RchiOBHm_Chr3g0472481

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000650
Physical Location & Seq
Forward (+)
18384687 .. 18388356
3670 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ43818

Sequence Viewer

Length: 2595 bp
ATGGTAACATCCTCTCTTGCTCTTACCGCAGAGAAGCCTGCAGTGACTTTCGAACTCATTGCCATAATCACTGTAAAGAATATTCATCAGAAGGTAAATATCAATGTCGACACAATGCTTCATTGGTTCGGCGACAGAAGACACGATGATTACAAGGGTGGGGTACTTCTACAGCTTGTTAGTACTCAAACTGCCCCAAGTAAGTACTTGGGAGTGAAGCCGAAACTAAGCCAGGAAGCTGTATTGGATTGGACAAAGAATCCGAAAATGGGTGATGAGAAGAACAGTTACCAGGTCAAGTTTGTGGTGGACTCAACATTTGGGATGCCAGGAGCCATTACAGTGAGTAACAGATATGATGATGAATTCTATTTAGATAGCATTAACATTGAAGGTCTAGTTCACTTTGCCTGCAACTCTTGGGTCCAACCAGATCAGAAGTCTAACGCGCCAAAAAGAATCTTCTTCTCTACTAGGGTACTTGTTACAGTTACTTGCAATACAAGAAATCAATATATAGTGTTTAAGTTTGATCACTTTGACTACTATATATTGCAGGCATACTTACCCAATGAGACACCAGCTGGGCTGAAAGAGCTAAGAGAAATAGAGCTGATTCAACTGAGGGGCGATGGGACTGGGCTTAGAGTGCAATCTGATAGAATATACGACTACGACAGTTACAATGACATTGGAAATCCAGATAAGGGAATTGAGTACATGAGACCTACCCTTGGAGGCAATGTTCACCCACACCCTAGACGCTGTCGAACTGGACGCCCTCCAACCAAGACAGATGAGAATATGGAGTCACCGGTGAGCGAATTCGAGACAATCTATGTGCCTAGAGATGAAGAGTTTGAGCAGCCCAAACAAGAAGCTCTAAATGTCGGAAAGTTGAAAGGAACTGTCCGCAATATAACTCATGCACTTTCAACAATTACTGCAGATAGAAATGTCAAGGGGTATTCGGACATCAATGGTCTGTATACAGATTCTTCTTCTCTTCAATCCAAGACCCGGCCGGGAACTCAAATTTTGAACAAAGTCCACGAATTCCTCAAATTTGACCCCCCAAAATTAAAATCAAGGGAGATATATTGTCTGCCAGATGACCAATTTGGGCGCCAAACCATTGCAGGCATAAACCCTTTAAGCATAGAAAGGCTCGAGGTTTTCCCACCTGTAAGCAAACTAGATACCTCCATTTATGGTCCTCAAGAATCAGCACTCAAGGAAGAGCATATAATAGGCCAACTAAATGGCATGTCCATACAACAGGCATTGGAAGAAAACAAGCTTTTCATACTAGACTACCATGACATTTTTCTTCCATTTCTCAACAAAATAAACGCTCTAGATGACCGGAAAGCTTATGGAACACGAACAATTTTTTTCCTGACATCATTAGGAACTTTGAAGCCCATTGCTATTGAGCTCAGTCTTTCAGATTCAGCATCCAAGCAGGTTCTCACTCCTCCAATTGATGCTACGACAAGTTGGCTTTGGCAGCTTGGCAAGGCTCATGTATGCTCCAATGATGCCAGTGTTCATCAACTCGTTCATCACTGGTTACGCACCCACGCTTGCATAGAACCGACTACAATAGCAACTCATAGACAACTGAGTGTTATGCATCCTATCTGCAAGCTTCTCAAACCTCACTTGCGCTACACCTTGAAGGTAAATGCTATGGCCCGTAAGGATCTCATCAACGCCGGAGGGACAGTCGAGTCCAATTTTACTGCTGCTAAATACTGCATGGAGTTCAGTTGTGCTGCTTATCGAGATTGGTGGCGCTTTGACCTTGAAGGTCTTCCTGCAGATCTCATTAGAAGAGGAATAGCTGTACCAGACACAAGTCAAGTGCATGGGCTAAAACTACTCATTCAAGACTACCCTTATGCAACAGACGGGCTCCTCATATGGTCAGCAATTGAGACATTGGTTCAAACCTATGTTAATTACTACTACCCTAATGCAAGTTTGGTCACTTCAGATACTGAACTCCAATCCTGGTACAATGAATTTATCAATTTGGGACATGCTGATCTTCGCAACGCTAGCTGGTGGCCAAAACTCTCTACTCCGGTGGATCTCATCTCCATTCTCACCACCATCATTTGGCTCACATCAGCTCAACACGCTGCCCTAAACTTCGGGCAATACCCTTATGGTGGCTATGTCCCAACCCGCCCACCACACATGAGGAGACTAATTCCAAAAAGCAATGACCCGGAGTATGCTTCTTTCATTAGGGATCCTCAGCAGTACTTCATATACTCATTGCCGAGTTTATTTGAAGCAACGAAGTACATGGCTGTAATTGATATAATCTCGGCACATTCACCGGATGAAGAGTACATTGGGGAGAGAAAAGACTTGTCAAACTGGTCAGCTGACACTGAGATTAGTGAGGCATTTTACAGATTTGCAGTGGAGATGAGGAGGATTGAGAAAGAGATTGCACGAAGAAACGGGGATTTAAGTCTCCGGAATAGATGTGGGGCTGGGGTTTCACCATACGAGCTTCTCATGCCTAGTTCAGAACCTGGGGTTACTTGCAGAGGTGTTCCAAATAGTATAACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

864

Amino Acids

98.05

Weight (kDa)

6.27

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 59 - 156 8e-08 PLAT/LH2 domain
Lipoxygenase PF00305 196 - 847 6.2e-279 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1732
Acc36I ACCTGC 1 cut(s) 1456
AccB1I GGYRCC 1 cut(s) 1125
AccB7I CCANNNNNTGG 1 cut(s) 2124
AccI GTMKAC 2 cut(s) 108, 989
AccII CGCG 1 cut(s) 449
AccIII TCCGGA 1 cut(s) 2493
AciI CCGC 3 cut(s) 27, 913, 2194
AclWI GGATC 4 cut(s) 1713, 2103, 2255, 2268
AcoI YGGCCR 2 cut(s) 1022, 2072
AcsI RAATTY 6 cut(s) 365, 824, 1035, 1055, 1064, 2027
AcuI CTGAAG 1 cut(s) 1980
AcyI GRCGYC 2 cut(s) 778, 1126
AfiI CCNNNNNNNGG 6 cut(s) 269, 707, 734, 1020, 2124, 2177
AgeI ACCGGT 1 cut(s) 814
AjnI CCWGG 5 cut(s) 231, 291, 328, 2015, 2551
AjuI GAANNNNNNNTTGG 2 cut(s) 2349, 2381
AloI GAACNNNNNNTCC 2 cut(s) 729, 761
Alw21I GWGCWC 1 cut(s) 1440
Alw26I GTCTC 6 cut(s) 569, 718, 824, 1934, 2206, 2495
AlwI GGATC 4 cut(s) 1713, 2103, 2255, 2268
AlwNI CAGNNNCTG 2 cut(s) 2003, 2552
Ama87I CYCGRG 1 cut(s) 1169
Aor13HI TCCGGA 1 cut(s) 2493
AoxI GGCC 4 cut(s) 1022, 1252, 1695, 2072
ApeKI GCWGC 5 cut(s) 865, 1510, 1748, 1778, 2147
ApoI RAATTY 6 cut(s) 365, 824, 1035, 1055, 1064, 2027
ArsI GACNNNNNNTTYG 2 cut(s) 302, 334
AsiGI ACCGGT 1 cut(s) 814
Asp700I GAANNNNTTC 1 cut(s) 1815
AspLEI GCGC 4 cut(s) 451, 1128, 1671, 1800
AspS9I GGNCC 3 cut(s) 424, 1214, 1696
AsuC2I CCSGG 3 cut(s) 1021, 1026, 2237
AsuHPI GGTGA 7 cut(s) 284, 740, 804, 829, 2104, 2340, 2511
AsuII TTCGAA 1 cut(s) 51
AsuNHI GCTAGC 1 cut(s) 2063
