Rorug07G0111400

Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0001187
Physical Location & Seq
Reverse (-)
8686824 .. 8693898
7075 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0111400.1

Sequence Viewer

Length: 1956 bp
ATGGGGAAGAAAGCGAAGAAGCCCGGAAAGGGAAAAGAGAAGACGGAGAAGAAAACAGCCAAAGCTGAGGAGAAGAGAGCTCGCAGAGACACCAAGAAGCTCTCTCCCGAGGACGACATCGATGCCATTTTGCTGAGTATACAAAAGGAGGAAGCCAAGAAGAAGGAAGTCCATGTTGAGGAAAATGTCCCAGCTCCTTCTCCGCGTTCCAACTGCACCCTGAGCGTCAATCCCTTGAAAGAGACAGAGTTAATCCTTTACGGGGGTGAATTCTACAATGGTAATAAGACGTTTGTCTATGGCGATTTTTACCGGTACGATGTTGAAAAGCAGGAATGGAAGTTAATTTCAAGCCCTAATAGTCCACCCCCTCGTAGTGCTCACCAGGCTGTCACCTGGAAGAACTATATTTACATCTTCGGTGGTGAATTTACTTCCCCAAACCAAGAGAGGTTCCATCACTATAAGGACTTTTGGATGTTGGATCTCAAAACAAATCAATGGGAACAGCTAAACTTAAAAGGGAGTCCAAGTCCACGCTCAGGTCATCGAATGGTATTGTACAAGCACAAGATTATTGTTTTTGGCGGCTTCTATGACACTCTAAGAGAAGTGAGGTATCATAATGATCTTTATGTATTTGACCTGGACCAGTTCAAGTGGCAAGAAATAACCCCTAGGCCTGGGGCCATGTGGCCAAGTGCACGAAGTGGCTTTCAATTTTTTGTTTACCAAGATGAGATCTTTCTATATGGTGGCTATTCCAAAGAAGTTTCATCTGATAAAACCAGCTCTGAGAAAGGAATTGTTCATTCAGACTTGTGGTCCCTTGATCCTAGGACATGGGAATGGAACAAGGTAAAAAAAAGTGGGATGCCTCCTGGACCTCGCGCTGGGTTTTCCATGTGTGTTCATAAGAAGCGAGCTTTGCTATTTGGGGGTGTAGTGGACATGGAAGTTCAAGGTGATGTAATGATGAGCTTGTTCTTGGACGAACTTTATGGCTTCCAATTAGACAACCATCGCTGGTACCCATTGGAGCTACGGAAGGGGAAGTCAACAAAAGATAAGGTAAAAAAAAGTTCTGGACGAAAACGTAATAATGATGGTGATGATAAAATAGATACAACTGAACAAGAGGAGTCTAAAGAAAATGGCAAAGATGAGAATTCTGAATACGATGAAGAAGTAGGCGACTCGGGGAGCAAAATTGATGGTATATCGCAGCAAATGGCTACAGCCATGAATGTTGATGATTCTGATTTACCAGAGATAGTGAAGCCCTGTGGACGTATCAATTCCTGCATGGTTGTTGGAAGAGATACATTATATGTTTATGGAGGAATGATGGAGGTCAAGGATCAAGAAATTACACTGGATGACTTGTATTCTCTTAATCTTAGCAAACTTGATGAGTGGAAGTGCATCATACCGGCATCGCAATCTGAATGGGTTGAGGCCTCTGAAGATGAAGATGAGGATGAGGATGAGGACGAGGATGAAGATGAGGATGAAGATGAAGATGAGGATGAAGATGAGGAGACTGATGATGATAATGACGGAGAGAGTGGTAAAGGTGGATCGCTTCAAATGGGGGAAGCTGTTGCTTTAATCAAGGGCGGGGGAAAGACTCTGCGGAGGAAAGAGAAACGGGCCAGAATAGAGCAGATTAGAGCCAGTCTTGGCCTTTCAGATTCGCAAAGAACCCCAATGCCTGGTGAATCTTTGAGAGATTTCTACAAACGTACAAATATGTACTGGCAAATGGCAGCCCACGAACATACCCAACACACTGGAAAGGAGCTCCGTAAGGATGGCTTTGATCTTGCTGAAGCTCGATACACAGAGCTTAAACCAATTCTGGACGAGTTGGCCATATTAGAGGCAGAGCAGAAGGCTGAAGAGCAAGAAGCTGAAACCAGTACTAGTGCTAGGAAGAGAGGCAAGAAAAGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00940 ko01100 ko01110 map00940 map01100 map01110
