Rw3G016380

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000650
Physical Location & Seq
Reverse (-)
17302805 .. 17308243
5439 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G016380.1

Sequence Viewer

Length: 2733 bp
ATGGCATCTATTATGGGCGTAACTCTGGTAGCACATGATTTCAATCCCCTTAGTTCAAAACCAAGAGCCTTAAGCATCCAAAAACTTCCTTCTCCTGCCAATTTGTTTTCTTCGACGACCAAGACAAGGAGAGTCGAGTTACAATGGAAGAAGAAGAAGATGGCAAACGTAGCGGTAGTGAATCTTAATACAACAACCAATGGTGCTCTTGATCATGTGGATGTAAATATCAATGTCGACTCTCTTGCTCTTACCGCAGAGAAGCCTGCAGTGACTTTCGAACTCATTGCCATAATCACTGTAAAGAATATTCATCAGAAGGTAAATATCAATGTCGACACAATGCTTCATTGGTTCGGCGACAGAAGACACGATGATTACAAGGGTGGGGTACTTCTACAGCTTGTTAGTACTCAAACTGCCCCAAAGGGAGTGAAGCCGAAACTAAGCCAGGAAGCTGTATTGGATTGGACAAAGAATCCGAAAATGGGTGATGAGAAGAACAGTTACCAAGTCAAGTTTGTGGTGGACTCAACATTTGGGATGCCAGGAGCCATTACAGTGAGTAACAGATATGCTGATGAGTTCTATTTAGATAGCATTAACATTGAAGGTCTAGTTCACTTTGCCTGCAACTCTTGGGTCCAACCAGATCAGAAGTCTAACGCGCCAAAAAGAATCTTCTTCTCTACTAGGGCATACTTACCCAATGAGACACCAGCTGGGCTGAAAGAGCTAAGAGAAATGGAGCTGATTCAACTGAGGGGCGATGGGACTGGGCTTAGGGTGCAATCTGATAGAATATACGACTACGACAGTTACAATGACATTGGAAATCCAGATAAGGGAATTGAGTACATGAGACCTACCCTTGGAGGCAATGTTCACCCACACCCTAGACGCTGTCGAACTGGACGCCCTCCAACCAAGACAGATGAGAATATGGAGTCACCAGTGAGCGAATTCGAGACAATCTATGTGCCTAGAGATGAAGAGTTTGAGCAGCCCAAACAAGAAGCTCTAAATGTCGGAAAATTGAAAGGAACTGTCCGCAATATAACTCATGCACTTTCAACAATTACTGCAGATAGAAATGTCAAGGGGTATTCGGACATCAATGGTCTGTATACAGATTCTTCTTCTCTTCAATCCGAGACCCAGCCGGGAACTCAAATTTTGAACCAAGTCCACGAATTCCTCAAATTTGACCCCCCAAAATTAAAATCAAGGGAGATATATTGTCTGCCAGATGACCAATTTGGGCGCCAAACCATTGCAGGCATAAACCCTTTAAGCATAGAAAGGCTCGAGGTTTTCCCACCTGTAAGCAAACTAGATACCTCCATTTATGGTCCTCAAGAATCAGCACTCAAGGAAGAGCATATAATAGGCCAACTAAATGGCATGTCCATACAACAGGCATTGGAAGAAAACAAGCTTTTCATACTAGACTACCATGACATTTTTCTTCCATTTCTCAACAAAATAAACGCTCTAGATGACCGGAAAGCTTATGCAACACGAACAATTTTTTTCCTGACATCATTAGGAACTTTGAAGCCCATTGCTATTGAGCTCAGTCTTTCAGATTCAGCATCCAAGCAGGTTCTCACTCCTCCAATTGATGCTACGACAAGTTGGCTTTGGCAGCTTGGCAAGGCTCATGTATGCTCCAATGATGCCAGTGTTCATCAACTTGTTCATCACTGGTTACGCACCCACGCCGGCATAGAACCGATTACAATAGCAACTCATAGACAACTGAGTGTTATGCATCCTATCTACAAGCTTCTCAAACCTCACTTGCGCTACACCTTGAAGATAAATGCTATGGCCCGTAAGGATCTCATCAACGCCGGAGGGATAGTCGAGTCCAATTTTACTGCTGCCAAATACTGCATGGAGTTCAGTTGTGCTGCTTATCGAGATTGGTGGCGCTTTGACCTTGAAGGTCTTCCTGCAGATCTCATTAGAAGAGGAATAGCTGTACCAGACACAAGTCAAGTGCATGGGCTAAAACTACTCATTCAAGACTACCCTTATGCAACAGACGGGCTCCTCATATGGTCAGCAATTGAGACATTGGTTCAAACCTATGTTAATTACTACTACCCTAATGCAAGTTTGGTCACTTCAGATACTGAACTCCAATCCTGGTACAATGAATTTATCAATTTGGGACATGCTGATCTTCGCAACGCTAGCTGGTGGCCAAAACTCTCTACTCCGGTGGATCTCATCTCCATTCTCACCACCATCATTTGGCTCACGTCAGCTCAACACGCAGCCCTAAACTTCGGGCAATACCCTTATGGTGGCTATGTCCCAACCCGCCCACCACACATGAGGAGACTAATTCCAAAAAACAATGACCCGGAGTATGCTTCTTTCATTAGGGATCCTCAGCAGTACTTCATATCCTCATTGCCGAGTTTATTTGAAGCAACGAAGTACATGGCTGTAATTGATATAATCTCGGCACATTCACCGGATGAAGAGTACATTGGGGAGAGAAAAGACTTGTCAAACTGGTCAGCTGACACTGAGATTAGTGAGGCATTTTACAGATTTTCAGTGGAGATGAGGAGGATTGAGAAAGAGATTGCACGAAGAAACGGGGATTTAAGTCTCCGGAATAGATGTGGGGCTGGGGTTTCACCATACGAGCTTCTCATGCCTAGTTCAGAACCTGGGGTTACTTGCAGAGGTGTTCCAAATAGTATAACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

910

Amino Acids

102.65

Weight (kDa)

6.43

Isoelectric Point (pI)

44.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 146 - 229 1.7e-06 PLAT/LH2 domain
Lipoxygenase PF00305 242 - 893 1.7e-281 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1594
AccB1I GGYRCC 1 cut(s) 1263
AccB7I CCANNNNNTGG 1 cut(s) 2262
AccI GTMKAC 3 cut(s) 237, 336, 1127
AccII CGCG 1 cut(s) 668
AccIII TCCGGA 1 cut(s) 2631
AciI CCGC 4 cut(s) 173, 255, 1051, 2332
AclWI GGATC 4 cut(s) 1851, 2241, 2393, 2406
AcoI YGGCCR 1 cut(s) 2210
AcsI RAATTY 5 cut(s) 962, 1173, 1193, 1202, 2165
AcuI CTGAAG 1 cut(s) 2118
AcyI GRCGYC 2 cut(s) 916, 1264
AfaI GTAC 8 cut(s) 393, 412, 857, 1989, 2159, 2411, 2453, 2501
AfiI CCNNNNNNNGG 6 cut(s) 126, 488, 845, 872, 2262, 2315
AflII CTTAAG 1 cut(s) 70
AjiI CACGTC 1 cut(s) 2271
AjnI CCWGG 4 cut(s) 450, 547, 2153, 2689
AjuI GAANNNNNNNTTGG 2 cut(s) 2487, 2519
AloI GAACNNNNNNTCC 2 cut(s) 867, 899
Alw21I GWGCWC 2 cut(s) 208, 1578
Alw26I GTCTC 7 cut(s) 707, 856, 962, 1148, 2072, 2344, 2633
AlwI GGATC 4 cut(s) 1851, 2241, 2393, 2406
AlwNI CAGNNNCTG 2 cut(s) 2141, 2690
Ama87I CYCGRG 1 cut(s) 1307
Aor13HI TCCGGA 1 cut(s) 2631
AoxI GGCC 3 cut(s) 1390, 1833, 2210
ApeKI GCWGC 5 cut(s) 1003, 1648, 1886, 1916, 2285
ApoI RAATTY 5 cut(s) 962, 1173, 1193, 1202, 2165
ArsI GACNNNNNNTTYG 2 cut(s) 521, 553
Asp700I GAANNNNTTC 1 cut(s) 1953
AspLEI GCGC 4 cut(s) 670, 1266, 1809, 1938
AspS9I GGNCC 3 cut(s) 643, 1352, 1834
AsuC2I CCSGG 2 cut(s) 1164, 2375
AsuHPI GGTGA 6 cut(s) 503, 878, 942, 2242, 2478, 2649
