Rroxscaffold_2G00100350

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
22209368 .. 22214177
4810 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00100350.1

Sequence Viewer

Length: 2445 bp
ATGGCTCTGGCTAAAGAGATCATGGGTTGTTCTATGATGGAGTTCAAGTCTTCTTTGTCATCTCCATTTTTGAACCAAAACAAGTTTTTGATCAGACCCAATTTGGTGAATCCTTCTAGGATGAGGAGGGATAATCTGGTGCATTTGAGGAAGGCTAAGAAGGGGGCTGTGGCTGCTATTAGTGAAGATTTGGTCAAAATTGTGCCTGTTTTCTCTGCAGCAGAGAAGCCTGTGAAGTTCAAGGTGAGAGCTGTGGTGACAGTTAGGAACAAGATCAAAGAGGATTTCAAAGAGGCCATTGCCAAACAGTTAGATGCTTTAACTGACAAAATTGGCAGAAATGTTGCTTTGGAGCTTGTCAGCACTGTGATTGACCCAAGAACAAAAGCAGCCAAGAAAAGCAGTGAAGGCGTTTTGAAGGATTGGTCAAAGAAATCAAATCTGAAAGCAGAGAGGGTCAATTACACAGCTGAGTTTGAGGTGGACTCCAATTTTGGAGTACCAGGAGCAATCACACCATATTTACCAAACCAGACTCCAGAGGGGCTCAAGGAACTGAGACAGAAAGAGCTGAAGAATCTTAGGGGTGATGGAAATGGAGTCAGAAAATTATCTGATAGGATCTATGACTATGCTTTTTATAATGACCTGGGGAACCCTGATAAGGGAATTGACCTTACTAGACCTATTCTTGGTGGTGAAAAATTCCATATCCTAGAAGATGCCGCACTGGCCGTCTTCCAACTGATACTGATGTGTTGCGTTACAGATATGCTAACCGAGAGCAGGGTTGAGAAGCCACTACCAATGTATGTACCCAGAGATGAACAGTTTGAGGAGTCAAAAATGGACACATTTTCTTTTGGGAGGCTGAAGGGAGTGCTACACAATTTGATCCCTTCCTTAATGTCAAGCTTCAAATCTGACAAAGACTTCCGTGGCTTTGCCGACATTGACAGCCTCTACAGCGAAGGCATCCTTCTCAAACTGGGTTTACAAGAAGAAATCCTAAAGAAACTCCCATTGCCAAAAATGGTCAGCAAATTCCAAGACTACAACCAAGGAATTCTCAAATACGACATCCCTCAAATTCTTAGCAAGGACAAGTTCAGTTGGCTGCGAGATGACGAATTTGCCCGCCAAGCAGTGGCAGGGGTTAACCCATTGAGTATTGAGAGACTTGAATCTTTCCCACCAGTGAGCAAACTTGATCCTGAGGTTTATGGTCCAGTAGAATCTGCACTCAAAGAAGAACACATTTTACCTCATCTCTATGGCATGACTGTTCAACAGGCGCTGGATGAGAACAAGCTGTACATAGTGGACTACCATGACGTTTACCTTCCATTTCTTGATCGCATTAATGCCTTAGATGGGCGCAAGTCCTATGCGACTCGCACCATTTTTTTCTCGACACCCAATGGATCTCTCAAGCCAGTTGCCATCGAGCTTAGCCTCCCACATGCTGGACCAAGTTCAAGGGCTAAGCGTGTTTTGACTCCTCCGGTTGATGCCACAACCACTTGGTTGTGGCGACTCGCCAAGGCTCACGTCTGTTCCAACGACGCCGGTGTCCACCAACTTGTGCATCATTGGTTACGTACCCATGCTACCCTGGAGCCATTCATATTGGCAGCACACAGACAGTTGAGTGCAATGCACCCAATTTACAAGCTTTTGGATCCTCATATGAGATATACCCTTGAAATCAATGCATTGGCCCGACAAAGCTTAATCAACGCGGATGGAGTCATTGAGTCGTGCTTCACTCCCGGCCGCTACGCCATGGAAATCAGTGCTGCTGCCTATAAAGATTGGCGCTTTGACACCCAAAGCCTTCCAGAGGATCTCATCCGCCGGGGAATGGCAGTGCCTGACCCAACACAACCCCATGGTGTGAAACTTGTGCTTGAAGATTACCCATATGGCAGTGATGGACTACTACTATGGGGAGCAATTGAAAACTTTGTCCGAACCTATGTTCAACATTATTACCCAGATTCGAGCCTAATCCGAAGTGACAGGGAGTTACAAGATTGGTACTCAGAGTCCATCAATGTAGGCCATGCTGATCTTTGCAATGAAACATGGTGGCCTTCACTCTCAACACCAGATGACCTTGTTTCAATCCTCAGCACCCTAATTTGGCTAGCCTCAGCTCAACATGCTGCACTTAATTTTGCACAATACCCCTATGGTGGGTATGTCCCGAATCGCCCACCATTGATGAGAAGATTAATCCCTGAAGAGTCTGACCCGGAATATGCTAACTTCTTAGCAGACCCACAAAAGGGTGCACTGAGCAAATTTGACATGGATGTGAACTCAGCTTTAGATGCTGAAGCAATTGCTGGCCGTCATGGACTGATGGTTGCGAACTTGCGGTGCAAGATGAATGATGTACAGAGGGATAGTGCAGTAGTGGTTGGTAGCAGCGGCCAATAA

Protein Analysis

814

Amino Acids

91.64

Weight (kDa)

6.6

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Lipoxygenase PF00305 182 - 775 1.9e-257 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 642
AasI GACNNNNNNGTC 1 cut(s) 1571
AccB7I CCANNNNNTGG 2 cut(s) 1147, 1466
AccII CGCG 1 cut(s) 1742
AciI CCGC 7 cut(s) 726, 1138, 1742, 1777, 1855, 2383, 2436
AclWI GGATC 7 cut(s) 629, 889, 1205, 1432, 1676, 1689, 1854
AcoI YGGCCR 4 cut(s) 732, 1774, 2353, 2437
AcsI RAATTY 6 cut(s) 704, 1043, 1065, 1089, 1130, 2306
AcuI CTGAAG 4 cut(s) 593, 893, 2265, 2361
AcyI GRCGYC 1 cut(s) 1566
AfaI GTAC 6 cut(s) 501, 816, 1316, 1603, 2042, 2403
AjiI CACGTC 1 cut(s) 1552
AjnI CCWGG 3 cut(s) 502, 648, 1614
Alw21I GWGCWC 1 cut(s) 2299
Alw26I GTCTC 2 cut(s) 553, 1171
Alw44I GTGCAC 1 cut(s) 2295
AlwI GGATC 7 cut(s) 629, 889, 1205, 1432, 1676, 1689, 1854
AlwNI CAGNNNCTG 2 cut(s) 1297, 1874
AoxI GGCC 8 cut(s) 294, 732, 1719, 1774, 2062, 2093, 2353, 2437
ApaLI GTGCAC 1 cut(s) 2295
ApeKI GCWGC 9 cut(s) 173, 218, 389, 1117, 1634, 1799, 1802, 2168, 2433
ApoI RAATTY 6 cut(s) 704, 1043, 1065, 1089, 1130, 2306
ArsI GACNNNNNNTTYG 2 cut(s) 476, 508
AseI ATTAAT 2 cut(s) 1362, 2237
AspLEI GCGC 3 cut(s) 1297, 1380, 1821
AspS9I GGNCC 3 cut(s) 1226, 1469, 1720
AsuC2I CCSGG 3 cut(s) 1773, 1859, 2258
AsuHPI GGTGA 5 cut(s) 118, 256, 268, 599, 710
AsuNHI GCTAGC 1 cut(s) 2149
AvaII GGWCC 2 cut(s) 1226, 1469
AxyI CCTNAGG 1 cut(s) 1215
BaeGI GKGCMC 1 cut(s) 2299
BaeI ACNNNNGTAYC 2 cut(s) 740, 773
BamHI GGATCC 1 cut(s) 1681
BanII GRGCYC 1 cut(s) 549
BbsI GAAGAC 2 cut(s) 42, 730