Pfam Domains
Protein Families
peroxidase

Protein Analysis

651

Amino Acids

74.77

Weight (kDa)

5.08

Isoelectric Point (pI)

49.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Kelch_KLHDC2_KLHL20_DRC7 PF24681 41 - 253 2.4e-41 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_FBX42 PF13415 57 - 199 9.8e-28 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 86 - 173 1e-14 Attractin/LZTR1 beta-propeller
NANM PF24996 102 - 224 6.4e-10 N-acetylneuraminate epimerase
Kelch_FKB95 PF25210 110 - 265 2.8e-09 FKB95, Kelch-repeats domain
Beta-prop_TYW4 PF13418 122 - 322 5.9e-07 tRNA wybutosine-synthesizing protein 4, beta-propeller
Beta-prop_ATRN-LZTR1 PF24981 155 - 227 8.4e-14 Attractin/LZTR1 beta-propeller
Kelch_1 PF01344 179 - 226 2.6e-06 Kelch motif
Beta-prop_FBX42 PF13415 191 - 261 2.5e-09 FBX42, beta-propeller domain
Beta-prop_ATRN-LZTR1 PF24981 209 - 290 5.9e-10 Attractin/LZTR1 beta-propeller
Beta-prop_FBX42 PF13415 265 - 349 1.6e-12 FBX42, beta-propeller domain
Kelch_KLHDC2_KLHL20_DRC7 PF24681 271 - 348 7.7e-12 KLHDC2/KLHL20/DRC7 Kelch-repeats domain
Beta-prop_ATRN-LZTR1 PF24981 273 - 350 2.2e-06 Attractin/LZTR1 beta-propeller
DUF4110 PF13422 562 - 646 9.1e-30 Domain of unknown function (DUF4110)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1029
AccB1I GGYRCC 1 cut(s) 1029
AccB7I CCANNNNNTGG 1 cut(s) 1715
AccI GTMKAC 1 cut(s) 139
AccII CGCG 2 cut(s) 205, 891
AciI CCGC 4 cut(s) 203, 588, 1620, 1636
AclWI GGATC 4 cut(s) 492, 827, 1368, 1588
AcoI YGGCCR 2 cut(s) 695, 1872
AcsI RAATTY 3 cut(s) 269, 428, 1168
AcuI CTGAAG 3 cut(s) 1485, 1851, 1920
AdeI CACNNNGTG 1 cut(s) 710
AfaI GTAC 6 cut(s) 317, 563, 1031, 1747, 1757, 1924
AfiI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 893, 1715
AgeI ACCGGT 1 cut(s) 312
AgsI TTSAA 7 cut(s) 238, 326, 351, 658, 719, 962, 1589
AhdI GACNNNNNGTC 1 cut(s) 823
AhlI ACTAGT 1 cut(s) 1925
AjnI CCWGG 6 cut(s) 384, 395, 645, 682, 880, 1714
Alw21I GWGCWC 4 cut(s) 82, 382, 706, 1806
Alw26I GTCTC 3 cut(s) 81, 236, 1535
Alw44I GTGCAC 1 cut(s) 702
AlwI GGATC 4 cut(s) 492, 827, 1368, 1588
Ama87I CYCGRG 2 cut(s) 107, 1198
AoxI GGCC 7 cut(s) 680, 687, 695, 1458, 1653, 1684, 1872
ApaLI GTGCAC 1 cut(s) 702
ApeKI GCWGC 2 cut(s) 1225, 1769
ApoI RAATTY 3 cut(s) 269, 428, 1168
