Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000650

Physical Location & Seq

Genomic Coordinates Forward (+)

5977323 .. 5981521

Gene Structure 4199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G17420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2760 bp

ATGGCCTTAGCTAAAGAGTTAATGGGTTATCCTCTCATCACAGAAAGGTCATCACTTGTCTCGTCGGCGTCGCATTTCAAGAAGAGGACACAGTCAACACAGTTCTCGATCAACCCTTTTGACCGGAGACCAAGAAAAACCAAATCCGGCGTCGTTGCAGCCATCAGCGAGGATTTGGTCAAAACGCTGCGTTTTTCCACAACGACCGGAGACAGAAAGAGCGAAGAGGAGGAGAAAGCGGCGGTGAAGTTCAAGGTGAGAGCTGTGGTTACTGTGAGGAACAAGAACAAGGAGGATTTGAAAGAGACTCTTGTTAAGCATTTGGATGCTTTTGCTGATAAAATTGGTCGAAACATTGTCTTGGAGCTTATCAGCACCCAACTTGATCCAAAAACGAAGTTGCCGAAGAAAAGCAATGCAGCAGTTTTAAAGGATTGGTCAAAGAAATCGAAAACTAAGGCGGAGAGAGTTCACTATACGGCGGAGTTCACGGTGGATGCAGCGTTTGGCTCGCCGGGAGCAATCACCGTCATGAATAAACACCAAAAAGAGTTTTTCTTGGAGAGCATAACCATTGAAGGCTTCGCACTTGGTCCTGTTCACTTTCCATGCAATTCTTGGGTTCAGTCTCAAAAAGATCACCCTGATAAACGAATTTTCTTCACTAATCAGCCGTATTTGCCGAATGAGACACCAAGCGGATTAAGAGTATTGAGGGAGAAAGAGTTGAAGAATCTACGAGGAGATGGAAGTGGAGTGAGAAAATTATCAGACAGAATTTACGACTTTGATGTTTACAACGACCTTGGAAATCCCGACAAATCATCCGAGCTCTCTCGCCCCAAACTCGGTGGCAAAGAGGTTCCTTACCCTAGACGTTGTCGTACTGGTCGCCAATCAACAGTTTCTGATAAAGACGCGGAGAGCCGAGTAGAGAAGCCATTACCTATGTATGTGCCACGAGACGAGCAATTTGAAGAGTCGAAGCAGGACACTTTTGCTGCAGGGAGGCTAAAAGCAGTCTTACACCACCTAATTCCGTCGCTCAAAGCCAGTATTGTAGCTGAGGACTTTGCAGACTTCGGCGAGATCGATCGTCTTTATAAAGAAGGCTTGTTACTCAAGTTAGGGTTTCAAGATGACATCTTTAAGAAGTTTCCTCTCCCTAAGGTCGTAGTTGATACCCTCCAAGAATCTACTAAAGGACTCCTCAAATACGACACTCCCAAAATATTATCGAAGGATAAAAACGCATGGTTAAGAGATGACGAATTCGCACGTCAAGCCATAGCTGGAATCAATCCAGTGAACATTGAGAGAGTCAAGACTTTTCCACCGGTCAGCAATCTTGACCCCAAGATCTACGGTCCACAACACTCCGCTCTTACTGACGACCATATCATTGGTCACCTCGACGGATTCTCCGTACAACAAGCGTTGGAAGAGAATAGATTGTATATGTTGGATTACCATGACATATTCTTACCGTTCCTAGACCGGATTAATGCGCTAGACGGACGCAAAGCCTATGCTACTCGAACTATCTTCTTCTTGACTCGTCTAGGCACACTTAAGCCGGTAGCCATTGAGCTAAGCCTCCCTCCCCATGGTCCAAAACATCGGTCCAAGCGTGTGCTTACACCTCCAGTCGATGCAACCTCTAATTGGATGTGGCAGCTCGCTAAAGCCCACGTTAGTTCTAACGATGCTGGTGTCCATCAGCTTGTCAATCACTGGTTACGGACACATGCATGCTTGGAGCCATTTATATTAGCTGCACACAGGCAATTGAGCGCTATGCATCCCATATTCAAGCTACTGGATCCACACATGAGATACACGTTGGAAATCAATGCTTTGGCTAGACAATCGTTGATCAGTGCAGATGGTGTGATCGAAGGAGGCTTCACTGCTGGTGCATACGGCATGGAAATGAGTGCCGCCGCATACAAAAGCAGCTGGCGGTTCGACATGGAAGGCCTCCCTGCCGATCTAATTCGCAGAGGAATGGCAATTCCTGATGCAACACAACCACATGGTCTTAAACTCCTAATCGAAGACTATCCGTACGCCAACGACGGTCTTTTACTCTGGTCAGCAATCCAAACCTGGGTCCGAACCTATGTTGAACGCTACTATCCAAACCCGAACCTTATCAAAACAGACTCTGAGCTCCAATCTTGGTACTCAGAATCAATCAACGTCGGCCACGCTGACCTCCGCGACGCTGATTGGTGGCCGGAGTTATCAACCGTCGACGACCTCGTGTCGATTCTAACCACTCTAATCTGGCTCGCCTCTGCTCAACACGCCGCTCTAAACTTTGGACAATACCCTTACGGTGGCTACGTCCCAAACCGACCACCGTTGATGCGGCGGTTAATCCCCGACGAGTCGGATCCAGAGTACGCGAGTTTCATCTCCCATCCGGAGAAGTATTACTTCTCGTCGATGCCAAGTTTGGCGCAGACTTCGAAGTTTATGGCCGTGGTTGATACTTTGTCGACGCATTCGCCGGATGAGGAGTATATTGGAGAGAGACAACAGCCGTCGATTTGGACAGGAGATGCGGAGATTGTTGAAGCGTTTTATGGATTTGCGGCAGAGATCGGACGGATAGAGAAAGAGATTGAGAAAAGGAACGCTGATCCTGACCGTAGAAATAGGTGTGGGGCTGGTGTTTTGCCTTATGAGTTGTTGGTTCCGAGTTCTGAGCCTGGTGTTACGTGTAGAGGTGTACCTAATAGTGTATCTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009555 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010193 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0022414 GO:0030258 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0034440 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051213 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0080086 GO:0090567 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

919

Amino Acids

103.72

Weight (kDa)

7.69

Isoelectric Point (pI)

44.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	136 - 221	9.3e-16	PLAT/LH2 domain
Lipoxygenase	PF00305	234 - 902	0.0	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17420 AT1G72520
fragaria_vesca	FvH4_4g01390 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970
malus_domestica	MD05G1339200.v1.1 MD05G1339300.v1.1 MD05G1339400.v1.1 MD09G1180900.v1.1 MD10G1294000.v1.1 MD17G1167100.v1.1
prunus_persica	Prupe.3G039200_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1
pyrus_communis	pycom09g09820 pycom09g09830 pycom10g24590 pycom17g15900
rosa_chinensis	RchiOBHm_Chr2g0145961 RchiOBHm_Chr3g0472481 RchiOBHm_Chr5g0008481 RchiOBHm_Chr5g0008501 RchiOBHm_Chr5g0008511
rosa_laevigata	RLG00000020179 RLG00000024076 RLG00000031573 RLG00000031574 RLG00000031576
rosa_multiflora	Rmu_sc0001665.1_g000013 Rmu_sc0001702.1_g000033 Rmu_sc0002145.1_g000002 Rmu_sc0034682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434820 Rroxscaffold_2G00100350