AsuII TTCGAA 1 cut(s) 279
AsuNHI GCTAGC 1 cut(s) 2201
AvaI CYCGRG 1 cut(s) 1307
AvaII GGWCC 2 cut(s) 643, 1352
BalI TGGCCA 1 cut(s) 2212
BamHI GGATCC 1 cut(s) 2398
BanI GGYRCC 1 cut(s) 1263
BanII GRGCYC 2 cut(s) 1578, 2058
BarI GAAGNNNNNNTAC 2 cut(s) 491, 523
BbsI GAAGAC 2 cut(s) 373, 1946
Bbv12I GWGCWC 2 cut(s) 208, 1578
BbvCI CCTCAGC 1 cut(s) 2403
BbvI GCAGC 5 cut(s) 1015, 1660, 1873, 1903, 2297
BccI CCATC 3 cut(s) 154, 764, 2264
BcgI CGANNNNNNTGC 4 cut(s) 227, 261, 269, 303
BciT130I CCWGG 4 cut(s) 452, 549, 2155, 2691
BclI TGATCA 1 cut(s) 211
BcnI CCSGG 2 cut(s) 1164, 2375
BcoDI GTCTC 7 cut(s) 707, 856, 962, 1148, 2072, 2344, 2633
BfaI CTAG 9 cut(s) 617, 693, 897, 984, 1334, 1448, 1496, 2202, 2679
BfmI CTRYAG 4 cut(s) 267, 398, 1083, 1959
BfoI RGCGCY 2 cut(s) 1267, 1939
BfrI CTTAAG 1 cut(s) 70
BfuAI ACCTGC 1 cut(s) 1594
BglII AGATCT 1 cut(s) 1963
BisI GCNGC 5 cut(s) 1004, 1649, 1887, 1917, 2286
BlsI GCNGC 5 cut(s) 1005, 1650, 1888, 1918, 2287
BmcAI AGTACT 2 cut(s) 412, 2411
Bme1390I CCNGG 6 cut(s) 452, 549, 1164, 2155, 2375, 2691
Bme18I GGWCC 2 cut(s) 643, 1352
BmeT110I CYCGRG 1 cut(s) 1307
BmgBI CACGTC 1 cut(s) 2271
BmgT120I GGNCC 3 cut(s) 643, 1352, 1834
BmiI GGNNCC 5 cut(s) 553, 644, 1265, 2057, 2400
BmrFI CCNGG 6 cut(s) 452, 549, 1164, 2155, 2375, 2691
BmrI ACTGGG 1 cut(s) 786
BmsI GCATC 7 cut(s) 14, 84, 534, 1604, 1615, 1669, 1783
BmtI GCTAGC 1 cut(s) 2205
BmuI ACTGGG 1 cut(s) 786
BoxI GACNNNNGTC 1 cut(s) 1998
BpiI GAAGAC 2 cut(s) 373, 1946
Bpu10I CCTNAGC 2 cut(s) 782, 2403
Bpu14I TTCGAA 1 cut(s) 279
BpuEI CTTGAG 2 cut(s) 1341, 1355
BpuMI CCSGG 2 cut(s) 1164, 2375
BsaBI GATNNNNATC 1 cut(s) 42
BsaHI GRCGYC 2 cut(s) 916, 1264
BsaI GGTCTC 2 cut(s) 856, 1148
BsaJI CCNNGG 2 cut(s) 871, 2690
BsaWI WCCGGW 4 cut(s) 1503, 2227, 2488, 2631
BsaXI ACNNNNNCTCC 4 cut(s) 867, 897, 1851, 1881
Bsc4I CCNNNNNNNGG 6 cut(s) 126, 488, 845, 872, 2262, 2315
Bse118I RCCGGY 1 cut(s) 1724
Bse1I ACTGG 6 cut(s) 781, 916, 953, 1683, 1712, 2534
Bse3DI GCAATG 5 cut(s) 285, 886, 1272, 1563, 2423
Bse8I GATNNNNATC 1 cut(s) 42
BseAI TCCGGA 1 cut(s) 2631
BseBI CCWGG 4 cut(s) 452, 549, 2155, 2691
BseDI CCNNGG 2 cut(s) 871, 2690
BseGI GGATG 6 cut(s) 75, 226, 549, 1595, 1774, 2497
BseJI GATNNNNATC 1 cut(s) 42
BseLI CCNNNNNNNGG 6 cut(s) 126, 488, 845, 872, 2262, 2315
