Rh4CG219400

acyl-activating enzyme

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
45305277 .. 45305585
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG219400.1

Sequence Viewer

Length: 309 bp
ATGTACAGTTCGGGCTCGACGGGGAAGCCGAAAGGTGTTTGTGGCACTGAACAAGGTCTTTGGAATCGGTTTCTGTGGATGCAAGAATTGTATCCACTGAATGGAGAGGAGGTTTTGTTGTTCAAGATAGCAATAAGCTTTGTTGATCACTTTCAAGAATTTCTTAACGCTATTCTTACTGGTTCTGCTTTGGTTATACCTCCTTTCAATCAACTTAAACAGAATGTGTTCTCCATTGTGGATTTTCTACAGGTACATGACCTTCGCTTATTGTTTGTTTGGCTTTTCATACTCGGATTATATTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

102

Amino Acids

11.7

Weight (kDa)

5.5

Isoelectric Point (pI)

32.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 1 - 86 3.8e-10 AMP-binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 101
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 2 cut(s) 5, 255
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 3 cut(s) 124, 155, 208
AluBI AGCT 1 cut(s) 138
AluI AGCT 1 cut(s) 138
ApoI RAATTY 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 17
BarI GAAGNNNNNNTAC 2 cut(s) 246, 278
BciVI GTATCC 1 cut(s) 102
BclI TGATCA 1 cut(s) 145
BfmI CTRYAG 1 cut(s) 248
BfuI GTATCC 1 cut(s) 102
BmsI GCATC 1 cut(s) 69
BsaXI ACNNNNNCTCC 4 cut(s) 96, 101, 126, 131
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 184
BseGI GGATG 1 cut(s) 84
BseLI CCNNNNNNNGG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 184
BseRI GAGGAG 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 17
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 1 cut(s) 145
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 184
BssMI GATC 1 cut(s) 145
Bst4CI ACNGT 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 3
BstF5I GGATG 1 cut(s) 84
BstKTI GATC 1 cut(s) 148
BstMBI GATC 1 cut(s) 145
BstSFI CTRYAG 1 cut(s) 248
BsuI GTATCC 1 cut(s) 102
BtsCI GGATG 1 cut(s) 84
BtsIMutI CAGTG 2 cut(s) 45, 95
Csp6I GTAC 2 cut(s) 4, 254
CviAII CATG 1 cut(s) 257
CviJI RGCY 4 cut(s) 15, 28, 138, 283
CviKI_1 RGCY 4 cut(s) 15, 28, 138, 283
CviQI GTAC 2 cut(s) 4, 254
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eco24I GRGCYC 1 cut(s) 17
EcoT38I GRGCYC 1 cut(s) 17
FaeI CATG 1 cut(s) 260
FaiI YATR 4 cut(s) 197, 258, 290, 301
FalI AAGNNNNNCTT 2 cut(s) 147, 179
FatI CATG 1 cut(s) 256
FbaI TGATCA 1 cut(s) 145
FokI GGATG 1 cut(s) 91
FriOI GRGCYC 1 cut(s) 17
Hin1II CATG 1 cut(s) 260
HindIII AAGCTT 1 cut(s) 136
HinfI GANTC 1 cut(s) 64
Hpy188I TCNGA 1 cut(s) 296
Hpy188III TCNNGA 3 cut(s) 124, 155, 306
Hpy99I CGWCG 1 cut(s) 22
HpyAV CCTTC 1 cut(s) 272
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 1 cut(s) 82
Hsp92II CATG 1 cut(s) 260
Ksp22I TGATCA 1 cut(s) 145
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 2 cut(s) 165, 236
LweI GCATC 1 cut(s) 69
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 17
MluCI AATT 2 cut(s) 86, 158
MnlI CCTC 3 cut(s) 100, 103, 210
MroXI GAANNNNTTC 1 cut(s) 227
MseI TTAA 2 cut(s) 165, 216
NdeII GATC 1 cut(s) 145
NlaIII CATG 1 cut(s) 260
PcsI WCGNNNNNNNCGW 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 227
PfeI GAWTC 1 cut(s) 64
PflMI CCANNNNNTGG 1 cut(s) 101
RsaI GTAC 2 cut(s) 5, 255
RsaNI GTAC 2 cut(s) 4, 254
SaqAI TTAA 2 cut(s) 165, 216
Sau3AI GATC 1 cut(s) 145
SduI GDGCHC 1 cut(s) 17
SetI ASST 7 cut(s) 37, 58, 114, 140, 202, 255, 264
SfaNI GCATC 1 cut(s) 69
SfcI CTRYAG 1 cut(s) 248
Sse9I AATT 2 cut(s) 86, 158
TaaI ACNGT 1 cut(s) 8
TaqI TCGA 1 cut(s) 17
TasI AATT 2 cut(s) 86, 158
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 2 cut(s) 165, 216
Tru9I TTAA 2 cut(s) 165, 216
TscAI CASTG 2 cut(s) 52, 102
TspDTI ATGAA 1 cut(s) 277
TspRI CASTG 2 cut(s) 52, 102
Van91I CCANNNNNTGG 1 cut(s) 101
XapI RAATTY 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.