Rorug05G0325900

Clathrin is the major protein of the polyhedral coat of coated pits and vesicles

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001768
Physical Location & Seq
Reverse (-)
39041428 .. 39044756
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0325900.1

Sequence Viewer

Length: 1845 bp
ATGGCGGAAATGAAACAAAGCATAGTGTTATACCCAGCATCACCTGGATCGCACCACATGGTTTCCATAGTCGAACTAGGAAAACTCATCTCCCAACGCCACCCCAACTTGTCCATAACAGTCTTGCTCGACACATCTTCCCCTCTCGCCAAATCCTCATACATCAACCATCTTCTCTCTTCTAACTCTGCTCCCGATCAAGCCCGCATCTCCTTCTTCACTCTCCCCGCACTCAGCCTCCCCCAACCCGACGCCCAAACCAGACCCGAACGCGTACACCAACTCAGGCTTCAAACTGTCCCCAATGTCCTCCAAGCCCTCAAGACCATCTCTCTCACTTCCAAAGTCCTCGCCTTTATCACGTCACTATGGCATCACCCTTACGACCCTGAAATCCCAACTTACTATTACTTCACCTCCTGCGCCTCTGCTCTTGCTCTGTTTCTGTACTTCCCCACTGTCCATGATCAAACGCCGGAGAGCTTCAAGGACCGAAACGACGACGTTGTTGAGTATCCGGGATTGCCAGCGCTCCGAGGCTCCCAAATGCCGGGTCCTATTCTCGACCGCAACGAGGCTGAATATGATTTCTTTCTCTATTTTGCTTCCTGTCTTCCAAAAGCGAAGGGAATTATAACAAACACCTTCCAAGAACTTGAGCCTCGAGCAATCAAGGCCATAAAGGAAGGTGTTTGTGTTCCTAATCATCAAACCCCGCCGTTATATCACATCGGGCCGTTGATTTCCGACTCTGAAAATAGGTCGATCCAAGGCGGTTCGCCTATGCCAACTAACTGTTCCACGTTATGGCTGGATAAGCAGCCGAGTCGGAGTGTGGTGTACTTGTGCTTTGGAAGCAGAGGTACGTTTTCTGAAGAGCAGTTTAAGGAATTGGCTATAGGCTTGGAGAGAAGCAAGTTGAGATTTTTGTGGGTTGTGAAGAGTCAACTGGATTTGGAGGTACTAATGCCACAAGGGTTCTTGGAGAGGACCAAAGATAGAGGTCTTGTAGTCACGTCTTGGGCGCCACAGGTTGCTATTCTAAGCCATGAATCTGTGGGTGGGTTTGTCACTCACTGTGGGTGGAACTCGATCACTGAAGCAGTGACTTATGGAGTGCCAATGGTGGCTTGGCCTTTGTATGCTGAGCAGGAAGTGAACAGTGTGGTGTTGGTGGAGGAAATGAAGCTGGCAATACCGGTATTTGAGGTGCCGTCGAAGTCAAAACAAGGGTTGGTGAGTGCAGATGAGGTGGAGAAGAAGGTGTTGAGGTTGATGGACATGGAGTCGGAGGAAGGGAAAAGTCTAAGAGAAAGGTGTCAAGCTGTCAAGGAAATGGGTTTGGCTGCTTGGAGAAATGGTGGCTCATCCTTCACTTCTTTTTCAGAGCTGGAGGTGTGGAATAGAGTGGGGTTGCAGGGACTTGGGGGGATGCCTTCCAATTTTCAGGAATGGCTACTGGAGATAGTATCCAATTTAAACAAGGAACAATTAAATAAGGTCTTCATGCTATTATGGGGCATTTGGAGGAGCAGAAATACCAAGATATGGGAACAAAAGGCACAACTTGTTTCTGAGGTTGTGATTTTCACTCTTGGGTGGTATGAGGAGTTTAAAATATGTCATACTCAACCTAAGGTTACAACTCAACAATCTGTGCAGTGGACCAAACCAAGTTTTGGTTGGTTGAAAATAAATTGTGATGGTGCGTATCAAGGTTCAAATCGACGTGGAGGAGCTGGTTTCGTCGTTCGAAACAGTGAGGGTGCTTTTCAGTCCGGCGCTGCTAGGCTATGTGCACAGTTGACCTCTCCGTTCCATGCGGAGTTGAGTGCACTGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04142 ko04144 ko04721 ko04961 ko05016 ko05100 map04142 map04144 map04721 map04961 map05016 map05100