BseMI GCAATG 5 cut(s) 285, 886, 1272, 1563, 2423
BseMII CTCAG 5 cut(s) 752, 1591, 1754, 2417, 2535
BseNI ACTGG 6 cut(s) 781, 916, 953, 1683, 1712, 2534
BseRI GAGGAG 4 cut(s) 1605, 2048, 2362, 2599
BseXI GCAGC 5 cut(s) 1015, 1660, 1873, 1903, 2297
BseYI CCCAGC 3 cut(s) 722, 1158, 2648
Bsh1236I CGCG 1 cut(s) 668
BshFI GGCC 3 cut(s) 1392, 1835, 2212
BshNI GGYRCC 1 cut(s) 1263
BsiHKAI GWGCWC 2 cut(s) 208, 1578
BsiHKCI CYCGRG 1 cut(s) 1307
BsiSI CCGG 8 cut(s) 1163, 1504, 1725, 1857, 2228, 2375, 2489, 2632
BslFI GGGAC 3 cut(s) 787, 2193, 2309
BslI CCNNNNNNNGG 6 cut(s) 126, 488, 845, 872, 2262, 2315
BsmAI GTCTC 7 cut(s) 707, 856, 962, 1148, 2072, 2344, 2633
BsmFI GGGAC 3 cut(s) 787, 2193, 2309
BsnI GGCC 3 cut(s) 1392, 1835, 2212
Bso31I GGTCTC 2 cut(s) 856, 1148
BsoBI CYCGRG 1 cut(s) 1307
Bsp119I TTCGAA 1 cut(s) 279
Bsp1286I GDGCHC 3 cut(s) 208, 1578, 2058
Bsp13I TCCGGA 1 cut(s) 2631
Bsp143I GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
BspACI CCGC 4 cut(s) 173, 255, 1051, 2332
BspANI GGCC 3 cut(s) 1392, 1835, 2212
BspCNI CTCAG 5 cut(s) 753, 1590, 1755, 2416, 2536
BspEI TCCGGA 1 cut(s) 2631
BspFNI CGCG 1 cut(s) 668
BspLI GGNNCC 5 cut(s) 553, 644, 1265, 2057, 2400
BspMAI CTGCAG 3 cut(s) 271, 1087, 1963
BspMI ACCTGC 1 cut(s) 1594
BspOI GCTAGC 1 cut(s) 2205
BspPI GGATC 4 cut(s) 1851, 2241, 2393, 2406
BspQI GCTCTTC 1 cut(s) 1371
BspT104I TTCGAA 1 cut(s) 279
BspT107I GGYRCC 1 cut(s) 1263
BspTI CTTAAG 1 cut(s) 70
BspTNI GGTCTC 2 cut(s) 856, 1148
BsrDI GCAATG 5 cut(s) 285, 886, 1272, 1563, 2423
BsrFI RCCGGY 1 cut(s) 1724
BsrI ACTGG 6 cut(s) 781, 916, 953, 1683, 1712, 2534
BssAI RCCGGY 1 cut(s) 1724
BssECI CCNNGG 2 cut(s) 871, 2690
BssMI GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
BssNAI GTATAC 1 cut(s) 1128
BssNI GRCGYC 2 cut(s) 916, 1264
BssT1I CCWWGG 1 cut(s) 871
Bst1107I GTATAC 1 cut(s) 1128
Bst2UI CCWGG 4 cut(s) 452, 549, 2155, 2691
Bst4CI ACNGT 6 cut(s) 301, 506, 562, 818, 1048, 2728
Bst6I CTCTTC 5 cut(s) 987, 1149, 1371, 1969, 2490
BstACI GRCGYC 2 cut(s) 916, 1264
BstAFI CTTAAG 1 cut(s) 70
BstBI TTCGAA 1 cut(s) 279
BstC8I GCNNGC 5 cut(s) 267, 631, 1279, 1726, 2203
BstDEI CTNAG 9 cut(s) 50, 446, 737, 761, 782, 1577, 1763, 2403, 2544
BstF5I GGATG 6 cut(s) 75, 226, 549, 1595, 1774, 2497
BstFNI CGCG 1 cut(s) 668