AsiGI ACCGGT 1 cut(s) 312
Asp718I GGTACC 1 cut(s) 1029
AspA2I CCTAGG 2 cut(s) 677, 836
AspLEI GCGC 1 cut(s) 893
AspS9I GGNCC 5 cut(s) 649, 687, 825, 884, 1653
AsuC2I CCSGG 1 cut(s) 24
AsuHPI GGTGA 7 cut(s) 278, 374, 385, 437, 977, 1121, 1730
AvaI CYCGRG 2 cut(s) 107, 1198
AvaII GGWCC 3 cut(s) 649, 825, 884
AvrII CCTAGG 2 cut(s) 677, 836
BaeGI GKGCMC 1 cut(s) 706
BalI TGGCCA 2 cut(s) 697, 1874
BanI GGYRCC 1 cut(s) 1029
BanII GRGCYC 2 cut(s) 82, 1806
BbsI GAAGAC 1 cut(s) 47
Bbv12I GWGCWC 4 cut(s) 82, 382, 706, 1806
BbvCI CCTCAGC 1 cut(s) 66
BbvI GCAGC 2 cut(s) 1237, 1781
BccI CCATC 6 cut(s) 465, 1029, 1100, 1208, 1342, 1808
BcgI CGANNNNNNTGC 2 cut(s) 104, 138
BciT130I CCWGG 6 cut(s) 386, 397, 647, 684, 882, 1716
BcnI CCSGG 1 cut(s) 24
BcoDI GTCTC 3 cut(s) 81, 236, 1535
BcuI ACTAGT 1 cut(s) 1925
BfaI CTAG 4 cut(s) 678, 837, 1926, 1932
BfmI CTRYAG 1 cut(s) 1236
BglII AGATCT 1 cut(s) 741
BisI GCNGC 3 cut(s) 589, 1226, 1770
BlnI CCTAGG 2 cut(s) 677, 836
BlsI GCNGC 3 cut(s) 590, 1227, 1771
BmcAI AGTACT 1 cut(s) 1924
Bme1390I CCNGG 7 cut(s) 24, 386, 397, 647, 684, 882, 1716
Bme18I GGWCC 3 cut(s) 649, 825, 884
BmeRI GACNNNNNGTC 1 cut(s) 823
BmeT110I CYCGRG 2 cut(s) 107, 1198
BmgT120I GGNCC 5 cut(s) 649, 687, 825, 884, 1653
BmiI GGNNCC 4 cut(s) 455, 688, 827, 1031
BmrFI CCNGG 7 cut(s) 24, 386, 397, 647, 684, 882, 1716
BmsI GCATC 4 cut(s) 112, 864, 1434, 1445
BoxI GACNNNNGTC 1 cut(s) 293
BpiI GAAGAC 1 cut(s) 47
Bpu10I CCTNAGC 3 cut(s) 66, 221, 541
BpuMI CCSGG 1 cut(s) 24
Bsa29I ATCGAT 1 cut(s) 120
BsaJI CCNNGG 4 cut(s) 108, 677, 683, 836
BsaWI WCCGGW 1 cut(s) 312
BsaXI ACNNNNNCTCC 2 cut(s) 517, 547
Bsc4I CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 893, 1715
Bse118I RCCGGY 2 cut(s) 312, 1432
Bse1I ACTGG 6 cut(s) 652, 1380, 1677, 1763, 1798, 1920
BseBI CCWGG 6 cut(s) 386, 397, 647, 684, 882, 1716
BseCI ATCGAT 1 cut(s) 120
BseDI CCNNGG 4 cut(s) 108, 677, 683, 836
BseGI GGATG 9 cut(s) 483, 879, 1384, 1486, 1492, 1504, 1516, 1534, 1819
BseLI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 893, 1715
BseMII CTCAG 5 cut(s) 57, 125, 212, 555, 786
BseNI ACTGG 6 cut(s) 652, 1380, 1677, 1763, 1798, 1920
BseRI GAGGAG 3 cut(s) 83, 1154, 1553
BseSI GKGCMC 1 cut(s) 706
BseXI GCAGC 2 cut(s) 1237, 1781
BseYI CCCAGC 2 cut(s) 190, 893
