Rorug01G0071400

carboxylesterase 15

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
11637562 .. 11639251
1690 bp
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UTR
Exon/CDS
Intron
Rorug01G0071400.1

Sequence Viewer

Length: 1329 bp
ATGGGAAGATTGAATGCTCTGGAAACCTTAGCGATATCGAAGTGCGAATCACTACAAGTGGTATTTGAATTACTCGAAAGAAGCAATGTCAAAGAAACAAATGACGGCACATCATCCCCTCATGACCTGTTAAAGTCCTTTTTCTGTCAAAATCTTGGTTCAGTAACCATAGAAGTATGTCATAGTTTGAAAAGTATCTTCCCAGCCTCAGTGGCCAGAGGTCATGATCTTCAACAGCTAACTGAGTTGAGCGTGAGCCTTTGTAAAGGGATTGAGGAAATTGTTGGTGAGGACGATGAAGAAGGAGCACCTCCTCATTTTGAATTCCCAAAAGTAACATCGGTGAAGTTGAATGATCTGCCTAAACTCACGAGTTTCTATCCGGGGATACATACTTCACACTGGCCATTACTCAACCTATTGGAGATGCTGAGATGTTGCAACGTGGGGATTTTTGCAGCAGAATTTTCAATGGAACATGAGATGGAATGTCCAGATGGACAACACCGTCTCTTTTTAATCGACAAGGATTCGTTCCCCAACTTAGAACACTTGGAATTGAATGACATGGAAATTTGGACTGGACCAACCCCAGACCAGTTGGTGCTTGACAAATTAAAATCAATCAGCTTTGTAGGGAATTGTACACCTTTCTCCAAACAAGACTCGGTCTTTTTCCTCCAGGGATTACAAATTCTTGAAGAAATTCAAGTGAGGGATAGTGATTGCAAAGAAATATTTGTCAATCAAGGAATCAGTACCCTCCCGCAAGTAGAGATTTTGAGCCTCTATAGAATGAACAAAGTGATTCATCTAGGGAATGGCGACTTCCAATCGGTACTTTTTCCAAATTTGGAAAGTCTTAAGGTGGAGTTGTGTTCCAGATTAAAGGGTCTAGAGTCATTCGCAATATCCTTTCAGAAGCTAACAACTTTGGAAGTATCTGGGTGCAATAGAATGAAATATATCACAACTTATTCAGTGGCTAAAAGTTTTGAGCAACTCAAGACACTAAAAGTGGACAACTGTAAAAGAGTTGTAGTGATAGTGGCGAGTCCTGATGCAGCAGGAAATGAGATTCCTTTCATCCACTTGAAACATTTGGAGCTTACTCGTCTACCAAGTCTTAAAGGCTTTTGCTCCGAAAATTGCAAGGTCAAATTCCCATCCTCCATGACCTTACAAGTAGAAAAATGCCCGATCAAGTTGATTTCATCTAATGGCATCCTCCTACCAGACGGAGACAATCAATATGAGCAAAACAGGGTTGATGAGGAGGAGGAGGAGGAGGAGTTTCAAACGGTTGAGAGAGATGTTGAAATATTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

442

Amino Acids

49.84

Weight (kDa)

4.91

Isoelectric Point (pI)