Pfam Domains
Protein Families
Clathrin Clathrin-link Clathrin_H_link Clathrin_propel

Protein Analysis

614

Amino Acids

68.76

Weight (kDa)

6.56

Isoelectric Point (pI)

49.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 273 - 392 1.8e-21 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 635
AccB1I GGYRCC 2 cut(s) 1024, 1210
AccB7I CCANNNNNTGG 3 cut(s) 807, 1548, 1679
AccII CGCG 1 cut(s) 273
AciI CCGC 7 cut(s) 5, 205, 228, 568, 716, 774, 1823
AclWI GGATC 2 cut(s) 55, 760
AcuI CTGAAG 2 cut(s) 894, 1119
AcyI GRCGYC 2 cut(s) 252, 1025
AfaI GTAC 5 cut(s) 276, 449, 842, 865, 963
AfeI AGCGCT 1 cut(s) 531
AfiI CCNNNNNNNGG 5 cut(s) 550, 574, 807, 1548, 1679
AflIII ACRYGT 1 cut(s) 271
AgeI ACCGGT 1 cut(s) 1198
AgsI TTSAA 4 cut(s) 293, 487, 1690, 1722
AhdI GACNNNNNGTC 1 cut(s) 1285
AjiI CACGTC 3 cut(s) 363, 1017, 1730
AjnI CCWGG 1 cut(s) 43
AjuI GAANNNNNNNTTGG 4 cut(s) 273, 305, 781, 813
AluBI AGCT 5 cut(s) 483, 1189, 1325, 1390, 1739
AluI AGCT 5 cut(s) 483, 1189, 1325, 1390, 1739
Alw21I GWGCWC 2 cut(s) 1801, 1837
Alw44I GTGCAC 2 cut(s) 1797, 1833
AlwI GGATC 2 cut(s) 55, 760
Ama87I CYCGRG 1 cut(s) 663
Aor51HI AGCGCT 1 cut(s) 531
AoxI GGCC 3 cut(s) 675, 734, 1133
ApaLI GTGCAC 2 cut(s) 1797, 1833
ApeKI GCWGC 3 cut(s) 820, 1346, 1784
ArsI GACNNNNNNTTYG 2 cut(s) 538, 570
AsiGI ACCGGT 1 cut(s) 1198
AspLEI GCGC 4 cut(s) 425, 532, 1027, 1784
AspS9I GGNCC 5 cut(s) 490, 554, 734, 990, 1665
AsuC2I CCSGG 2 cut(s) 519, 552
AsuHPI GGTGA 4 cut(s) 33, 368, 406, 1249
AsuII TTCGAA 1 cut(s) 1753
AvaI CYCGRG 1 cut(s) 663
AvaII GGWCC 4 cut(s) 490, 554, 990, 1665
AxyI CCTNAGG 1 cut(s) 1635
BaeGI GKGCMC 2 cut(s) 1801, 1837
BanI GGYRCC 2 cut(s) 1024, 1210
BarI GAAGNNNNNNTAC 2 cut(s) 847, 879
BbsI GAAGAC 2 cut(s) 605, 1495
Bbv12I GWGCWC 2 cut(s) 1801, 1837
BbvI GCAGC 3 cut(s) 832, 1333, 1771
BccI CCATC 4 cut(s) 177, 335, 1270, 1697
BceAI ACGGC 3 cut(s) 703, 721, 1198
BcgI CGANNNNNNTGC 2 cut(s) 809, 843