Bbv12I GWGCWC 1 cut(s) 2299
BbvCI CCTCAGC 2 cut(s) 2132, 2155
BbvI GCAGC 8 cut(s) 160, 230, 401, 1104, 1646, 1786, 1789, 2155
BccI CCATC 8 cut(s) 31, 584, 1367, 1451, 1739, 1928, 2060, 2362
BceAI ACGGC 2 cut(s) 719, 2340
BciT130I CCWGG 3 cut(s) 504, 650, 1616
BclI TGATCA 1 cut(s) 90
BcnI CCSGG 3 cut(s) 1773, 1859, 2258
BcoDI GTCTC 2 cut(s) 553, 1171
BfaI CTAG 4 cut(s) 117, 681, 716, 2150
BfmI CTRYAG 2 cut(s) 216, 964
BfoI RGCGCY 2 cut(s) 1298, 1822
BglI GCCNNNNNGGC 1 cut(s) 731
BlpI GCTNAGC 2 cut(s) 1451, 1485
Bme1390I CCNGG 6 cut(s) 504, 650, 1616, 1773, 1859, 2258
Bme18I GGWCC 2 cut(s) 1226, 1469
BmgBI CACGTC 1 cut(s) 1552
BmgT120I GGNCC 3 cut(s) 1226, 1469, 1720
BmiI GGNNCC 3 cut(s) 656, 1620, 1683
BmrFI CCNGG 6 cut(s) 504, 650, 1616, 1773, 1859, 2258
BmrI ACTGGG 1 cut(s) 998
BmsI GCATC 6 cut(s) 304, 712, 984, 1501, 1597, 2326
BmtI GCTAGC 1 cut(s) 2153
BmuI ACTGGG 1 cut(s) 998
BpiI GAAGAC 2 cut(s) 42, 730
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 2 cut(s) 522, 1637
Bpu10I CCTNAGC 2 cut(s) 2132, 2155
Bpu1102I GCTNAGC 2 cut(s) 1451, 1485
BpuEI CTTGAG 2 cut(s) 533, 1415
BpuMI CCSGG 3 cut(s) 1773, 1859, 2258
BsaAI YACGTR 1 cut(s) 1601
BsaHI GRCGYC 1 cut(s) 1566
BsaJI CCNNGG 8 cut(s) 649, 937, 1060, 1542, 1614, 1785, 1858, 1891
BsaWI WCCGGW 1 cut(s) 1504
BsaXI ACNNNNNCTCC 2 cut(s) 32, 62
Bse118I RCCGGY 1 cut(s) 1568
Bse1I ACTGG 5 cut(s) 735, 993, 1196, 1229, 1436
Bse21I CCTNAGG 1 cut(s) 1215
Bse3DI GCAATG 4 cut(s) 297, 1022, 1662, 2086
BseBI CCWGG 3 cut(s) 504, 650, 1616
BseDI CCNNGG 8 cut(s) 649, 937, 1060, 1542, 1614, 1785, 1858, 1891
BseGI GGATG 7 cut(s) 126, 975, 1080, 1306, 1750, 1851, 2323
BseMI GCAATG 4 cut(s) 297, 1022, 1662, 2086
BseMII CTCAG 8 cut(s) 462, 548, 1206, 2058, 2146, 2169, 2291, 2340
BseNI ACTGG 5 cut(s) 735, 993, 1196, 1229, 1436
BseRI GAGGAG 3 cut(s) 139, 851, 1491
BseSI GKGCMC 1 cut(s) 2299
BseX3I CGGCCG 1 cut(s) 1774
BseXI GCAGC 8 cut(s) 160, 230, 401, 1104, 1646, 1786, 1789, 2155
BsgI GTGCAG 3 cut(s) 1224, 2154, 2436
Bsh1236I CGCG 1 cut(s) 1742
Bsh1285I CGRYCG 1 cut(s) 1777
BshFI GGCC 8 cut(s) 296, 734, 1721, 1776, 2064, 2095, 2355, 2439