38.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_RPS2 PF23247 46 - 89 5.2e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 186 - 299 3.6e-08 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 304 - 399 9.5e-12 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 507
AccI GTMKAC 1 cut(s) 1117
AciI CCGC 1 cut(s) 767
AcoI YGGCCR 2 cut(s) 213, 404
AcsI RAATTY 7 cut(s) 323, 464, 573, 693, 705, 850, 1160
AfaI GTAC 3 cut(s) 646, 760, 840
AflII CTTAAG 1 cut(s) 863
AjnI CCWGG 1 cut(s) 681
AluBI AGCT 4 cut(s) 238, 630, 925, 1108
AluI AGCT 4 cut(s) 238, 630, 925, 1108
Alw21I GWGCWC 1 cut(s) 310
Alw26I GTCTC 2 cut(s) 515, 1236
AoxI GGCC 2 cut(s) 213, 404
ApeKI GCWGC 2 cut(s) 458, 1064
ApoI RAATTY 7 cut(s) 323, 464, 573, 693, 705, 850, 1160
Asp700I GAANNNNTTC 1 cut(s) 705
AspS9I GGNCC 1 cut(s) 584
AsuC2I CCSGG 1 cut(s) 384
AsuHPI GGTGA 2 cut(s) 299, 355
AvaII GGWCC 1 cut(s) 584
BalI TGGCCA 2 cut(s) 215, 406
BauI CACGAG 1 cut(s) 370
Bbv12I GWGCWC 1 cut(s) 310
BbvI GCAGC 2 cut(s) 470, 1076
BccI CCATC 3 cut(s) 478, 491, 1174
BceAI ACGGC 1 cut(s) 121
BciT130I CCWGG 1 cut(s) 683
BciVI GTATCC 1 cut(s) 381
BcnI CCSGG 1 cut(s) 384
BcoDI GTCTC 2 cut(s) 515, 1236
BfaI CTAG 2 cut(s) 815, 896
BfmI CTRYAG 1 cut(s) 790
BfrI CTTAAG 1 cut(s) 863
BfuI GTATCC 1 cut(s) 381
BglI GCCNNNNNGGC 1 cut(s) 212
BisI GCNGC 2 cut(s) 459, 1065
BlsI GCNGC 2 cut(s) 460, 1066
Bme1390I CCNGG 2 cut(s) 384, 683
Bme18I GGWCC 1 cut(s) 584
BmgT120I GGNCC 1 cut(s) 584
BmrFI CCNGG 2 cut(s) 384, 683
BmsI GCATC 3 cut(s) 417, 1051, 1233
BpmI CTGGAG 1 cut(s) 665
Bpu10I CCTNAGC 1 cut(s) 28
BpuEI CTTGAG 1 cut(s) 989
BpuMI CCSGG 1 cut(s) 384
BsaJI CCNNGG 2 cut(s) 383, 682
BsaXI ACNNNNNCTCC 2 cut(s) 1277, 1307
Bse1I ACTGG 3 cut(s) 407, 586, 598
Bse3DI GCAATG 1 cut(s) 91
BseBI CCWGG 1 cut(s) 683
BseDI CCNNGG 2 cut(s) 383, 682
BseGI GGATG 4 cut(s) 113, 1086, 1166, 1224
BseMI GCAATG 1 cut(s) 91
BseMII CTCAG 3 cut(s) 222, 234, 422
BseNI ACTGG 3 cut(s) 407, 586, 598
BseRI GAGGAG 7 cut(s) 303, 1289, 1292, 1295, 1298, 1301, 1304
BseXI GCAGC 2 cut(s) 470, 1076
BseYI CCCAGC 1 cut(s) 202
BshFI GGCC 2 cut(s) 215, 406
BsiHKAI GWGCWC 1 cut(s) 310
BsiSI CCGG 1 cut(s) 383
BsmAI GTCTC 2 cut(s) 515, 1236
BsmBI CGTCTC 1 cut(s) 515
BsmI GAATGC 1 cut(s) 19
BsnI GGCC 2 cut(s) 215, 406
Bsp1286I GDGCHC 1 cut(s) 310
Bsp1407I TGTACA 1 cut(s) 644
Bsp143I GATC 3 cut(s) 226, 355, 1200
BspACI CCGC 1 cut(s) 767
BspANI GGCC 2 cut(s) 215, 406
BspCNI CTCAG 3 cut(s) 221, 235, 423
BspHI TCATGA 2 cut(s) 121, 223