BciT130I CCWGG 1 cut(s) 45
BciVI GTATCC 2 cut(s) 525, 1480
BclI TGATCA 1 cut(s) 466
BcnI CCSGG 2 cut(s) 519, 552
BfaI CTAG 2 cut(s) 77, 1788
BfmI CTRYAG 2 cut(s) 897, 1838
BfoI RGCGCY 3 cut(s) 533, 1028, 1785
BfuI GTATCC 2 cut(s) 525, 1480
BisI GCNGC 3 cut(s) 821, 1347, 1785
BlpI GCTNAGC 1 cut(s) 1146
BlsI GCNGC 3 cut(s) 822, 1348, 1786
Bme1390I CCNGG 3 cut(s) 45, 519, 552
Bme18I GGWCC 4 cut(s) 490, 554, 990, 1665
BmeRI GACNNNNNGTC 1 cut(s) 1285
BmeT110I CYCGRG 1 cut(s) 663
BmgBI CACGTC 3 cut(s) 363, 1017, 1730
BmgT120I GGNCC 5 cut(s) 490, 554, 734, 990, 1665
BmiI GGNNCC 4 cut(s) 541, 555, 1026, 1212
BmrFI CCNGG 3 cut(s) 45, 519, 552
BmsI GCATC 4 cut(s) 47, 216, 382, 1422
BpiI GAAGAC 2 cut(s) 605, 1495
BpmI CTGGAG 2 cut(s) 1412, 1481
Bpu1102I GCTNAGC 1 cut(s) 1146
Bpu14I TTCGAA 1 cut(s) 1753
BpuEI CTTGAG 2 cut(s) 305, 677
BpuMI CCSGG 2 cut(s) 519, 552
BsaHI GRCGYC 2 cut(s) 252, 1025
BsaJI CCNNGG 2 cut(s) 535, 769
BsaWI WCCGGW 1 cut(s) 1198
BsaXI ACNNNNNCTCC 6 cut(s) 222, 252, 401, 431, 1345, 1375
Bsc4I CCNNNNNNNGG 5 cut(s) 550, 574, 807, 1548, 1679
Bse118I RCCGGY 1 cut(s) 1198
Bse1I ACTGG 2 cut(s) 954, 1464
Bse21I CCTNAGG 1 cut(s) 1635
BseBI CCWGG 1 cut(s) 45
BseDI CCNNGG 2 cut(s) 535, 769
BseGI GGATG 2 cut(s) 1367, 1437
BseLI CCNNNNNNNGG 5 cut(s) 550, 574, 807, 1548, 1679
BseMII CTCAG 4 cut(s) 247, 298, 1137, 1566
BseNI ACTGG 2 cut(s) 954, 1464
BseRI GAGGAG 3 cut(s) 1543, 1622, 1749
BseSI GKGCMC 2 cut(s) 1801, 1837
BseXI GCAGC 3 cut(s) 832, 1333, 1771
BseYI CCCAGC 1 cut(s) 34
BsgI GTGCAG 2 cut(s) 1263, 1679
Bsh1236I CGCG 1 cut(s) 273
Bsh1285I CGRYCG 1 cut(s) 568
BshFI GGCC 3 cut(s) 677, 736, 1135
BshNI GGYRCC 2 cut(s) 1024, 1210
BshTI ACCGGT 1 cut(s) 1198
BsiEI CGRYCG 1 cut(s) 568
BsiHKAI GWGCWC 2 cut(s) 1801, 1837
BsiHKCI CYCGRG 1 cut(s) 663
BsiSI CCGG 5 cut(s) 476, 518, 551, 1199, 1779
BslFI GGGAC 2 cut(s) 284, 1434
BslI CCNNNNNNNGG 5 cut(s) 550, 574, 807, 1548, 1679
BsmFI GGGAC 2 cut(s) 284, 1434
BsnI GGCC 3 cut(s) 677, 736, 1135
BsoBI CYCGRG 1 cut(s) 663
Bsp119I TTCGAA 1 cut(s) 1753
Bsp1286I GDGCHC 2 cut(s) 1801, 1837
Bsp143I GATC 5 cut(s) 47, 196, 466, 765, 1092
