Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001616

Physical Location & Seq

Genomic Coordinates Reverse (-)

11938675 .. 11964815

Gene Structure 26141 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0089800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1377 bp

ATGAGTGAGACACAGAGACTCTCAATGGCTATTGTTCCATTCCAGGAACACATACCCTCTTGTTCACCCCCCAAGTTCAACACCGAGAGGCCACTAAAGGAGAAGGAACATGTTTTCAGGGACAAGTCTTCATGTCTCAGAGAGATAACCAACGTGGTCAATGCTAATACCATGAAGTCTGAAAGTGACAAACTGAAGAGATGTAAGAAAGCTACTGTAGAAAGCTTGTATGATACTTCTGAAGCTCAGTGTTCTGTTATGGAGAGAGCGAAGAAGCTTGAAGCCAATCTAGCACCGGAGTTCCCTAGAGTGGCCAAAGTTATGCGCCCATCAAATGTCACTGGATGCTTCTGTCTTAATCTTCCTAAGAAATTTTGCGGTGATCATTTGCCAAAGCAGGATACAATGATTGTTTTAGAAGATGAAAGTGGGAGAGAATTCCAGACGAAATATCTTGTGGGAAAGGCTGGACTTAGTGCTGGATGGAGAGGATTTTCAATTGCTCACAAGTTATTGGCTGGAGATGTTGTAGTTTTCCAGCGAGTTACTCCTTCCAAATTTAAGGTGTATATTGTTCGATCAAAGGGTTCAGATGAATCGGATTGCTCTCTTGGCCTTATGAACCTAGGTGTTTGCATTAAAGAAATGGATACTGGGGACATTACTACTTGTGAAGGGGCAGAATATGAGGATATTAGACCTATTTCGGTGGAAAATCCTCAAAACTATAACACCATAGCCTGCAATACTAAATCCAGTCCGATTGCTGATCTGTCTGAAAATGATACTGGAGGTCTTGGTTCTGAAGTGTTTGATGGAATTGGACTCGCAGAGTCTGTGATTCCTTTCAAAGAAGTGAGCTCCTTGGAGAACTTCAACATCATCGTCGATGGTTTCATCATAAATTCCGAGTTTCCCAAACCAGTTTTGGCTAAGTACTATGACCTTTGCTGCAGTCAAAACGCATACCTTCATGAACATCTTCTGGATGGTCTTAATTGGCAACTCATAACCGGGGCAATTTCTGAAATAACAACCATCGCAGAAGGCATAAGGACCTGCAAGGCTTCCACATTAGAATGTAATTTTCCAACTTGGAATAAGACTCTACAGGCCTTTGAGGTGTTTGGCATGAATGTTGGTTTCCTGCGTACCCGGCTAGACAAGCTTGCAAGTCTCGCTTCAGAGTCAAAAAGAGGTAAAGAGGCAAGACATGAAAGGGAACAAGCAGAAGTAGAGATGAGAACCTTGGAGGCAAAGCTGTTGGAAGTGAAAAGGACCATAAGCAGGCTGTTGGAAGTAGAGACTGAGACTCAAAATGTGAGTTCAGAAAAGCTTGAGGATATGCTCCAACAAGTGGCTAAGGCCCCTTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006810 GO:0007275 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0008380 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009790 GO:0009791 GO:0009793 GO:0009892 GO:0009987 GO:0010154 GO:0010467 GO:0010468 GO:0010494 GO:0010496 GO:0010497 GO:0010501 GO:0010605 GO:0010608 GO:0010629 GO:0016070 GO:0016071 GO:0016441 GO:0016458 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019222 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035770 GO:0036464 GO:0040029 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0048316 GO:0048519 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0051179 GO:0051234 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1990904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DEAD DSHCT Helicase_C

Protein Analysis

458

Amino Acids

51.17

Weight (kDa)

5.64

Isoelectric Point (pI)

