Rh7BG026600

carboxylesterase 15

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0000918
Physical Location & Seq
Reverse (-)
1876910 .. 1877340
431 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG026600.1

Sequence Viewer

Length: 324 bp
ATGGCGGACAATTTGTTCAGCTTGTCACTTCCGGTAGGGTCAACCAAGGACCATCCGATTACATGTCCGATGGGTTCATTGGCCCCGCCTTTGGATAGTCTGAAGCTGCCTCCGATGTTTGTTTTCGTTGGGACGATCGACAACTTTAAGTCCACTCAGATGGAGTACTATGAGGCCATGAAGAAGGCTAACCAGGATGTGCAGCTTTTGAGTCTCCCTGAAATGGGTCATGGTTTTCATCTTGGGGCGAACATTGACCCACGCGCGGCTGTCCCAATGGAAAGTCTTGTTTCTGAGATCGTAGAGTTCGTTAAGAAGCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009056 GO:0016787
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_3

Protein Analysis

107

Amino Acids

11.78

Weight (kDa)

5.48

Isoelectric Point (pI)

30.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Abhydrolase_3 PF07859 3 - 80 1.3e-10 alpha/beta hydrolase fold
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 264, 266
AciI CCGC 3 cut(s) 5, 86, 266
AcuI CTGAAG 1 cut(s) 122
AfaI GTAC 1 cut(s) 167
AfiI CCNNNNNNNGG 4 cut(s) 91, 223, 224, 265
AflIII ACRYGT 1 cut(s) 62
AjnI CCWGG 1 cut(s) 192
AloI GAACNNNNNNTCC 1 cut(s) 31
AluBI AGCT 3 cut(s) 21, 106, 205
AluI AGCT 3 cut(s) 21, 106, 205
Alw26I GTCTC 1 cut(s) 218
AoxI GGCC 2 cut(s) 81, 174
ApeKI GCWGC 2 cut(s) 106, 202
AspLEI GCGC 1 cut(s) 266
AspS9I GGNCC 2 cut(s) 49, 82
AvaII GGWCC 1 cut(s) 49
BbvI GCAGC 2 cut(s) 93, 214
BccI CCATC 3 cut(s) 60, 64, 154
BciT130I CCWGG 1 cut(s) 194
BcoDI GTCTC 1 cut(s) 218
BisI GCNGC 3 cut(s) 107, 203, 267
BlsI GCNGC 3 cut(s) 108, 204, 268
BmcAI AGTACT 1 cut(s) 167
Bme1390I CCNGG 1 cut(s) 194
Bme18I GGWCC 1 cut(s) 49
BmgT120I GGNCC 2 cut(s) 49, 82
BmiI GGNNCC 1 cut(s) 84
BmrFI CCNGG 1 cut(s) 194
BsaJI CCNNGG 1 cut(s) 45
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 4 cut(s) 91, 223, 224, 265
BseBI CCWGG 1 cut(s) 194
BseDI CCNNGG 1 cut(s) 45
BseGI GGATG 2 cut(s) 52, 202
BseLI CCNNNNNNNGG 4 cut(s) 91, 223, 224, 265
BseMII CTCAG 2 cut(s) 170, 285
BseXI GCAGC 2 cut(s) 93, 214
BsgI GTGCAG 1 cut(s) 221
Bsh1236I CGCG 2 cut(s) 264, 266
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 2 cut(s) 83, 176
BsiEI CGRYCG 1 cut(s) 138
BsiSI CCGG 1 cut(s) 32
BslFI GGGAC 2 cut(s) 145, 257
BslI CCNNNNNNNGG 4 cut(s) 91, 223, 224, 265
BsmAI GTCTC 1 cut(s) 218
BsmFI GGGAC 2 cut(s) 145, 257
BsnI GGCC 2 cut(s) 83, 176
Bsp143I GATC 2 cut(s) 135, 297
BspACI CCGC 3 cut(s) 5, 86, 266
BspANI GGCC 2 cut(s) 83, 176
BspCNI CTCAG 2 cut(s) 169, 286
BspFNI CGCG 2 cut(s) 264, 266
BspLI GGNNCC 1 cut(s) 84
BssECI CCNNGG 1 cut(s) 45
BssMI GATC 2 cut(s) 135, 297
BssT1I CCWWGG 1 cut(s) 45
Bst2UI CCWGG 1 cut(s) 194
BstDEI CTNAG 2 cut(s) 156, 294
BstF5I GGATG 2 cut(s) 52, 202
BstFNI CGCG 2 cut(s) 264, 266
BstHHI GCGC 1 cut(s) 266
BstKTI GATC 2 cut(s) 138, 300
BstMAI GTCTC 1 cut(s) 218
BstMBI GATC 2 cut(s) 135, 297
BstMCI CGRYCG 1 cut(s) 138
BstNI CCWGG 1 cut(s) 194
BstNSI RCATGY 1 cut(s) 66
BstSCI CCNGG 1 cut(s) 192
BstUI CGCG 2 cut(s) 264, 266
BstV1I GCAGC 2 cut(s) 93, 214
BstXI CCANNNNNNTGG 1 cut(s) 160
BsuRI GGCC 2 cut(s) 83, 176
BtsCI GGATG 2 cut(s) 52, 202