Bsp1720I GCTNAGC 1 cut(s) 1146
BspACI CCGC 7 cut(s) 5, 205, 228, 568, 716, 774, 1823
BspANI GGCC 3 cut(s) 677, 736, 1135
BspCNI CTCAG 4 cut(s) 246, 297, 1138, 1567
BspFNI CGCG 1 cut(s) 273
BspLI GGNNCC 4 cut(s) 541, 555, 1026, 1212
BspMAI CTGCAG 1 cut(s) 1842
BspPI GGATC 2 cut(s) 55, 760
BspQI GCTCTTC 1 cut(s) 870
BspT104I TTCGAA 1 cut(s) 1753
BspT107I GGYRCC 2 cut(s) 1024, 1210
BsrFI RCCGGY 1 cut(s) 1198
BsrI ACTGG 2 cut(s) 954, 1464
BssAI RCCGGY 1 cut(s) 1198
BssECI CCNNGG 2 cut(s) 535, 769
BssMI GATC 5 cut(s) 47, 196, 466, 765, 1092
BssNI GRCGYC 2 cut(s) 252, 1025
BssT1I CCWWGG 1 cut(s) 769
Bst2UI CCWGG 1 cut(s) 45
Bst4CI ACNGT 8 cut(s) 121, 298, 460, 797, 1079, 1163, 1760, 1803
Bst6I CTCTTC 3 cut(s) 184, 870, 935
BstACI GRCGYC 2 cut(s) 252, 1025
BstBI TTCGAA 1 cut(s) 1753
BstC8I GCNNGC 3 cut(s) 205, 528, 1191
BstDEI CTNAG 7 cut(s) 233, 284, 1043, 1146, 1307, 1575, 1635
BstF5I GGATG 2 cut(s) 1367, 1437
BstFNI CGCG 1 cut(s) 273
BstH2I RGCGCY 3 cut(s) 533, 1028, 1785
BstHHI GCGC 4 cut(s) 425, 532, 1027, 1784
BstKTI GATC 5 cut(s) 50, 199, 469, 768, 1095
BstMBI GATC 5 cut(s) 47, 196, 466, 765, 1092
BstMCI CGRYCG 1 cut(s) 568
BstMWI GCNNNNNNNGC 3 cut(s) 674, 817, 855
BstNI CCWGG 1 cut(s) 45
BstSCI CCNGG 3 cut(s) 43, 517, 550
BstSFI CTRYAG 2 cut(s) 897, 1838
BstSLI GKGCMC 2 cut(s) 1801, 1837
BstUI CGCG 1 cut(s) 273
BstV1I GCAGC 3 cut(s) 832, 1333, 1771
BstV2I GAAGAC 2 cut(s) 605, 1495
Bsu36I CCTNAGG 1 cut(s) 1635
BsuI GTATCC 2 cut(s) 525, 1480
BsuRI GGCC 3 cut(s) 677, 736, 1135
BtrI CACGTC 3 cut(s) 363, 1017, 1730
BtsCI GGATG 2 cut(s) 1367, 1437
BtsI GCAGTG 3 cut(s) 1110, 1667, 1835
BtsIMutI CAGTG 8 cut(s) 456, 1075, 1095, 1110, 1168, 1667, 1765, 1835
Cac8I GCNNGC 3 cut(s) 205, 528, 1191
CfoI GCGC 4 cut(s) 425, 532, 1027, 1784
Cfr10I RCCGGY 1 cut(s) 1198
Cfr13I GGNCC 5 cut(s) 490, 554, 734, 990, 1665
CseI GACGC 1 cut(s) 260
Csp6I GTAC 5 cut(s) 275, 448, 841, 864, 962
CspAI ACCGGT 1 cut(s) 1198
CviAII CATG 6 cut(s) 58, 464, 1049, 1282, 1507, 1820
CviQI GTAC 5 cut(s) 275, 448, 841, 864, 962
DdeI CTNAG 7 cut(s) 233, 284, 1043, 1146, 1307, 1575, 1635
