Rh2CG299400

Heparan-alpha-glucosaminide N-acetyltransferase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0002800
Physical Location & Seq
Forward (+)
34727118 .. 34739423
12306 bp
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UTR
Exon/CDS
Intron
Rh2CG299400.1

Sequence Viewer

Length: 363 bp
ATGGATGGGCATTCTACAGGCGTCTGTCTCCCACAGAGAATTGCAATAGTATATTTAGTAGCTGCCTTGTGCGAGATTTGGCTAAAGGGTGATGGTACTGTTAGTTCAGGATCATCTTTGCTCAGGAAGTATAAACTTCAGTTGTCATCGGAACAGAGTTCTGCACTAGACTATGTCATCCACGTCTATCGTAGTCTAGGCCTCGCCTTGGACTTATTTGAGGTTCGGATTACACACTTGCTTTTCCTTGCGCACCAGATTGGAGACCTTGACATCATACCCCTGCTTGCAAGACGCGTCAGTCAGAGTACTTCGTGTGGAAACCCAAAGCTGATTCCAAGATTCAAAACCCATAAAAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00531 ko01100 ko04142 map00531 map01100 map04142
Pfam Domains
Protein Families
DUF1624

Protein Analysis

120

Amino Acids

13.29

Weight (kDa)

9.15

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 300
Acc16I TGCGCA 1 cut(s) 252
AccII CGCG 1 cut(s) 297
AclWI GGATC 1 cut(s) 118
AcuI CTGAAG 1 cut(s) 122
AcyI GRCGYC 1 cut(s) 21
AfaI GTAC 2 cut(s) 97, 310
AfiI CCNNNNNNNGG 1 cut(s) 208
AflIII ACRYGT 1 cut(s) 295
AgsI TTSAA 1 cut(s) 346
AjiI CACGTC 1 cut(s) 184
AluBI AGCT 2 cut(s) 62, 331
AluI AGCT 2 cut(s) 62, 331
Alw26I GTCTC 2 cut(s) 32, 258
AlwI GGATC 1 cut(s) 118
AoxI GGCC 1 cut(s) 199
ApeKI GCWGC 1 cut(s) 62
AspLEI GCGC 1 cut(s) 253
AsuHPI GGTGA 1 cut(s) 101
BbvI GCAGC 1 cut(s) 49
BccI CCATC 1 cut(s) 86
BcoDI GTCTC 2 cut(s) 32, 258
BfaI CTAG 2 cut(s) 167, 197
BfmI CTRYAG 1 cut(s) 15
BisI GCNGC 1 cut(s) 63
BlsI GCNGC 1 cut(s) 64
BmcAI AGTACT 1 cut(s) 310
BmgBI CACGTC 1 cut(s) 184
Bpu10I CCTNAGC 1 cut(s) 122
BsaHI GRCGYC 1 cut(s) 21
BsaI GGTCTC 1 cut(s) 258
BsaJI CCNNGG 1 cut(s) 207
Bsc4I CCNNNNNNNGG 1 cut(s) 208
BseDI CCNNGG 1 cut(s) 207
BseGI GGATG 2 cut(s) 10, 177
BseLI CCNNNNNNNGG 1 cut(s) 208
BseMII CTCAG 1 cut(s) 136
BseXI GCAGC 1 cut(s) 49
BsgI GTGCAG 1 cut(s) 147
Bsh1236I CGCG 1 cut(s) 297
BshFI GGCC 1 cut(s) 201
BslI CCNNNNNNNGG 1 cut(s) 208
BsmAI GTCTC 2 cut(s) 32, 258
BsmI GAATGC 1 cut(s) 10
BsnI GGCC 1 cut(s) 201
Bso31I GGTCTC 1 cut(s) 258
Bsp143I GATC 1 cut(s) 110
BspANI GGCC 1 cut(s) 201
BspCNI CTCAG 1 cut(s) 135
BspFNI CGCG 1 cut(s) 297
BspPI GGATC 1 cut(s) 118
BspTNI GGTCTC 1 cut(s) 258
BssECI CCNNGG 1 cut(s) 207
BssMI GATC 1 cut(s) 110
BssNI GRCGYC 1 cut(s) 21
BssT1I CCWWGG 1 cut(s) 207
Bst4CI ACNGT 1 cut(s) 100
BstACI GRCGYC 1 cut(s) 21
BstC8I GCNNGC 1 cut(s) 288
BstDEI CTNAG 1 cut(s) 122
BstF5I GGATG 2 cut(s) 10, 177
BstFNI CGCG 1 cut(s) 297
BstHHI GCGC 1 cut(s) 253
BstKTI GATC 1 cut(s) 113