AvaI CYCGRG 1 cut(s) 1169
AvaII GGWCC 2 cut(s) 424, 1214
BalI TGGCCA 1 cut(s) 2074
BamHI GGATCC 1 cut(s) 2260
BanI GGYRCC 1 cut(s) 1125
BanII GRGCYC 2 cut(s) 1440, 1920
BarI GAAGNNNNNNTAC 2 cut(s) 272, 304
BbsI GAAGAC 2 cut(s) 145, 1808
Bbv12I GWGCWC 1 cut(s) 1440
BbvCI CCTCAGC 1 cut(s) 2265
BbvI GCAGC 5 cut(s) 877, 1522, 1735, 1765, 2134
BccI CCATC 2 cut(s) 626, 2126
BcgI CGANNNNNNTGC 2 cut(s) 41, 75
BciT130I CCWGG 5 cut(s) 233, 293, 330, 2017, 2553
BclI TGATCA 1 cut(s) 532
BcnI CCSGG 3 cut(s) 1021, 1026, 2237
BcoDI GTCTC 6 cut(s) 569, 718, 824, 1934, 2206, 2495
BfaI CTAG 9 cut(s) 398, 474, 759, 846, 1196, 1310, 1358, 2064, 2541
BfmI CTRYAG 4 cut(s) 39, 170, 945, 1821
BfoI RGCGCY 2 cut(s) 1129, 1801
BfuAI ACCTGC 1 cut(s) 1456
BglII AGATCT 1 cut(s) 1825
BisI GCNGC 5 cut(s) 866, 1511, 1749, 1779, 2148
BlsI GCNGC 5 cut(s) 867, 1512, 1750, 1780, 2149
BmcAI AGTACT 3 cut(s) 184, 206, 2273
Bme1390I CCNGG 8 cut(s) 233, 293, 330, 1021, 1026, 2017, 2237, 2553
Bme18I GGWCC 2 cut(s) 424, 1214
BmeT110I CYCGRG 1 cut(s) 1169
BmgT120I GGNCC 3 cut(s) 424, 1214, 1696
BmiI GGNNCC 5 cut(s) 334, 425, 1127, 1919, 2262
BmrFI CCNGG 8 cut(s) 233, 293, 330, 1021, 1026, 2017, 2237, 2553
BmrI ACTGGG 1 cut(s) 648
BmsI GCATC 5 cut(s) 315, 1466, 1477, 1531, 1645
BmtI GCTAGC 1 cut(s) 2067
BmuI ACTGGG 1 cut(s) 648
BoxI GACNNNNGTC 1 cut(s) 1860
BpiI GAAGAC 2 cut(s) 145, 1808
Bpu10I CCTNAGC 1 cut(s) 2265
Bpu14I TTCGAA 1 cut(s) 51
BpuEI CTTGAG 2 cut(s) 1203, 1217
BpuMI CCSGG 3 cut(s) 1021, 1026, 2237
BsaHI GRCGYC 2 cut(s) 778, 1126
BsaI GGTCTC 1 cut(s) 718
BsaJI CCNNGG 2 cut(s) 733, 2552
BsaWI WCCGGW 5 cut(s) 814, 1365, 2089, 2350, 2493
BsaXI ACNNNNNCTCC 4 cut(s) 729, 759, 1713, 1743
Bsc4I CCNNNNNNNGG 6 cut(s) 269, 707, 734, 1020, 2124, 2177
Bse118I RCCGGY 1 cut(s) 814
Bse1I ACTGG 5 cut(s) 643, 778, 1545, 1574, 2396
Bse3DI GCAATG 6 cut(s) 57, 748, 1134, 1425, 2236, 2285
BseAI TCCGGA 1 cut(s) 2493
BseBI CCWGG 5 cut(s) 233, 293, 330, 2017, 2553
BseDI CCNNGG 2 cut(s) 733, 2552
BseGI GGATG 5 cut(s) 8, 330, 1457, 1636, 2359
BseLI CCNNNNNNNGG 6 cut(s) 269, 707, 734, 1020, 2124, 2177
BseMI GCAATG 6 cut(s) 57, 748, 1134, 1425, 2236, 2285
BseMII CTCAG 5 cut(s) 614, 1453, 1616, 2279, 2397
BseNI ACTGG 5 cut(s) 643, 778, 1545, 1574, 2396