36.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B3	PF02362	105 - 193	4.1e-15	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001616)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr2g0102891
rosa_laevigata	RLG00000003325 RLG00000010663 RLG00000014743 RLG00000021608 RLG00000028731
rosa_multiflora	Rmu_co8212272.1_g000001 Rmu_co8257291.1_g000001 Rmu_sc0000375.1_g000004 Rmu_sc0001619.1_g000004 Rmu_sc0002160.1_g000017 Rmu_sc0002960.1_g000003 Rmu_sc0004031.1_g000010 Rmu_sc0011657.1_g000008 Rmu_sc0014046.1_g000004
rosa_roxburghii	Rroxscaffold_1G00024170 Rroxscaffold_2G00149140 Rroxscaffold_5G00382470
rosa_rugosa	Rorug02G0226400 Rorug02G0226500 Rorug04G0046600 Rorug05G0408800 Rorug05G0408900 Rorug06G0089500 Rorug06G0089600 Rorug06G0089700.1 Rorug06G0089800
rosa_samantha	Rh1BG120900 Rh2AG219500 Rh2AG390100 Rh2BG229500 Rh2CG165000 Rh2DG225900 Rh2DG381600 Rh3BG369300 Rh3CG331600 Rh3DG328600 Rh4AG016000 Rh4AG058100 Rh4BG056900 Rh4CG112600 Rh4CG219300 Rh4CG219400 Rh4DG021700 Rh5DG477800 Rh5DG495600 Rh7AG221500 Rh7AG324600 Rh7CG341400
rosa_wichuraiana	Rw1G015160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1067
AccB7I	CCANNNNNTGG	1 cut(s)	1357
AciI	CCGC	1 cut(s)	378
AcoI	YGGCCR	1 cut(s)	312
AcsI	RAATTY	4 cut(s)	371, 437, 557, 904
AcuI	CTGAAG	4 cut(s)	215, 261, 825, 1167
AfaI	GTAC	2 cut(s)	938, 1153
AfiI	CCNNNNNNNGG	3 cut(s)	310, 1287, 1357
AflIII	ACRYGT	1 cut(s)	109
AgsI	TTSAA	5 cut(s)	79, 281, 498, 850, 877
AjnI	CCWGG	1 cut(s)	42
AluBI	AGCT	8 cut(s)	212, 225, 245, 277, 861, 1168, 1261, 1336
AluI	AGCT	8 cut(s)	212, 225, 245, 277, 861, 1168, 1261, 1336
Alw21I	GWGCWC	1 cut(s)	863
Alw26I	GTCTC	6 cut(s)	2, 10, 140, 1181, 1298, 1304
AlwNI	CAGNNNCTG	1 cut(s)	836
AoxI	GGCC	5 cut(s)	89, 312, 613, 1113, 1365
ApeKI	GCWGC	1 cut(s)	951
ApoI	RAATTY	4 cut(s)	371, 437, 557, 904
Asp700I	GAANNNNTTC	1 cut(s)	981
AspA2I	CCTAGG	1 cut(s)	625
AspLEI	GCGC	1 cut(s)	327
AspS9I	GGNCC	3 cut(s)	1056, 1278, 1366
AsuC2I	CCSGG	2 cut(s)	1015, 1156
AsuHPI	GGTGA	2 cut(s)	57, 392
AvaII	GGWCC	2 cut(s)	1056, 1278
AvrII	CCTAGG	1 cut(s)	625
BalI	TGGCCA	1 cut(s)	314
BanII	GRGCYC	1 cut(s)	863
BbsI	GAAGAC	1 cut(s)	120
