RNA splicing
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G08540 |
| fragaria_vesca | FvH4_4g37340 |
| malus_domestica | MD13G1000800.v1.1 MD16G1004900.v1.1 |
| prunus_persica | Prupe.1G351900_v2.0.a1 |
| pyrus_communis | pycom13g00070 |
| rosa_chinensis | RchiOBHm_Chr1g0316621 RchiOBHm_Chr3g0483721 RchiOBHm_Chr3g0483731 RchiOBHm_Chr4g0403031 RchiOBHm_Chr4g0447201 RchiOBHm_Chr6g0263291 |
| rosa_laevigata | RLG00000005597 |
| rosa_multiflora | Rmu_co8235609.1_g000001 Rmu_sc0000101.1_g000002 Rmu_sc0000310.1_g000018 Rmu_sc0001241.1_g000043 Rmu_ssc0000359.1_g000022 |
| rosa_roxburghii | Rroxscaffold_5G00387570 |
| rosa_rugosa | Rorug04G0379000 |
| rosa_samantha | Rh1AG022300 Rh2BG461100 Rh2CG299400 Rh3AG256400 Rh4AG023400 Rh4AG023500 Rh4AG440200 Rh4BG449200 Rh4CG466200 Rh4DG447700 Rh5CG543000 Rh6AG123500 Rh6BG118500 Rh6CG116600 Rh6DG105200 |
| rosa_wichuraiana | Rw1G002360 Rw4G001660 Rw4G037660 Rw6G025410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 17 |
| Acc36I | ACCTGC | 1 cut(s) | 96 |
| AfaI | GTAC | 2 cut(s) | 23, 34 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 172 |
| AgsI | TTSAA | 2 cut(s) | 40, 55 |
| AjiI | CACGTC | 1 cut(s) | 148 |
| Alw26I | GTCTC | 1 cut(s) | 70 |
| AoxI | GGCC | 2 cut(s) | 83, 163 |
| AspLEI | GCGC | 1 cut(s) | 18 |
| AspS9I | GGNCC | 1 cut(s) | 84 |
| BcoDI | GTCTC | 1 cut(s) | 70 |
| BfaI | CTAG | 2 cut(s) | 131, 161 |
| BfmI | CTRYAG | 1 cut(s) | 151 |
| BfuAI | ACCTGC | 1 cut(s) | 96 |
| BmgBI | CACGTC | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 1 cut(s) | 84 |
| BmrI | ACTGGG | 1 cut(s) | 81 |
| BmuI | ACTGGG | 1 cut(s) | 81 |
| BsaJI | CCNNGG | 1 cut(s) | 171 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 172 |
| Bse1I | ACTGG | 1 cut(s) | 87 |
| BseDI | CCNNGG | 1 cut(s) | 171 |
| BseGI | GGATG | 2 cut(s) | 24, 141 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BseNI | ACTGG | 1 cut(s) | 87 |
| BseRI | GAGGAG | 1 cut(s) | 20 |
| BsgI | GTGCAG | 1 cut(s) | 111 |
| BshFI | GGCC | 2 cut(s) | 85, 165 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 172 |
| BsmAI | GTCTC | 1 cut(s) | 70 |
| BsnI | GGCC | 2 cut(s) | 85, 165 |
| BspANI | GGCC | 2 cut(s) | 85, 165 |
| BspMI | ACCTGC | 1 cut(s) | 96 |
| BsrI | ACTGG | 1 cut(s) | 87 |
| BssECI | CCNNGG | 1 cut(s) | 171 |
| BssT1I | CCWWGG | 1 cut(s) | 171 |
| BstF5I | GGATG | 2 cut(s) | 24, 141 |
| BstHHI | GCGC | 1 cut(s) | 18 |
| BstMAI | GTCTC | 1 cut(s) | 70 |
| BstSFI | CTRYAG | 1 cut(s) | 151 |
| BsuRI | GGCC | 2 cut(s) | 85, 165 |