DinI GGCGCC 1 cut(s) 1026
DpnI GATC 5 cut(s) 49, 198, 468, 767, 1094
DpnII GATC 5 cut(s) 47, 196, 466, 765, 1092
DraI TTTAAA 2 cut(s) 1479, 1615
DriI GACNNNNNGTC 1 cut(s) 1285
Eam1104I CTCTTC 3 cut(s) 184, 870, 935
Eam1105I GACNNNNNGTC 1 cut(s) 1285
EarI CTCTTC 3 cut(s) 184, 870, 935
EciI GGCGGA 1 cut(s) 20
Eco130I CCWWGG 1 cut(s) 769
Eco47I GGWCC 4 cut(s) 490, 554, 990, 1665
Eco47III AGCGCT 1 cut(s) 531
Eco57I CTGAAG 2 cut(s) 894, 1119
Eco81I CCTNAGG 1 cut(s) 1635
Eco88I CYCGRG 1 cut(s) 663
EcoO109I RGGNCCY 1 cut(s) 554
EcoRII CCWGG 1 cut(s) 43
EcoT14I CCWWGG 1 cut(s) 769
EgeI GGCGCC 1 cut(s) 1026
EheI GGCGCC 1 cut(s) 1026
ErhI CCWWGG 1 cut(s) 769
FaeI CATG 6 cut(s) 61, 467, 1052, 1285, 1510, 1823
FaqI GGGAC 2 cut(s) 284, 1434
FatI CATG 6 cut(s) 57, 463, 1048, 1281, 1506, 1819
FauI CCCGC 3 cut(s) 212, 235, 723
FbaI TGATCA 1 cut(s) 466
Fnu4HI GCNGC 3 cut(s) 821, 1347, 1785
FokI GGATG 2 cut(s) 1354, 1444
Fsp4HI GCNGC 3 cut(s) 821, 1347, 1785
FspBI CTAG 2 cut(s) 77, 1788
GlaI GCGC 4 cut(s) 424, 531, 1026, 1783
GluI GCNGC 3 cut(s) 821, 1347, 1785
GsaI CCCAGC 1 cut(s) 38
GsuI CTGGAG 2 cut(s) 1412, 1481
HaeII RGCGCY 3 cut(s) 533, 1028, 1785
HaeIII GGCC 3 cut(s) 677, 736, 1135
HapII CCGG 5 cut(s) 476, 518, 551, 1199, 1779
HgaI GACGC 1 cut(s) 260
HhaI GCGC 4 cut(s) 425, 532, 1027, 1784
Hin1I GRCGYC 2 cut(s) 252, 1025
Hin1II CATG 6 cut(s) 61, 467, 1052, 1285, 1510, 1823
Hin6I GCGC 4 cut(s) 423, 530, 1025, 1782
HinP1I GCGC 4 cut(s) 423, 530, 1025, 1782
HincII GTYRAC 2 cut(s) 947, 1806
HindII GTYRAC 2 cut(s) 947, 1806
HinfI GANTC 5 cut(s) 749, 826, 943, 1052, 1286
HpaII CCGG 5 cut(s) 476, 518, 551, 1199, 1779
HphI GGTGA 4 cut(s) 33, 368, 406, 1249
Hpy166II GTNNAC 8 cut(s) 277, 841, 947, 1159, 1665, 1799, 1806, 1835
Hpy188I TCNGA 8 cut(s) 536, 748, 754, 831, 874, 1291, 1387, 1576
Hpy188III TCNNGA 4 cut(s) 194, 322, 563, 1448
Hpy8I GTNNAC 8 cut(s) 277, 841, 947, 1159, 1665, 1799, 1806, 1835
Hpy99I CGWCG 6 cut(s) 254, 503, 506, 1219, 1731, 1751
HpyAV CCTTC 8 cut(s) 223, 619, 655, 680, 1255, 1289, 1381, 1446
HpyCH4III ACNGT 8 cut(s) 121, 298, 460, 797, 1079, 1163, 1760, 1803
