RchiOBHm_Chr5g0008501

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
5436496 .. 5440087
3592 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28946

Sequence Viewer

Length: 2751 bp
ATGCACCCTTCTAGTTTCGCCATTAATTTCATTTGTTCAACGAAGAGGAGATGGCATCCAAGTGAGAGAAGGAAAGTGGCGGCCGCCCGTGCTCGTTCGGATCATATACCAGCATCCACCGCCGTTGCCGTTGGAGTTGCTGCAGAGAACGAGAAGCAGCAGCCTTTGGAACTCGCAGCAGGATCCGTTGATGTTGTAGTTGATGCGGCTTCAGAGAATGTGAAGCAGCAGCCTGCAGTGACTTTGGAACTCACTGCACTAGTCACTGTCAAAAGGAAAAGTGAAAATAAGTTAAATACCATGAAAGAGATGATGCTTAGGCGGTTTGGCAATTATGCTTCACATAATGGCCATGGTGATCATCATAATCACAAGGGTGTTGTGCTACAGCTTGTTAGTACTCAAATCCACACAAAGGAAATGAAGCCAAACCTGAGTGAGGAAGCTATATTGGATTGGACAAGGAATTTGAAAATGGGTGCCGGGAAGACCAGTACTTACGAAGTTAAATTTGTGGTGGATTCTAACTTTGGGATGCCGGGAGCCATCACGGTTAGCAACAGAGACCGGAGCGAGTTCTATTTGGATGGCATCAACATTGAAGGTGCTATTAATTTTGCCTGCAACTCTTGGGTTCAACCGGAGTGCGAAAACCCTGCCAAAAGAATCTTCTTCTCTACCAATAAGGCATACTTACCTAGTGAAACACCAGGAGGGCTGAAAGAACTAAGAAAAATGGAGCTAACTCAACTGAGGGGTGATGGAACAGGATTTCGAAAACCATCTGATAGAATATACGACTATGACACTTACAATGACATTGGAAATCCAGATCTGGGAGATGGATACATAAGGCCCATCCTTGGAGGCAACAAACAGCCACACCCAAGACGCTGTCGAACTGGAAGGCCTCGAACCAAGACAGATGAGAATCTGGAGTCACCAGTAAATGAATTCCTGATGGCCTATGTACCTAGAGATGAAGAGTTTGAGGAGTCCAAGATAGAATCTCTTGATCTTGGAAAGTTAAAGGCAATTCTGAGGCACATTATTCCTATACTAACAACAGTCACCAGGAATACTGATGTTTTCAAGGTCCATTCAGATATCAGAGATCTGTATAGGGATATATCTTCGGTCGAAATGAACACTAAGATGAATCTTTCATGGACAAATATATTCAACAAAGTTCAGGAATTCCTCAAATTCGATCCTCCAAAGTTAGACAAAAGGATTACATCTTGTTGTTTCCCAGATGACGAGTTTGGCCGTCAAGCACTTGCAGGCATAAATCCTCTAAGCATACAGAGGCTCACAACTTTCCCACCTGTAAGCAAACTGAATGCCTCAACTTATGGCCCACAAGAATCGGCACTCAAGGAAGAACATATACTAGGCCATCTAAATGGCATGTCTGTGCAACAGGCATTGGAAGAAAACAAGCTGTTCATACTAGACTATCATGACATTTTCCTTCCGTTTATCAACCAAATAAATGCTATGGATGACCTAAAAGCTTATGCAACACGTACAATTTTCTTCCTCACCCCATTGGGAACATTGAAGCCCATCGCTATTGAGCTCAGTCTCCATCAAACCAATTCAAATTCACCATCCAGGCAGGTTCTCACTCCTCCAGTTGATGCTACAACATTTTGGCTTTGGGAACTTGGCAAAGCCCATGTATGCTCCAATGATTCCTGCGTTCATCAACTCATTCATCACTGGTTACGCTCCCATGCGTGTATGGAACCATTTATCATAGCAACTCAGCGGCAGCTGAGTGCGATGCATCCCATCTATAGACTTCTCAAGCCTCACATTCGATACACAATGAAGATAAATGCATTGGCCCGTCAGTTTCTGATCAATTCTGAAGGAATAATTGAGTCTACTTTCACTGCTGGCAAACATAGCATGGAGATTAGTTGTGCTGCATATCAAGACTGGTGGCGTTTTGACCTTGAGGGCCTTCCTGCAGATCTCATTAGAAGAGGAATGGCAATACCCGACCCCGGTCAGGTCCATGGACTAAGACTACTTATCGAAGATTATCCTTACGCAACAGATGGGCTCCTCATATGGACAGCAATTGAGAGATTGGTTCAAACCTATGTCCGTTATTACTATCCTGATGCAAGTGTGGTTCATTCTGATACAGAACTGCAAGCCTGGTACAAGGAATGGATCAATTCAGGCCATGCCGACCTTCGCCATGCTAGCTGGTGGCCACAACTCTCTACTCCAGACGATCTTGCCTCCATTCTCACCACCGTCATTTGGCTCTCATCAGCATACCACGCTGCATTGAACTATGGGCAGTATCCATATGGCGGATATGTCCCAACCCGCCCACCACACATGCGAAGACTACTGCCACAAGAGCATGAACTAGAGTATGCTACTTTCATTAAGGATCCAGAGAAATATTTTCTATCGTCATTGCCAAATTTACTAGAAACAATAAAATATATGGCTGTGCTAGATATCATCTCAGCGCACTCCCCGGATGAGGAGTATATTGCCGATAGAAAAGACTTGTCCACTTGGTCAGCTGACCCAGTTATCATTGAGGCATTTTACAGATTTTCTATGGATATGAGGAGGATTGAAAAGGAGATTGAACGAAGAAATGCCGATTCAAGACTGCGTAACAGATGTGGGCCAGGGATTCCACCATACGAGCTGCTGATGCCAAGCTCAGAACCGGGGGTTACAGCCAGAGGAGTGCCTAATAGTATATCAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

916

Amino Acids

104.21

Weight (kDa)

6.56

Isoelectric Point (pI)

54.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 146 - 225 3.2e-07 PLAT/LH2 domain
Lipoxygenase PF00305 239 - 899 4.2e-286 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1612
AccB1I GGYRCC 1 cut(s) 479
AccI GTMKAC 1 cut(s) 1892
AciI CCGC 8 cut(s) 80, 84, 120, 206, 322, 1774, 2334, 2350
AclWI GGATC 7 cut(s) 108, 177, 190, 1205, 2195, 2411, 2424
AcoI YGGCCR 4 cut(s) 81, 349, 1267, 2228
AcsI RAATTY 7 cut(s) 466, 509, 953, 1196, 1205, 1606, 2449
AcuI CTGAAG 2 cut(s) 195, 1896
AfaI GTAC 5 cut(s) 400, 496, 972, 1531, 2177
AfiI CCNNNNNNNGG 9 cut(s) 415, 439, 836, 863, 2015, 2020, 2280, 2333, 2512
AflIII ACRYGT 1 cut(s) 1526
AhlI ACTAGT 1 cut(s) 259
AjnI CCWGG 5 cut(s) 709, 1073, 1616, 2171, 2665
AjuI GAANNNNNNNTTGG 2 cut(s) 653, 685
AleI CACNNNNGTG 1 cut(s) 375
Alw21I GWGCWC 2 cut(s) 94, 1584
Alw26I GTCTC 2 cut(s) 558, 1592
AlwI GGATC 7 cut(s) 108, 177, 190, 1205, 2195, 2411, 2424
AlwNI CAGNNNCTG 1 cut(s) 1864
ApoI RAATTY 7 cut(s) 466, 509, 953, 1196, 1205, 1606, 2449
ArsI GACNNNNNNTTYG 2 cut(s) 451, 483
AseI ATTAAT 2 cut(s) 24, 612
AspLEI GCGC 1 cut(s) 2500
AspS9I GGNCC 7 cut(s) 855, 1096, 1358, 1852, 1969, 2023, 2663
AsuC2I CCSGG 5 cut(s) 484, 540, 2016, 2507, 2709
