The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. The coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Coatomer_E | PF04733 | 68 - 110 | 1.6e-14 | Coatomer epsilon subunit |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 73, 125 |
| AclWI | GGATC | 2 cut(s) | 191, 204 |
| AcuI | CTGAAG | 2 cut(s) | 41, 278 |
| AfaI | GTAC | 1 cut(s) | 170 |
| AflIII | ACRYGT | 1 cut(s) | 173 |
| AgsI | TTSAA | 3 cut(s) | 47, 305, 341 |
| AluBI | AGCT | 3 cut(s) | 50, 82, 103 |
| AluI | AGCT | 3 cut(s) | 50, 82, 103 |
| Alw26I | GTCTC | 1 cut(s) | 61 |
| AlwI | GGATC | 2 cut(s) | 191, 204 |
| ApeKI | GCWGC | 2 cut(s) | 82, 331 |
| AseI | ATTAAT | 1 cut(s) | 120 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 51 |
| AspS9I | GGNCC | 1 cut(s) | 283 |
| AvaII | GGWCC | 1 cut(s) | 283 |
| BamHI | GGATCC | 1 cut(s) | 196 |
| BbvI | GCAGC | 2 cut(s) | 69, 318 |
| BccI | CCATC | 1 cut(s) | 246 |
| BcoDI | GTCTC | 1 cut(s) | 61 |
| BisI | GCNGC | 2 cut(s) | 83, 332 |
| BlsI | GCNGC | 2 cut(s) | 84, 333 |
| Bme18I | GGWCC | 1 cut(s) | 283 |
| BmgT120I | GGNCC | 1 cut(s) | 283 |
| BmiI | GGNNCC | 1 cut(s) | 198 |
| BseXI | GCAGC | 2 cut(s) | 69, 318 |
| BsiSI | CCGG | 1 cut(s) | 194 |
| BsmAI | GTCTC | 1 cut(s) | 61 |
| Bsp143I | GATC | 2 cut(s) | 18, 196 |
| BspACI | CCGC | 2 cut(s) | 73, 125 |
| BspLI | GGNNCC | 1 cut(s) | 198 |
| BspPI | GGATC | 2 cut(s) | 191, 204 |
| BssMI | GATC | 2 cut(s) | 18, 196 |
| BstC8I | GCNNGC | 2 cut(s) | 12, 364 |
| BstDEI | CTNAG | 1 cut(s) | 382 |
| BstKTI | GATC | 2 cut(s) | 21, 199 |
| BstMAI | GTCTC | 1 cut(s) | 61 |
| BstMBI | GATC | 2 cut(s) | 18, 196 |
| BstNSI | RCATGY | 2 cut(s) | 149, 177 |
| BstV1I | GCAGC | 2 cut(s) | 69, 318 |
| BstX2I | RGATCY | 1 cut(s) | 196 |
| BstYI | RGATCY | 1 cut(s) | 196 |
| BtsIMutI | CAGTG | 1 cut(s) | 200 |
| Cac8I | GCNNGC | 2 cut(s) | 12, 364 |
| Cfr13I | GGNCC | 1 cut(s) | 283 |
| Csp6I | GTAC | 1 cut(s) | 169 |
| CviAII | CATG | 3 cut(s) | 146, 174, 312 |
| CviJI | RGCY | 5 cut(s) | 50, 82, 103, 256, 326 |
| CviKI_1 | RGCY | 5 cut(s) | 50, 82, 103, 256, 326 |
| CviQI | GTAC | 1 cut(s) | 169 |
| DdeI | CTNAG | 1 cut(s) | 382 |
| DpnI | GATC | 2 cut(s) | 20, 198 |
| DpnII | GATC | 2 cut(s) | 18, 196 |
| Eco47I | GGWCC | 1 cut(s) | 283 |
| Eco57I | CTGAAG | 2 cut(s) | 41, 278 |
| EcoT22I | ATGCAT | 1 cut(s) | 231 |
| FaeI | CATG | 3 cut(s) | 149, 177, 315 |
| FaiI | YATR | 9 cut(s) | 95, 134, 147, 155, 175, 231, 243, 313, 369 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 39, 71 |
| FatI | CATG | 3 cut(s) | 145, 173, 311 |
| Fnu4HI | GCNGC | 2 cut(s) | 83, 332 |
| Fsp4HI | GCNGC | 2 cut(s) | 83, 332 |
| GluI | GCNGC | 2 cut(s) | 83, 332 |
| HapII | CCGG | 1 cut(s) | 194 |
| Hin1II | CATG | 3 cut(s) | 149, 177, 315 |