rosa_rugosa	Rorug02G0393500 Rorug03G0125900 Rorug04G0435900.1 Rorug04G0436000 Rorug04G0436400 Rorug04G0436400 Rorug04G0436500
rosa_samantha	Rh2BG460800 Rh2DG470100 Rh3AG177700 Rh3BG203600 Rh3CG194000 Rh3CG201100 Rh3DG171500 Rh5AG064800 Rh5AG064900 Rh5AG065200 Rh5BG061900 Rh5BG062100 Rh5BG062300 Rh5BG062400 Rh5BG062500 Rh5CG072000 Rh5CG072200 Rh5CG072300 Rh5CG072400 Rh5CG072600 Rh5CG072800 Rh5DG063500 Rh5DG063700 Rh5DG063900
rosa_wichuraiana	Rw2G036640 Rw3G016380 Rw5G005580 Rw5G005590 Rw5G005600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1104
AccBSI	CCGCTC	2 cut(s)	1382, 2315
AccI	GTMKAC	2 cut(s)	2256, 2504
AccII	CGCG	3 cut(s)	920, 2223, 2411
AccIII	TCCGGA	1 cut(s)	2428
AclWI	GGATC	6 cut(s)	380, 1817, 1830, 2393, 2406, 2642
AcoI	YGGCCR	3 cut(s)	2206, 2237, 2484
AcsI	RAATTY	3 cut(s)	654, 777, 1271
AcyI	GRCGYC	2 cut(s)	68, 150
AfaI	GTAC	6 cut(s)	886, 1428, 2069, 2186, 2408, 2739
AfeI	AGCGCT	1 cut(s)	1795
AfiI	CCNNNNNNNGG	5 cut(s)	848, 1607, 1665, 2110, 2342
AflII	CTTAAG	1 cut(s)	1571
AflIII	ACRYGT	2 cut(s)	1839, 2726
AgeI	ACCGGT	1 cut(s)	1336
AhdI	GACNNNNNGTC	1 cut(s)	2266
AjiI	CACGTC	1 cut(s)	1280
AjnI	CCWGG	2 cut(s)	2108, 2716
Alw21I	GWGCWC	2 cut(s)	834, 2175
Alw26I	GTCTC	8 cut(s)	64, 121, 204, 299, 633, 683, 957, 2533
AlwI	GGATC	6 cut(s)	380, 1817, 1830, 2393, 2406, 2642
AlwNI	CAGNNNCTG	2 cut(s)	908, 2168
Aor13HI	TCCGGA	1 cut(s)	2428
Aor51HI	AGCGCT	1 cut(s)	1795
AoxI	GGCC	5 cut(s)	3, 1978, 2206, 2237, 2484
ApeKI	GCWGC	8 cut(s)	158, 187, 419, 500, 1001, 1675, 1775, 1956
ApoI	RAATTY	3 cut(s)	654, 777, 1271
ArsI	GACNNNNNNTTYG	6 cut(s)	135, 167, 956, 988, 1607, 1639
AseI	ATTAAT	1 cut(s)	1503
AsiGI	ACCGGT	1 cut(s)	1336
AspLEI	GCGC	3 cut(s)	1510, 1796, 2467
AspS9I	GGNCC	5 cut(s)	593, 1367, 1610, 1623, 2113
AsuC2I	CCSGG	1 cut(s)	516
AsuHPI	GGTGA	5 cut(s)	256, 268, 517, 632, 1400
AsuII	TTCGAA	1 cut(s)	2474
AvaII	GGWCC	5 cut(s)	593, 1367, 1610, 1623, 2113
AxyI	CCTNAGG	1 cut(s)	1167
BamHI	GGATCC	2 cut(s)	1822, 2398
BanII	GRGCYC	2 cut(s)	834, 2175
BarI	GAAGNNNNNNTAC	2 cut(s)	1101, 1133
BauI	CACGAG	2 cut(s)	960, 2264
BbsI	GAAGAC	1 cut(s)	2064
Bbv12I	GWGCWC	2 cut(s)	834, 2175
BbvCI	CCTCAGC	1 cut(s)	1065
BbvI	GCAGC	8 cut(s)	170, 174, 431, 512, 988, 1687, 1762, 1968
BccI	CCATC	5 cut(s)	170, 740, 1725, 1880, 2433
BceAI	ACGGC	5 cut(s)	495, 658, 1939, 2471, 2533