BspTI CTTAAG 1 cut(s) 863
BsrDI GCAATG 1 cut(s) 91
BsrGI TGTACA 1 cut(s) 644
BsrI ACTGG 3 cut(s) 407, 586, 598
BssECI CCNNGG 2 cut(s) 383, 682
BssMI GATC 3 cut(s) 226, 355, 1200
BssSI CACGAG 1 cut(s) 370
Bst2BI CACGAG 1 cut(s) 370
Bst2UI CCWGG 1 cut(s) 683
Bst4CI ACNGT 3 cut(s) 509, 1028, 1303
BstAFI CTTAAG 1 cut(s) 863
BstAUI TGTACA 1 cut(s) 644
BstDEI CTNAG 5 cut(s) 28, 208, 243, 431, 544
BstF5I GGATG 4 cut(s) 113, 1086, 1166, 1224
BstKTI GATC 3 cut(s) 229, 358, 1203
BstMAI GTCTC 2 cut(s) 515, 1236
BstMBI GATC 3 cut(s) 226, 355, 1200
BstMWI GCNNNNNNNGC 1 cut(s) 212
BstNI CCWGG 1 cut(s) 683
BstSCI CCNGG 2 cut(s) 382, 681
BstSFI CTRYAG 1 cut(s) 790
BstV1I GCAGC 2 cut(s) 470, 1076
BsuI GTATCC 1 cut(s) 381
BsuRI GGCC 2 cut(s) 215, 406
BtsCI GGATG 4 cut(s) 113, 1086, 1166, 1224
BtsIMutI CAGTG 3 cut(s) 216, 400, 987
CciI TCATGA 2 cut(s) 121, 223
Cfr13I GGNCC 1 cut(s) 584
Csp6I GTAC 3 cut(s) 645, 759, 839
CviAII CATG 5 cut(s) 122, 224, 479, 568, 1174
CviQI GTAC 3 cut(s) 645, 759, 839
DdeI CTNAG 5 cut(s) 28, 208, 243, 431, 544
DpnI GATC 3 cut(s) 228, 357, 1202
DpnII GATC 3 cut(s) 226, 355, 1200
DrdI GACNNNNNNGTC 1 cut(s) 507
DseDI GACNNNNNNGTC 1 cut(s) 507
EaeI YGGCCR 2 cut(s) 213, 404
Eco32I GATATC 1 cut(s) 36
Eco47I GGWCC 1 cut(s) 584
EcoRI GAATTC 1 cut(s) 323
EcoRII CCWGG 1 cut(s) 681
EcoRV GATATC 1 cut(s) 36
Esp3I CGTCTC 1 cut(s) 515
FaeI CATG 5 cut(s) 125, 227, 482, 571, 1177
FatI CATG 5 cut(s) 121, 223, 478, 567, 1173
FauI CCCGC 1 cut(s) 774
FblI GTMKAC 1 cut(s) 1117
Fnu4HI GCNGC 2 cut(s) 459, 1065
FokI GGATG 4 cut(s) 100, 1073, 1153, 1211
Fsp4HI GCNGC 2 cut(s) 459, 1065
FspBI CTAG 2 cut(s) 815, 896
GluI GCNGC 2 cut(s) 459, 1065
GsaI CCCAGC 1 cut(s) 206
GsuI CTGGAG 1 cut(s) 665
HaeIII GGCC 2 cut(s) 215, 406
HapII CCGG 1 cut(s) 383
Hin1II CATG 5 cut(s) 125, 227, 482, 571, 1177
HinfI GANTC 8 cut(s) 47, 530, 665, 753, 808, 899, 1054, 1078
HpaII CCGG 1 cut(s) 383
HphI GGTGA 2 cut(s) 299, 355
Hpy166II GTNNAC 3 cut(s) 647, 1021, 1118
Hpy188I TCNGA 2 cut(s) 921, 1144
Hpy8I GTNNAC 3 cut(s) 647, 1021, 1118
HpyAV CCTTC 1 cut(s) 296
HpyCH4III ACNGT 3 cut(s) 509, 1028, 1303
HpyCH4IV ACGT 1 cut(s) 444
HpyCH4V TGCA 6 cut(s) 441, 458, 729, 951, 1064, 1152
HpyF10VI GCNNNNNNNGC 1 cut(s) 212
HpyF3I CTNAG 5 cut(s) 28, 208, 243, 431, 544
HpySE526I ACGT 1 cut(s) 444
Hsp92II CATG 5 cut(s) 125, 227, 482, 571, 1177
Kzo9I GATC 3 cut(s) 226, 355, 1200
LmnI GCTCC 3 cut(s) 305, 1105, 1145
Lsp1109I GCAGC 2 cut(s) 470, 1076
LweI GCATC 3 cut(s) 417, 1051, 1233
MaeI CTAG 2 cut(s) 815, 896