Bbv12I	GWGCWC	1 cut(s)	863
BbvI	GCAGC	1 cut(s)	938
BccI	CCATC	6 cut(s)	337, 477, 809, 884, 983, 1046
BciT130I	CCWGG	1 cut(s)	44
BciVI	GTATCC	2 cut(s)	394, 643
BclI	TGATCA	1 cut(s)	382
BcnI	CCSGG	2 cut(s)	1015, 1156
BcoDI	GTCTC	6 cut(s)	2, 10, 140, 1181, 1298, 1304
BfaI	CTAG	4 cut(s)	290, 306, 626, 1160
BfmI	CTRYAG	3 cut(s)	216, 952, 1109
BfuAI	ACCTGC	1 cut(s)	1067
BfuI	GTATCC	2 cut(s)	394, 643
BisI	GCNGC	1 cut(s)	952
BlnI	CCTAGG	1 cut(s)	625
BlsI	GCNGC	1 cut(s)	953
BmcAI	AGTACT	1 cut(s)	938
Bme1390I	CCNGG	3 cut(s)	44, 1015, 1156
Bme18I	GGWCC	2 cut(s)	1056, 1278
BmgT120I	GGNCC	3 cut(s)	1056, 1278, 1366
BmiI	GGNNCC	1 cut(s)	1368
BmrFI	CCNGG	3 cut(s)	44, 1015, 1156
BmrI	ACTGGG	1 cut(s)	663
BmsI	GCATC	1 cut(s)	335
BmuI	ACTGGG	1 cut(s)	663
BpiI	GAAGAC	1 cut(s)	120
BpmI	CTGGAG	2 cut(s)	540, 810
Bpu10I	CCTNAGC	1 cut(s)	1362
BpuEI	CTTGAG	1 cut(s)	1358
BpuMI	CCSGG	2 cut(s)	1015, 1156
BsaJI	CCNNGG	5 cut(s)	625, 864, 1014, 1248, 1370
BsaWI	WCCGGW	1 cut(s)	295
BsaXI	ACNNNNNCTCC	2 cut(s)	513, 543
Bsc4I	CCNNNNNNNGG	3 cut(s)	310, 1287, 1357
Bse1I	ACTGG	5 cut(s)	346, 658, 756, 793, 923
BseBI	CCWGG	1 cut(s)	44
BseDI	CCNNGG	5 cut(s)	625, 864, 1014, 1248, 1370
BseGI	GGATG	3 cut(s)	350, 488, 994
BseLI	CCNNNNNNNGG	3 cut(s)	310, 1287, 1357
BseMII	CTCAG	3 cut(s)	151, 260, 1299
BseNI	ACTGG	5 cut(s)	346, 658, 756, 793, 923
BseXI	GCAGC	1 cut(s)	938
BshFI	GGCC	5 cut(s)	91, 314, 615, 1115, 1367
BsiHKAI	GWGCWC	1 cut(s)	863
BsiSI	CCGG	3 cut(s)	296, 1014, 1156
BslFI	GGGAC	2 cut(s)	134, 671
BslI	CCNNNNNNNGG	3 cut(s)	310, 1287, 1357
BsmAI	GTCTC	6 cut(s)	2, 10, 140, 1181, 1298, 1304
BsmFI	GGGAC	2 cut(s)	134, 671
BsnI	GGCC	5 cut(s)	91, 314, 615, 1115, 1367
Bsp1286I	GDGCHC	1 cut(s)	863
Bsp143I	GATC	3 cut(s)	382, 578, 769
BspACI	CCGC	1 cut(s)	378
BspANI	GGCC	5 cut(s)	91, 314, 615, 1115, 1367
BspCNI	CTCAG	3 cut(s)	150, 259, 1300
BspHI	TCATGA	1 cut(s)	973
BspLI	GGNNCC	1 cut(s)	1368
BspMAI	CTGCAG	1 cut(s)	956
BspMI	ACCTGC	1 cut(s)	1067
BsrI	ACTGG	5 cut(s)	346, 658, 756, 793, 923
BssECI	CCNNGG	5 cut(s)	625, 864, 1014, 1248, 1370
BssMI	GATC	3 cut(s)	382, 578, 769
BssT1I	CCWWGG	4 cut(s)	625, 864, 1248, 1370
Bst2UI	CCWGG	1 cut(s)	44
Bst4CI	ACNGT	1 cut(s)	217