BciT130I	CCWGG	2 cut(s)	2110, 2718
BclI	TGATCA	1 cut(s)	1875
BcnI	CCSGG	1 cut(s)	516
BcoDI	GTCTC	8 cut(s)	64, 121, 204, 299, 633, 683, 957, 2533
BfaI	CTAG	5 cut(s)	873, 1493, 1511, 1562, 1863
BfmI	CTRYAG	1 cut(s)	1002
BfoI	RGCGCY	1 cut(s)	1797
BfrI	CTTAAG	1 cut(s)	1571
BglII	AGATCT	1 cut(s)	1359
BlpI	GCTNAGC	1 cut(s)	1592
Bme1390I	CCNGG	3 cut(s)	516, 2110, 2718
Bme18I	GGWCC	5 cut(s)	593, 1367, 1610, 1623, 2113
BmeRI	GACNNNNNGTC	1 cut(s)	2266
BmgBI	CACGTC	1 cut(s)	1280
BmgT120I	GGNCC	5 cut(s)	593, 1367, 1610, 1623, 2113
BmiI	GGNNCC	6 cut(s)	864, 1761, 1824, 2114, 2400, 2703
BmrFI	CCNGG	3 cut(s)	516, 2110, 2718
BmsI	GCATC	9 cut(s)	316, 487, 1642, 1696, 1810, 2011, 2361, 2442, 2557
BpiI	GAAGAC	1 cut(s)	2064
BpmI	CTGGAG	1 cut(s)	1629
Bpu10I	CCTNAGC	2 cut(s)	7, 1065
Bpu1102I	GCTNAGC	1 cut(s)	1592
Bpu14I	TTCGAA	1 cut(s)	2474
BpuEI	CTTGAG	1 cut(s)	1106
BpuMI	CCSGG	1 cut(s)	516
Bsa29I	ATCGAT	1 cut(s)	1092
BsaAI	YACGTR	1 cut(s)	2727
BsaHI	GRCGYC	2 cut(s)	68, 150
BsaI	GGTCTC	1 cut(s)	121
BsaJI	CCNNGG	4 cut(s)	805, 1606, 2109, 2487
BsaWI	WCCGGW	5 cut(s)	123, 206, 1336, 1497, 2428
BsaXI	ACNNNNNCTCC	4 cut(s)	710, 740, 1406, 1436
Bsc4I	CCNNNNNNNGG	5 cut(s)	848, 1607, 1665, 2110, 2342
Bse118I	RCCGGY	2 cut(s)	1336, 1576
Bse1I	ACTGG	6 cut(s)	892, 1053, 1304, 1646, 1739, 1824
Bse21I	CCTNAGG	1 cut(s)	1167
Bse3DI	GCAATG	1 cut(s)	421
BseAI	TCCGGA	1 cut(s)	2428
BseBI	CCWGG	2 cut(s)	2110, 2718
BseCI	ATCGAT	1 cut(s)	1092
BseDI	CCNNGG	4 cut(s)	805, 1606, 2109, 2487
BseGI	GGATG	7 cut(s)	331, 502, 824, 1674, 1801, 2425, 2524
BseLI	CCNNNNNNNGG	5 cut(s)	848, 1607, 1665, 2110, 2342
BseMI	GCAATG	1 cut(s)	421
BseMII	CTCAG	4 cut(s)	1056, 2160, 2202, 2703
BseNI	ACTGG	6 cut(s)	892, 1053, 1304, 1646, 1739, 1824
BseRI	GAGGAG	5 cut(s)	242, 245, 756, 1199, 2537
BseXI	GCAGC	8 cut(s)	170, 174, 431, 512, 988, 1687, 1762, 1968
BsgI	GTGCAG	2 cut(s)	1761, 1902
Bsh1236I	CGCG	3 cut(s)	920, 2223, 2411
Bsh1285I	CGRYCG	2 cut(s)	207, 1096
BshFI	GGCC	5 cut(s)	5, 1980, 2208, 2239, 2486
BshTI	ACCGGT	1 cut(s)	1336
BshVI	ATCGAT	1 cut(s)	1092
BsiEI	CGRYCG	2 cut(s)	207, 1096
BsiHKAI	GWGCWC	2 cut(s)	834, 2175
BsiWI	CGTACG	1 cut(s)	2067
BslFI	GGGAC	1 cut(s)	2336
BslI	CCNNNNNNNGG	5 cut(s)	848, 1607, 1665, 2110, 2342
BsmAI	GTCTC	8 cut(s)	64, 121, 204, 299, 633, 683, 957, 2533