BsgI GTGCAG 1 cut(s) 199
Bsh1236I CGCG 2 cut(s) 205, 891
BshFI GGCC 7 cut(s) 682, 689, 697, 1460, 1655, 1686, 1874
BshNI GGYRCC 1 cut(s) 1029
BshTI ACCGGT 1 cut(s) 312
BshVI ATCGAT 1 cut(s) 120
BsiHKAI GWGCWC 4 cut(s) 82, 382, 706, 1806
BsiHKCI CYCGRG 2 cut(s) 107, 1198
BsiSI CCGG 3 cut(s) 24, 313, 1433
BslFI GGGAC 2 cut(s) 173, 811
BslI CCNNNNNNNGG 7 cut(s) 29, 178, 262, 542, 683, 893, 1715
BsmAI GTCTC 3 cut(s) 81, 236, 1535
BsmFI GGGAC 2 cut(s) 173, 811
BsnI GGCC 7 cut(s) 682, 689, 697, 1460, 1655, 1686, 1874
BsoBI CYCGRG 2 cut(s) 107, 1198
Bsp1286I GDGCHC 4 cut(s) 82, 382, 706, 1806
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
BspACI CCGC 4 cut(s) 203, 588, 1620, 1636
BspANI GGCC 7 cut(s) 682, 689, 697, 1460, 1655, 1686, 1874
BspCNI CTCAG 5 cut(s) 58, 126, 213, 554, 787
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 2 cut(s) 205, 891
BspLI GGNNCC 4 cut(s) 455, 688, 827, 1031
BspPI GGATC 4 cut(s) 492, 827, 1368, 1588
BspQI GCTCTTC 1 cut(s) 1896
BspT107I GGYRCC 1 cut(s) 1029
BsrFI RCCGGY 2 cut(s) 312, 1432
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 6 cut(s) 652, 1380, 1677, 1763, 1798, 1920
BssAI RCCGGY 2 cut(s) 312, 1432
BssECI CCNNGG 4 cut(s) 108, 677, 683, 836
BssMI GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
BssNAI GTATAC 1 cut(s) 140
BssT1I CCWWGG 2 cut(s) 677, 836
Bst1107I GTATAC 1 cut(s) 140
Bst2UI CCWGG 6 cut(s) 386, 397, 647, 684, 882, 1716
Bst6I CTCTTC 4 cut(s) 68, 1312, 1896, 1931
BstAUI TGTACA 1 cut(s) 561
BstC8I GCNNGC 2 cut(s) 82, 924
BstDEI CTNAG 7 cut(s) 66, 134, 221, 541, 605, 795, 1400
BstF5I GGATG 9 cut(s) 483, 879, 1384, 1486, 1492, 1504, 1516, 1534, 1819
BstFNI CGCG 2 cut(s) 205, 891
BstHHI GCGC 1 cut(s) 893
BstKTI GATC 7 cut(s) 487, 631, 744, 835, 1363, 1583, 1825
BstMAI GTCTC 3 cut(s) 81, 236, 1535
BstMBI GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
BstMWI GCNNNNNNNGC 3 cut(s) 222, 386, 928
BstNI CCWGG 6 cut(s) 386, 397, 647, 684, 882, 1716
BstPAI GACNNNNGTC 1 cut(s) 293
BstSCI CCNGG 7 cut(s) 22, 384, 395, 645, 682, 880, 1714
BstSFI CTRYAG 1 cut(s) 1236
BstSLI GKGCMC 1 cut(s) 706
BstUI CGCG 2 cut(s) 205, 891
BstV1I GCAGC 2 cut(s) 1237, 1781
BstV2I GAAGAC 1 cut(s) 47
BstX2I RGATCY 2 cut(s) 484, 741
BstXI CCANNNNNNTGG 1 cut(s) 1793
BstYI RGATCY 2 cut(s) 484, 741