BseRI GAGGAG 4 cut(s) 1467, 1910, 2224, 2461
BseX3I CGGCCG 1 cut(s) 1022
BseXI GCAGC 5 cut(s) 877, 1522, 1735, 1765, 2134
BseYI CCCAGC 2 cut(s) 584, 2510
Bsh1236I CGCG 1 cut(s) 449
Bsh1285I CGRYCG 1 cut(s) 1025
BshFI GGCC 4 cut(s) 1024, 1254, 1697, 2074
BshNI GGYRCC 1 cut(s) 1125
BshTI ACCGGT 1 cut(s) 814
BsiEI CGRYCG 1 cut(s) 1025
BsiHKAI GWGCWC 1 cut(s) 1440
BsiHKCI CYCGRG 1 cut(s) 1169
BsiSI CCGG 9 cut(s) 815, 1021, 1025, 1366, 1719, 2090, 2237, 2351, 2494
BslFI GGGAC 4 cut(s) 649, 1738, 2055, 2171
BslI CCNNNNNNNGG 6 cut(s) 269, 707, 734, 1020, 2124, 2177
BsmAI GTCTC 6 cut(s) 569, 718, 824, 1934, 2206, 2495
BsmFI GGGAC 4 cut(s) 649, 1738, 2055, 2171
BsnI GGCC 4 cut(s) 1024, 1254, 1697, 2074
Bso31I GGTCTC 1 cut(s) 718
BsoBI CYCGRG 1 cut(s) 1169
Bsp119I TTCGAA 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 1440, 1920
Bsp13I TCCGGA 1 cut(s) 2493
Bsp143I GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
BspACI CCGC 3 cut(s) 27, 913, 2194
BspANI GGCC 4 cut(s) 1024, 1254, 1697, 2074
BspCNI CTCAG 5 cut(s) 615, 1452, 1617, 2278, 2398
BspEI TCCGGA 1 cut(s) 2493
BspFNI CGCG 1 cut(s) 449
BspLI GGNNCC 5 cut(s) 334, 425, 1127, 1919, 2262
BspMAI CTGCAG 3 cut(s) 43, 949, 1825
BspMI ACCTGC 1 cut(s) 1456
BspOI GCTAGC 1 cut(s) 2067
BspPI GGATC 4 cut(s) 1713, 2103, 2255, 2268
BspQI GCTCTTC 1 cut(s) 1233
BspT104I TTCGAA 1 cut(s) 51
BspT107I GGYRCC 1 cut(s) 1125
BspTNI GGTCTC 1 cut(s) 718
BsrDI GCAATG 6 cut(s) 57, 748, 1134, 1425, 2236, 2285
BsrFI RCCGGY 1 cut(s) 814
BsrI ACTGG 5 cut(s) 643, 778, 1545, 1574, 2396
BssAI RCCGGY 1 cut(s) 814
BssECI CCNNGG 2 cut(s) 733, 2552
BssMI GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
BssNAI GTATAC 1 cut(s) 990
BssNI GRCGYC 2 cut(s) 778, 1126
BssT1I CCWWGG 1 cut(s) 733
Bst1107I GTATAC 1 cut(s) 990
Bst2UI CCWGG 5 cut(s) 233, 293, 330, 2017, 2553
Bst4CI ACNGT 8 cut(s) 73, 287, 343, 490, 680, 910, 1729, 2590
Bst6I CTCTTC 5 cut(s) 849, 1011, 1233, 1831, 2352
BstACI GRCGYC 2 cut(s) 778, 1126
BstBI TTCGAA 1 cut(s) 51
BstC8I GCNNGC 7 cut(s) 39, 412, 558, 1141, 1588, 1649, 2065
BstDEI CTNAG 8 cut(s) 227, 599, 623, 644, 1439, 1625, 2265, 2406
BstF5I GGATG 5 cut(s) 8, 330, 1457, 1636, 2359
BstFNI CGCG 1 cut(s) 449