Bst6I	CTCTTC	1 cut(s)	191
BstC8I	GCNNGC	3 cut(s)	742, 1170, 1289
BstDEI	CTNAG	7 cut(s)	137, 246, 366, 473, 933, 1308, 1362
BstF5I	GGATG	3 cut(s)	350, 488, 994
BstHHI	GCGC	1 cut(s)	327
BstKTI	GATC	3 cut(s)	385, 581, 772
BstMAI	GTCTC	6 cut(s)	2, 10, 140, 1181, 1298, 1304
BstMBI	GATC	3 cut(s)	382, 578, 769
BstMWI	GCNNNNNNNGC	5 cut(s)	290, 612, 1156, 1165, 1178
BstNI	CCWGG	1 cut(s)	44
BstNSI	RCATGY	1 cut(s)	113
BstSCI	CCNGG	3 cut(s)	42, 1013, 1154
BstSFI	CTRYAG	3 cut(s)	216, 952, 1109
BstV1I	GCAGC	1 cut(s)	938
BstV2I	GAAGAC	1 cut(s)	120
BsuI	GTATCC	2 cut(s)	394, 643
BsuRI	GGCC	5 cut(s)	91, 314, 615, 1115, 1367
BtgZI	GCGATG	1 cut(s)	1024
BtsCI	GGATG	3 cut(s)	350, 488, 994
BtsIMutI	CAGTG	2 cut(s)	254, 339
BveI	ACCTGC	1 cut(s)	1067
Cac8I	GCNNGC	3 cut(s)	742, 1170, 1289
CaiI	CAGNNNCTG	1 cut(s)	836
CciI	TCATGA	1 cut(s)	973
CfoI	GCGC	1 cut(s)	327
Cfr13I	GGNCC	3 cut(s)	1056, 1278, 1366
Csp6I	GTAC	2 cut(s)	937, 1152
CviAII	CATG	6 cut(s)	110, 132, 172, 974, 1132, 1214
CviQI	GTAC	2 cut(s)	937, 1152
DdeI	CTNAG	7 cut(s)	137, 246, 366, 473, 933, 1308, 1362
DpnI	GATC	3 cut(s)	384, 580, 771
DpnII	GATC	3 cut(s)	382, 578, 769
EaeI	YGGCCR	1 cut(s)	312
Eam1104I	CTCTTC	1 cut(s)	191
EarI	CTCTTC	1 cut(s)	191
Ecl136II	GAGCTC	1 cut(s)	861
Eco130I	CCWWGG	4 cut(s)	625, 864, 1248, 1370
Eco147I	AGGCCT	1 cut(s)	1115
Eco24I	GRGCYC	1 cut(s)	863
Eco47I	GGWCC	2 cut(s)	1056, 1278
Eco53kI	GAGCTC	1 cut(s)	861
Eco57I	CTGAAG	4 cut(s)	215, 261, 825, 1167
EcoICRI	GAGCTC	1 cut(s)	861
EcoO109I	RGGNCCY	2 cut(s)	1056, 1366
EcoRI	GAATTC	1 cut(s)	437
EcoRII	CCWGG	1 cut(s)	42
EcoT14I	CCWWGG	4 cut(s)	625, 864, 1248, 1370
EcoT38I	GRGCYC	1 cut(s)	863
ErhI	CCWWGG	4 cut(s)	625, 864, 1248, 1370
FaeI	CATG	6 cut(s)	113, 135, 175, 977, 1135, 1217
FalI	AAGNNNNNCTT	2 cut(s)	1165, 1197
FaqI	GGGAC	2 cut(s)	134, 671
FatI	CATG	6 cut(s)	109, 131, 171, 973, 1131, 1213
FbaI	TGATCA	1 cut(s)	382
Fnu4HI	GCNGC	1 cut(s)	952
FokI	GGATG	3 cut(s)	357, 495, 1001
FriOI	GRGCYC	1 cut(s)	863
Fsp4HI	GCNGC	1 cut(s)	952
FspBI	CTAG	4 cut(s)	290, 306, 626, 1160
GlaI	GCGC	1 cut(s)	326
GluI	GCNGC	1 cut(s)	952
GsuI	CTGGAG	2 cut(s)	540, 810
HaeIII	GGCC	5 cut(s)	91, 314, 615, 1115, 1367
