Rh7CG181300

Salutaridine reductase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0001077
Physical Location & Seq
Reverse (-)
15657618 .. 15701427
43810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG181300.1

Sequence Viewer

Length: 882 bp
ATGGCGGAAACTACCATCAATTTTGGGTCAAAGAAGATTGCAGTTGTTACTGGAGCCAACAAAGGGATTGGACTTGAGATTAGTAAGCAATTAGCTTCTAAAGGAGTTGGGGTGGTATTAACAGCAAGAGATGCGAAGAGAGGAACAGAAGCAGCTGAAAGCCTAAAGGCTTCTGGTTTCTCCGATGTGGTCTTCCATCAGCTAGATGTAACTGCCCCAACTAGCATTGCTTCTTTGGCAAACTTTCTCAAAACGCAATTCAGAAAGCTTGACATATTGGTTAACAATGCAGGAGTCCTTGGATCTGTATTCCTCGCAGACGACATAGTTGGGCCTGACAATGTTAAACAAAATACAGTGCAAACTTACGAGACAGCGGCGGATTGTTTGAAAACAAACTATTATGGAATCAAGCAACTCACAGAAGCACTTGTTCCACTACTTCAAAAATCTGAAGCTCCAAAGATAGTCAATGTCTCTTCCACACTGGGACAGCTAAGACTTATTTCAAATGAGAAAGCAAAGAAGGAGCTAGGAGATGTGGATAACCTCACCGAGGAGAAAGTGGACAAGCTAGTCGAGGAATTTCTAGAGGATGTGAAGCATGATTCGATAAAATCCAAAGGATGGCCTTTAGATATATCTGCCTACATTGTATCAAAAGCAGCTCTTAATGCTTATACAAGAGTCGTGGCAAAGAAGTATCCCCACATTGCTATAAACGCAGTTGGTCCAGGTTATACCAAAACAGATCTCAACAATAATACCGGGATTCTCACAGTTGAAGAAGCTGCACTAGGTCCTGTGAAGCTGGCTTTGATAGCCGAAACTGGAATTTCAGGCCGCTTCTTTAACCGGAATGAAGAGTCAACCTTTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00902 ko01110 map00902 map01110
Pfam Domains
Protein Families
adh_short adh_short_C2

Protein Analysis

293

Amino Acids

31.49

Weight (kDa)

6.36

Isoelectric Point (pI)