BstH2I RGCGCY 2 cut(s) 1129, 1801
BstHHI GCGC 4 cut(s) 451, 1128, 1671, 1800
BstKTI GATC 7 cut(s) 436, 535, 1708, 1828, 2053, 2098, 2263
BstMAI GTCTC 6 cut(s) 569, 718, 824, 1934, 2206, 2495
BstMBI GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
BstMCI CGRYCG 1 cut(s) 1025
BstMWI GCNNNNNNNGC 7 cut(s) 26, 595, 649, 1510, 2064, 2144, 2536
BstNI CCWGG 5 cut(s) 233, 293, 330, 2017, 2553
BstNSI RCATGY 2 cut(s) 1270, 2048
BstPAI GACNNNNGTC 1 cut(s) 1860
BstSCI CCNGG 8 cut(s) 231, 291, 328, 1019, 1024, 2015, 2235, 2551
BstSFI CTRYAG 4 cut(s) 39, 170, 945, 1821
BstUI CGCG 1 cut(s) 449
BstV1I GCAGC 5 cut(s) 877, 1522, 1735, 1765, 2134
BstV2I GAAGAC 2 cut(s) 145, 1808
BstX2I RGATCY 4 cut(s) 1705, 1825, 2095, 2260
BstXI CCANNNNNNTGG 1 cut(s) 1262
BstYI RGATCY 4 cut(s) 1705, 1825, 2095, 2260
BstZ17I GTATAC 1 cut(s) 990
BstZI CGGCCG 1 cut(s) 1022
BsuRI GGCC 4 cut(s) 1024, 1254, 1697, 2074
BtgZI GCGATG 1 cut(s) 645
BtsCI GGATG 5 cut(s) 8, 330, 1457, 1636, 2359
BtsI GCAGTG 2 cut(s) 48, 2442
BtsIMutI CAGTG 7 cut(s) 48, 69, 348, 1552, 1567, 2403, 2442
BveI ACCTGC 1 cut(s) 1456
Cac8I GCNNGC 7 cut(s) 39, 412, 558, 1141, 1588, 1649, 2065
CaiI CAGNNNCTG 2 cut(s) 2003, 2552
CfoI GCGC 4 cut(s) 451, 1128, 1671, 1800
Cfr10I RCCGGY 1 cut(s) 814
Cfr13I GGNCC 3 cut(s) 424, 1214, 1696
CseI GACGC 2 cut(s) 771, 786
CsiI ACCWGGT 1 cut(s) 291
CspAI ACCGGT 1 cut(s) 814
DdeI CTNAG 8 cut(s) 227, 599, 623, 644, 1439, 1625, 2265, 2406
DinI GGCGCC 1 cut(s) 1127
DpnI GATC 7 cut(s) 435, 534, 1707, 1827, 2052, 2097, 2262
DpnII GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
DrdI GACNNNNNNGTC 1 cut(s) 1732
DseDI GACNNNNNNGTC 1 cut(s) 1732
EaeI YGGCCR 2 cut(s) 1022, 2072
EagI CGGCCG 1 cut(s) 1022
Eam1104I CTCTTC 5 cut(s) 849, 1011, 1233, 1831, 2352
EarI CTCTTC 5 cut(s) 849, 1011, 1233, 1831, 2352
Ecl136II GAGCTC 1 cut(s) 1438
EclXI CGGCCG 1 cut(s) 1022
Eco130I CCWWGG 1 cut(s) 733
Eco24I GRGCYC 2 cut(s) 1440, 1920
Eco31I GGTCTC 1 cut(s) 718
Eco47I GGWCC 2 cut(s) 424, 1214
Eco52I CGGCCG 1 cut(s) 1022
Eco53kI GAGCTC 1 cut(s) 1438
Eco57I CTGAAG 1 cut(s) 1980
Eco88I CYCGRG 1 cut(s) 1169
EcoICRI GAGCTC 1 cut(s) 1438
EcoRI GAATTC 3 cut(s) 365, 824, 1055
EcoRII CCWGG 5 cut(s) 231, 291, 328, 2015, 2551