BstZ17I GTATAC 1 cut(s) 140
Bsu15I ATCGAT 1 cut(s) 120
BsuRI GGCC 7 cut(s) 682, 689, 697, 1460, 1655, 1686, 1874
BsuTUI ATCGAT 1 cut(s) 120
BtgZI GCGATG 2 cut(s) 1007, 1422
BtsCI GGATG 9 cut(s) 483, 879, 1384, 1486, 1492, 1504, 1516, 1534, 1819
BtsIMutI CAGTG 2 cut(s) 1373, 1791
Cac8I GCNNGC 2 cut(s) 82, 924
CfoI GCGC 1 cut(s) 893
Cfr10I RCCGGY 2 cut(s) 312, 1432
Cfr13I GGNCC 5 cut(s) 649, 687, 825, 884, 1653
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 1 cut(s) 214
Csp6I GTAC 6 cut(s) 316, 562, 1030, 1746, 1756, 1923
CspAI ACCGGT 1 cut(s) 312
CviAII CATG 7 cut(s) 173, 691, 843, 904, 952, 1243, 1306
CviQI GTAC 6 cut(s) 316, 562, 1030, 1746, 1756, 1923
DdeI CTNAG 7 cut(s) 66, 134, 221, 541, 605, 795, 1400
DpnI GATC 7 cut(s) 486, 630, 743, 834, 1362, 1582, 1824
DpnII GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
DraIII CACNNNGTG 1 cut(s) 710
DriI GACNNNNNGTC 1 cut(s) 823
EaeI YGGCCR 2 cut(s) 695, 1872
Eam1104I CTCTTC 4 cut(s) 68, 1312, 1896, 1931
Eam1105I GACNNNNNGTC 1 cut(s) 823
EarI CTCTTC 4 cut(s) 68, 1312, 1896, 1931
Ecl136II GAGCTC 2 cut(s) 80, 1804
Eco130I CCWWGG 2 cut(s) 677, 836
Eco147I AGGCCT 2 cut(s) 682, 1460
Eco24I GRGCYC 2 cut(s) 82, 1806
Eco47I GGWCC 3 cut(s) 649, 825, 884
Eco53kI GAGCTC 2 cut(s) 80, 1804
Eco57I CTGAAG 3 cut(s) 1485, 1851, 1920
Eco88I CYCGRG 2 cut(s) 107, 1198
EcoICRI GAGCTC 2 cut(s) 80, 1804
EcoRI GAATTC 2 cut(s) 269, 1168
EcoRII CCWGG 6 cut(s) 384, 395, 645, 682, 880, 1714
EcoT14I CCWWGG 2 cut(s) 677, 836
EcoT38I GRGCYC 2 cut(s) 82, 1806
ErhI CCWWGG 2 cut(s) 677, 836
FaeI CATG 7 cut(s) 176, 694, 846, 907, 955, 1246, 1309
FalI AAGNNNNNCTT 2 cut(s) 1802, 1834
FaqI GGGAC 2 cut(s) 173, 811
FatI CATG 7 cut(s) 172, 690, 842, 903, 951, 1242, 1305
FauI CCCGC 1 cut(s) 1613
FblI GTMKAC 1 cut(s) 139
Fnu4HI GCNGC 3 cut(s) 589, 1226, 1770
FokI GGATG 9 cut(s) 490, 886, 1391, 1493, 1499, 1511, 1523, 1541, 1826
FriOI GRGCYC 2 cut(s) 82, 1806
Fsp4HI GCNGC 3 cut(s) 589, 1226, 1770
FspBI CTAG 4 cut(s) 678, 837, 1926, 1932
GlaI GCGC 1 cut(s) 892
GluI GCNGC 3 cut(s) 589, 1226, 1770
GsaI CCCAGC 2 cut(s) 194, 897
HaeIII GGCC 7 cut(s) 682, 689, 697, 1460, 1655, 1686, 1874
HapII CCGG 3 cut(s) 24, 313, 1433
HgaI GACGC 1 cut(s) 214
HhaI GCGC 1 cut(s) 893
Hin1II CATG 7 cut(s) 176, 694, 846, 907, 955, 1246, 1309