BsiEI CGRYCG 1 cut(s) 1777
BsiHKAI GWGCWC 1 cut(s) 2299
BsiSI CCGG 5 cut(s) 1505, 1569, 1773, 1858, 2258
BslFI GGGAC 1 cut(s) 2192
BsmAI GTCTC 2 cut(s) 553, 1171
BsmFI GGGAC 1 cut(s) 2192
BsnI GGCC 8 cut(s) 296, 734, 1721, 1776, 2064, 2095, 2355, 2439
Bsp1286I GDGCHC 2 cut(s) 549, 2299
Bsp1407I TGTACA 2 cut(s) 1314, 2401
Bsp1720I GCTNAGC 2 cut(s) 1451, 1485
Bsp19I CCATGG 2 cut(s) 1785, 1891
BspACI CCGC 7 cut(s) 726, 1138, 1742, 1777, 1855, 2383, 2436
BspANI GGCC 8 cut(s) 296, 734, 1721, 1776, 2064, 2095, 2355, 2439
BspCNI CTCAG 8 cut(s) 463, 549, 1207, 2057, 2145, 2168, 2292, 2339
BspFNI CGCG 1 cut(s) 1742
BspLI GGNNCC 3 cut(s) 656, 1620, 1683
BspMAI CTGCAG 1 cut(s) 220
BspOI GCTAGC 1 cut(s) 2153
BspPI GGATC 7 cut(s) 629, 889, 1205, 1432, 1676, 1689, 1854
BsrDI GCAATG 4 cut(s) 297, 1022, 1662, 2086
BsrFI RCCGGY 1 cut(s) 1568
BsrGI TGTACA 2 cut(s) 1314, 2401
BsrI ACTGG 5 cut(s) 735, 993, 1196, 1229, 1436
BssAI RCCGGY 1 cut(s) 1568
BssECI CCNNGG 8 cut(s) 649, 937, 1060, 1542, 1614, 1785, 1858, 1891
BssNI GRCGYC 1 cut(s) 1566
BssT1I CCWWGG 4 cut(s) 1060, 1542, 1785, 1891
Bst2UI CCWGG 3 cut(s) 504, 650, 1616
Bst4CI ACNGT 6 cut(s) 262, 309, 367, 831, 1285, 1647
Bst6I CTCTTC 1 cut(s) 2241
BstACI GRCGYC 1 cut(s) 1566
BstAUI TGTACA 2 cut(s) 1314, 2401
BstBAI YACGTR 1 cut(s) 1601
BstC8I GCNNGC 3 cut(s) 1138, 2151, 2353
BstDSI CCRYGG 3 cut(s) 937, 1785, 1891
BstENI CCTNNNNNAGG 1 cut(s) 1841
BstF5I GGATG 7 cut(s) 126, 975, 1080, 1306, 1750, 1851, 2323
BstFNI CGCG 1 cut(s) 1742
BstH2I RGCGCY 2 cut(s) 1298, 1822
BstHHI GCGC 3 cut(s) 1297, 1380, 1821
BstMAI GTCTC 2 cut(s) 553, 1171
BstMCI CGRYCG 1 cut(s) 1777
BstMWI GCNNNNNNNGC 7 cut(s) 173, 408, 731, 966, 1142, 2165, 2336
BstNI CCWGG 3 cut(s) 504, 650, 1616
BstNSI RCATGY 2 cut(s) 1466, 2168
BstSCI CCNGG 6 cut(s) 502, 648, 1614, 1771, 1857, 2256
BstSFI CTRYAG 2 cut(s) 216, 964
BstSLI GKGCMC 1 cut(s) 2299
BstSNI TACGTA 1 cut(s) 1601
BstUI CGCG 1 cut(s) 1742
BstV1I GCAGC 8 cut(s) 160, 230, 401, 1104, 1646, 1786, 1789, 2155
BstV2I GAAGAC 2 cut(s) 42, 730
BstX2I RGATCY 4 cut(s) 621, 1424, 1681, 1846
BstYI RGATCY 4 cut(s) 621, 1424, 1681, 1846