EcoT14I CCWWGG 1 cut(s) 733
EcoT22I ATGCAT 1 cut(s) 1638
EcoT38I GRGCYC 2 cut(s) 1440, 1920
EgeI GGCGCC 1 cut(s) 1127
EheI GGCGCC 1 cut(s) 1127
ErhI CCWWGG 1 cut(s) 733
FaqI GGGAC 4 cut(s) 649, 1738, 2055, 2171
FauI CCCGC 1 cut(s) 2201
FauNDI CATATG 1 cut(s) 1925
FbaI TGATCA 1 cut(s) 532
FblI GTMKAC 2 cut(s) 108, 989
Fnu4HI GCNGC 5 cut(s) 866, 1511, 1749, 1779, 2148
FokI GGATG 4 cut(s) 337, 1444, 1623, 2366
FriOI GRGCYC 2 cut(s) 1440, 1920
Fsp4HI GCNGC 5 cut(s) 866, 1511, 1749, 1779, 2148
FspBI CTAG 9 cut(s) 398, 474, 759, 846, 1196, 1310, 1358, 2064, 2541
GlaI GCGC 4 cut(s) 450, 1127, 1670, 1799
GluI GCNGC 5 cut(s) 866, 1511, 1749, 1779, 2148
GsaI CCCAGC 2 cut(s) 588, 2514
HaeII RGCGCY 2 cut(s) 1129, 1801
HaeIII GGCC 4 cut(s) 1024, 1254, 1697, 2074
HapII CCGG 9 cut(s) 815, 1021, 1025, 1366, 1719, 2090, 2237, 2351, 2494
HgaI GACGC 2 cut(s) 771, 786
HhaI GCGC 4 cut(s) 451, 1128, 1671, 1800
Hin1I GRCGYC 2 cut(s) 778, 1126
Hin6I GCGC 4 cut(s) 449, 1126, 1669, 1798
HinP1I GCGC 4 cut(s) 449, 1126, 1669, 1798
HincII GTYRAC 1 cut(s) 109
HindII GTYRAC 1 cut(s) 109
HindIII AAGCTT 3 cut(s) 1298, 1371, 1649
HinfI GANTC 9 cut(s) 259, 311, 459, 616, 809, 995, 1223, 1451, 1733
HpaII CCGG 9 cut(s) 815, 1021, 1025, 1366, 1719, 2090, 2237, 2351, 2494
HphI GGTGA 7 cut(s) 284, 740, 804, 829, 2104, 2340, 2511
Hpy166II GTNNAC 6 cut(s) 109, 310, 403, 748, 990, 1051
Hpy188I TCNGA 9 cut(s) 90, 264, 438, 658, 893, 973, 1450, 1999, 2548
Hpy188III TCNNGA 8 cut(s) 701, 829, 1220, 1358, 1399, 1787, 1892, 2494
Hpy8I GTNNAC 6 cut(s) 109, 310, 403, 748, 990, 1051
HpyAV CCTTC 4 cut(s) 85, 386, 1675, 1805
HpyCH4III ACNGT 8 cut(s) 73, 287, 343, 490, 680, 910, 1729, 2590
HpyF10VI GCNNNNNNNGC 7 cut(s) 26, 595, 649, 1510, 2064, 2144, 2536
HpyF3I CTNAG 8 cut(s) 227, 599, 623, 644, 1439, 1625, 2265, 2406
Hsp92I GRCGYC 2 cut(s) 778, 1126
HspAI GCGC 4 cut(s) 449, 1126, 1669, 1798
KasI GGCGCC 1 cut(s) 1125
Kpn2I TCCGGA 1 cut(s) 2493
Ksp22I TGATCA 1 cut(s) 532
Kzo9I GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
LguI GCTCTTC 1 cut(s) 1233
LmnI GCTCC 3 cut(s) 332, 1538, 1923
Lsp1109I GCAGC 5 cut(s) 877, 1522, 1735, 1765, 2134
LweI GCATC 5 cut(s) 315, 1466, 1477, 1531, 1645
MabI ACCWGGT 1 cut(s) 291
