Rh2DG126500

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
10583972 .. 10584127
156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG126500.1

Sequence Viewer

Length: 156 bp
ATGGCCTCTAGCCCCGACGCCGACGTCGATGAGCTGGACGAGTTGGAGTGCCAAGTCACCGAAATGGCGGTGAAGATTCAAGAGTACCGAGCCACTGTACCGGAGCAGCTCAAGAACACGCTACCTTCCATTATCGAAGCTCAGAGACCCGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

51

Amino Acids

5.7

Weight (kDa)

4.09

Isoelectric Point (pI)

58.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 23
AatII GACGTC 1 cut(s) 27
AciI CCGC 1 cut(s) 68
AcyI GRCGYC 2 cut(s) 18, 24
AfaI GTAC 2 cut(s) 86, 99
AgsI TTSAA 1 cut(s) 80
AluBI AGCT 3 cut(s) 34, 109, 140
AluI AGCT 3 cut(s) 34, 109, 140
Alw26I GTCTC 1 cut(s) 139
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 1 cut(s) 106
AsuHPI GGTGA 2 cut(s) 49, 82
BbvI GCAGC 1 cut(s) 118
BcoDI GTCTC 1 cut(s) 139
BfaI CTAG 1 cut(s) 9
BisI GCNGC 1 cut(s) 107
BlsI GCNGC 1 cut(s) 108
BpuEI CTTGAG 1 cut(s) 95
BsaHI GRCGYC 2 cut(s) 18, 24
BsaI GGTCTC 1 cut(s) 139
BsaWI WCCGGW 1 cut(s) 100
BseMII CTCAG 1 cut(s) 155
BseXI GCAGC 1 cut(s) 118
BshFI GGCC 1 cut(s) 5
BsiSI CCGG 1 cut(s) 101
BsmAI GTCTC 1 cut(s) 139
BsnI GGCC 1 cut(s) 5
Bso31I GGTCTC 1 cut(s) 139
BspACI CCGC 1 cut(s) 68
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 1 cut(s) 154
BspTNI GGTCTC 1 cut(s) 139
BssNI GRCGYC 2 cut(s) 18, 24
Bst4CI ACNGT 1 cut(s) 97
BstACI GRCGYC 2 cut(s) 18, 24
BstDEI CTNAG 1 cut(s) 141
BstMAI GTCTC 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 118
BsuRI GGCC 1 cut(s) 5
BtsIMutI CAGTG 1 cut(s) 93
CseI GACGC 1 cut(s) 26
Csp6I GTAC 2 cut(s) 85, 98
CviJI RGCY 6 cut(s) 5, 12, 34, 92, 109, 140
CviKI_1 RGCY 6 cut(s) 5, 12, 34, 92, 109, 140
CviQI GTAC 2 cut(s) 85, 98
DdeI CTNAG 1 cut(s) 141
DrdI GACNNNNNNGTC 1 cut(s) 23
DseDI GACNNNNNNGTC 1 cut(s) 23
Eco31I GGTCTC 1 cut(s) 139
Fnu4HI GCNGC 1 cut(s) 107
Fsp4HI GCNGC 1 cut(s) 107
FspBI CTAG 1 cut(s) 9
GluI GCNGC 1 cut(s) 107
HaeIII GGCC 1 cut(s) 5
HapII CCGG 1 cut(s) 101
HgaI GACGC 1 cut(s) 26
Hin1I GRCGYC 2 cut(s) 18, 24
HinfI GANTC 1 cut(s) 76
HpaII CCGG 1 cut(s) 101
HphI GGTGA 2 cut(s) 49, 82
Hpy188I TCNGA 1 cut(s) 144
Hpy188III TCNNGA 2 cut(s) 80, 112
Hpy99I CGWCG 3 cut(s) 20, 26, 29
HpyAV CCTTC 1 cut(s) 135
HpyCH4III ACNGT 1 cut(s) 97
HpyCH4IV ACGT 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 141
HpySE526I ACGT 1 cut(s) 24
Hsp92I GRCGYC 2 cut(s) 18, 24
LmnI GCTCC 1 cut(s) 103
LpnPI CCDG 2 cut(s) 20, 114
Lsp1109I GCAGC 1 cut(s) 118
MaeI CTAG 1 cut(s) 9
MaeII ACGT 1 cut(s) 24
MaeIII GTNAC 1 cut(s) 55
MboII GAAGA 1 cut(s) 85
MmeI TCCRAC 1 cut(s) 24
MnlI CCTC 1 cut(s) 16
MslI CAYNNNNRTG 1 cut(s) 62
MspI CCGG 1 cut(s) 101
NmuCI GTSAC 1 cut(s) 55
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PfeI GAWTC 1 cut(s) 76
PkrI GCNGC 1 cut(s) 108
RsaI GTAC 2 cut(s) 86, 99
RsaNI GTAC 2 cut(s) 85, 98
RseI CAYNNNNRTG 1 cut(s) 62
SatI GCNGC 1 cut(s) 107
SetI ASST 5 cut(s) 27, 36, 111, 127, 142
SmiMI CAYNNNNRTG 1 cut(s) 62
SmlI CTYRAG 1 cut(s) 110
SmoI CTYRAG 1 cut(s) 110
SsiI CCGC 1 cut(s) 68
SspMI CTAG 1 cut(s) 9
TaaI ACNGT 1 cut(s) 97
TaiI ACGT 1 cut(s) 27
TaqI TCGA 2 cut(s) 27, 135
TfiI GAWTC 1 cut(s) 76
TscAI CASTG 1 cut(s) 100
TseFI GTSAC 1 cut(s) 55
TseI GCWGC 1 cut(s) 106
Tsp45I GTSAC 1 cut(s) 55
TspRI CASTG 1 cut(s) 100
XspI CTAG 1 cut(s) 9
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.