BstZI CGGCCG 1 cut(s) 1774
Bsu36I CCTNAGG 1 cut(s) 1215
BsuRI GGCC 8 cut(s) 296, 734, 1721, 1776, 2064, 2095, 2355, 2439
BtgI CCRYGG 3 cut(s) 937, 1785, 1891
BtrI CACGTC 1 cut(s) 1552
BtsCI GGATG 7 cut(s) 126, 975, 1080, 1306, 1750, 1851, 2323
BtsI GCAGTG 4 cut(s) 409, 1152, 1875, 1936
BtsIMutI CAGTG 9 cut(s) 363, 409, 728, 1152, 1203, 1801, 1875, 1936, 2297
Cac8I GCNNGC 3 cut(s) 1138, 2151, 2353
CaiI CAGNNNCTG 2 cut(s) 1297, 1874
CfoI GCGC 3 cut(s) 1297, 1380, 1821
Cfr10I RCCGGY 1 cut(s) 1568
Cfr13I GGNCC 3 cut(s) 1226, 1469, 1720
CseI GACGC 1 cut(s) 1574
Csp6I GTAC 6 cut(s) 500, 815, 1315, 1602, 2041, 2402
CviQI GTAC 6 cut(s) 500, 815, 1315, 1602, 2041, 2402
DrdI GACNNNNNNGTC 1 cut(s) 1571
DseDI GACNNNNNNGTC 1 cut(s) 1571
EaeI YGGCCR 4 cut(s) 732, 1774, 2353, 2437
EagI CGGCCG 1 cut(s) 1774
Eam1104I CTCTTC 1 cut(s) 2241
EarI CTCTTC 1 cut(s) 2241
EciI GGCGGA 1 cut(s) 1844
EclXI CGGCCG 1 cut(s) 1774
Eco105I TACGTA 1 cut(s) 1601
Eco130I CCWWGG 4 cut(s) 1060, 1542, 1785, 1891
Eco24I GRGCYC 1 cut(s) 549
Eco47I GGWCC 2 cut(s) 1226, 1469
Eco52I CGGCCG 1 cut(s) 1774
Eco57I CTGAAG 4 cut(s) 593, 893, 2265, 2361
Eco81I CCTNAGG 1 cut(s) 1215
EcoNI CCTNNNNNAGG 1 cut(s) 1841
EcoRI GAATTC 1 cut(s) 1065
EcoRII CCWGG 3 cut(s) 502, 648, 1614
EcoT14I CCWWGG 4 cut(s) 1060, 1542, 1785, 1891
EcoT22I ATGCAT 1 cut(s) 1717
EcoT38I GRGCYC 1 cut(s) 549
ErhI CCWWGG 4 cut(s) 1060, 1542, 1785, 1891
FalI AAGNNNNNCTT 2 cut(s) 963, 995
FaqI GGGAC 1 cut(s) 2192
FauI CCCGC 1 cut(s) 1145
FauNDI CATATG 2 cut(s) 1689, 1924
FbaI TGATCA 1 cut(s) 90
FokI GGATG 7 cut(s) 133, 962, 1067, 1313, 1757, 1838, 2330
FriOI GRGCYC 1 cut(s) 549
FspBI CTAG 4 cut(s) 117, 681, 716, 2150
GlaI GCGC 3 cut(s) 1296, 1379, 1820
GsuI CTGGAG 2 cut(s) 522, 1637
HaeII RGCGCY 2 cut(s) 1298, 1822
HaeIII GGCC 8 cut(s) 296, 734, 1721, 1776, 2064, 2095, 2355, 2439
HapII CCGG 5 cut(s) 1505, 1569, 1773, 1858, 2258
HgaI GACGC 1 cut(s) 1574
HhaI GCGC 3 cut(s) 1297, 1380, 1821
Hin1I GRCGYC 1 cut(s) 1566
Hin6I GCGC 3 cut(s) 1295, 1378, 1819
HinP1I GCGC 3 cut(s) 1295, 1378, 1819
HincII GTYRAC 1 cut(s) 1159
HindII GTYRAC 1 cut(s) 1159
HindIII AAGCTT 3 cut(s) 913, 1673, 1729