BstMAI GTCTC 2 cut(s) 32, 258
BstMBI GATC 1 cut(s) 110
BstSFI CTRYAG 1 cut(s) 15
BstUI CGCG 1 cut(s) 297
BstV1I GCAGC 1 cut(s) 49
BsuRI GGCC 1 cut(s) 201
BtrI CACGTC 1 cut(s) 184
BtsCI GGATG 2 cut(s) 10, 177
Cac8I GCNNGC 1 cut(s) 288
CfoI GCGC 1 cut(s) 253
CseI GACGC 3 cut(s) 10, 286, 303
Csp6I GTAC 2 cut(s) 96, 309
CviJI RGCY 4 cut(s) 62, 82, 201, 331
CviKI_1 RGCY 4 cut(s) 62, 82, 201, 331
CviQI GTAC 2 cut(s) 96, 309
DdeI CTNAG 1 cut(s) 122
DpnI GATC 1 cut(s) 112
DpnII GATC 1 cut(s) 110
DrdI GACNNNNNNGTC 1 cut(s) 300
DseDI GACNNNNNNGTC 1 cut(s) 300
Eco130I CCWWGG 1 cut(s) 207
Eco147I AGGCCT 1 cut(s) 201
Eco31I GGTCTC 1 cut(s) 258
Eco57I CTGAAG 1 cut(s) 122
EcoT14I CCWWGG 1 cut(s) 207
ErhI CCWWGG 1 cut(s) 207
FaiI YATR 5 cut(s) 52, 132, 174, 278, 354
Fnu4HI GCNGC 1 cut(s) 63
FokI GGATG 2 cut(s) 17, 164
Fsp4HI GCNGC 1 cut(s) 63
FspBI CTAG 2 cut(s) 167, 197
FspI TGCGCA 1 cut(s) 252
GlaI GCGC 1 cut(s) 252
GluI GCNGC 1 cut(s) 63
HaeIII GGCC 1 cut(s) 201
HgaI GACGC 3 cut(s) 10, 286, 303
HhaI GCGC 1 cut(s) 253
Hin1I GRCGYC 1 cut(s) 21
Hin6I GCGC 1 cut(s) 251
HinP1I GCGC 1 cut(s) 251
HinfI GANTC 2 cut(s) 334, 342
HphI GGTGA 1 cut(s) 101
Hpy188I TCNGA 3 cut(s) 151, 228, 306
Hpy188III TCNNGA 2 cut(s) 108, 124
HpyCH4III ACNGT 1 cut(s) 100
HpyCH4IV ACGT 1 cut(s) 183
HpyCH4V TGCA 3 cut(s) 44, 164, 290
HpyF3I CTNAG 1 cut(s) 122
HpySE526I ACGT 1 cut(s) 183
Hsp92I GRCGYC 1 cut(s) 21
HspAI GCGC 1 cut(s) 251
Kzo9I GATC 1 cut(s) 110
LpnPI CCDG 5 cut(s) 3, 93, 109, 269, 296
Lsp1109I GCAGC 1 cut(s) 49
MaeI CTAG 2 cut(s) 167, 197
MaeII ACGT 1 cut(s) 183
MalI GATC 1 cut(s) 112
MboI GATC 1 cut(s) 110
MluCI AATT 1 cut(s) 39
MluI ACGCGT 1 cut(s) 295
MnlI CCTC 2 cut(s) 212, 214
Mva1269I GAATGC 1 cut(s) 10
MvnI CGCG 1 cut(s) 297
NdeII GATC 1 cut(s) 110
NsbI TGCGCA 1 cut(s) 252
PceI AGGCCT 1 cut(s) 201
PctI GAATGC 1 cut(s) 10
PfeI GAWTC 2 cut(s) 334, 342
PflFI GACNNNGTC 1 cut(s) 173
PkrI GCNGC 1 cut(s) 64
PsrI GAACNNNNNNTAC 2 cut(s) 88, 120
PsyI GACNNNGTC 1 cut(s) 173
RsaI GTAC 2 cut(s) 97, 310
RsaNI GTAC 2 cut(s) 96, 309
SatI GCNGC 1 cut(s) 63
Sau3AI GATC 1 cut(s) 110
ScaI AGTACT 1 cut(s) 310
SetI ASST 5 cut(s) 64, 186, 225, 270, 333
SfcI CTRYAG 1 cut(s) 15
Sse9I AATT 1 cut(s) 39
SseBI AGGCCT 1 cut(s) 201
SspMI CTAG 2 cut(s) 167, 197
StuI AGGCCT 1 cut(s) 201
StyI CCWWGG 1 cut(s) 207
TaaI ACNGT 1 cut(s) 100
TaiI ACGT 1 cut(s) 186
TasI AATT 1 cut(s) 39
TatI WGTACW 1 cut(s) 308
TfiI GAWTC 2 cut(s) 334, 342
TseI GCWGC 1 cut(s) 62
Tth111I GACNNNGTC 1 cut(s) 173
XspI CTAG 2 cut(s) 167, 197
ZrmI AGTACT 1 cut(s) 310
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.