AsuHPI GGTGA 7 cut(s) 368, 770, 933, 1063, 1537, 1602, 2260
AsuII TTCGAA 1 cut(s) 775
AsuNHI GCTAGC 1 cut(s) 2219
AvaII GGWCC 2 cut(s) 1096, 2023
BalI TGGCCA 2 cut(s) 351, 2230
BamHI GGATCC 2 cut(s) 182, 2416
BanI GGYRCC 1 cut(s) 479
BanII GRGCYC 2 cut(s) 1584, 2076
BarI GAAGNNNNNNTAC 2 cut(s) 1374, 1406
BbsI GAAGAC 2 cut(s) 494, 2374
Bbv12I GWGCWC 2 cut(s) 94, 1584
BceAI ACGGC 3 cut(s) 107, 113, 1254
BcgI CGANNNNNNTGC 2 cut(s) 638, 672
BciT130I CCWGG 5 cut(s) 711, 1075, 1618, 2173, 2667
BciVI GTATCC 2 cut(s) 839, 2334
BclI TGATCA 2 cut(s) 358, 1866
BcnI CCSGG 5 cut(s) 484, 540, 2016, 2507, 2709
BcoDI GTCTC 2 cut(s) 558, 1592
BcuI ACTAGT 1 cut(s) 259
BfmI CTRYAG 5 cut(s) 141, 234, 386, 1801, 1977
BfuAI ACCTGC 1 cut(s) 1612
BfuI GTATCC 2 cut(s) 839, 2334
BglII AGATCT 3 cut(s) 832, 1114, 1981
BmcAI AGTACT 2 cut(s) 400, 496
Bme18I GGWCC 2 cut(s) 1096, 2023
BmgT120I GGNCC 7 cut(s) 855, 1096, 1358, 1852, 1969, 2023, 2663
BmiI GGNNCC 6 cut(s) 184, 481, 544, 1752, 2075, 2418
BmrI ACTGGG 1 cut(s) 2555
BmtI GCTAGC 1 cut(s) 2223
BmuI ACTGGG 1 cut(s) 2555
BoxI GACNNNNGTC 1 cut(s) 2016
BpiI GAAGAC 2 cut(s) 494, 2374
BpmI CTGGAG 3 cut(s) 956, 1620, 2229
Bpu10I CCTNAGC 1 cut(s) 317
Bpu14I TTCGAA 1 cut(s) 775
BpuEI CTTGAG 3 cut(s) 1361, 1796, 1985
BpuMI CCSGG 5 cut(s) 484, 540, 2016, 2507, 2709
BsaAI YACGTR 1 cut(s) 1529
BsaBI GATNNNNATC 1 cut(s) 930
BsaI GGTCTC 1 cut(s) 558
BsaJI CCNNGG 7 cut(s) 352, 862, 2014, 2026, 2505, 2666, 2708
BsaWI WCCGGW 2 cut(s) 567, 640
Bsc4I CCNNNNNNNGG 9 cut(s) 415, 439, 836, 863, 2015, 2020, 2280, 2333, 2512
Bse1I ACTGG 7 cut(s) 492, 907, 944, 1637, 1730, 1952, 2561
Bse3DI GCAATG 1 cut(s) 2441
Bse8I GATNNNNATC 1 cut(s) 930
BseBI CCWGG 5 cut(s) 711, 1075, 1618, 2173, 2667
BseDI CCNNGG 7 cut(s) 352, 862, 2014, 2026, 2505, 2666, 2708
BseGI GGATG 9 cut(s) 55, 113, 540, 592, 858, 1510, 1613, 1792, 2515
BseJI GATNNNNATC 1 cut(s) 930
BseLI CCNNNNNNNGG 9 cut(s) 415, 439, 836, 863, 2015, 2020, 2280, 2333, 2512
BseMI GCAATG 1 cut(s) 2441
BseMII CTCAG 8 cut(s) 425, 743, 1031, 1597, 1772, 1784, 2508, 2715
BseNI ACTGG 7 cut(s) 492, 907, 944, 1637, 1730, 1952, 2561