20.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 12 - 168 5e-29 short chain dehydrogenase
KR PF08659 15 - 106 1e-07 KR domain
adh_short_C2 PF13561 18 - 165 5e-19 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 575
AccB7I CCANNNNNTGG 1 cut(s) 627
AciI CCGC 4 cut(s) 5, 377, 380, 844
AclWI GGATC 1 cut(s) 310
AcsI RAATTY 2 cut(s) 584, 834
AcuI CTGAAG 1 cut(s) 474
AfiI CCNNNNNNNGG 3 cut(s) 63, 556, 627
AgsI TTSAA 4 cut(s) 391, 446, 510, 785
AjnI CCWGG 1 cut(s) 733
Alw26I GTCTC 2 cut(s) 365, 481
AlwI GGATC 1 cut(s) 310
AoxI GGCC 3 cut(s) 332, 629, 841
ApeKI GCWGC 3 cut(s) 152, 665, 791
ApoI RAATTY 2 cut(s) 584, 834
AspS9I GGNCC 3 cut(s) 332, 731, 800
AsuC2I CCSGG 1 cut(s) 769
AsuHPI GGTGA 1 cut(s) 544
AvaII GGWCC 2 cut(s) 731, 800
BbsI GAAGAC 1 cut(s) 184
BbvI GCAGC 3 cut(s) 164, 677, 778
BccI CCATC 3 cut(s) 23, 204, 621
BciT130I CCWGG 1 cut(s) 735
BciVI GTATCC 1 cut(s) 714
BcnI CCSGG 1 cut(s) 769
BcoDI GTCTC 2 cut(s) 365, 481
BfaI CTAG 6 cut(s) 203, 222, 533, 575, 590, 797
BfuI GTATCC 1 cut(s) 714
BglII AGATCT 1 cut(s) 751
BisI GCNGC 5 cut(s) 153, 378, 666, 792, 844
BlsI GCNGC 5 cut(s) 154, 379, 667, 793, 845
Bme1390I CCNGG 2 cut(s) 735, 769
Bme18I GGWCC 2 cut(s) 731, 800
BmgT120I GGNCC 3 cut(s) 332, 731, 800
BmiI GGNNCC 1 cut(s) 55
BmrFI CCNGG 2 cut(s) 735, 769
BmrI ACTGGG 1 cut(s) 497
BmsI GCATC 1 cut(s) 121
BmuI ACTGGG 1 cut(s) 497
BpiI GAAGAC 1 cut(s) 184
BpmI CTGGAG 1 cut(s) 72
BpuEI CTTGAG 1 cut(s) 95
BpuMI CCSGG 1 cut(s) 769
BsaJI CCNNGG 2 cut(s) 298, 555
BsaWI WCCGGW 1 cut(s) 855
BsaXI ACNNNNNCTCC 2 cut(s) 96, 126
Bsc4I CCNNNNNNNGG 3 cut(s) 63, 556, 627
Bse1I ACTGG 3 cut(s) 55, 492, 835
Bse3DI GCAATG 2 cut(s) 225, 711
BseBI CCWGG 1 cut(s) 735
BseDI CCNNGG 2 cut(s) 298, 555
BseGI GGATG 2 cut(s) 601, 632
BseLI CCNNNNNNNGG 3 cut(s) 63, 556, 627
BseMI GCAATG 2 cut(s) 225, 711
BseNI ACTGG 3 cut(s) 55, 492, 835
BseRI GAGGAG 1 cut(s) 572
BseXI GCAGC 3 cut(s) 164, 677, 778
BsgI GTGCAG 1 cut(s) 777
BshFI GGCC 3 cut(s) 334, 631, 843
BsiSI CCGG 2 cut(s) 768, 856
BslFI GGGAC 1 cut(s) 504
BslI CCNNNNNNNGG 3 cut(s) 63, 556, 627
BsmAI GTCTC 2 cut(s) 365, 481
BsmFI GGGAC 1 cut(s) 504
BsnI GGCC 3 cut(s) 334, 631, 843
Bsp143I GATC 2 cut(s) 302, 751
BspACI CCGC 4 cut(s) 5, 377, 380, 844
BspANI GGCC 3 cut(s) 334, 631, 843
BspLI GGNNCC 1 cut(s) 55
BspPI GGATC 1 cut(s) 310
BsrDI GCAATG 2 cut(s) 225, 711
BsrI ACTGG 3 cut(s) 55, 492, 835