MaeI CTAG 9 cut(s) 398, 474, 759, 846, 1196, 1310, 1358, 2064, 2541
MalI GATC 7 cut(s) 435, 534, 1707, 1827, 2052, 2097, 2262
MboI GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
MfeI CAATTG 2 cut(s) 1482, 1935
MflI RGATCY 4 cut(s) 1705, 1825, 2095, 2260
MhlI GDGCHC 2 cut(s) 1440, 1920
MlsI TGGCCA 1 cut(s) 2074
MluNI TGGCCA 1 cut(s) 2074
Mly113I GGCGCC 1 cut(s) 1126
MlyI GAGTC 3 cut(s) 305, 818, 1742
MmeI TCCRAC 3 cut(s) 451, 809, 871
Mox20I TGGCCA 1 cut(s) 2074
Mph1103I ATGCAT 1 cut(s) 1638
MroI TCCGGA 1 cut(s) 2493
MroXI GAANNNNTTC 1 cut(s) 1815
MscI TGGCCA 1 cut(s) 2074
MseI TTAA 6 cut(s) 384, 525, 1082, 1154, 1962, 2486
MslI CAYNNNNRTG 1 cut(s) 341
Msp20I TGGCCA 1 cut(s) 2074
MspA1I CMGCKG 2 cut(s) 584, 2399
MspI CCGG 9 cut(s) 815, 1021, 1025, 1366, 1719, 2090, 2237, 2351, 2494
MspR9I CCNGG 8 cut(s) 233, 293, 330, 1021, 1026, 2017, 2237, 2553
MunI CAATTG 2 cut(s) 1482, 1935
MvaI CCWGG 5 cut(s) 233, 293, 330, 2017, 2553
MvnI CGCG 1 cut(s) 449
MwoI GCNNNNNNNGC 7 cut(s) 26, 595, 649, 1510, 2064, 2144, 2536
NarI GGCGCC 1 cut(s) 1126
NciI CCSGG 3 cut(s) 1021, 1026, 2237
NdeI CATATG 1 cut(s) 1925
NdeII GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
NheI GCTAGC 1 cut(s) 2063
NlaIV GGNNCC 5 cut(s) 334, 425, 1127, 1919, 2262
NmeAIII GCCGAG 2 cut(s) 2316, 2318
NmuCI GTSAC 3 cut(s) 43, 810, 1990
NsiI ATGCAT 1 cut(s) 1638
NspI RCATGY 2 cut(s) 1270, 2048
NspV TTCGAA 1 cut(s) 51
PaeR7I CTCGAG 1 cut(s) 1169
PciSI GCTCTTC 1 cut(s) 1233
PdmI GAANNNNTTC 1 cut(s) 1815
PfeI GAWTC 6 cut(s) 259, 459, 616, 995, 1223, 1451
PflFI GACNNNGTC 1 cut(s) 765
PflMI CCANNNNNTGG 1 cut(s) 2124
PinAI ACCGGT 1 cut(s) 814
PkrI GCNGC 5 cut(s) 867, 1512, 1750, 1780, 2149
PleI GAGTC 3 cut(s) 305, 817, 1741
PluTI GGCGCC 1 cut(s) 1129
PpsI GAGTC 3 cut(s) 305, 817, 1741
PshAI GACNNNNGTC 1 cut(s) 1860
Psp124BI GAGCTC 1 cut(s) 1440
Psp6I CCWGG 5 cut(s) 231, 291, 328, 2015, 2551
PspFI CCCAGC 2 cut(s) 584, 2510
PspGI CCWGG 5 cut(s) 231, 291, 328, 2015, 2551
PspN4I GGNNCC 5 cut(s) 334, 425, 1127, 1919, 2262
PspPI GGNCC 3 cut(s) 424, 1214, 1696
PspXI VCTCGAGB 1 cut(s) 1169
PstI CTGCAG 3 cut(s) 43, 949, 1825
PstNI CAGNNNCTG 2 cut(s) 2003, 2552
PsuI RGATCY 4 cut(s) 1705, 1825, 2095, 2260
PsyI GACNNNGTC 1 cut(s) 765
