Rh1AG087600

carboxylesterase 15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000918
Physical Location & Seq
Reverse (-)
14920345 .. 14920752
408 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG087600.1

Sequence Viewer

Length: 408 bp
ATGACGACGGCTCTGTCGACCGGACATGGAGGACCTCCTCAGATCAGTTACTTATTGGAGCCTGTTCCACCTCACCAGGAATTCATTAACGGAGTTGCCACCAAAGATGTGGTTATTGACAACACGTCCGGCCATCGTGTCCGAATATATCTACCGGAGAGAAAGCCAGATGATAACAACGAGACTAAGCTACCCATAATCCTTCATTTCCATGGAGGGGGCTTTTGCTTTTGCGAAGCGGATTGGTACATGTACTACCATATCTACACCAAAATTGCACGTGCGGCCAACGCCATTGTTGTCTCCCCCTATCTAAGACAAGCACCCGAGCACCGCCTCCCAGCTCAGATGGAGGACGGCTTTTCTGCTCTCCTCTGGCTCAATCTGATTCACATGTACCGTGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

135

Amino Acids

15.33

Weight (kDa)

6.42

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 67 - 128 5.9e-17 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 13
AccI GTMKAC 1 cut(s) 17
AciI CCGC 3 cut(s) 239, 284, 334
AcoI YGGCCR 2 cut(s) 130, 285
AcsI RAATTY 1 cut(s) 80
AcvI CACGTG 1 cut(s) 281
AfaI GTAC 3 cut(s) 248, 254, 398
AfiI CCNNNNNNNGG 1 cut(s) 217
AflIII ACRYGT 3 cut(s) 123, 249, 393
AhdI GACNNNNNGTC 1 cut(s) 124
AjiI CACGTC 1 cut(s) 126
AjnI CCWGG 1 cut(s) 75
AluBI AGCT 2 cut(s) 190, 344
AluI AGCT 2 cut(s) 190, 344
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 2 cut(s) 176, 307
Ama87I CYCGRG 1 cut(s) 326
AoxI GGCC 2 cut(s) 130, 285
ApoI RAATTY 1 cut(s) 80
AspS9I GGNCC 1 cut(s) 32
AsuHPI GGTGA 1 cut(s) 65
AvaI CYCGRG 1 cut(s) 326
AvaII GGWCC 1 cut(s) 32
BbrPI CACGTG 1 cut(s) 281
Bbv12I GWGCWC 1 cut(s) 333
BccI CCATC 2 cut(s) 141, 343
BceAI ACGGC 2 cut(s) 24, 373
BciT130I CCWGG 1 cut(s) 77
BcoDI GTCTC 2 cut(s) 176, 307
BisI GCNGC 1 cut(s) 285
BlsI GCNGC 1 cut(s) 286
Bme1390I CCNGG 1 cut(s) 77
Bme18I GGWCC 1 cut(s) 32
BmeRI GACNNNNNGTC 1 cut(s) 124
BmeT110I CYCGRG 1 cut(s) 326
BmgBI CACGTC 1 cut(s) 126
BmgT120I GGNCC 1 cut(s) 32
BmiI GGNNCC 1 cut(s) 60
BmrFI CCNGG 1 cut(s) 77
BsaAI YACGTR 1 cut(s) 281
BsaJI CCNNGG 2 cut(s) 211, 400
BsaWI WCCGGW 2 cut(s) 20, 154
Bsc4I CCNNNNNNNGG 1 cut(s) 217
BseBI CCWGG 1 cut(s) 77
BseDI CCNNGG 2 cut(s) 211, 400
BseLI CCNNNNNNNGG 1 cut(s) 217
BseMII CTCAG 2 cut(s) 53, 359
BseRI GAGGAG 2 cut(s) 27, 362
BseYI CCCAGC 1 cut(s) 340
Bsh1285I CGRYCG 1 cut(s) 21
BshFI GGCC 2 cut(s) 132, 287