BssECI CCNNGG 2 cut(s) 298, 555
BssMI GATC 2 cut(s) 302, 751
BssT1I CCWWGG 1 cut(s) 298
Bst2UI CCWGG 1 cut(s) 735
Bst4CI ACNGT 2 cut(s) 358, 781
Bst6I CTCTTC 3 cut(s) 131, 484, 858
BstAPI GCANNNNNTGC 1 cut(s) 131
BstC8I GCNNGC 1 cut(s) 813
BstDEI CTNAG 1 cut(s) 497
BstENI CCTNNNNNAGG 1 cut(s) 554
BstF5I GGATG 2 cut(s) 601, 632
BstKTI GATC 2 cut(s) 305, 754
BstMAI GTCTC 2 cut(s) 365, 481
BstMBI GATC 2 cut(s) 302, 751
BstMWI GCNNNNNNNGC 5 cut(s) 131, 236, 674, 722, 821
BstNI CCWGG 1 cut(s) 735
BstSCI CCNGG 2 cut(s) 733, 767
BstV1I GCAGC 3 cut(s) 164, 677, 778
BstV2I GAAGAC 1 cut(s) 184
BstX2I RGATCY 2 cut(s) 302, 751
BstYI RGATCY 2 cut(s) 302, 751
BsuI GTATCC 1 cut(s) 714
BsuRI GGCC 3 cut(s) 334, 631, 843
BtsCI GGATG 2 cut(s) 601, 632
BtsIMutI CAGTG 2 cut(s) 363, 485
Cac8I GCNNGC 1 cut(s) 813
Cfr13I GGNCC 3 cut(s) 332, 731, 800
CspCI CAANNNNNGTGG 2 cut(s) 672, 707
CviAII CATG 1 cut(s) 605
DdeI CTNAG 1 cut(s) 497
DpnI GATC 2 cut(s) 304, 753
DpnII GATC 2 cut(s) 302, 751
DrdI GACNNNNNNGTC 1 cut(s) 575
DseDI GACNNNNNNGTC 1 cut(s) 575
Eam1104I CTCTTC 3 cut(s) 131, 484, 858
EarI CTCTTC 3 cut(s) 131, 484, 858
EciI GGCGGA 2 cut(s) 20, 395
Eco130I CCWWGG 1 cut(s) 298
Eco47I GGWCC 2 cut(s) 731, 800
Eco57I CTGAAG 1 cut(s) 474
EcoNI CCTNNNNNAGG 1 cut(s) 554
EcoO109I RGGNCCY 1 cut(s) 800
EcoRII CCWGG 1 cut(s) 733
EcoT14I CCWWGG 1 cut(s) 298
ErhI CCWWGG 1 cut(s) 298
FaeI CATG 1 cut(s) 608
FaiI YATR 8 cut(s) 275, 326, 405, 606, 641, 681, 719, 741
FalI AAGNNNNNCTT 2 cut(s) 654, 686
FaqI GGGAC 1 cut(s) 504
FatI CATG 1 cut(s) 604
Fnu4HI GCNGC 5 cut(s) 153, 378, 666, 792, 844
FokI GGATG 2 cut(s) 608, 639
Fsp4HI GCNGC 5 cut(s) 153, 378, 666, 792, 844
FspBI CTAG 6 cut(s) 203, 222, 533, 575, 590, 797
GluI GCNGC 5 cut(s) 153, 378, 666, 792, 844
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 3 cut(s) 334, 631, 843
HapII CCGG 2 cut(s) 768, 856
Hin1II CATG 1 cut(s) 608
HincII GTYRAC 2 cut(s) 283, 870
HindII GTYRAC 2 cut(s) 283, 870
HindIII AAGCTT 1 cut(s) 266
HinfI GANTC 6 cut(s) 294, 408, 608, 687, 772, 866
HpaI GTTAAC 1 cut(s) 283
HpaII CCGG 2 cut(s) 768, 856
HphI GGTGA 1 cut(s) 544
Hpy166II GTNNAC 3 cut(s) 283, 568, 870
Hpy188I TCNGA 3 cut(s) 184, 263, 454
Hpy188III TCNNGA 1 cut(s) 590
Hpy8I GTNNAC 3 cut(s) 283, 568, 870
HpyAV CCTTC 1 cut(s) 520
HpyCH4III ACNGT 2 cut(s) 358, 781
HpyCH4V TGCA 4 cut(s) 41, 290, 361, 794
HpyF10VI GCNNNNNNNGC 5 cut(s) 131, 236, 674, 722, 821