BsmBI	CGTCTC	1 cut(s)	957
BsmFI	GGGAC	1 cut(s)	2336
BsmI	GAATGC	1 cut(s)	2509
BsnI	GGCC	5 cut(s)	5, 1980, 2208, 2239, 2486
Bso31I	GGTCTC	1 cut(s)	121
Bsp119I	TTCGAA	1 cut(s)	2474
Bsp1286I	GDGCHC	2 cut(s)	834, 2175
Bsp13I	TCCGGA	1 cut(s)	2428
Bsp1720I	GCTNAGC	1 cut(s)	1592
Bsp19I	CCATGG	1 cut(s)	1606
BspANI	GGCC	5 cut(s)	5, 1980, 2208, 2239, 2486
BspCNI	CTCAG	4 cut(s)	1057, 2161, 2201, 2704
BspDI	ATCGAT	1 cut(s)	1092
BspEI	TCCGGA	1 cut(s)	2428
BspFNI	CGCG	3 cut(s)	920, 2223, 2411
BspHI	TCATGA	1 cut(s)	531
BspLI	GGNNCC	6 cut(s)	864, 1761, 1824, 2114, 2400, 2703
BspMAI	CTGCAG	1 cut(s)	1006
BspPI	GGATC	6 cut(s)	380, 1817, 1830, 2393, 2406, 2642
BspT104I	TTCGAA	1 cut(s)	2474
BspTI	CTTAAG	1 cut(s)	1571
BspTNI	GGTCTC	1 cut(s)	121
BsrBI	CCGCTC	2 cut(s)	1382, 2315
BsrDI	GCAATG	1 cut(s)	421
BsrFI	RCCGGY	2 cut(s)	1336, 1576
BsrI	ACTGG	6 cut(s)	892, 1053, 1304, 1646, 1739, 1824
BssAI	RCCGGY	2 cut(s)	1336, 1576
BssECI	CCNNGG	4 cut(s)	805, 1606, 2109, 2487
BssNI	GRCGYC	2 cut(s)	68, 150
BssSI	CACGAG	2 cut(s)	960, 2264
BssT1I	CCWWGG	2 cut(s)	805, 1606
Bst2BI	CACGAG	2 cut(s)	960, 2264
Bst2UI	CCWGG	2 cut(s)	2110, 2718
Bst6I	CTCTTC	4 cut(s)	77, 219, 972, 1437
BstACI	GRCGYC	2 cut(s)	68, 150
BstAFI	CTTAAG	1 cut(s)	1571
BstBAI	YACGTR	1 cut(s)	2727
BstBI	TTCGAA	1 cut(s)	2474
BstC8I	GCNNGC	5 cut(s)	512, 1680, 1753, 1961, 2295
BstDEI	CTNAG	8 cut(s)	7, 456, 1065, 1167, 1592, 2169, 2188, 2712
BstDSI	CCRYGG	2 cut(s)	1606, 2487
BstEII	GGTNACC	1 cut(s)	1406
BstF5I	GGATG	7 cut(s)	331, 502, 824, 1674, 1801, 2425, 2524
BstFNI	CGCG	3 cut(s)	920, 2223, 2411
BstH2I	RGCGCY	1 cut(s)	1797
BstHHI	GCGC	3 cut(s)	1510, 1796, 2467
BstMAI	GTCTC	8 cut(s)	64, 121, 204, 299, 633, 683, 957, 2533
BstMCI	CGRYCG	2 cut(s)	207, 1096
BstMWI	GCNNNNNNNGC	3 cut(s)	679, 1283, 2309
BstNI	CCWGG	2 cut(s)	2110, 2718
BstNSI	RCATGY	2 cut(s)	1751, 1755
BstPI	GGTNACC	1 cut(s)	1406
BstSCI	CCNGG	3 cut(s)	514, 2108, 2716
BstSFI	CTRYAG	1 cut(s)	1002
BstUI	CGCG	3 cut(s)	920, 2223, 2411
BstV1I	GCAGC	8 cut(s)	170, 174, 431, 512, 988, 1687, 1762, 1968
BstV2I	GAAGAC	1 cut(s)	2064
BstX2I	RGATCY	3 cut(s)	1359, 1822, 2398
BstXI	CCANNNNNNTGG	1 cut(s)	1403
BstYI	RGATCY	3 cut(s)	1359, 1822, 2398
Bsu15I	ATCGAT	1 cut(s)	1092
Bsu36I	CCTNAGG	1 cut(s)	1167
BsuRI	GGCC	5 cut(s)	5, 1980, 2208, 2239, 2486