HpaI GTTAAC 1 cut(s) 1159
HpaII CCGG 5 cut(s) 1505, 1569, 1773, 1858, 2258
HphI GGTGA 5 cut(s) 118, 256, 268, 599, 710
Hpy166II GTNNAC 8 cut(s) 484, 995, 1159, 1324, 1339, 1576, 2297, 2323
Hpy188I TCNGA 9 cut(s) 95, 444, 605, 616, 925, 1973, 2015, 2047, 2254
Hpy188III TCNNGA 6 cut(s) 539, 1214, 1352, 1411, 1841, 2209
Hpy8I GTNNAC 8 cut(s) 484, 995, 1159, 1324, 1339, 1576, 2297, 2323
Hpy99I CGWCG 1 cut(s) 1568
HpyCH4III ACNGT 6 cut(s) 262, 309, 367, 831, 1285, 1647
HpyCH4IV ACGT 3 cut(s) 1335, 1551, 1600
HpyF10VI GCNNNNNNNGC 7 cut(s) 173, 408, 731, 966, 1142, 2165, 2336
HpySE526I ACGT 3 cut(s) 1335, 1551, 1600
Hsp92I GRCGYC 1 cut(s) 1566
HspAI GCGC 3 cut(s) 1295, 1378, 1819
Ksp22I TGATCA 1 cut(s) 90
KspAI GTTAAC 1 cut(s) 1159
LmnI GCTCC 4 cut(s) 352, 506, 1618, 1952
Lsp1109I GCAGC 8 cut(s) 160, 230, 401, 1104, 1646, 1786, 1789, 2155
LweI GCATC 6 cut(s) 304, 712, 984, 1501, 1597, 2326
MaeI CTAG 4 cut(s) 117, 681, 716, 2150
MaeII ACGT 3 cut(s) 1335, 1551, 1600
MaeIII GTNAC 5 cut(s) 256, 763, 1596, 2018, 2028
MfeI CAATTG 2 cut(s) 1956, 2346
MflI RGATCY 4 cut(s) 621, 1424, 1681, 1846
MhlI GDGCHC 2 cut(s) 549, 2299
MmeI TCCRAC 2 cut(s) 766, 1584
Mph1103I ATGCAT 1 cut(s) 1717
MseI TTAA 7 cut(s) 320, 905, 1158, 1362, 1733, 2175, 2237
MslI CAYNNNNRTG 2 cut(s) 1272, 2318
MspA1I CMGCKG 2 cut(s) 470, 2436
MspI CCGG 5 cut(s) 1505, 1569, 1773, 1858, 2258
MspR9I CCNGG 6 cut(s) 504, 650, 1616, 1773, 1859, 2258
MunI CAATTG 2 cut(s) 1956, 2346
MvaI CCWGG 3 cut(s) 504, 650, 1616
MvnI CGCG 1 cut(s) 1742
MwoI GCNNNNNNNGC 7 cut(s) 173, 408, 731, 966, 1142, 2165, 2336
NciI CCSGG 3 cut(s) 1773, 1859, 2258
NcoI CCATGG 2 cut(s) 1785, 1891
NdeI CATATG 2 cut(s) 1689, 1924
NheI GCTAGC 1 cut(s) 2149
NlaIV GGNNCC 3 cut(s) 656, 1620, 1683
NmuCI GTSAC 2 cut(s) 256, 2018
NsiI ATGCAT 1 cut(s) 1717
NspI RCATGY 2 cut(s) 1466, 2168
PfeI GAWTC 6 cut(s) 109, 577, 1184, 1235, 2000, 2212
PflMI CCANNNNNTGG 2 cut(s) 1147, 1466
Ppu21I YACGTR 1 cut(s) 1601
PshBI ATTAAT 2 cut(s) 1362, 2237
PsiI TTATAA 1 cut(s) 642
Psp6I CCWGG 3 cut(s) 502, 648, 1614
PspGI CCWGG 3 cut(s) 502, 648, 1614
PspN4I GGNNCC 3 cut(s) 656, 1620, 1683