BseRI GAGGAG 7 cut(s) 61, 1007, 1623, 2066, 2528, 2617, 2739
BseX3I CGGCCG 1 cut(s) 81
BsgI GTGCAG 1 cut(s) 240
Bsh1285I CGRYCG 2 cut(s) 84, 1140
BshNI GGYRCC 1 cut(s) 479
BsiEI CGRYCG 2 cut(s) 84, 1140
BsiHKAI GWGCWC 2 cut(s) 94, 1584
BsiSI CCGG 7 cut(s) 483, 539, 568, 641, 2016, 2507, 2708
BslFI GGGAC 1 cut(s) 2327
BslI CCNNNNNNNGG 9 cut(s) 415, 439, 836, 863, 2015, 2020, 2280, 2333, 2512
BsmAI GTCTC 2 cut(s) 558, 1592
BsmFI GGGAC 1 cut(s) 2327
BsmI GAATGC 1 cut(s) 1348
Bso31I GGTCTC 1 cut(s) 558
Bsp119I TTCGAA 1 cut(s) 775
Bsp1286I GDGCHC 3 cut(s) 94, 1584, 2076
Bsp19I CCATGG 2 cut(s) 352, 2026
BspACI CCGC 8 cut(s) 80, 84, 120, 206, 322, 1774, 2334, 2350
BspCNI CTCAG 8 cut(s) 426, 744, 1032, 1596, 1773, 1783, 2507, 2714
BspHI TCATGA 1 cut(s) 1462
BspLI GGNNCC 6 cut(s) 184, 481, 544, 1752, 2075, 2418
BspMAI CTGCAG 3 cut(s) 145, 238, 1981
BspMI ACCTGC 1 cut(s) 1612
BspOI GCTAGC 1 cut(s) 2223
BspPI GGATC 7 cut(s) 108, 177, 190, 1205, 2195, 2411, 2424
BspT104I TTCGAA 1 cut(s) 775
BspT107I GGYRCC 1 cut(s) 479
BspTNI GGTCTC 1 cut(s) 558
BsrDI GCAATG 1 cut(s) 2441
BsrI ACTGG 7 cut(s) 492, 907, 944, 1637, 1730, 1952, 2561
BssECI CCNNGG 7 cut(s) 352, 862, 2014, 2026, 2505, 2666, 2708
BssT1I CCWWGG 3 cut(s) 352, 862, 2026
Bst2UI CCWGG 5 cut(s) 711, 1075, 1618, 2173, 2667
Bst4CI ACNGT 4 cut(s) 268, 553, 1069, 2275
Bst6I CTCTTC 3 cut(s) 38, 978, 1987
BstBAI YACGTR 1 cut(s) 1529
BstBI TTCGAA 1 cut(s) 775
BstC8I GCNNGC 6 cut(s) 234, 622, 1285, 1906, 2169, 2221
BstDSI CCRYGG 2 cut(s) 352, 2026
BstENI CCTNNNNNAGG 1 cut(s) 437
BstF5I GGATG 9 cut(s) 55, 113, 540, 592, 858, 1510, 1613, 1792, 2515
BstHHI GCGC 1 cut(s) 2500
BstMAI GTCTC 2 cut(s) 558, 1592
BstMCI CGRYCG 2 cut(s) 84, 1140
BstMWI GCNNNNNNNGC 7 cut(s) 89, 119, 1914, 2220, 2300, 2383, 2692
BstNI CCWGG 5 cut(s) 711, 1075, 1618, 2173, 2667
BstNSI RCATGY 2 cut(s) 1414, 2365
BstPAI GACNNNNGTC 1 cut(s) 2016
BstSFI CTRYAG 5 cut(s) 141, 234, 386, 1801, 1977
BstV2I GAAGAC 2 cut(s) 494, 2374
BstX2I RGATCY 5 cut(s) 182, 832, 1114, 1981, 2416
BstXI CCANNNNNNTGG 1 cut(s) 1406
BstYI RGATCY 5 cut(s) 182, 832, 1114, 1981, 2416
