Rh2BG229500

acyl-activating enzyme

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
22502445 .. 22502696
252 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG229500.1

Sequence Viewer

Length: 252 bp
ATGTACAGTTCGGGCTCGACGGGGAAGCCGAAAGGTGTTTGTGGCACTGACCAAGGTCTTTGGAATCGGTTTTTGTGGATGCAAGAATTGTATCCACTAAATGGAGAGGAGGTTTTGTTGTTCAAGACAGCAATAAGCTTTGTTGATCACTTTCAAGAATTTCTTAGTGCTATTCTTACTGGTTCTGCTTTAGTTATACCTCCTTTCAATCAACTTAAACAGAATGTGTTCTCCATTATGGATTTTCTACAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

84

Amino Acids

9.49

Weight (kDa)

5.05

Isoelectric Point (pI)

30.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AMP-binding PF00501 1 - 73 4e-10 AMP-binding enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 101
AcsI RAATTY 1 cut(s) 158
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 101
AgsI TTSAA 3 cut(s) 124, 155, 208
AluBI AGCT 1 cut(s) 138
AluI AGCT 1 cut(s) 138
ApoI RAATTY 1 cut(s) 158
Asp700I GAANNNNTTC 1 cut(s) 227
BanII GRGCYC 1 cut(s) 17
BciVI GTATCC 1 cut(s) 102
BclI TGATCA 1 cut(s) 145
BfmI CTRYAG 1 cut(s) 248
BfuI GTATCC 1 cut(s) 102
BmsI GCATC 1 cut(s) 69
BoxI GACNNNNGTC 1 cut(s) 54
BsaJI CCNNGG 1 cut(s) 52
BsaXI ACNNNNNCTCC 4 cut(s) 96, 101, 126, 131
Bsc4I CCNNNNNNNGG 1 cut(s) 101
Bse1I ACTGG 1 cut(s) 184
BseDI CCNNGG 1 cut(s) 52
BseGI GGATG 1 cut(s) 84
BseLI CCNNNNNNNGG 1 cut(s) 101
BseNI ACTGG 1 cut(s) 184
BseRI GAGGAG 1 cut(s) 122
BslI CCNNNNNNNGG 1 cut(s) 101
Bsp1286I GDGCHC 1 cut(s) 17
Bsp1407I TGTACA 1 cut(s) 3
Bsp143I GATC 1 cut(s) 145
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 1 cut(s) 184
BssECI CCNNGG 1 cut(s) 52
BssMI GATC 1 cut(s) 145
BssT1I CCWWGG 1 cut(s) 52
Bst4CI ACNGT 1 cut(s) 8
BstAUI TGTACA 1 cut(s) 3
BstDEI CTNAG 1 cut(s) 164
BstF5I GGATG 1 cut(s) 84
BstKTI GATC 1 cut(s) 148
BstMBI GATC 1 cut(s) 145
BstPAI GACNNNNGTC 1 cut(s) 54
BstSFI CTRYAG 1 cut(s) 248
BsuI GTATCC 1 cut(s) 102
BtsCI GGATG 1 cut(s) 84
BtsIMutI CAGTG 1 cut(s) 45
Csp6I GTAC 1 cut(s) 4
CviJI RGCY 3 cut(s) 15, 28, 138
CviKI_1 RGCY 3 cut(s) 15, 28, 138
CviQI GTAC 1 cut(s) 4
DdeI CTNAG 1 cut(s) 164
DpnI GATC 1 cut(s) 147
DpnII GATC 1 cut(s) 145
Eco130I CCWWGG 1 cut(s) 52
Eco24I GRGCYC 1 cut(s) 17
EcoT14I CCWWGG 1 cut(s) 52
EcoT38I GRGCYC 1 cut(s) 17
ErhI CCWWGG 1 cut(s) 52
FaiI YATR 2 cut(s) 197, 239
FalI AAGNNNNNCTT 2 cut(s) 147, 179
FbaI TGATCA 1 cut(s) 145
FokI GGATG 1 cut(s) 91
FriOI GRGCYC 1 cut(s) 17
HindIII AAGCTT 1 cut(s) 136
HinfI GANTC 1 cut(s) 64
Hpy188III TCNNGA 2 cut(s) 124, 155
Hpy99I CGWCG 1 cut(s) 22
HpyCH4III ACNGT 1 cut(s) 8
HpyCH4V TGCA 1 cut(s) 82
HpyF3I CTNAG 1 cut(s) 164
Ksp22I TGATCA 1 cut(s) 145
Kzo9I GATC 1 cut(s) 145
LpnPI CCDG 1 cut(s) 165
LweI GCATC 1 cut(s) 69
MalI GATC 1 cut(s) 147
MboI GATC 1 cut(s) 145
MhlI GDGCHC 1 cut(s) 17
MluCI AATT 2 cut(s) 86, 158
MnlI CCTC 3 cut(s) 100, 103, 210
MroXI GAANNNNTTC 1 cut(s) 227
MseI TTAA 1 cut(s) 216
NdeII GATC 1 cut(s) 145
PcsI WCGNNNNNNNCGW 1 cut(s) 26
PdmI GAANNNNTTC 1 cut(s) 227
PfeI GAWTC 1 cut(s) 64
PflMI CCANNNNNTGG 1 cut(s) 101
PshAI GACNNNNGTC 1 cut(s) 54
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
SaqAI TTAA 1 cut(s) 216
Sau3AI GATC 1 cut(s) 145
SduI GDGCHC 1 cut(s) 17
SetI ASST 5 cut(s) 37, 58, 114, 140, 202
SfaNI GCATC 1 cut(s) 69
SfcI CTRYAG 1 cut(s) 248
SgeI CNNG 8 cut(s) 24, 28, 33, 65, 95, 136, 167, 192
Sse9I AATT 2 cut(s) 86, 158
StyI CCWWGG 1 cut(s) 52
TaaI ACNGT 1 cut(s) 8
TaqI TCGA 1 cut(s) 17
TasI AATT 2 cut(s) 86, 158
TatI WGTACW 1 cut(s) 3
TfiI GAWTC 1 cut(s) 64
Tru1I TTAA 1 cut(s) 216
Tru9I TTAA 1 cut(s) 216
TscAI CASTG 1 cut(s) 52
TspRI CASTG 1 cut(s) 52
Van91I CCANNNNNTGG 1 cut(s) 101
XapI RAATTY 1 cut(s) 158
XmnI GAANNNNTTC 1 cut(s) 227
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.