| BtrI | CACGTC | 1 cut(s) | 148 |
| BtsCI | GGATG | 2 cut(s) | 24, 141 |
| BtsIMutI | CAGTG | 1 cut(s) | 223 |
| BveI | ACCTGC | 1 cut(s) | 96 |
| CfoI | GCGC | 1 cut(s) | 18 |
| Cfr13I | GGNCC | 1 cut(s) | 84 |
| Csp6I | GTAC | 2 cut(s) | 22, 33 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 4 cut(s) | 49, 85, 165, 203 |
| CviKI_1 | RGCY | 4 cut(s) | 49, 85, 165, 203 |
| CviQI | GTAC | 2 cut(s) | 22, 33 |
| Eco130I | CCWWGG | 1 cut(s) | 171 |
| Eco147I | AGGCCT | 1 cut(s) | 165 |
| EcoT14I | CCWWGG | 1 cut(s) | 171 |
| EcoT22I | ATGCAT | 1 cut(s) | 192 |
| ErhI | CCWWGG | 1 cut(s) | 171 |
| FaeI | CATG | 1 cut(s) | 67 |
| FaiI | YATR | 6 cut(s) | 65, 102, 138, 188, 192, 194 |
| FatI | CATG | 1 cut(s) | 63 |
| FokI | GGATG | 2 cut(s) | 11, 128 |
| FspBI | CTAG | 2 cut(s) | 131, 161 |
| FspI | TGCGCA | 1 cut(s) | 17 |
| GlaI | GCGC | 1 cut(s) | 17 |
| HaeIII | GGCC | 2 cut(s) | 85, 165 |
| HhaI | GCGC | 1 cut(s) | 18 |
| Hin1II | CATG | 1 cut(s) | 67 |
| Hin6I | GCGC | 1 cut(s) | 16 |
| HinP1I | GCGC | 1 cut(s) | 16 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| HpyCH4IV | ACGT | 1 cut(s) | 147 |
| HpyCH4V | TGCA | 2 cut(s) | 128, 190 |
| HpySE526I | ACGT | 1 cut(s) | 147 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| HspAI | GCGC | 1 cut(s) | 16 |
| LpnPI | CCDG | 3 cut(s) | 72, 91, 100 |
| MaeI | CTAG | 2 cut(s) | 131, 161 |
| MaeII | ACGT | 1 cut(s) | 147 |
| MluCI | AATT | 1 cut(s) | 67 |
| MnlI | CCTC | 1 cut(s) | 176 |
| Mph1103I | ATGCAT | 1 cut(s) | 192 |
| NlaIII | CATG | 1 cut(s) | 67 |
| NsbI | TGCGCA | 1 cut(s) | 17 |
| NsiI | ATGCAT | 1 cut(s) | 192 |
| PceI | AGGCCT | 1 cut(s) | 165 |
| PflFI | GACNNNGTC | 1 cut(s) | 137 |
| PspPI | GGNCC | 1 cut(s) | 84 |
| PsyI | GACNNNGTC | 1 cut(s) | 137 |
| RsaI | GTAC | 2 cut(s) | 23, 34 |
| RsaNI | GTAC | 2 cut(s) | 22, 33 |
| Sau96I | GGNCC | 1 cut(s) | 84 |
| SetI | ASST | 2 cut(s) | 110, 150 |
| SfcI | CTRYAG | 1 cut(s) | 151 |
| Sse9I | AATT | 1 cut(s) | 67 |
| SseBI | AGGCCT | 1 cut(s) | 165 |
| SspMI | CTAG | 2 cut(s) | 131, 161 |
| StuI | AGGCCT | 1 cut(s) | 165 |
| StyI | CCWWGG | 1 cut(s) | 171 |
| TaiI | ACGT | 1 cut(s) | 150 |
| TasI | AATT | 1 cut(s) | 67 |
| TatI | WGTACW | 2 cut(s) | 21, 32 |
| TscAI | CASTG | 1 cut(s) | 223 |
| TspDTI | ATGAA | 2 cut(s) | 57, 80 |
| TspGWI | ACGGA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 223 |
| Tth111I | GACNNNGTC | 1 cut(s) | 137 |
| XspI | CTAG | 2 cut(s) | 131, 161 |
| Zsp2I | ATGCAT | 1 cut(s) | 192 |