PvuII CAGCTG 2 cut(s) 584, 2399
RseI CAYNNNNRTG 1 cut(s) 341
SacI GAGCTC 1 cut(s) 1440
SalI GTCGAC 1 cut(s) 107
SapI GCTCTTC 1 cut(s) 1233
SaqAI TTAA 6 cut(s) 384, 525, 1082, 1154, 1962, 2486
SatI GCNGC 5 cut(s) 866, 1511, 1749, 1779, 2148
Sau3AI GATC 7 cut(s) 433, 532, 1705, 1825, 2050, 2095, 2260
Sau96I GGNCC 3 cut(s) 424, 1214, 1696
ScaI AGTACT 3 cut(s) 184, 206, 2273
SchI GAGTC 3 cut(s) 305, 818, 1742
ScrFI CCNGG 8 cut(s) 233, 293, 330, 1021, 1026, 2017, 2237, 2553
SduI GDGCHC 2 cut(s) 1440, 1920
SexAI ACCWGGT 1 cut(s) 291
SfaNI GCATC 5 cut(s) 315, 1466, 1477, 1531, 1645
SfcI CTRYAG 4 cut(s) 39, 170, 945, 1821
SfoI GGCGCC 1 cut(s) 1127
Sfr274I CTCGAG 1 cut(s) 1169
SfuI TTCGAA 1 cut(s) 51
SgrAI CRCCGGYG 1 cut(s) 814
SinI GGWCC 2 cut(s) 424, 1214
SlaI CTCGAG 1 cut(s) 1169
SmiMI CAYNNNNRTG 1 cut(s) 341
SmlI CTYRAG 3 cut(s) 1169, 1218, 1232
SmoI CTYRAG 3 cut(s) 1169, 1218, 1232
SsiI CCGC 3 cut(s) 27, 913, 2194
SspDI GGCGCC 1 cut(s) 1125
SspI AATATT 1 cut(s) 82
SspMI CTAG 9 cut(s) 398, 474, 759, 846, 1196, 1310, 1358, 2064, 2541
SstI GAGCTC 1 cut(s) 1440
StyD4I CCNGG 8 cut(s) 231, 291, 328, 1019, 1024, 2015, 2235, 2551
StyI CCWWGG 1 cut(s) 733
TaaI ACNGT 8 cut(s) 73, 287, 343, 490, 680, 910, 1729, 2590
TaqI TCGA 7 cut(s) 51, 108, 769, 828, 1170, 1731, 1786
TatI WGTACW 6 cut(s) 182, 204, 717, 2271, 2313, 2361
TfiI GAWTC 6 cut(s) 259, 459, 616, 995, 1223, 1451
Tru1I TTAA 6 cut(s) 384, 525, 1082, 1154, 1962, 2486
Tru9I TTAA 6 cut(s) 384, 525, 1082, 1154, 1962, 2486
TscAI CASTG 7 cut(s) 48, 76, 348, 1552, 1574, 2410, 2442
TseFI GTSAC 3 cut(s) 43, 810, 1990
TseI GCWGC 5 cut(s) 865, 1510, 1748, 1778, 2147
Tsp45I GTSAC 3 cut(s) 43, 810, 1990
TspRI CASTG 7 cut(s) 48, 76, 348, 1552, 1574, 2410, 2442
Tth111I GACNNNGTC 1 cut(s) 765
Van91I CCANNNNNTGG 1 cut(s) 2124
VpaK11BI GGWCC 2 cut(s) 424, 1214
XapI RAATTY 6 cut(s) 365, 824, 1035, 1055, 1064, 2027
XbaI TCTAGA 1 cut(s) 1357
XceI RCATGY 2 cut(s) 1270, 2048
XhoI CTCGAG 1 cut(s) 1169
XmiI GTMKAC 2 cut(s) 108, 989
XmnI GAANNNNTTC 1 cut(s) 1815
XspI CTAG 9 cut(s) 398, 474, 759, 846, 1196, 1310, 1358, 2064, 2541
ZrmI AGTACT 3 cut(s) 184, 206, 2273
Zsp2I ATGCAT 1 cut(s) 1638
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.