Hin6I GCGC 1 cut(s) 891
HinP1I GCGC 1 cut(s) 891
HincII GTYRAC 1 cut(s) 1059
HindII GTYRAC 1 cut(s) 1059
HinfI GANTC 7 cut(s) 526, 1142, 1196, 1256, 1630, 1694, 1721
HpaII CCGG 3 cut(s) 24, 313, 1433
HphI GGTGA 7 cut(s) 278, 374, 385, 437, 977, 1121, 1730
Hpy166II GTNNAC 8 cut(s) 140, 365, 536, 704, 730, 949, 1059, 1289
Hpy188I TCNGA 8 cut(s) 781, 796, 817, 1174, 1261, 1447, 1465, 1693
Hpy188III TCNNGA 4 cut(s) 107, 1086, 1364, 1862
Hpy8I GTNNAC 8 cut(s) 140, 365, 536, 704, 730, 949, 1059, 1289
HpyAV CCTTC 4 cut(s) 157, 207, 1042, 1888
HpyCH4IV ACGT 4 cut(s) 290, 1096, 1291, 1744
HpyCH4V TGCA 4 cut(s) 216, 704, 1305, 1425
HpyF10VI GCNNNNNNNGC 3 cut(s) 222, 386, 928
HpyF3I CTNAG 7 cut(s) 66, 134, 221, 541, 605, 795, 1400
HpySE526I ACGT 4 cut(s) 290, 1096, 1291, 1744
Hsp92II CATG 7 cut(s) 176, 694, 846, 907, 955, 1246, 1309
HspAI GCGC 1 cut(s) 891
KpnI GGTACC 1 cut(s) 1033
Kzo9I GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
LguI GCTCTTC 1 cut(s) 1896
LmnI GCTCC 5 cut(s) 199, 1039, 1203, 1801, 1809
Lsp1109I GCAGC 2 cut(s) 1237, 1781
LweI GCATC 4 cut(s) 112, 864, 1434, 1445
MaeI CTAG 4 cut(s) 678, 837, 1926, 1932
MaeII ACGT 4 cut(s) 290, 1096, 1291, 1744
MaeIII GTNAC 1 cut(s) 391
MalI GATC 7 cut(s) 486, 630, 743, 834, 1362, 1582, 1824
MboI GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
MflI RGATCY 2 cut(s) 484, 741
MhlI GDGCHC 4 cut(s) 82, 382, 706, 1806
MlsI TGGCCA 2 cut(s) 697, 1874
MluNI TGGCCA 2 cut(s) 697, 1874
MlyI GAGTC 4 cut(s) 535, 1151, 1190, 1624
MmeI TCCRAC 3 cut(s) 234, 462, 1294
Mox20I TGGCCA 2 cut(s) 697, 1874
MscI TGGCCA 2 cut(s) 697, 1874
MseI TTAA 6 cut(s) 251, 344, 518, 1395, 1610, 1851
MslI CAYNNNNRTG 1 cut(s) 847
Msp20I TGGCCA 2 cut(s) 697, 1874
MspI CCGG 3 cut(s) 24, 313, 1433
MspR9I CCNGG 7 cut(s) 24, 386, 397, 647, 684, 882, 1716
MvaI CCWGG 6 cut(s) 386, 397, 647, 684, 882, 1716
MvnI CGCG 2 cut(s) 205, 891
MwoI GCNNNNNNNGC 3 cut(s) 222, 386, 928
NciI CCSGG 1 cut(s) 24
NdeII GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
NlaIII CATG 7 cut(s) 176, 694, 846, 907, 955, 1246, 1309
NlaIV GGNNCC 4 cut(s) 455, 688, 827, 1031
NmuCI GTSAC 1 cut(s) 391
PceI AGGCCT 2 cut(s) 682, 1460
PciSI GCTCTTC 1 cut(s) 1896
PfeI GAWTC 3 cut(s) 1256, 1694, 1721
PflMI CCANNNNNTGG 1 cut(s) 1715