HapII	CCGG	3 cut(s)	296, 1014, 1156
HhaI	GCGC	1 cut(s)	327
Hin1II	CATG	6 cut(s)	113, 135, 175, 977, 1135, 1217
Hin6I	GCGC	1 cut(s)	325
HinP1I	GCGC	1 cut(s)	325
HindIII	AAGCTT	4 cut(s)	223, 275, 1166, 1334
HinfI	GANTC	8 cut(s)	18, 596, 825, 833, 841, 1105, 1187, 1312
HpaII	CCGG	3 cut(s)	296, 1014, 1156
HphI	GGTGA	2 cut(s)	57, 392
Hpy166II	GTNNAC	1 cut(s)	65
Hpy188III	TCNNGA	3 cut(s)	442, 974, 986
Hpy8I	GTNNAC	1 cut(s)	65
Hpy99I	CGWCG	1 cut(s)	890
HpyAV	CCTTC	5 cut(s)	97, 561, 668, 980, 1040
HpyCH4III	ACNGT	1 cut(s)	217
HpyCH4IV	ACGT	1 cut(s)	153
HpyCH4V	TGCA	5 cut(s)	636, 744, 954, 1062, 1172
HpyF10VI	GCNNNNNNNGC	5 cut(s)	290, 612, 1156, 1165, 1178
HpyF3I	CTNAG	7 cut(s)	137, 246, 366, 473, 933, 1308, 1362
HpySE526I	ACGT	1 cut(s)	153
Hsp92II	CATG	6 cut(s)	113, 135, 175, 977, 1135, 1217
HspAI	GCGC	1 cut(s)	325
Ksp22I	TGATCA	1 cut(s)	382
Kzo9I	GATC	3 cut(s)	382, 578, 769
LmnI	GCTCC	2 cut(s)	866, 1353
Lsp1109I	GCAGC	1 cut(s)	938
LweI	GCATC	1 cut(s)	335
MaeI	CTAG	4 cut(s)	290, 306, 626, 1160
MaeII	ACGT	1 cut(s)	153
MaeIII	GTNAC	3 cut(s)	185, 337, 544
MalI	GATC	3 cut(s)	384, 580, 771
MboI	GATC	3 cut(s)	382, 578, 769
MboII	GAAGA	6 cut(s)	120, 208, 283, 353, 431, 974
MfeI	CAATTG	1 cut(s)	498
MhlI	GDGCHC	1 cut(s)	863
MlsI	TGGCCA	1 cut(s)	314
MluCI	AATT	9 cut(s)	371, 437, 498, 557, 819, 904, 997, 1020, 1084
MluNI	TGGCCA	1 cut(s)	314
MlyI	GAGTC	6 cut(s)	12, 819, 842, 1099, 1196, 1306
MmeI	TCCRAC	4 cut(s)	1115, 1245, 1275, 1375
Mox20I	TGGCCA	1 cut(s)	314
MroXI	GAANNNNTTC	1 cut(s)	981
MscI	TGGCCA	1 cut(s)	314
MseI	TTAA	4 cut(s)	357, 561, 639, 996
MslI	CAYNNNNRTG	1 cut(s)	1078
Msp20I	TGGCCA	1 cut(s)	314
MspI	CCGG	3 cut(s)	296, 1014, 1156
MspR9I	CCNGG	3 cut(s)	44, 1015, 1156
MunI	CAATTG	1 cut(s)	498
MvaI	CCWGG	1 cut(s)	44
MwoI	GCNNNNNNNGC	5 cut(s)	290, 612, 1156, 1165, 1178
NciI	CCSGG	2 cut(s)	1015, 1156
NdeII	GATC	3 cut(s)	382, 578, 769
NlaIII	CATG	6 cut(s)	113, 135, 175, 977, 1135, 1217
NlaIV	GGNNCC	1 cut(s)	1368
NmuCI	GTSAC	2 cut(s)	185, 337
NspI	RCATGY	1 cut(s)	113
PagI	TCATGA	1 cut(s)	973
PceI	AGGCCT	1 cut(s)	1115
PciI	ACATGT	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	981
PfeI	GAWTC	2 cut(s)	596, 841
