Rh1AG087500

carboxylesterase 15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000918
Physical Location & Seq
Reverse (-)
14919815 .. 14920138
324 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG087500.1

Sequence Viewer

Length: 324 bp
ATGGCGGACAAGTTATTCAGCTTGTCACTTCCGGTGGGATCAACTAAGGACCATCCGATTACGTGTCCGATGGGTTCATTGGCCCCGCCTTTGGATGGTCTGAAGCTGCCTCCGATGCTTGTTTTCGTTGGGGAGATCGACGTCTTTAAGGATACTCAGGTGGAATACTATGAGGCCATGAAGAAGGCTAACCAGGATGTGCAGCTTTTGAGTTTCCCCGGAATGGGTCATGCTTTTTATCTTTCGGCGGAAATGAACCCATGCACGTCTGTCCAAACTGTGAGTCTAGTTTCTGGGATCGCAGAGTTTTTCAAGAAACATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

107

Amino Acids

11.69

Weight (kDa)

5.44

Isoelectric Point (pI)

19.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 3 - 80 4.6e-13 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 144
AciI CCGC 3 cut(s) 5, 86, 248
AclWI GGATC 2 cut(s) 46, 305
AcuI CTGAAG 1 cut(s) 122
AcyI GRCGYC 1 cut(s) 141
AfiI CCNNNNNNNGG 4 cut(s) 91, 95, 223, 224
AflIII ACRYGT 1 cut(s) 62
AgsI TTSAA 1 cut(s) 313
AjiI CACGTC 1 cut(s) 267
AjnI CCWGG 1 cut(s) 192
AluBI AGCT 3 cut(s) 21, 106, 205
AluI AGCT 3 cut(s) 21, 106, 205
AlwI GGATC 2 cut(s) 46, 305
AoxI GGCC 2 cut(s) 81, 174
ApeKI GCWGC 2 cut(s) 106, 202
ArsI GACNNNNNNTTYG 2 cut(s) 268, 300
AspS9I GGNCC 2 cut(s) 49, 82
AsuC2I CCSGG 1 cut(s) 219
AvaII GGWCC 1 cut(s) 49
BaeI ACNNNNGTAYC 2 cut(s) 144, 177
BbvI GCAGC 2 cut(s) 93, 214
BccI CCATC 3 cut(s) 60, 64, 89
BciT130I CCWGG 1 cut(s) 194
BciVI GTATCC 1 cut(s) 145
BcnI CCSGG 1 cut(s) 219
BfaI CTAG 1 cut(s) 287
BfuI GTATCC 1 cut(s) 145
BisI GCNGC 2 cut(s) 107, 203
BlsI GCNGC 2 cut(s) 108, 204
Bme1390I CCNGG 2 cut(s) 194, 219
Bme18I GGWCC 1 cut(s) 49
BmgBI CACGTC 1 cut(s) 267
BmgT120I GGNCC 2 cut(s) 49, 82
BmiI GGNNCC 1 cut(s) 84
BmrFI CCNGG 2 cut(s) 194, 219
BmsI GCATC 1 cut(s) 105
BpuMI CCSGG 1 cut(s) 219
BsaAI YACGTR 1 cut(s) 63
BsaHI GRCGYC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 217
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 95, 223, 224
BseBI CCWGG 1 cut(s) 194
BseDI CCNNGG 1 cut(s) 217
BseGI GGATG 3 cut(s) 52, 100, 202
BseLI CCNNNNNNNGG 4 cut(s) 91, 95, 223, 224
BseMII CTCAG 1 cut(s) 170
BseXI GCAGC 2 cut(s) 93, 214
BsgI GTGCAG 1 cut(s) 221
BshFI GGCC 2 cut(s) 83, 176
BsiSI CCGG 2 cut(s) 32, 219
BslI CCNNNNNNNGG 4 cut(s) 91, 95, 223, 224
BsnI GGCC 2 cut(s) 83, 176
Bsp143I GATC 3 cut(s) 38, 135, 297
BspACI CCGC 3 cut(s) 5, 86, 248
BspANI GGCC 2 cut(s) 83, 176
BspCNI CTCAG 1 cut(s) 169
BspLI GGNNCC 1 cut(s) 84
BspPI GGATC 2 cut(s) 46, 305
BssECI CCNNGG 1 cut(s) 217
BssMI GATC 3 cut(s) 38, 135, 297
BssNI GRCGYC 1 cut(s) 141
Bst2UI CCWGG 1 cut(s) 194
Bst4CI ACNGT 1 cut(s) 280
BstACI GRCGYC 1 cut(s) 141
BstBAI YACGTR 1 cut(s) 63
BstDEI CTNAG 2 cut(s) 45, 156
BstF5I GGATG 3 cut(s) 52, 100, 202
BstKTI GATC 3 cut(s) 41, 138, 300
BstMBI GATC 3 cut(s) 38, 135, 297
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstNI CCWGG 1 cut(s) 194
