTCTTC 2 cut(s) 141, 213
BstBAI YACGTR 1 cut(s) 108
BstBI TTCGAA 1 cut(s) 15
BstKTI GATC 1 cut(s) 114
BstMBI GATC 1 cut(s) 111
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstNSI RCATGY 1 cut(s) 38
BstXI CCANNNNNNTGG 1 cut(s) 108
BsuRI GGCC 1 cut(s) 84
Cfr13I GGNCC 1 cut(s) 82
CviAII CATG 2 cut(s) 35, 44
CviJI RGCY 5 cut(s) 5, 84, 134, 165, 225
CviKI_1 RGCY 5 cut(s) 5, 84, 134, 165, 225
DpnI GATC 1 cut(s) 113
DpnII GATC 1 cut(s) 111
Eam1104I CTCTTC 2 cut(s) 141, 213
EarI CTCTTC 2 cut(s) 141, 213
Eco72I CACGTG 1 cut(s) 108
FaeI CATG 2 cut(s) 38, 47
FaiI YATR 2 cut(s) 36, 45
FatI CATG 2 cut(s) 34, 43
GsaI CCCAGC 1 cut(s) 134
HaeIII GGCC 1 cut(s) 84
Hin1II CATG 2 cut(s) 38, 47
Hpy166II GTNNAC 1 cut(s) 52
Hpy8I GTNNAC 1 cut(s) 52
HpyAV CCTTC 1 cut(s) 211
HpyCH4IV ACGT 2 cut(s) 90, 107
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpySE526I ACGT 2 cut(s) 90, 107
Hsp92II CATG 2 cut(s) 38, 47
Kzo9I GATC 1 cut(s) 111
LguI GCTCTTC 1 cut(s) 141
LpnPI CCDG 2 cut(s) 144, 153
LweI GCATC 1 cut(s) 55
MaeII ACGT 2 cut(s) 90, 107
MaeIII GTNAC 1 cut(s) 91
MalI GATC 1 cut(s) 113
MboI GATC 1 cut(s) 111
MboII GAAGA 3 cut(s) 29, 128, 200
MluCI AATT 4 cut(s) 11, 148, 158, 193
MnlI CCTC 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 140
NdeII GATC 1 cut(s) 111
NlaIII CATG 2 cut(s) 38, 47
NspI RCATGY 1 cut(s) 38
NspV TTCGAA 1 cut(s) 15
PciSI GCTCTTC 1 cut(s) 141
PmaCI CACGTG 1 cut(s) 108
PmlI CACGTG 1 cut(s) 108
Ppu21I YACGTR 1 cut(s) 108
Psp1406I AACGTT 1 cut(s) 90
PspCI CACGTG 1 cut(s) 108
PspFI CCCAGC 1 cut(s) 130
PspPI GGNCC 1 cut(s) 82
SapI GCTCTTC 1 cut(s) 141
Sau3AI GATC 1 cut(s) 111
Sau96I GGNCC 1 cut(s) 82
SetI ASST 4 cut(s) 93, 110, 136, 167
SfaNI GCATC 1 cut(s) 55
SfuI TTCGAA 1 cut(s) 15
SgeI CNNG 9 cut(s) 43, 47, 56, 91, 118, 120, 143, 152, 178
Sse9I AATT 4 cut(s) 11, 148, 158, 193
TaiI ACGT 2 cut(s) 93, 110
TaqI TCGA 2 cut(s) 15, 153
TasI AATT 4 cut(s) 11, 148, 158, 193
TspDTI ATGAA 1 cut(s) 60
XceI RCATGY 1 cut(s) 38
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.