PflMI	CCANNNNNTGG	1 cut(s)	1357
PfoI	TCCNGGA	1 cut(s)	42
PkrI	GCNGC	1 cut(s)	953
PleI	GAGTC	6 cut(s)	12, 819, 841, 1099, 1195, 1306
PpsI	GAGTC	6 cut(s)	12, 819, 841, 1099, 1195, 1306
PpuMI	RGGWCCY	1 cut(s)	1056
PscI	ACATGT	1 cut(s)	109
Psp124BI	GAGCTC	1 cut(s)	863
Psp5II	RGGWCCY	1 cut(s)	1056
Psp6I	CCWGG	1 cut(s)	42
PspGI	CCWGG	1 cut(s)	42
PspN4I	GGNNCC	1 cut(s)	1368
PspPI	GGNCC	3 cut(s)	1056, 1278, 1366
PspPPI	RGGWCCY	1 cut(s)	1056
PstI	CTGCAG	1 cut(s)	956
PstNI	CAGNNNCTG	1 cut(s)	836
RsaI	GTAC	2 cut(s)	938, 1153
RsaNI	GTAC	2 cut(s)	937, 1152
RseI	CAYNNNNRTG	1 cut(s)	1078
SacI	GAGCTC	1 cut(s)	863
SaqAI	TTAA	4 cut(s)	357, 561, 639, 996
SatI	GCNGC	1 cut(s)	952
Sau3AI	GATC	3 cut(s)	382, 578, 769
Sau96I	GGNCC	3 cut(s)	1056, 1278, 1366
ScaI	AGTACT	1 cut(s)	938
SchI	GAGTC	6 cut(s)	12, 819, 842, 1099, 1196, 1306
ScrFI	CCNGG	3 cut(s)	44, 1015, 1156
SduI	GDGCHC	1 cut(s)	863
SfaNI	GCATC	1 cut(s)	335
SfcI	CTRYAG	3 cut(s)	216, 952, 1109
SinI	GGWCC	2 cut(s)	1056, 1278
SmiMI	CAYNNNNRTG	1 cut(s)	1078
SmlI	CTYRAG	1 cut(s)	1337
SmoI	CTYRAG	1 cut(s)	1337
Sse9I	AATT	9 cut(s)	371, 437, 498, 557, 819, 904, 997, 1020, 1084
SseBI	AGGCCT	1 cut(s)	1115
SsiI	CCGC	1 cut(s)	378
SspMI	CTAG	4 cut(s)	290, 306, 626, 1160
SstI	GAGCTC	1 cut(s)	863
StuI	AGGCCT	1 cut(s)	1115
StyD4I	CCNGG	3 cut(s)	42, 1013, 1154
StyI	CCWWGG	4 cut(s)	625, 864, 1248, 1370
TaaI	ACNGT	1 cut(s)	217
TaiI	ACGT	1 cut(s)	156
TaqI	TCGA	2 cut(s)	577, 888
TasI	AATT	9 cut(s)	371, 437, 498, 557, 819, 904, 997, 1020, 1084
TatI	WGTACW	1 cut(s)	936
TfiI	GAWTC	2 cut(s)	596, 841
Tru1I	TTAA	4 cut(s)	357, 561, 639, 996
Tru9I	TTAA	4 cut(s)	357, 561, 639, 996
TscAI	CASTG	2 cut(s)	254, 346
TseFI	GTSAC	2 cut(s)	185, 337
TseI	GCWGC	1 cut(s)	951
Tsp45I	GTSAC	2 cut(s)	185, 337
TspRI	CASTG	2 cut(s)	254, 346
Van91I	CCANNNNNTGG	1 cut(s)	1357
VpaK11BI	GGWCC	2 cut(s)	1056, 1278
XapI	RAATTY	4 cut(s)	371, 437, 557, 904
XceI	RCATGY	1 cut(s)	113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	925
XmaJI	CCTAGG	1 cut(s)	625
XmnI	GAANNNNTTC	1 cut(s)	981
XspI	CTAG	4 cut(s)	290, 306, 626, 1160
ZrmI	AGTACT	1 cut(s)	938

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.