BstSCI CCNGG 2 cut(s) 192, 217
BstV1I GCAGC 2 cut(s) 93, 214
BsuI GTATCC 1 cut(s) 145
BsuRI GGCC 2 cut(s) 83, 176
BtrI CACGTC 1 cut(s) 267
BtsCI GGATG 3 cut(s) 52, 100, 202
Cfr13I GGNCC 2 cut(s) 49, 82
CviAII CATG 3 cut(s) 178, 230, 261
CviJI RGCY 6 cut(s) 21, 83, 106, 176, 188, 205
CviKI_1 RGCY 6 cut(s) 21, 83, 106, 176, 188, 205
DdeI CTNAG 2 cut(s) 45, 156
DpnI GATC 3 cut(s) 40, 137, 299
DpnII GATC 3 cut(s) 38, 135, 297
EciI GGCGGA 2 cut(s) 20, 263
Eco47I GGWCC 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 192
FaeI CATG 3 cut(s) 181, 233, 264
FaiI YATR 4 cut(s) 171, 179, 231, 262
FatI CATG 3 cut(s) 177, 229, 260
FauI CCCGC 1 cut(s) 93
Fnu4HI GCNGC 2 cut(s) 107, 203
FokI GGATG 3 cut(s) 39, 107, 209
Fsp4HI GCNGC 2 cut(s) 107, 203
FspBI CTAG 1 cut(s) 287
GluI GCNGC 2 cut(s) 107, 203
HaeIII GGCC 2 cut(s) 83, 176
HapII CCGG 2 cut(s) 32, 219
Hin1I GRCGYC 1 cut(s) 141
Hin1II CATG 3 cut(s) 181, 233, 264
HinfI GANTC 1 cut(s) 283
HpaII CCGG 2 cut(s) 32, 219
Hpy188I TCNGA 4 cut(s) 57, 69, 102, 114
Hpy188III TCNNGA 1 cut(s) 313
Hpy99I CGWCG 1 cut(s) 143
HpyAV CCTTC 1 cut(s) 178
HpyCH4III ACNGT 1 cut(s) 280
HpyCH4IV ACGT 3 cut(s) 62, 141, 266
HpyCH4V TGCA 2 cut(s) 202, 264
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
HpyF3I CTNAG 2 cut(s) 45, 156
HpySE526I ACGT 3 cut(s) 62, 141, 266
Hsp92I GRCGYC 1 cut(s) 141
Hsp92II CATG 3 cut(s) 181, 233, 264
Kzo9I GATC 3 cut(s) 38, 135, 297
LpnPI CCDG 6 cut(s) 45, 143, 179, 206, 232, 279
Lsp1109I GCAGC 2 cut(s) 93, 214
LweI GCATC 1 cut(s) 105
MaeI CTAG 1 cut(s) 287
MaeII ACGT 3 cut(s) 62, 141, 266
MaeIII GTNAC 1 cut(s) 24
MalI GATC 3 cut(s) 40, 137, 299
MboI GATC 3 cut(s) 38, 135, 297
MboII GAAGA 1 cut(s) 193
MlyI GAGTC 1 cut(s) 292
MnlI CCTC 2 cut(s) 120, 166
MseI TTAA 1 cut(s) 147
MspI CCGG 2 cut(s) 32, 219
MspR9I CCNGG 2 cut(s) 194, 219
MvaI CCWGG 1 cut(s) 194
MwoI GCNNNNNNNGC 1 cut(s) 115
NciI CCSGG 1 cut(s) 219
NdeII GATC 3 cut(s) 38, 135, 297
NlaIII CATG 3 cut(s) 181, 233, 264
NlaIV GGNNCC 1 cut(s) 84
NmuCI GTSAC 1 cut(s) 24
PkrI GCNGC 2 cut(s) 108, 204
PleI GAGTC 1 cut(s) 291
PpsI GAGTC 1 cut(s) 291
Ppu21I YACGTR 1 cut(s) 63
Psp6I CCWGG 1 cut(s) 192
PspGI CCWGG 1 cut(s) 192
PspN4I GGNNCC 1 cut(s) 84
PspPI GGNCC 2 cut(s) 49, 82
SaqAI TTAA 1 cut(s) 147
SatI GCNGC 2 cut(s) 107, 203
Sau3AI GATC 3 cut(s) 38, 135, 297
Sau96I GGNCC 2 cut(s) 49, 82
SchI GAGTC 1 cut(s) 292
ScrFI CCNGG 2 cut(s) 194, 219
SetI ASST 7 cut(s) 23, 65, 108, 144, 162, 207, 269
SfaNI GCATC 1 cut(s) 105
SinI GGWCC 1 cut(s) 49
SsiI CCGC 3 cut(s) 5, 86, 248
SspMI CTAG 1 cut(s) 287
StyD4I CCNGG 2 cut(s) 192, 217
TaaI ACNGT 1 cut(s) 280
TaiI ACGT 3 cut(s) 65, 144, 269
TaqI TCGA 1 cut(s) 138
Tru1I TTAA 1 cut(s) 147
Tru9I TTAA 1 cut(s) 147
TseFI GTSAC 1 cut(s) 24
TseI GCWGC 2 cut(s) 106, 202
Tsp45I GTSAC 1 cut(s) 24
TspDTI ATGAA 3 cut(s) 66, 194, 269
VpaK11BI GGWCC 1 cut(s) 49
XspI CTAG 1 cut(s) 287
ZraI GACGTC 1 cut(s) 142
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.