Rh7BG256400

Salutaridine reductase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
23327343 .. 23327585
243 bp
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UTR
Exon/CDS
Intron
Rh7BG256400.1

Sequence Viewer

Length: 243 bp
ATGTCTTCTTACATTGTATCAAAAGCAGCTCTGAATGCTTATACAAGAGTCCTGGCCAAGAAGTATCCCAAAATTGCTACAAACGCAGTTAGTCCTGGTTTTACCAAAACAGACATCAACCAAAATACCGGGATTAACACAGTTGAAGAAGCTGCAGAAGGTCCTGTGAAGCTGGCTTTGATAGCTGACTCTGGTATTTCTGGCCTCTACTTTGAAATGACGGAAGAGTCATCCTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

80

Amino Acids

8.55

Weight (kDa)

4.96

Isoelectric Point (pI)

32.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 2 - 43 2.9e-06 short chain dehydrogenase
adh_short_C2 PF13561 3 - 50 2e-07 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 226
AcoI YGGCCR 1 cut(s) 54
AgsI TTSAA 2 cut(s) 146, 215
AjnI CCWGG 2 cut(s) 51, 94
AluBI AGCT 4 cut(s) 29, 152, 172, 185
AluI AGCT 4 cut(s) 29, 152, 172, 185
AoxI GGCC 2 cut(s) 54, 202
ApeKI GCWGC 2 cut(s) 26, 152
AspS9I GGNCC 1 cut(s) 161
AsuC2I CCSGG 1 cut(s) 130
AvaII GGWCC 1 cut(s) 161
BalI TGGCCA 1 cut(s) 56
BbvI GCAGC 2 cut(s) 38, 139
BciT130I CCWGG 2 cut(s) 53, 96
BciVI GTATCC 1 cut(s) 75
BcnI CCSGG 1 cut(s) 130
BfmI CTRYAG 1 cut(s) 153
BfuI GTATCC 1 cut(s) 75
BisI GCNGC 2 cut(s) 27, 153
BlsI GCNGC 2 cut(s) 28, 154
Bme1390I CCNGG 3 cut(s) 53, 96, 130
Bme18I GGWCC 1 cut(s) 161
BmgT120I GGNCC 1 cut(s) 161
BmrFI CCNGG 3 cut(s) 53, 96, 130
BpuMI CCSGG 1 cut(s) 130
BseBI CCWGG 2 cut(s) 53, 96
BseGI GGATG 1 cut(s) 230
BseXI GCAGC 2 cut(s) 38, 139
BshFI GGCC 2 cut(s) 56, 204
BsiSI CCGG 1 cut(s) 129
BsmI GAATGC 1 cut(s) 40
BsnI GGCC 2 cut(s) 56, 204
BspANI GGCC 2 cut(s) 56, 204
BspMAI CTGCAG 1 cut(s) 157
Bst2UI CCWGG 2 cut(s) 53, 96
Bst4CI ACNGT 1 cut(s) 142
Bst6I CTCTTC 1 cut(s) 219
BstC8I GCNNGC 1 cut(s) 174
BstF5I GGATG 1 cut(s) 230
BstMWI GCNNNNNNNGC 3 cut(s) 35, 83, 182
BstNI CCWGG 2 cut(s) 53, 96
BstSCI CCNGG 3 cut(s) 51, 94, 128
BstSFI CTRYAG 1 cut(s) 153
BstV1I GCAGC 2 cut(s) 38, 139
BsuI GTATCC 1 cut(s) 75
BsuRI GGCC 2 cut(s) 56, 204
BtsCI GGATG 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 174
Cfr13I GGNCC 1 cut(s) 161
CviJI RGCY 7 cut(s) 29, 56, 152, 172, 176, 185, 204
CviKI_1 RGCY 7 cut(s) 29, 56, 152, 172, 176, 185, 204
DrdI GACNNNNNNGTC 1 cut(s) 226
DseDI GACNNNNNNGTC 1 cut(s) 226
EaeI YGGCCR 1 cut(s) 54
Eam1104I CTCTTC 1 cut(s) 219
EarI CTCTTC 1 cut(s) 219
Eco47I GGWCC 1 cut(s) 161
EcoO109I RGGNCCY 1 cut(s) 161
EcoRII CCWGG 2 cut(s) 51, 94
FaiI YATR 1 cut(s) 42
Fnu4HI GCNGC 2 cut(s) 27, 153
FokI GGATG 1 cut(s) 217
Fsp4HI GCNGC 2 cut(s) 27, 153
GluI GCNGC 2 cut(s) 27, 153
HaeIII GGCC 2 cut(s) 56, 204
HapII CCGG 1 cut(s) 129
HinfI GANTC 3 cut(s) 48, 188, 227
HpaII CCGG 1 cut(s) 129
Hpy188I TCNGA 1 cut(s) 33
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 1 cut(s) 142
HpyCH4V TGCA 1 cut(s) 155
HpyF10VI GCNNNNNNNGC 3 cut(s) 35, 83, 182
LpnPI CCDG 9 cut(s) 38, 65, 81, 108, 142, 158, 177, 177, 186
Lsp1109I GCAGC 2 cut(s) 38, 139
MboII GAAGA 2 cut(s) 158, 236
MlsI TGGCCA 1 cut(s) 56
MluCI AATT 1 cut(s) 72
MluNI TGGCCA 1 cut(s) 56
MlyI GAGTC 3 cut(s) 57, 182, 236
MnlI CCTC 1 cut(s) 215
Mox20I TGGCCA 1 cut(s) 56
MscI TGGCCA 1 cut(s) 56
MseI TTAA 1 cut(s) 135
Msp20I TGGCCA 1 cut(s) 56
MspI CCGG 1 cut(s) 129
MspR9I CCNGG 3 cut(s) 53, 96, 130
Mva1269I GAATGC 1 cut(s) 40
MvaI CCWGG 2 cut(s) 53, 96
MwoI GCNNNNNNNGC 3 cut(s) 35, 83, 182
NciI CCSGG 1 cut(s) 130
PctI GAATGC 1 cut(s) 40
PkrI GCNGC 2 cut(s) 28, 154
PleI GAGTC 3 cut(s) 56, 182, 235
PpsI GAGTC 3 cut(s) 56, 182, 235
PpuMI RGGWCCY 1 cut(s) 161
Psp5II RGGWCCY 1 cut(s) 161
Psp6I CCWGG 2 cut(s) 51, 94
PspGI CCWGG 2 cut(s) 51, 94
PspPI GGNCC 1 cut(s) 161
PspPPI RGGWCCY 1 cut(s) 161
PstI CTGCAG 1 cut(s) 157
SaqAI TTAA 1 cut(s) 135
SatI GCNGC 2 cut(s) 27, 153
Sau96I GGNCC 1 cut(s) 161
SchI GAGTC 3 cut(s) 57, 182, 236
ScrFI CCNGG 3 cut(s) 53, 96, 130
SetI ASST 5 cut(s) 31, 154, 163, 174, 187
SfcI CTRYAG 1 cut(s) 153
SinI GGWCC 1 cut(s) 161
Sse9I AATT 1 cut(s) 72
StyD4I CCNGG 3 cut(s) 51, 94, 128
TaaI ACNGT 1 cut(s) 142
TasI AATT 1 cut(s) 72
Tru1I TTAA 1 cut(s) 135
Tru9I TTAA 1 cut(s) 135
TseI GCWGC 2 cut(s) 26, 152
TspGWI ACGGA 1 cut(s) 236
VpaK11BI GGWCC 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.