BsuTUI	ATCGAT	1 cut(s)	1092
BtgI	CCRYGG	2 cut(s)	1606, 2487
BtrI	CACGTC	1 cut(s)	1280
BtsCI	GGATG	7 cut(s)	331, 502, 824, 1674, 1801, 2425, 2524
BtsI	GCAGTG	1 cut(s)	1908
BtsIMutI	CAGTG	4 cut(s)	1311, 1732, 1885, 1908
Cac8I	GCNNGC	5 cut(s)	512, 1680, 1753, 1961, 2295
CaiI	CAGNNNCTG	2 cut(s)	908, 2168
CciI	TCATGA	1 cut(s)	531
CfoI	GCGC	3 cut(s)	1510, 1796, 2467
Cfr10I	RCCGGY	2 cut(s)	1336, 1576
Cfr13I	GGNCC	5 cut(s)	593, 1367, 1610, 1623, 2113
ClaI	ATCGAT	1 cut(s)	1092
CseI	GACGC	6 cut(s)	57, 139, 926, 1527, 2234, 2515
Csp6I	GTAC	6 cut(s)	885, 1427, 2068, 2185, 2407, 2738
CspAI	ACCGGT	1 cut(s)	1336
CspCI	CAANNNNNGTGG	2 cut(s)	832, 867
CviQI	GTAC	6 cut(s)	885, 1427, 2068, 2185, 2407, 2738
DdeI	CTNAG	8 cut(s)	7, 456, 1065, 1167, 1592, 2169, 2188, 2712
DraI	TTTAAA	1 cut(s)	429
DriI	GACNNNNNGTC	1 cut(s)	2266
EaeI	YGGCCR	3 cut(s)	2206, 2237, 2484
Eam1104I	CTCTTC	4 cut(s)	77, 219, 972, 1437
Eam1105I	GACNNNNNGTC	1 cut(s)	2266
EarI	CTCTTC	4 cut(s)	77, 219, 972, 1437
EciI	GGCGGA	2 cut(s)	476, 497
Ecl136II	GAGCTC	2 cut(s)	832, 2173
Eco130I	CCWWGG	2 cut(s)	805, 1606
Eco147I	AGGCCT	1 cut(s)	1980
Eco24I	GRGCYC	2 cut(s)	834, 2175
Eco31I	GGTCTC	1 cut(s)	121
Eco47I	GGWCC	5 cut(s)	593, 1367, 1610, 1623, 2113
Eco47III	AGCGCT	1 cut(s)	1795
Eco53kI	GAGCTC	2 cut(s)	832, 2173
Eco81I	CCTNAGG	1 cut(s)	1167
Eco91I	GGTNACC	1 cut(s)	1406
EcoICRI	GAGCTC	2 cut(s)	832, 2173
EcoO65I	GGTNACC	1 cut(s)	1406
EcoRI	GAATTC	1 cut(s)	1271
EcoRII	CCWGG	2 cut(s)	2108, 2716
EcoT14I	CCWWGG	2 cut(s)	805, 1606
EcoT22I	ATGCAT	2 cut(s)	1753, 1803
EcoT38I	GRGCYC	2 cut(s)	834, 2175
ErhI	CCWWGG	2 cut(s)	805, 1606
Esp3I	CGTCTC	1 cut(s)	957
FalI	AAGNNNNNCTT	4 cut(s)	294, 326, 2426, 2458
FaqI	GGGAC	1 cut(s)	2336
FbaI	TGATCA	1 cut(s)	1875
FblI	GTMKAC	2 cut(s)	2256, 2504
FokI	GGATG	7 cut(s)	338, 509, 811, 1681, 1788, 2412, 2531
FriOI	GRGCYC	2 cut(s)	834, 2175
FspBI	CTAG	5 cut(s)	873, 1493, 1511, 1562, 1863
GlaI	GCGC	3 cut(s)	1509, 1795, 2466
GsuI	CTGGAG	1 cut(s)	1629
HaeII	RGCGCY	1 cut(s)	1797
HaeIII	GGCC	5 cut(s)	5, 1980, 2208, 2239, 2486
HgaI	GACGC	6 cut(s)	57, 139, 926, 1527, 2234, 2515
HhaI	GCGC	3 cut(s)	1510, 1796, 2467
Hin1I	GRCGYC	2 cut(s)	68, 150
Hin6I	GCGC	3 cut(s)	1508, 1794, 2465
HinP1I	GCGC	3 cut(s)	1508, 1794, 2465
HincII	GTYRAC	3 cut(s)	96, 2257, 2505