MaeII ACGT 1 cut(s) 444
MaeIII GTNAC 2 cut(s) 163, 334
MalI GATC 3 cut(s) 228, 357, 1202
MboI GATC 3 cut(s) 226, 355, 1200
MboII GAAGA 5 cut(s) 18, 190, 221, 311, 713
MhlI GDGCHC 1 cut(s) 310
MlsI TGGCCA 2 cut(s) 215, 406
MluNI TGGCCA 2 cut(s) 215, 406
MlyI GAGTC 3 cut(s) 659, 908, 1063
Mox20I TGGCCA 2 cut(s) 215, 406
MroXI GAANNNNTTC 1 cut(s) 705
MscI TGGCCA 2 cut(s) 215, 406
MseI TTAA 7 cut(s) 131, 518, 617, 864, 887, 1128, 1327
Msp20I TGGCCA 2 cut(s) 215, 406
MspCI CTTAAG 1 cut(s) 863
MspI CCGG 1 cut(s) 383
MspR9I CCNGG 2 cut(s) 384, 683
Mva1269I GAATGC 1 cut(s) 19
MvaI CCWGG 1 cut(s) 683
MwoI GCNNNNNNNGC 1 cut(s) 212
NciI CCSGG 1 cut(s) 384
NdeII GATC 3 cut(s) 226, 355, 1200
NlaIII CATG 5 cut(s) 125, 227, 482, 571, 1177
PagI TCATGA 2 cut(s) 121, 223
PctI GAATGC 1 cut(s) 19
PdmI GAANNNNTTC 1 cut(s) 705
PfeI GAWTC 5 cut(s) 47, 530, 753, 808, 1078
PflFI GACNNNGTC 1 cut(s) 668
PkrI GCNGC 2 cut(s) 460, 1066
PleI GAGTC 3 cut(s) 659, 907, 1062
PpsI GAGTC 3 cut(s) 659, 907, 1062
Psp6I CCWGG 1 cut(s) 681
PspFI CCCAGC 1 cut(s) 202
PspGI CCWGG 1 cut(s) 681
PspPI GGNCC 1 cut(s) 584
PsyI GACNNNGTC 1 cut(s) 668
RsaI GTAC 3 cut(s) 646, 760, 840
RsaNI GTAC 3 cut(s) 645, 759, 839
SaqAI TTAA 7 cut(s) 131, 518, 617, 864, 887, 1128, 1327
SatI GCNGC 2 cut(s) 459, 1065
Sau3AI GATC 3 cut(s) 226, 355, 1200
Sau96I GGNCC 1 cut(s) 584
SchI GAGTC 3 cut(s) 659, 908, 1063
ScrFI CCNGG 2 cut(s) 384, 683
SduI GDGCHC 1 cut(s) 310
SfaNI GCATC 3 cut(s) 417, 1051, 1233
SfcI CTRYAG 1 cut(s) 790
SinI GGWCC 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 863, 1004
SmoI CTYRAG 2 cut(s) 863, 1004
SsiI CCGC 1 cut(s) 767
SspI AATATT 2 cut(s) 738, 1323
SspMI CTAG 2 cut(s) 815, 896
StyD4I CCNGG 2 cut(s) 382, 681
TaaI ACNGT 3 cut(s) 509, 1028, 1303
TaiI ACGT 1 cut(s) 447
TaqI TCGA 3 cut(s) 38, 75, 522
TaqII GACCGA 1 cut(s) 658
TatI WGTACW 1 cut(s) 644
TfiI GAWTC 5 cut(s) 47, 530, 753, 808, 1078
Tru1I TTAA 7 cut(s) 131, 518, 617, 864, 887, 1128, 1327
Tru9I TTAA 7 cut(s) 131, 518, 617, 864, 887, 1128, 1327
TscAI CASTG 3 cut(s) 216, 407, 987
TseI GCWGC 2 cut(s) 458, 1064
TspDTI ATGAA 6 cut(s) 312, 800, 812, 974, 1075, 1203
TspGWI ACGGA 1 cut(s) 1254
TspRI CASTG 3 cut(s) 216, 407, 987
Tth111I GACNNNGTC 1 cut(s) 668
Vha464I CTTAAG 1 cut(s) 863
VpaK11BI GGWCC 1 cut(s) 584
XapI RAATTY 7 cut(s) 323, 464, 573, 693, 705, 850, 1160
XbaI TCTAGA 1 cut(s) 895
XmiI GTMKAC 1 cut(s) 1117
XmnI GAANNNNTTC 1 cut(s) 705
XspI CTAG 2 cut(s) 815, 896
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.