BstH2I RGCGCY 2 cut(s) 1267, 1939
BstHHI GCGC 4 cut(s) 670, 1266, 1809, 1938
BstKTI GATC 7 cut(s) 214, 655, 1846, 1966, 2191, 2236, 2401
BstMAI GTCTC 7 cut(s) 707, 856, 962, 1148, 2072, 2344, 2633
BstMBI GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
BstMWI GCNNNNNNNGC 8 cut(s) 170, 254, 733, 787, 1648, 2202, 2282, 2674
BstNI CCWGG 4 cut(s) 452, 549, 2155, 2691
BstNSI RCATGY 2 cut(s) 1408, 2186
BstPAI GACNNNNGTC 1 cut(s) 1998
BstSCI CCNGG 6 cut(s) 450, 547, 1162, 2153, 2373, 2689
BstSFI CTRYAG 4 cut(s) 267, 398, 1083, 1959
BstUI CGCG 1 cut(s) 668
BstV1I GCAGC 5 cut(s) 1015, 1660, 1873, 1903, 2297
BstV2I GAAGAC 2 cut(s) 373, 1946
BstX2I RGATCY 4 cut(s) 1843, 1963, 2233, 2398
BstXI CCANNNNNNTGG 1 cut(s) 1400
BstYI RGATCY 4 cut(s) 1843, 1963, 2233, 2398
BstZ17I GTATAC 1 cut(s) 1128
BsuRI GGCC 3 cut(s) 1392, 1835, 2212
BtgZI GCGATG 1 cut(s) 783
BtrI CACGTC 1 cut(s) 2271
BtsCI GGATG 6 cut(s) 75, 226, 549, 1595, 1774, 2497
BtsI GCAGTG 1 cut(s) 276
BtsIMutI CAGTG 8 cut(s) 276, 297, 567, 960, 1690, 1705, 2541, 2580
BveI ACCTGC 1 cut(s) 1594
Cac8I GCNNGC 5 cut(s) 267, 631, 1279, 1726, 2203
CaiI CAGNNNCTG 2 cut(s) 2141, 2690
CfoI GCGC 4 cut(s) 670, 1266, 1809, 1938
Cfr10I RCCGGY 1 cut(s) 1724
Cfr13I GGNCC 3 cut(s) 643, 1352, 1834
CseI GACGC 2 cut(s) 909, 924
Csp6I GTAC 8 cut(s) 392, 411, 856, 1988, 2158, 2410, 2452, 2500
CviQI GTAC 8 cut(s) 392, 411, 856, 1988, 2158, 2410, 2452, 2500
DdeI CTNAG 9 cut(s) 50, 446, 737, 761, 782, 1577, 1763, 2403, 2544
DinI GGCGCC 1 cut(s) 1265
DpnI GATC 7 cut(s) 213, 654, 1845, 1965, 2190, 2235, 2400
DpnII GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
EaeI YGGCCR 1 cut(s) 2210
Eam1104I CTCTTC 5 cut(s) 987, 1149, 1371, 1969, 2490
EarI CTCTTC 5 cut(s) 987, 1149, 1371, 1969, 2490
Ecl136II GAGCTC 1 cut(s) 1576
Eco130I CCWWGG 1 cut(s) 871
Eco24I GRGCYC 2 cut(s) 1578, 2058
Eco31I GGTCTC 2 cut(s) 856, 1148
Eco47I GGWCC 2 cut(s) 643, 1352
Eco53kI GAGCTC 1 cut(s) 1576
Eco57I CTGAAG 1 cut(s) 2118
Eco88I CYCGRG 1 cut(s) 1307
EcoICRI GAGCTC 1 cut(s) 1576
EcoRI GAATTC 2 cut(s) 962, 1193
EcoRII CCWGG 4 cut(s) 450, 547, 2153, 2689
EcoT14I CCWWGG 1 cut(s) 871
EcoT22I ATGCAT 1 cut(s) 1776
EcoT38I GRGCYC 2 cut(s) 1578, 2058
EgeI GGCGCC 1 cut(s) 1265
EheI GGCGCC 1 cut(s) 1265
ErhI CCWWGG 1 cut(s) 871