HpyCH4IV ACGT 6 cut(s) 362, 504, 803, 866, 1016, 1729
HpyCH4V TGCA 6 cut(s) 1244, 1417, 1660, 1799, 1835, 1840
HpyF10VI GCNNNNNNNGC 3 cut(s) 674, 817, 855
HpyF3I CTNAG 7 cut(s) 233, 284, 1043, 1146, 1307, 1575, 1635
HpySE526I ACGT 6 cut(s) 362, 504, 803, 866, 1016, 1729
Hsp92I GRCGYC 2 cut(s) 252, 1025
Hsp92II CATG 6 cut(s) 61, 467, 1052, 1285, 1510, 1823
HspAI GCGC 4 cut(s) 423, 530, 1025, 1782
KasI GGCGCC 1 cut(s) 1024
Ksp22I TGATCA 1 cut(s) 466
Kzo9I GATC 5 cut(s) 47, 196, 466, 765, 1092
LguI GCTCTTC 1 cut(s) 870
LmnI GCTCC 5 cut(s) 196, 537, 545, 1530, 1736
Lsp1109I GCAGC 3 cut(s) 832, 1333, 1771
LweI GCATC 4 cut(s) 47, 216, 382, 1422
MaeI CTAG 2 cut(s) 77, 1788
MaeII ACGT 6 cut(s) 362, 504, 803, 866, 1016, 1729
MaeIII GTNAC 5 cut(s) 363, 1012, 1069, 1105, 1639
MalI GATC 5 cut(s) 49, 198, 468, 767, 1094
MboI GATC 5 cut(s) 47, 196, 466, 765, 1092
MboII GAAGA 9 cut(s) 129, 164, 171, 208, 605, 887, 952, 1270, 1495
MhlI GDGCHC 2 cut(s) 1801, 1837
MluCI AATT 6 cut(s) 630, 890, 1441, 1474, 1490, 1696
MluI ACGCGT 1 cut(s) 271
Mly113I GGCGCC 1 cut(s) 1025
MlyI GAGTC 4 cut(s) 743, 835, 952, 1295
MmeI TCCRAC 3 cut(s) 771, 809, 1269
MseI TTAA 4 cut(s) 885, 1478, 1493, 1614
MspI CCGG 5 cut(s) 476, 518, 551, 1199, 1779
MspR9I CCNGG 3 cut(s) 45, 519, 552
MvaI CCWGG 1 cut(s) 45
MvnI CGCG 1 cut(s) 273
MwoI GCNNNNNNNGC 3 cut(s) 674, 817, 855
NarI GGCGCC 1 cut(s) 1025
NciI CCSGG 2 cut(s) 519, 552
NdeII GATC 5 cut(s) 47, 196, 466, 765, 1092
NlaIII CATG 6 cut(s) 61, 467, 1052, 1285, 1510, 1823
NlaIV GGNNCC 4 cut(s) 541, 555, 1026, 1212
NmeAIII GCCGAG 1 cut(s) 849
NmuCI GTSAC 4 cut(s) 363, 1012, 1069, 1105
NspV TTCGAA 1 cut(s) 1753
PaeR7I CTCGAG 1 cut(s) 663
PciSI GCTCTTC 1 cut(s) 870
PcsI WCGNNNNNNNCGW 1 cut(s) 570
PfeI GAWTC 1 cut(s) 1052
PflMI CCANNNNNTGG 3 cut(s) 807, 1548, 1679
PfoI TCCNGGA 1 cut(s) 517
PinAI ACCGGT 1 cut(s) 1198
PkrI GCNGC 3 cut(s) 822, 1348, 1786
PleI GAGTC 4 cut(s) 743, 834, 951, 1294
PluTI GGCGCC 1 cut(s) 1028
PpsI GAGTC 4 cut(s) 743, 834, 951, 1294
PpuMI RGGWCCY 1 cut(s) 554
PsiI TTATAA 1 cut(s) 635
Psp5II RGGWCCY 1 cut(s) 554
Psp6I CCWGG 1 cut(s) 43