HpyF3I CTNAG 1 cut(s) 497
Hsp92II CATG 1 cut(s) 608
KspAI GTTAAC 1 cut(s) 283
Kzo9I GATC 2 cut(s) 302, 751
LmnI GCTCC 3 cut(s) 53, 463, 529
Lsp1109I GCAGC 3 cut(s) 164, 677, 778
LweI GCATC 1 cut(s) 121
MaeI CTAG 6 cut(s) 203, 222, 533, 575, 590, 797
MaeIII GTNAC 2 cut(s) 46, 208
MalI GATC 2 cut(s) 304, 753
MboI GATC 2 cut(s) 302, 751
MboII GAAGA 6 cut(s) 46, 148, 184, 471, 797, 875
MflI RGATCY 2 cut(s) 302, 751
MluCI AATT 5 cut(s) 19, 89, 257, 584, 834
MlyI GAGTC 3 cut(s) 303, 696, 875
MnlI CCTC 6 cut(s) 134, 323, 550, 560, 574, 586
MseI TTAA 5 cut(s) 119, 282, 345, 672, 852
MspA1I CMGCKG 2 cut(s) 155, 377
MspI CCGG 2 cut(s) 768, 856
MspR9I CCNGG 2 cut(s) 735, 769
MvaI CCWGG 1 cut(s) 735
MwoI GCNNNNNNNGC 5 cut(s) 131, 236, 674, 722, 821
NciI CCSGG 1 cut(s) 769
NdeII GATC 2 cut(s) 302, 751
NlaIII CATG 1 cut(s) 608
NlaIV GGNNCC 1 cut(s) 55
PfeI GAWTC 3 cut(s) 408, 608, 772
PflMI CCANNNNNTGG 1 cut(s) 627
PkrI GCNGC 5 cut(s) 154, 379, 667, 793, 845
PleI GAGTC 3 cut(s) 302, 695, 874
PpsI GAGTC 3 cut(s) 302, 695, 874
PpuMI RGGWCCY 1 cut(s) 800
Psp5II RGGWCCY 1 cut(s) 800
Psp6I CCWGG 1 cut(s) 733
PspGI CCWGG 1 cut(s) 733
PspN4I GGNNCC 1 cut(s) 55
PspPI GGNCC 3 cut(s) 332, 731, 800
PspPPI RGGWCCY 1 cut(s) 800
PsuI RGATCY 2 cut(s) 302, 751
PvuII CAGCTG 1 cut(s) 155
SaqAI TTAA 5 cut(s) 119, 282, 345, 672, 852
SatI GCNGC 5 cut(s) 153, 378, 666, 792, 844
Sau3AI GATC 2 cut(s) 302, 751
Sau96I GGNCC 3 cut(s) 332, 731, 800
SchI GAGTC 3 cut(s) 303, 696, 875
ScrFI CCNGG 2 cut(s) 735, 769
SfaNI GCATC 1 cut(s) 121
SinI GGWCC 2 cut(s) 731, 800
SmlI CTYRAG 1 cut(s) 74
SmoI CTYRAG 1 cut(s) 74
Sse9I AATT 5 cut(s) 19, 89, 257, 584, 834
SsiI CCGC 4 cut(s) 5, 377, 380, 844
SspMI CTAG 6 cut(s) 203, 222, 533, 575, 590, 797
StyD4I CCNGG 2 cut(s) 733, 767
StyI CCWWGG 1 cut(s) 298
TaaI ACNGT 2 cut(s) 358, 781
TaqI TCGA 2 cut(s) 579, 611
TasI AATT 5 cut(s) 19, 89, 257, 584, 834
TauI GCSGC 2 cut(s) 380, 846
TfiI GAWTC 3 cut(s) 408, 608, 772
Tru1I TTAA 5 cut(s) 119, 282, 345, 672, 852
Tru9I TTAA 5 cut(s) 119, 282, 345, 672, 852
TscAI CASTG 2 cut(s) 363, 492
TseI GCWGC 3 cut(s) 152, 665, 791
TspDTI ATGAA 1 cut(s) 876
TspRI CASTG 2 cut(s) 363, 492
Van91I CCANNNNNTGG 1 cut(s) 627
VpaK11BI GGWCC 2 cut(s) 731, 800
XagI CCTNNNNNAGG 1 cut(s) 554
XapI RAATTY 2 cut(s) 584, 834
XbaI TCTAGA 1 cut(s) 589
XspI CTAG 6 cut(s) 203, 222, 533, 575, 590, 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.