CfoI GCGC 1 cut(s) 266
Cfr13I GGNCC 2 cut(s) 49, 82
Csp6I GTAC 1 cut(s) 166
CviAII CATG 3 cut(s) 63, 178, 230
CviJI RGCY 7 cut(s) 21, 83, 106, 176, 188, 205, 269
CviKI_1 RGCY 7 cut(s) 21, 83, 106, 176, 188, 205, 269
CviQI GTAC 1 cut(s) 166
DdeI CTNAG 2 cut(s) 156, 294
DpnI GATC 2 cut(s) 137, 299
DpnII GATC 2 cut(s) 135, 297
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 45
Eco47I GGWCC 1 cut(s) 49
Eco57I CTGAAG 1 cut(s) 122
EcoRII CCWGG 1 cut(s) 192
EcoT14I CCWWGG 1 cut(s) 45
ErhI CCWWGG 1 cut(s) 45
FaeI CATG 3 cut(s) 66, 181, 233
FaiI YATR 4 cut(s) 64, 171, 179, 231
FaqI GGGAC 2 cut(s) 145, 257
FatI CATG 3 cut(s) 62, 177, 229
FauI CCCGC 1 cut(s) 93
Fnu4HI GCNGC 3 cut(s) 107, 203, 267
FokI GGATG 2 cut(s) 39, 209
Fsp4HI GCNGC 3 cut(s) 107, 203, 267
GlaI GCGC 1 cut(s) 265
GluI GCNGC 3 cut(s) 107, 203, 267
HaeIII GGCC 2 cut(s) 83, 176
HapII CCGG 1 cut(s) 32
HhaI GCGC 1 cut(s) 266
Hin1II CATG 3 cut(s) 66, 181, 233
Hin6I GCGC 1 cut(s) 264
HinP1I GCGC 1 cut(s) 264
HincII GTYRAC 1 cut(s) 42
HindII GTYRAC 1 cut(s) 42
HinfI GANTC 1 cut(s) 211
HpaII CCGG 1 cut(s) 32
Hpy166II GTNNAC 2 cut(s) 42, 153
Hpy188I TCNGA 6 cut(s) 57, 69, 102, 114, 159, 295
Hpy8I GTNNAC 2 cut(s) 42, 153
HpyAV CCTTC 1 cut(s) 178
HpyCH4V TGCA 1 cut(s) 202
HpyF3I CTNAG 2 cut(s) 156, 294
Hsp92II CATG 3 cut(s) 66, 181, 233
HspAI GCGC 1 cut(s) 264
Kzo9I GATC 2 cut(s) 135, 297
LpnPI CCDG 4 cut(s) 45, 179, 206, 231
Lsp1109I GCAGC 2 cut(s) 93, 214
MaeIII GTNAC 1 cut(s) 24
MalI GATC 2 cut(s) 137, 299
MboI GATC 2 cut(s) 135, 297
MboII GAAGA 1 cut(s) 193
MluCI AATT 1 cut(s) 10
MlyI GAGTC 1 cut(s) 220
MnlI CCTC 2 cut(s) 120, 166
MseI TTAA 2 cut(s) 147, 312
MslI CAYNNNNRTG 1 cut(s) 158
MspI CCGG 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 194
MvaI CCWGG 1 cut(s) 194
MvnI CGCG 2 cut(s) 264, 266
NdeII GATC 2 cut(s) 135, 297
NlaIII CATG 3 cut(s) 66, 181, 233
NlaIV GGNNCC 1 cut(s) 84
NmuCI GTSAC 1 cut(s) 24
NspI RCATGY 1 cut(s) 66
PciI ACATGT 1 cut(s) 62
PcsI WCGNNNNNNNCGW 1 cut(s) 306
PkrI GCNGC 3 cut(s) 108, 204, 268
Ple19I CGATCG 1 cut(s) 138
PleI GAGTC 1 cut(s) 219
PpsI GAGTC 1 cut(s) 219
PscI ACATGT 1 cut(s) 62
Psp6I CCWGG 1 cut(s) 192
PspGI CCWGG 1 cut(s) 192
PspN4I GGNNCC 1 cut(s) 84
PspPI GGNCC 2 cut(s) 49, 82
PvuI CGATCG 1 cut(s) 138
RsaI GTAC 1 cut(s) 167
RsaNI GTAC 1 cut(s) 166
RseI CAYNNNNRTG 1 cut(s) 158
SaqAI TTAA 2 cut(s) 147, 312
SatI GCNGC 3 cut(s) 107, 203, 267
Sau3AI GATC 2 cut(s) 135, 297
Sau96I GGNCC 2 cut(s) 49, 82
ScaI AGTACT 1 cut(s) 167
SchI GAGTC 1 cut(s) 220
ScrFI CCNGG 1 cut(s) 194
SetI ASST 3 cut(s) 23, 108, 207
SinI GGWCC 1 cut(s) 49
SmiMI CAYNNNNRTG 1 cut(s) 158
Sse9I AATT 1 cut(s) 10
SsiI CCGC 3 cut(s) 5, 86, 266
StyD4I CCNGG 1 cut(s) 192
StyI CCWWGG 1 cut(s) 45
TaqI TCGA 1 cut(s) 138
TasI AATT 1 cut(s) 10
TatI WGTACW 1 cut(s) 165
TauI GCSGC 1 cut(s) 269
Tru1I TTAA 2 cut(s) 147, 312
Tru9I TTAA 2 cut(s) 147, 312
TseFI GTSAC 1 cut(s) 24
TseI GCWGC 2 cut(s) 106, 202
Tsp45I GTSAC 1 cut(s) 24
TspDTI ATGAA 3 cut(s) 66, 194, 227
VpaK11BI GGWCC 1 cut(s) 49
XceI RCATGY 1 cut(s) 66
ZrmI AGTACT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.