HindII	GTYRAC	3 cut(s)	96, 2257, 2505
HphI	GGTGA	5 cut(s)	256, 268, 517, 632, 1400
HpyAV	CCTTC	5 cut(s)	572, 1103, 1234, 1892, 1970
HpyCH4IV	ACGT	7 cut(s)	877, 1279, 1692, 1841, 2202, 2349, 2726
HpyF10VI	GCNNNNNNNGC	3 cut(s)	679, 1283, 2309
HpyF3I	CTNAG	8 cut(s)	7, 456, 1065, 1167, 1592, 2169, 2188, 2712
HpySE526I	ACGT	7 cut(s)	877, 1279, 1692, 1841, 2202, 2349, 2726
Hsp92I	GRCGYC	2 cut(s)	68, 150
HspAI	GCGC	3 cut(s)	1508, 1794, 2465
Kpn2I	TCCGGA	1 cut(s)	2428
Ksp22I	TGATCA	1 cut(s)	1875
LmnI	GCTCC	4 cut(s)	364, 518, 1759, 2178
Lsp1109I	GCAGC	8 cut(s)	170, 174, 431, 512, 988, 1687, 1762, 1968
LweI	GCATC	9 cut(s)	316, 487, 1642, 1696, 1810, 2011, 2361, 2442, 2557
MaeI	CTAG	5 cut(s)	873, 1493, 1511, 1562, 1863
MaeII	ACGT	7 cut(s)	877, 1279, 1692, 1841, 2202, 2349, 2726
MaeIII	GTNAC	5 cut(s)	268, 1116, 1406, 1737, 2722
MbiI	CCGCTC	2 cut(s)	1382, 2315
MfeI	CAATTG	1 cut(s)	1787
MflI	RGATCY	3 cut(s)	1359, 1822, 2398
MhlI	GDGCHC	2 cut(s)	834, 2175
MlyI	GAGTC	7 cut(s)	301, 989, 1200, 1329, 1549, 2159, 2402
MmeI	TCCRAC	4 cut(s)	1419, 1443, 1824, 2376
Mph1103I	ATGCAT	2 cut(s)	1753, 1803
MroI	TCCGGA	1 cut(s)	2428
MslI	CAYNNNNRTG	4 cut(s)	324, 530, 1750, 1931
MspA1I	CMGCKG	1 cut(s)	1959
MspCI	CTTAAG	1 cut(s)	1571
MspR9I	CCNGG	3 cut(s)	516, 2110, 2718
MunI	CAATTG	1 cut(s)	1787
Mva1269I	GAATGC	1 cut(s)	2509
MvaI	CCWGG	2 cut(s)	2110, 2718
MvnI	CGCG	3 cut(s)	920, 2223, 2411
MwoI	GCNNNNNNNGC	3 cut(s)	679, 1283, 2309
NciI	CCSGG	1 cut(s)	516
NcoI	CCATGG	1 cut(s)	1606
NlaIV	GGNNCC	6 cut(s)	864, 1761, 1824, 2114, 2400, 2703
NmeAIII	GCCGAG	1 cut(s)	953
NmuCI	GTSAC	1 cut(s)	1406
NsiI	ATGCAT	2 cut(s)	1753, 1803
NspI	RCATGY	2 cut(s)	1751, 1755
NspV	TTCGAA	1 cut(s)	2474
PaeI	GCATGC	1 cut(s)	1755
PagI	TCATGA	1 cut(s)	531
PceI	AGGCCT	1 cut(s)	1980
PcsI	WCGNNNNNNNCGW	6 cut(s)	401, 1089, 1422, 1627, 2262, 2346
PctI	GAATGC	1 cut(s)	2509
PfeI	GAWTC	6 cut(s)	733, 1193, 1296, 1419, 2192, 2272
Pfl23II	CGTACG	1 cut(s)	2067
PflFI	GACNNNGTC	2 cut(s)	91, 879
PinAI	ACCGGT	1 cut(s)	1336
Ple19I	CGATCG	1 cut(s)	1096
PleI	GAGTC	7 cut(s)	301, 988, 1200, 1328, 1549, 2159, 2401
PpsI	GAGTC	7 cut(s)	301, 988, 1200, 1328, 1549, 2159, 2401
Ppu21I	YACGTR	1 cut(s)	2727
PshBI	ATTAAT	1 cut(s)	1503
PsiI	TTATAA	1 cut(s)	1104
Psp124BI	GAGCTC	2 cut(s)	834, 2175