PspFI CCCAGC 1 cut(s) 34
PspGI CCWGG 1 cut(s) 43
PspN4I GGNNCC 4 cut(s) 541, 555, 1026, 1212
PspPI GGNCC 5 cut(s) 490, 554, 734, 990, 1665
PspPPI RGGWCCY 1 cut(s) 554
PspXI VCTCGAGB 1 cut(s) 663
PstI CTGCAG 1 cut(s) 1842
RsaI GTAC 5 cut(s) 276, 449, 842, 865, 963
RsaNI GTAC 5 cut(s) 275, 448, 841, 864, 962
SapI GCTCTTC 1 cut(s) 870
SaqAI TTAA 4 cut(s) 885, 1478, 1493, 1614
SatI GCNGC 3 cut(s) 821, 1347, 1785
Sau3AI GATC 5 cut(s) 47, 196, 466, 765, 1092
Sau96I GGNCC 5 cut(s) 490, 554, 734, 990, 1665
SchI GAGTC 4 cut(s) 743, 835, 952, 1295
ScrFI CCNGG 3 cut(s) 45, 519, 552
SduI GDGCHC 2 cut(s) 1801, 1837
SfaNI GCATC 4 cut(s) 47, 216, 382, 1422
SfcI CTRYAG 2 cut(s) 897, 1838
SfoI GGCGCC 1 cut(s) 1026
Sfr274I CTCGAG 1 cut(s) 663
SfuI TTCGAA 1 cut(s) 1753
SinI GGWCC 4 cut(s) 490, 554, 990, 1665
SlaI CTCGAG 1 cut(s) 663
SmlI CTYRAG 3 cut(s) 320, 656, 663
SmoI CTYRAG 3 cut(s) 320, 656, 663
Sse9I AATT 6 cut(s) 630, 890, 1441, 1474, 1490, 1696
SsiI CCGC 7 cut(s) 5, 205, 228, 568, 716, 774, 1823
SspDI GGCGCC 1 cut(s) 1024
SspMI CTAG 2 cut(s) 77, 1788
StyD4I CCNGG 3 cut(s) 43, 517, 550
StyI CCWWGG 1 cut(s) 769
TaaI ACNGT 8 cut(s) 121, 298, 460, 797, 1079, 1163, 1760, 1803
TaiI ACGT 6 cut(s) 365, 507, 806, 869, 1019, 1732
TaqI TCGA 9 cut(s) 72, 129, 564, 664, 764, 1091, 1217, 1726, 1753
TaqII GACCGA 1 cut(s) 507
TasI AATT 6 cut(s) 630, 890, 1441, 1474, 1490, 1696
TatI WGTACW 2 cut(s) 447, 840
TfiI GAWTC 1 cut(s) 1052
Tru1I TTAA 4 cut(s) 885, 1478, 1493, 1614
Tru9I TTAA 4 cut(s) 885, 1478, 1493, 1614
TscAI CASTG 8 cut(s) 463, 1082, 1102, 1110, 1168, 1667, 1765, 1842
TseFI GTSAC 4 cut(s) 363, 1012, 1069, 1105
TseI GCWGC 3 cut(s) 820, 1346, 1784
Tsp45I GTSAC 4 cut(s) 363, 1012, 1069, 1105
TspDTI ATGAA 4 cut(s) 26, 1065, 1199, 1495
TspGWI ACGGA 1 cut(s) 1803
TspRI CASTG 8 cut(s) 463, 1082, 1102, 1110, 1168, 1667, 1765, 1842
Van91I CCANNNNNTGG 3 cut(s) 807, 1548, 1679
VneI GTGCAC 2 cut(s) 1797, 1833
VpaK11BI GGWCC 4 cut(s) 490, 554, 990, 1665
XcmI CCANNNNNNNNNTGG 3 cut(s) 808, 1128, 1680
XhoI CTCGAG 1 cut(s) 663
XspI CTAG 2 cut(s) 77, 1788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.