FaqI GGGAC 3 cut(s) 787, 2193, 2309
FauI CCCGC 1 cut(s) 2339
FauNDI CATATG 1 cut(s) 2063
FbaI TGATCA 1 cut(s) 211
FblI GTMKAC 3 cut(s) 237, 336, 1127
Fnu4HI GCNGC 5 cut(s) 1004, 1649, 1887, 1917, 2286
FokI GGATG 6 cut(s) 62, 233, 556, 1582, 1761, 2504
FriOI GRGCYC 2 cut(s) 1578, 2058
Fsp4HI GCNGC 5 cut(s) 1004, 1649, 1887, 1917, 2286
FspBI CTAG 9 cut(s) 617, 693, 897, 984, 1334, 1448, 1496, 2202, 2679
GlaI GCGC 4 cut(s) 669, 1265, 1808, 1937
GluI GCNGC 5 cut(s) 1004, 1649, 1887, 1917, 2286
GsaI CCCAGC 3 cut(s) 726, 1162, 2652
HaeII RGCGCY 2 cut(s) 1267, 1939
HaeIII GGCC 3 cut(s) 1392, 1835, 2212
HapII CCGG 8 cut(s) 1163, 1504, 1725, 1857, 2228, 2375, 2489, 2632
HgaI GACGC 2 cut(s) 909, 924
HhaI GCGC 4 cut(s) 670, 1266, 1809, 1938
Hin1I GRCGYC 2 cut(s) 916, 1264
Hin6I GCGC 4 cut(s) 668, 1264, 1807, 1936
HinP1I GCGC 4 cut(s) 668, 1264, 1807, 1936
HincII GTYRAC 2 cut(s) 238, 337
HindII GTYRAC 2 cut(s) 238, 337
HindIII AAGCTT 3 cut(s) 1436, 1509, 1787
HpaII CCGG 8 cut(s) 1163, 1504, 1725, 1857, 2228, 2375, 2489, 2632
HphI GGTGA 6 cut(s) 503, 878, 942, 2242, 2478, 2649
Hpy166II GTNNAC 7 cut(s) 238, 337, 529, 622, 886, 1128, 1189
Hpy188III TCNNGA 9 cut(s) 209, 839, 967, 1358, 1496, 1537, 1925, 2030, 2632
Hpy8I GTNNAC 7 cut(s) 238, 337, 529, 622, 886, 1128, 1189
Hpy99I CGWCG 1 cut(s) 118
HpyAV CCTTC 4 cut(s) 99, 313, 605, 1943
HpyCH4III ACNGT 6 cut(s) 301, 506, 562, 818, 1048, 2728
HpyCH4IV ACGT 2 cut(s) 168, 2270
HpyF10VI GCNNNNNNNGC 8 cut(s) 170, 254, 733, 787, 1648, 2202, 2282, 2674
HpyF3I CTNAG 9 cut(s) 50, 446, 737, 761, 782, 1577, 1763, 2403, 2544
HpySE526I ACGT 2 cut(s) 168, 2270
Hsp92I GRCGYC 2 cut(s) 916, 1264
HspAI GCGC 4 cut(s) 668, 1264, 1807, 1936
KasI GGCGCC 1 cut(s) 1263
Kpn2I TCCGGA 1 cut(s) 2631
KroI GCCGGC 1 cut(s) 1724
KroNI GCCGGC 1 cut(s) 1726
Ksp22I TGATCA 1 cut(s) 211
Kzo9I GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
LguI GCTCTTC 1 cut(s) 1371
LmnI GCTCC 4 cut(s) 551, 748, 1676, 2061
Lsp1109I GCAGC 5 cut(s) 1015, 1660, 1873, 1903, 2297
LweI GCATC 7 cut(s) 14, 84, 534, 1604, 1615, 1669, 1783
MaeI CTAG 9 cut(s) 617, 693, 897, 984, 1334, 1448, 1496, 2202, 2679
MaeII ACGT 2 cut(s) 168, 2270
MalI GATC 7 cut(s) 213, 654, 1845, 1965, 2190, 2235, 2400
MboI GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