BsiEI CGRYCG 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 326
BsiSI CCGG 3 cut(s) 21, 129, 155
BslI CCNNNNNNNGG 1 cut(s) 217
BsmAI GTCTC 2 cut(s) 176, 307
BsnI GGCC 2 cut(s) 132, 287
BsoBI CYCGRG 1 cut(s) 326
Bsp1286I GDGCHC 1 cut(s) 333
Bsp143I GATC 1 cut(s) 42
Bsp19I CCATGG 1 cut(s) 211
BspACI CCGC 3 cut(s) 239, 284, 334
BspANI GGCC 2 cut(s) 132, 287
BspCNI CTCAG 2 cut(s) 52, 358
BspLI GGNNCC 1 cut(s) 60
BssECI CCNNGG 2 cut(s) 211, 400
BssMI GATC 1 cut(s) 42
BssT1I CCWWGG 1 cut(s) 211
Bst2UI CCWGG 1 cut(s) 77
Bst4CI ACNGT 1 cut(s) 401
BstBAI YACGTR 1 cut(s) 281
BstDEI CTNAG 4 cut(s) 39, 186, 314, 345
BstDSI CCRYGG 2 cut(s) 211, 400
BstKTI GATC 1 cut(s) 45
BstMAI GTCTC 2 cut(s) 176, 307
BstMBI GATC 1 cut(s) 42
BstMCI CGRYCG 1 cut(s) 21
BstMWI GCNNNNNNNGC 2 cut(s) 284, 290
BstNI CCWGG 1 cut(s) 77
BstNSI RCATGY 2 cut(s) 253, 397
BstSCI CCNGG 1 cut(s) 75
BstXI CCANNNNNNTGG 1 cut(s) 109
BsuRI GGCC 2 cut(s) 132, 287
BtgI CCRYGG 2 cut(s) 211, 400
BtrI CACGTC 1 cut(s) 126
Cfr13I GGNCC 1 cut(s) 32
Csp6I GTAC 3 cut(s) 247, 253, 397
CviAII CATG 4 cut(s) 26, 212, 250, 394
CviQI GTAC 3 cut(s) 247, 253, 397
DdeI CTNAG 4 cut(s) 39, 186, 314, 345
DpnI GATC 1 cut(s) 44
DpnII GATC 1 cut(s) 42
DrdI GACNNNNNNGTC 1 cut(s) 13
DriI GACNNNNNGTC 1 cut(s) 124
DseDI GACNNNNNNGTC 1 cut(s) 13
EaeI YGGCCR 2 cut(s) 130, 285
Eam1105I GACNNNNNGTC 1 cut(s) 124
Eco130I CCWWGG 1 cut(s) 211
Eco47I GGWCC 1 cut(s) 32
Eco72I CACGTG 1 cut(s) 281
Eco88I CYCGRG 1 cut(s) 326
EcoO109I RGGNCCY 1 cut(s) 32
EcoRI GAATTC 1 cut(s) 80
EcoRII CCWGG 1 cut(s) 75
EcoT14I CCWWGG 1 cut(s) 211
ErhI CCWWGG 1 cut(s) 211
FaeI CATG 4 cut(s) 29, 215, 253, 397
FaiI YATR 7 cut(s) 27, 148, 197, 213, 251, 261, 395
FatI CATG 4 cut(s) 25, 211, 249, 393
FblI GTMKAC 1 cut(s) 17
Fnu4HI GCNGC 1 cut(s) 285
Fsp4HI GCNGC 1 cut(s) 285
GluI GCNGC 1 cut(s) 285
GsaI CCCAGC 1 cut(s) 344
HaeIII GGCC 2 cut(s) 132, 287
HapII CCGG 3 cut(s) 21, 129, 155
Hin1II CATG 4 cut(s) 29, 215, 253, 397
HincII GTYRAC 1 cut(s) 18
HindII GTYRAC 1 cut(s) 18
HinfI GANTC 1 cut(s) 388
HpaII CCGG 3 cut(s) 21, 129, 155
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 18
Hpy188I TCNGA 4 cut(s) 42, 143, 348, 387
Hpy8I GTNNAC 1 cut(s) 18
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 1 cut(s) 212