BstZI CGGCCG 1 cut(s) 81
BsuI GTATCC 2 cut(s) 839, 2334
BtgI CCRYGG 2 cut(s) 352, 2026
BtgZI GCGATG 2 cut(s) 1555, 1802
BtsCI GGATG 9 cut(s) 55, 113, 540, 592, 858, 1510, 1613, 1792, 2515
BtsI GCAGTG 3 cut(s) 243, 252, 1899
BtsIMutI CAGTG 5 cut(s) 243, 252, 264, 1723, 1899
BveI ACCTGC 1 cut(s) 1612
Cac8I GCNNGC 6 cut(s) 234, 622, 1285, 1906, 2169, 2221
CaiI CAGNNNCTG 1 cut(s) 1864
CciI TCATGA 1 cut(s) 1462
CciNI GCGGCCGC 1 cut(s) 81
CfoI GCGC 1 cut(s) 2500
Cfr13I GGNCC 7 cut(s) 855, 1096, 1358, 1852, 1969, 2023, 2663
CseI GACGC 1 cut(s) 900
Csp6I GTAC 5 cut(s) 399, 495, 971, 1530, 2176
CspCI CAANNNNNGTGG 4 cut(s) 106, 141, 1931, 1966
CviQI GTAC 5 cut(s) 399, 495, 971, 1530, 2176
EaeI YGGCCR 4 cut(s) 81, 349, 1267, 2228
EagI CGGCCG 1 cut(s) 81
Eam1104I CTCTTC 3 cut(s) 38, 978, 1987
EarI CTCTTC 3 cut(s) 38, 978, 1987
EciI GGCGGA 1 cut(s) 2349
Ecl136II GAGCTC 1 cut(s) 1582
EclXI CGGCCG 1 cut(s) 81
Eco130I CCWWGG 3 cut(s) 352, 862, 2026
Eco147I AGGCCT 1 cut(s) 910
Eco24I GRGCYC 2 cut(s) 1584, 2076
Eco31I GGTCTC 1 cut(s) 558
Eco32I GATATC 2 cut(s) 1108, 2488
Eco47I GGWCC 2 cut(s) 1096, 2023
Eco52I CGGCCG 1 cut(s) 81
Eco53kI GAGCTC 1 cut(s) 1582
Eco57I CTGAAG 2 cut(s) 195, 1896
EcoICRI GAGCTC 1 cut(s) 1582
EcoNI CCTNNNNNAGG 1 cut(s) 437
EcoO109I RGGNCCY 1 cut(s) 1969
EcoRI GAATTC 2 cut(s) 953, 1196
EcoRII CCWGG 5 cut(s) 709, 1073, 1616, 2171, 2665
EcoRV GATATC 2 cut(s) 1108, 2488
EcoT14I CCWWGG 3 cut(s) 352, 862, 2026
EcoT22I ATGCAT 2 cut(s) 1794, 1849
EcoT38I GRGCYC 2 cut(s) 1584, 2076
ErhI CCWWGG 3 cut(s) 352, 862, 2026
FalI AAGNNNNNCTT 2 cut(s) 677, 709
FaqI GGGAC 1 cut(s) 2327
FauI CCCGC 1 cut(s) 2357
FauNDI CATATG 2 cut(s) 2081, 2329
FbaI TGATCA 2 cut(s) 358, 1866
FblI GTMKAC 1 cut(s) 1892
FokI GGATG 9 cut(s) 42, 100, 547, 599, 845, 1517, 1600, 1779, 2522
FriOI GRGCYC 2 cut(s) 1584, 2076
GlaI GCGC 1 cut(s) 2499
GsuI CTGGAG 3 cut(s) 956, 1620, 2229
HapII CCGG 7 cut(s) 483, 539, 568, 641, 2016, 2507, 2708
HgaI GACGC 1 cut(s) 900
HhaI GCGC 1 cut(s) 2500
Hin6I GCGC 1 cut(s) 2498
HinP1I GCGC 1 cut(s) 2498
HindIII AAGCTT 1 cut(s) 1515
HpaII CCGG 7 cut(s) 483, 539, 568, 641, 2016, 2507, 2708