Psp6I	CCWGG	2 cut(s)	2108, 2716
PspEI	GGTNACC	1 cut(s)	1406
PspGI	CCWGG	2 cut(s)	2108, 2716
PspLI	CGTACG	1 cut(s)	2067
PspN4I	GGNNCC	6 cut(s)	864, 1761, 1824, 2114, 2400, 2703
PspPI	GGNCC	5 cut(s)	593, 1367, 1610, 1623, 2113
PstI	CTGCAG	1 cut(s)	1006
PstNI	CAGNNNCTG	2 cut(s)	908, 2168
PsuI	RGATCY	3 cut(s)	1359, 1822, 2398
PsyI	GACNNNGTC	2 cut(s)	91, 879
PvuI	CGATCG	1 cut(s)	1096
PvuII	CAGCTG	1 cut(s)	1959
RsaI	GTAC	6 cut(s)	886, 1428, 2069, 2186, 2408, 2739
RsaNI	GTAC	6 cut(s)	885, 1427, 2068, 2185, 2407, 2738
RseI	CAYNNNNRTG	4 cut(s)	324, 530, 1750, 1931
SacI	GAGCTC	2 cut(s)	834, 2175
SalI	GTCGAC	2 cut(s)	2255, 2503
Sau96I	GGNCC	5 cut(s)	593, 1367, 1610, 1623, 2113
SchI	GAGTC	7 cut(s)	301, 989, 1200, 1329, 1549, 2159, 2402
ScrFI	CCNGG	3 cut(s)	516, 2110, 2718
SduI	GDGCHC	2 cut(s)	834, 2175
SfaNI	GCATC	9 cut(s)	316, 487, 1642, 1696, 1810, 2011, 2361, 2442, 2557
SfcI	CTRYAG	1 cut(s)	1002
SfuI	TTCGAA	1 cut(s)	2474
SgrDI	CGTCGACG	1 cut(s)	2255
SinI	GGWCC	5 cut(s)	593, 1367, 1610, 1623, 2113
SmiMI	CAYNNNNRTG	4 cut(s)	324, 530, 1750, 1931
SmlI	CTYRAG	2 cut(s)	1121, 1571
SmoI	CTYRAG	2 cut(s)	1121, 1571
SphI	GCATGC	1 cut(s)	1755
SseBI	AGGCCT	1 cut(s)	1980
SspI	AATATT	1 cut(s)	1233
SspMI	CTAG	5 cut(s)	873, 1493, 1511, 1562, 1863
SstI	GAGCTC	2 cut(s)	834, 2175
StuI	AGGCCT	1 cut(s)	1980
StyD4I	CCNGG	3 cut(s)	514, 2108, 2716
StyI	CCWWGG	2 cut(s)	805, 1606
TaiI	ACGT	7 cut(s)	880, 1282, 1695, 1844, 2205, 2352, 2729
TaqII	GACCGA	1 cut(s)	1611
TauI	GCSGC	6 cut(s)	242, 1943, 1946, 2315, 2377, 2603
TfiI	GAWTC	6 cut(s)	733, 1193, 1296, 1419, 2192, 2272
TscAI	CASTG	4 cut(s)	1311, 1739, 1885, 1915
TseFI	GTSAC	1 cut(s)	1406
TseI	GCWGC	8 cut(s)	158, 187, 419, 500, 1001, 1675, 1775, 1956
Tsp45I	GTSAC	1 cut(s)	1406
TspDTI	ATGAA	2 cut(s)	548, 2407
TspGWI	ACGGA	7 cut(s)	1029, 1414, 1431, 1530, 1756, 2055, 2629
TspRI	CASTG	4 cut(s)	1311, 1739, 1885, 1915
Tth111I	GACNNNGTC	2 cut(s)	91, 879
Vha464I	CTTAAG	1 cut(s)	1571
VpaK11BI	GGWCC	5 cut(s)	593, 1367, 1610, 1623, 2113
VspI	ATTAAT	1 cut(s)	1503
XapI	RAATTY	3 cut(s)	654, 777, 1271
XceI	RCATGY	2 cut(s)	1751, 1755
XcmI	CCANNNNNNNNNTGG	1 cut(s)	615
XmiI	GTMKAC	2 cut(s)	2256, 2504
XspI	CTAG	5 cut(s)	873, 1493, 1511, 1562, 1863
Zsp2I	ATGCAT	2 cut(s)	1753, 1803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.