PspPI GGNCC 3 cut(s) 1226, 1469, 1720
PsrI GAACNNNNNNTAC 4 cut(s) 1245, 1277, 1298, 1330
PstI CTGCAG 1 cut(s) 220
PstNI CAGNNNCTG 2 cut(s) 1297, 1874
PsuI RGATCY 4 cut(s) 621, 1424, 1681, 1846
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 6 cut(s) 501, 816, 1316, 1603, 2042, 2403
RsaNI GTAC 6 cut(s) 500, 815, 1315, 1602, 2041, 2402
RseI CAYNNNNRTG 2 cut(s) 1272, 2318
SaqAI TTAA 7 cut(s) 320, 905, 1158, 1362, 1733, 2175, 2237
Sau96I GGNCC 3 cut(s) 1226, 1469, 1720
ScrFI CCNGG 6 cut(s) 504, 650, 1616, 1773, 1859, 2258
SduI GDGCHC 2 cut(s) 549, 2299
SfaNI GCATC 6 cut(s) 304, 712, 984, 1501, 1597, 2326
SfcI CTRYAG 2 cut(s) 216, 964
SgrAI CRCCGGYG 1 cut(s) 1568
SinI GGWCC 2 cut(s) 1226, 1469
SmiMI CAYNNNNRTG 2 cut(s) 1272, 2318
SmlI CTYRAG 2 cut(s) 548, 1430
SmoI CTYRAG 2 cut(s) 548, 1430
SnaBI TACGTA 1 cut(s) 1601
SsiI CCGC 7 cut(s) 726, 1138, 1742, 1777, 1855, 2383, 2436
SspMI CTAG 4 cut(s) 117, 681, 716, 2150
StyD4I CCNGG 6 cut(s) 502, 648, 1614, 1771, 1857, 2256
StyI CCWWGG 4 cut(s) 1060, 1542, 1785, 1891
TaaI ACNGT 6 cut(s) 262, 309, 367, 831, 1285, 1647
TaiI ACGT 3 cut(s) 1338, 1554, 1603
TaqI TCGA 3 cut(s) 1412, 1446, 2003
TatI WGTACW 2 cut(s) 1314, 2401
TauI GCSGC 3 cut(s) 728, 1779, 2439
TfiI GAWTC 6 cut(s) 109, 577, 1184, 1235, 2000, 2212
Tru1I TTAA 7 cut(s) 320, 905, 1158, 1362, 1733, 2175, 2237
Tru9I TTAA 7 cut(s) 320, 905, 1158, 1362, 1733, 2175, 2237
TscAI CASTG 9 cut(s) 370, 409, 735, 1152, 1203, 1801, 1875, 1936, 2304
TseFI GTSAC 2 cut(s) 256, 2018
TseI GCWGC 9 cut(s) 173, 218, 389, 1117, 1634, 1799, 1802, 2168, 2433
Tsp45I GTSAC 2 cut(s) 256, 2018
TspDTI ATGAA 4 cut(s) 840, 1615, 2097, 2408
TspGWI ACGGA 1 cut(s) 926
TspRI CASTG 9 cut(s) 370, 409, 735, 1152, 1203, 1801, 1875, 1936, 2304
Van91I CCANNNNNTGG 2 cut(s) 1147, 1466
VneI GTGCAC 1 cut(s) 2295
VpaK11BI GGWCC 2 cut(s) 1226, 1469
VspI ATTAAT 2 cut(s) 1362, 2237
XagI CCTNNNNNAGG 1 cut(s) 1841
XapI RAATTY 6 cut(s) 704, 1043, 1065, 1089, 1130, 2306
XceI RCATGY 2 cut(s) 1466, 2168
XspI CTAG 4 cut(s) 117, 681, 716, 2150
Zsp2I ATGCAT 1 cut(s) 1717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.