| HindIII | AAGCTT | 1 cut(s) | 101 |
| HinfI | GANTC | 3 cut(s) | 35, 69, 158 |
| HpaII | CCGG | 1 cut(s) | 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 171 |
| Hpy188I | TCNGA | 3 cut(s) | 40, 60, 238 |
| Hpy188III | TCNNGA | 2 cut(s) | 182, 338 |
| Hpy8I | GTNNAC | 1 cut(s) | 171 |
| Hpy99I | CGWCG | 1 cut(s) | 35 |
| HpyAV | CCTTC | 1 cut(s) | 253 |
| HpyCH4V | TGCA | 2 cut(s) | 229, 268 |
| HpyF3I | CTNAG | 1 cut(s) | 382 |
| Hsp92II | CATG | 3 cut(s) | 149, 177, 315 |
| Kzo9I | GATC | 2 cut(s) | 18, 196 |
| LpnPI | CCDG | 4 cut(s) | 49, 207, 308, 360 |
| Lsp1109I | GCAGC | 2 cut(s) | 69, 318 |
| MaeIII | GTNAC | 1 cut(s) | 148 |
| MalI | GATC | 2 cut(s) | 20, 198 |
| MboI | GATC | 2 cut(s) | 18, 196 |
| MboII | GAAGA | 1 cut(s) | 47 |
| MflI | RGATCY | 1 cut(s) | 196 |
| MluCI | AATT | 2 cut(s) | 90, 128 |
| MlyI | GAGTC | 3 cut(s) | 44, 63, 167 |
| MmeI | TCCRAC | 1 cut(s) | 63 |
| MnlI | CCTC | 3 cut(s) | 25, 230, 274 |
| Mph1103I | ATGCAT | 1 cut(s) | 231 |
| MroXI | GAANNNNTTC | 1 cut(s) | 51 |
| MseI | TTAA | 3 cut(s) | 89, 120, 293 |
| MspI | CCGG | 1 cut(s) | 194 |
| NdeII | GATC | 2 cut(s) | 18, 196 |
| NlaIII | CATG | 3 cut(s) | 149, 177, 315 |
| NlaIV | GGNNCC | 1 cut(s) | 198 |
| NsiI | ATGCAT | 1 cut(s) | 231 |
| NspI | RCATGY | 2 cut(s) | 149, 177 |
| PciI | ACATGT | 1 cut(s) | 173 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 14, 36 |
| PdmI | GAANNNNTTC | 1 cut(s) | 51 |
| PkrI | GCNGC | 2 cut(s) | 84, 333 |
| PleI | GAGTC | 3 cut(s) | 43, 63, 166 |
| PpsI | GAGTC | 3 cut(s) | 43, 63, 166 |
| PscI | ACATGT | 1 cut(s) | 173 |
| PshBI | ATTAAT | 1 cut(s) | 120 |
| PspN4I | GGNNCC | 1 cut(s) | 198 |
| PspPI | GGNCC | 1 cut(s) | 283 |
| PsuI | RGATCY | 1 cut(s) | 196 |
| RsaI | GTAC | 1 cut(s) | 170 |
| RsaNI | GTAC | 1 cut(s) | 169 |
| SaqAI | TTAA | 3 cut(s) | 89, 120, 293 |
| SatI | GCNGC | 2 cut(s) | 83, 332 |
| Sau3AI | GATC | 2 cut(s) | 18, 196 |
| Sau96I | GGNCC | 1 cut(s) | 283 |
| SchI | GAGTC | 3 cut(s) | 44, 63, 167 |
| SetI | ASST | 5 cut(s) | 52, 84, 105, 236, 293 |
| SinI | GGWCC | 1 cut(s) | 283 |
| Sse9I | AATT | 2 cut(s) | 90, 128 |
| SsiI | CCGC | 2 cut(s) | 73, 125 |
| SspI | AATATT | 1 cut(s) | 216 |
| TaqI | TCGA | 3 cut(s) | 17, 33, 78 |
| TasI | AATT | 2 cut(s) | 90, 128 |
| TatI | WGTACW | 1 cut(s) | 168 |
| Tru1I | TTAA | 3 cut(s) | 89, 120, 293 |
| Tru9I | TTAA | 3 cut(s) | 89, 120, 293 |
| TscAI | CASTG | 1 cut(s) | 207 |
| TseI | GCWGC | 2 cut(s) | 82, 331 |
| TspDTI | ATGAA | 2 cut(s) | 16, 121 |
| TspRI | CASTG | 1 cut(s) | 207 |
| VpaK11BI | GGWCC | 1 cut(s) | 283 |
| VspI | ATTAAT | 1 cut(s) | 120 |
| XceI | RCATGY | 2 cut(s) | 149, 177 |
| XmnI | GAANNNNTTC | 1 cut(s) | 51 |
| Zsp2I | ATGCAT | 1 cut(s) | 231 |