HphI GGTGA 7 cut(s) 368, 770, 933, 1063, 1537, 1602, 2260
Hpy166II GTNNAC 2 cut(s) 1893, 2544
Hpy8I GTNNAC 2 cut(s) 1893, 2544
HpyAV CCTTC 8 cut(s) 18, 63, 596, 900, 1484, 1871, 1982, 2219
HpyCH4III ACNGT 4 cut(s) 268, 553, 1069, 2275
HpyCH4IV ACGT 1 cut(s) 1528
HpyF10VI GCNNNNNNNGC 7 cut(s) 89, 119, 1914, 2220, 2300, 2383, 2692
HpySE526I ACGT 1 cut(s) 1528
HspAI GCGC 1 cut(s) 2498
Ksp22I TGATCA 2 cut(s) 358, 1866
LmnI GCTCC 6 cut(s) 542, 570, 739, 1694, 1739, 2079
MaeII ACGT 1 cut(s) 1528
MaeIII GTNAC 7 cut(s) 238, 262, 939, 1069, 1728, 2651, 2713
MfeI CAATTG 1 cut(s) 2091
MflI RGATCY 5 cut(s) 182, 832, 1114, 1981, 2416
MhlI GDGCHC 3 cut(s) 94, 1584, 2076
MlsI TGGCCA 2 cut(s) 351, 2230
MluNI TGGCCA 2 cut(s) 351, 2230
MlyI GAGTC 3 cut(s) 947, 1004, 1898
MmeI TCCRAC 1 cut(s) 112
Mox20I TGGCCA 2 cut(s) 351, 2230
Mph1103I ATGCAT 2 cut(s) 1794, 1849
MscI TGGCCA 2 cut(s) 351, 2230
MseI TTAA 7 cut(s) 24, 293, 507, 612, 1028, 2412, 2749
MslI CAYNNNNRTG 5 cut(s) 60, 375, 1154, 1404, 1415
Msp20I TGGCCA 2 cut(s) 351, 2230
MspA1I CMGCKG 3 cut(s) 1774, 1780, 2555
MspI CCGG 7 cut(s) 483, 539, 568, 641, 2016, 2507, 2708
MunI CAATTG 1 cut(s) 2091
Mva1269I GAATGC 1 cut(s) 1348
MvaI CCWGG 5 cut(s) 711, 1075, 1618, 2173, 2667
MwoI GCNNNNNNNGC 7 cut(s) 89, 119, 1914, 2220, 2300, 2383, 2692
NciI CCSGG 5 cut(s) 484, 540, 2016, 2507, 2709
NcoI CCATGG 2 cut(s) 352, 2026
NdeI CATATG 2 cut(s) 2081, 2329
NheI GCTAGC 1 cut(s) 2219
NlaIV GGNNCC 6 cut(s) 184, 481, 544, 1752, 2075, 2418
NmuCI GTSAC 4 cut(s) 238, 262, 939, 1069
NotI GCGGCCGC 1 cut(s) 81
NsiI ATGCAT 2 cut(s) 1794, 1849
NspI RCATGY 2 cut(s) 1414, 2365
NspV TTCGAA 1 cut(s) 775
OliI CACNNNNGTG 1 cut(s) 375
PagI TCATGA 1 cut(s) 1462
PceI AGGCCT 1 cut(s) 910
PctI GAATGC 1 cut(s) 1348
PfeI GAWTC 9 cut(s) 521, 666, 931, 1007, 1159, 1367, 1697, 2639, 2671
PflFI GACNNNGTC 1 cut(s) 894
PleI GAGTC 3 cut(s) 946, 1003, 1897
PpsI GAGTC 3 cut(s) 946, 1003, 1897
Ppu21I YACGTR 1 cut(s) 1529
PshAI GACNNNNGTC 1 cut(s) 2016
PshBI ATTAAT 2 cut(s) 24, 612
Psp124BI GAGCTC 1 cut(s) 1584
Psp6I CCWGG 5 cut(s) 709, 1073, 1616, 2171, 2665
PspGI CCWGG 5 cut(s) 709, 1073, 1616, 2171, 2665