MfeI CAATTG 2 cut(s) 1620, 2073
MflI RGATCY 4 cut(s) 1843, 1963, 2233, 2398
MhlI GDGCHC 3 cut(s) 208, 1578, 2058
MlsI TGGCCA 1 cut(s) 2212
MluNI TGGCCA 1 cut(s) 2212
Mly113I GGCGCC 1 cut(s) 1264
MlyI GAGTC 5 cut(s) 141, 233, 524, 956, 1880
MmeI TCCRAC 3 cut(s) 670, 947, 1009
Mox20I TGGCCA 1 cut(s) 2212
Mph1103I ATGCAT 1 cut(s) 1776
MroI TCCGGA 1 cut(s) 2631
MroNI GCCGGC 1 cut(s) 1724
MroXI GAANNNNTTC 1 cut(s) 1953
MscI TGGCCA 1 cut(s) 2212
MseI TTAA 7 cut(s) 71, 186, 603, 1220, 1292, 2100, 2624
MslI CAYNNNNRTG 2 cut(s) 219, 560
Msp20I TGGCCA 1 cut(s) 2212
MspA1I CMGCKG 2 cut(s) 722, 2537
MspCI CTTAAG 1 cut(s) 70
MspI CCGG 8 cut(s) 1163, 1504, 1725, 1857, 2228, 2375, 2489, 2632
MspR9I CCNGG 6 cut(s) 452, 549, 1164, 2155, 2375, 2691
MunI CAATTG 2 cut(s) 1620, 2073
MvaI CCWGG 4 cut(s) 452, 549, 2155, 2691
MvnI CGCG 1 cut(s) 668
MwoI GCNNNNNNNGC 8 cut(s) 170, 254, 733, 787, 1648, 2202, 2282, 2674
NaeI GCCGGC 1 cut(s) 1726
NarI GGCGCC 1 cut(s) 1264
NciI CCSGG 2 cut(s) 1164, 2375
NdeI CATATG 1 cut(s) 2063
NdeII GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
NgoMIV GCCGGC 1 cut(s) 1724
NheI GCTAGC 1 cut(s) 2201
NlaIV GGNNCC 5 cut(s) 553, 644, 1265, 2057, 2400
NmeAIII GCCGAG 2 cut(s) 2454, 2456
NmuCI GTSAC 3 cut(s) 271, 948, 2128
NsiI ATGCAT 1 cut(s) 1776
NspI RCATGY 2 cut(s) 1408, 2186
NspV TTCGAA 1 cut(s) 279
PaeR7I CTCGAG 1 cut(s) 1307
PciSI GCTCTTC 1 cut(s) 1371
PdiI GCCGGC 1 cut(s) 1726
PdmI GAANNNNTTC 1 cut(s) 1953
PfeI GAWTC 7 cut(s) 181, 478, 678, 754, 1133, 1361, 1589
PflFI GACNNNGTC 1 cut(s) 903
PflMI CCANNNNNTGG 1 cut(s) 2262
PkrI GCNGC 5 cut(s) 1005, 1650, 1888, 1918, 2287
PleI GAGTC 5 cut(s) 140, 233, 524, 955, 1879
PluTI GGCGCC 1 cut(s) 1267
PpsI GAGTC 5 cut(s) 140, 233, 524, 955, 1879
PshAI GACNNNNGTC 1 cut(s) 1998
Psp124BI GAGCTC 1 cut(s) 1578
Psp6I CCWGG 4 cut(s) 450, 547, 2153, 2689
PspFI CCCAGC 3 cut(s) 722, 1158, 2648
PspGI CCWGG 4 cut(s) 450, 547, 2153, 2689
PspN4I GGNNCC 5 cut(s) 553, 644, 1265, 2057, 2400
PspPI GGNCC 3 cut(s) 643, 1352, 1834
PspXI VCTCGAGB 1 cut(s) 1307
PstI CTGCAG 3 cut(s) 271, 1087, 1963
PstNI CAGNNNCTG 2 cut(s) 2141, 2690
PsuI RGATCY 4 cut(s) 1843, 1963, 2233, 2398
PsyI GACNNNGTC 1 cut(s) 903
PvuII CAGCTG 2 cut(s) 722, 2537
RsaI GTAC 8 cut(s) 393, 412, 857, 1989, 2159, 2411, 2453, 2501