PfoI TCCNGGA 1 cut(s) 880
PinAI ACCGGT 1 cut(s) 312
PkrI GCNGC 3 cut(s) 590, 1227, 1771
PleI GAGTC 4 cut(s) 534, 1150, 1190, 1624
PpsI GAGTC 4 cut(s) 534, 1150, 1190, 1624
PshAI GACNNNNGTC 1 cut(s) 293
Psp124BI GAGCTC 2 cut(s) 82, 1806
Psp6I CCWGG 6 cut(s) 384, 395, 645, 682, 880, 1714
PspFI CCCAGC 2 cut(s) 190, 893
PspGI CCWGG 6 cut(s) 384, 395, 645, 682, 880, 1714
PspN4I GGNNCC 4 cut(s) 455, 688, 827, 1031
PspPI GGNCC 5 cut(s) 649, 687, 825, 884, 1653
PsrI GAACNNNNNNTAC 2 cut(s) 395, 427
PsuI RGATCY 2 cut(s) 484, 741
RsaI GTAC 6 cut(s) 317, 563, 1031, 1747, 1757, 1924
RsaNI GTAC 6 cut(s) 316, 562, 1030, 1746, 1756, 1923
RseI CAYNNNNRTG 1 cut(s) 847
SacI GAGCTC 2 cut(s) 82, 1806
SapI GCTCTTC 1 cut(s) 1896
SaqAI TTAA 6 cut(s) 251, 344, 518, 1395, 1610, 1851
SatI GCNGC 3 cut(s) 589, 1226, 1770
Sau3AI GATC 7 cut(s) 484, 628, 741, 832, 1360, 1580, 1822
Sau96I GGNCC 5 cut(s) 649, 687, 825, 884, 1653
ScaI AGTACT 1 cut(s) 1924
SchI GAGTC 4 cut(s) 535, 1151, 1190, 1624
ScrFI CCNGG 7 cut(s) 24, 386, 397, 647, 684, 882, 1716
SduI GDGCHC 4 cut(s) 82, 382, 706, 1806
SfaNI GCATC 4 cut(s) 112, 864, 1434, 1445
SfcI CTRYAG 1 cut(s) 1236
SinI GGWCC 3 cut(s) 649, 825, 884
SmiMI CAYNNNNRTG 1 cut(s) 847
SpeI ACTAGT 1 cut(s) 1925
SseBI AGGCCT 2 cut(s) 682, 1460
SsiI CCGC 4 cut(s) 203, 588, 1620, 1636
SspMI CTAG 4 cut(s) 678, 837, 1926, 1932
SstI GAGCTC 2 cut(s) 82, 1806
StuI AGGCCT 2 cut(s) 682, 1460
StyD4I CCNGG 7 cut(s) 22, 384, 395, 645, 682, 880, 1714
StyI CCWWGG 2 cut(s) 677, 836
TaiI ACGT 4 cut(s) 293, 1099, 1294, 1747
TaqI TCGA 3 cut(s) 120, 550, 1837
TatI WGTACW 3 cut(s) 561, 1755, 1922
TauI GCSGC 1 cut(s) 591
TfiI GAWTC 3 cut(s) 1256, 1694, 1721
Tru1I TTAA 6 cut(s) 251, 344, 518, 1395, 1610, 1851
Tru9I TTAA 6 cut(s) 251, 344, 518, 1395, 1610, 1851
TscAI CASTG 2 cut(s) 1380, 1798
TseFI GTSAC 1 cut(s) 391
TseI GCWGC 2 cut(s) 1225, 1769
Tsp45I GTSAC 1 cut(s) 391
TspGWI ACGGA 4 cut(s) 59, 1060, 1575, 1796
TspRI CASTG 2 cut(s) 1380, 1798
Van91I CCANNNNNTGG 1 cut(s) 1715
VneI GTGCAC 1 cut(s) 702
VpaK11BI GGWCC 3 cut(s) 649, 825, 884
XapI RAATTY 3 cut(s) 269, 428, 1168
XmaJI CCTAGG 2 cut(s) 677, 836
XmiI GTMKAC 1 cut(s) 139
XspI CTAG 4 cut(s) 678, 837, 1926, 1932
ZrmI AGTACT 1 cut(s) 1924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.