PspN4I GGNNCC 6 cut(s) 184, 481, 544, 1752, 2075, 2418
PspPI GGNCC 7 cut(s) 855, 1096, 1358, 1852, 1969, 2023, 2663
PstI CTGCAG 3 cut(s) 145, 238, 1981
PstNI CAGNNNCTG 1 cut(s) 1864
PsuI RGATCY 5 cut(s) 182, 832, 1114, 1981, 2416
PsyI GACNNNGTC 1 cut(s) 894
PvuII CAGCTG 2 cut(s) 1780, 2555
RsaI GTAC 5 cut(s) 400, 496, 972, 1531, 2177
RsaNI GTAC 5 cut(s) 399, 495, 971, 1530, 2176
RseI CAYNNNNRTG 5 cut(s) 60, 375, 1154, 1404, 1415
SacI GAGCTC 1 cut(s) 1584
SaqAI TTAA 7 cut(s) 24, 293, 507, 612, 1028, 2412, 2749
Sau96I GGNCC 7 cut(s) 855, 1096, 1358, 1852, 1969, 2023, 2663
ScaI AGTACT 2 cut(s) 400, 496
SchI GAGTC 3 cut(s) 947, 1004, 1898
SduI GDGCHC 3 cut(s) 94, 1584, 2076
SfcI CTRYAG 5 cut(s) 141, 234, 386, 1801, 1977
SfuI TTCGAA 1 cut(s) 775
SinI GGWCC 2 cut(s) 1096, 2023
SmiMI CAYNNNNRTG 5 cut(s) 60, 375, 1154, 1404, 1415
SmlI CTYRAG 3 cut(s) 1376, 1811, 1964
SmoI CTYRAG 3 cut(s) 1376, 1811, 1964
SpeI ACTAGT 1 cut(s) 259
SseBI AGGCCT 1 cut(s) 910
SsiI CCGC 8 cut(s) 80, 84, 120, 206, 322, 1774, 2334, 2350
SspI AATATT 1 cut(s) 2429
SstI GAGCTC 1 cut(s) 1584
StuI AGGCCT 1 cut(s) 910
StyI CCWWGG 3 cut(s) 352, 862, 2026
TaaI ACNGT 4 cut(s) 268, 553, 1069, 2275
TaiI ACGT 1 cut(s) 1531
TaqI TCGA 7 cut(s) 775, 898, 913, 1140, 1209, 1825, 2046
TaqII GACCGA 1 cut(s) 1126
TatI WGTACW 2 cut(s) 398, 494
TauI GCSGC 4 cut(s) 83, 86, 209, 1777
TfiI GAWTC 9 cut(s) 521, 666, 931, 1007, 1159, 1367, 1697, 2639, 2671
Tru1I TTAA 7 cut(s) 24, 293, 507, 612, 1028, 2412, 2749
Tru9I TTAA 7 cut(s) 24, 293, 507, 612, 1028, 2412, 2749
TscAI CASTG 5 cut(s) 243, 259, 271, 1730, 1906
TseFI GTSAC 4 cut(s) 238, 262, 939, 1069
Tsp45I GTSAC 4 cut(s) 238, 262, 939, 1069
TspGWI ACGGA 3 cut(s) 175, 1467, 2108
TspRI CASTG 5 cut(s) 243, 259, 271, 1730, 1906
Tth111I GACNNNGTC 1 cut(s) 894
VpaK11BI GGWCC 2 cut(s) 1096, 2023
VspI ATTAAT 2 cut(s) 24, 612
XagI CCTNNNNNAGG 1 cut(s) 437
XapI RAATTY 7 cut(s) 466, 509, 953, 1196, 1205, 1606, 2449
XceI RCATGY 2 cut(s) 1414, 2365
XmiI GTMKAC 1 cut(s) 1892
ZrmI AGTACT 2 cut(s) 400, 496
Zsp2I ATGCAT 2 cut(s) 1794, 1849
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.