RsaNI GTAC 8 cut(s) 392, 411, 856, 1988, 2158, 2410, 2452, 2500
RseI CAYNNNNRTG 2 cut(s) 219, 560
SacI GAGCTC 1 cut(s) 1578
SalI GTCGAC 2 cut(s) 236, 335
SapI GCTCTTC 1 cut(s) 1371
SaqAI TTAA 7 cut(s) 71, 186, 603, 1220, 1292, 2100, 2624
SatI GCNGC 5 cut(s) 1004, 1649, 1887, 1917, 2286
Sau3AI GATC 7 cut(s) 211, 652, 1843, 1963, 2188, 2233, 2398
Sau96I GGNCC 3 cut(s) 643, 1352, 1834
ScaI AGTACT 2 cut(s) 412, 2411
SchI GAGTC 5 cut(s) 141, 233, 524, 956, 1880
ScrFI CCNGG 6 cut(s) 452, 549, 1164, 2155, 2375, 2691
SduI GDGCHC 3 cut(s) 208, 1578, 2058
SfaNI GCATC 7 cut(s) 14, 84, 534, 1604, 1615, 1669, 1783
SfcI CTRYAG 4 cut(s) 267, 398, 1083, 1959
SfoI GGCGCC 1 cut(s) 1265
Sfr274I CTCGAG 1 cut(s) 1307
SfuI TTCGAA 1 cut(s) 279
SinI GGWCC 2 cut(s) 643, 1352
SlaI CTCGAG 1 cut(s) 1307
SmiMI CAYNNNNRTG 2 cut(s) 219, 560
SmlI CTYRAG 4 cut(s) 70, 1307, 1356, 1370
SmoI CTYRAG 4 cut(s) 70, 1307, 1356, 1370
SsiI CCGC 4 cut(s) 173, 255, 1051, 2332
SspDI GGCGCC 1 cut(s) 1263
SspI AATATT 1 cut(s) 310
SspMI CTAG 9 cut(s) 617, 693, 897, 984, 1334, 1448, 1496, 2202, 2679
SstI GAGCTC 1 cut(s) 1578
StyD4I CCNGG 6 cut(s) 450, 547, 1162, 2153, 2373, 2689
StyI CCWWGG 1 cut(s) 871
TaaI ACNGT 6 cut(s) 301, 506, 562, 818, 1048, 2728
TaiI ACGT 2 cut(s) 171, 2273
TatI WGTACW 5 cut(s) 410, 855, 2409, 2451, 2499
TfiI GAWTC 7 cut(s) 181, 478, 678, 754, 1133, 1361, 1589
Tru1I TTAA 7 cut(s) 71, 186, 603, 1220, 1292, 2100, 2624
Tru9I TTAA 7 cut(s) 71, 186, 603, 1220, 1292, 2100, 2624
TscAI CASTG 8 cut(s) 276, 304, 567, 960, 1690, 1712, 2548, 2580
TseFI GTSAC 3 cut(s) 271, 948, 2128
TseI GCWGC 5 cut(s) 1003, 1648, 1886, 1916, 2285
Tsp45I GTSAC 3 cut(s) 271, 948, 2128
TspRI CASTG 8 cut(s) 276, 304, 567, 960, 1690, 1712, 2548, 2580
Tth111I GACNNNGTC 1 cut(s) 903
Van91I CCANNNNNTGG 1 cut(s) 2262
Vha464I CTTAAG 1 cut(s) 70
VpaK11BI GGWCC 2 cut(s) 643, 1352
XapI RAATTY 5 cut(s) 962, 1173, 1193, 1202, 2165
XbaI TCTAGA 1 cut(s) 1495
XceI RCATGY 2 cut(s) 1408, 2186
XcmI CCANNNNNNNNNTGG 1 cut(s) 1897
XhoI CTCGAG 1 cut(s) 1307
XmiI GTMKAC 3 cut(s) 237, 336, 1127
XmnI GAANNNNTTC 1 cut(s) 1953
XspI CTAG 9 cut(s) 617, 693, 897, 984, 1334, 1448, 1496, 2202, 2679
ZrmI AGTACT 2 cut(s) 412, 2411
Zsp2I ATGCAT 1 cut(s) 1776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.