HpyCH4III ACNGT 1 cut(s) 401
HpyCH4IV ACGT 2 cut(s) 125, 280
HpyCH4V TGCA 1 cut(s) 278
HpyF10VI GCNNNNNNNGC 2 cut(s) 284, 290
HpyF3I CTNAG 4 cut(s) 39, 186, 314, 345
HpySE526I ACGT 2 cut(s) 125, 280
Hsp92II CATG 4 cut(s) 29, 215, 253, 397
Kzo9I GATC 1 cut(s) 42
LmnI GCTCC 1 cut(s) 58
LpnPI CCDG 9 cut(s) 34, 62, 75, 89, 142, 168, 180, 354, 361
MaeII ACGT 2 cut(s) 125, 280
MaeIII GTNAC 1 cut(s) 47
MalI GATC 1 cut(s) 44
MboI GATC 1 cut(s) 42
MhlI GDGCHC 1 cut(s) 333
MluCI AATT 2 cut(s) 80, 273
MnlI CCTC 8 cut(s) 23, 45, 48, 81, 209, 346, 347, 383
MseI TTAA 1 cut(s) 87
MslI CAYNNNNRTG 1 cut(s) 210
MspI CCGG 3 cut(s) 21, 129, 155
MspR9I CCNGG 1 cut(s) 77
MvaI CCWGG 1 cut(s) 77
MwoI GCNNNNNNNGC 2 cut(s) 284, 290
NcoI CCATGG 1 cut(s) 211
NdeII GATC 1 cut(s) 42
NlaIII CATG 4 cut(s) 29, 215, 253, 397
NlaIV GGNNCC 1 cut(s) 60
NspI RCATGY 2 cut(s) 253, 397
PciI ACATGT 2 cut(s) 249, 393
PcsI WCGNNNNNNNCGW 1 cut(s) 14
PfeI GAWTC 1 cut(s) 388
PkrI GCNGC 1 cut(s) 286
PmaCI CACGTG 1 cut(s) 281
PmlI CACGTG 1 cut(s) 281
Ppu21I YACGTR 1 cut(s) 281
PpuMI RGGWCCY 1 cut(s) 32
PscI ACATGT 2 cut(s) 249, 393
Psp5II RGGWCCY 1 cut(s) 32
Psp6I CCWGG 1 cut(s) 75
PspCI CACGTG 1 cut(s) 281
PspFI CCCAGC 1 cut(s) 340
PspGI CCWGG 1 cut(s) 75
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 1 cut(s) 32
PspPPI RGGWCCY 1 cut(s) 32
RsaI GTAC 3 cut(s) 248, 254, 398
RsaNI GTAC 3 cut(s) 247, 253, 397
RseI CAYNNNNRTG 1 cut(s) 210
SalI GTCGAC 1 cut(s) 16
SaqAI TTAA 1 cut(s) 87
SatI GCNGC 1 cut(s) 285
Sau3AI GATC 1 cut(s) 42
Sau96I GGNCC 1 cut(s) 32
ScrFI CCNGG 1 cut(s) 77
SduI GDGCHC 1 cut(s) 333
SetI ASST 6 cut(s) 37, 73, 128, 192, 283, 346
SinI GGWCC 1 cut(s) 32
SmiMI CAYNNNNRTG 1 cut(s) 210
Sse9I AATT 2 cut(s) 80, 273
SsiI CCGC 3 cut(s) 239, 284, 334
StyD4I CCNGG 1 cut(s) 75
StyI CCWWGG 1 cut(s) 211
TaaI ACNGT 1 cut(s) 401
TaiI ACGT 2 cut(s) 128, 283
TaqI TCGA 1 cut(s) 17
TasI AATT 2 cut(s) 80, 273
TatI WGTACW 1 cut(s) 252
TauI GCSGC 1 cut(s) 287
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 1 cut(s) 87
Tru9I TTAA 1 cut(s) 87
TspDTI ATGAA 2 cut(s) 73, 194
TspGWI ACGGA 1 cut(s) 105
VpaK11BI GGWCC 1 cut(s) 32
XapI RAATTY 1 cut(s) 80
XceI RCATGY 2 cut(s) 253, 397
XcmI CCANNNNNNNNNTGG 1 cut(s) 106
XmiI GTMKAC 1 cut(s) 17
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.