RLG00000031573

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
6309093 .. 6312900
3808 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031573

Sequence Viewer

Length: 2553 bp
ATGGCATTTAGAATGGGCTCATGTTTGGTGGAAGCACCTGATTTCAATTCCCTCAGTTCAAAACCAGCATTCCTAATGATCCATAAGCTTTCTTCTGCCATTTTATTGTTTTCGACAAATAAGAGAAGTAGATTCCAGTTACAGAGGAGGAACAATATGGCAACAGTACCAGTGGCTCTTAATGCAGCAACCAATGGTGCTCTTTCTCATGTGGACATGGTGGCATCCTGTCTAGTTCCTGCTCCAGAAAAGCTCGAAGTGACTTTTGAACTCACTGCATTAGTCACTGTGAAGAAAATTCACCGGAAGTTACATGTCAATGACACAATGCTTCATTGGTTCCGCCATCAAAAACACAAAGATCACAAGGGTGTTGTAGTCCTACAGCTTGTTAGTGCTCAAACTGGTCCGAAAGGGAAGAAGCCAAAGCTAAGTGAGGAAGCTGTATTGTATTGGACAAAGAATCCAAAAATGGGTGATGATAAAAACACGTACCAAGTCAAGTTTGTGGTGGACTCAACATTTGGGATGCATGCAGGAGCAATTACAGTGAGTAACCGATATGACGAGGAGTTCTATTTGGATAGCATCAACATTCAAGGTGGTGTTCATTTTGCTTGCAACTCTTGGGTTCAACCGGATCAGAAGTCTAATGCCGGGAAAAGAATCTTCTTCTCTACTAAGGCATACTTAGCAATTTTCACCCACCCACACCCTAGACGTTGTCGAACTGGACGCCCTCCAACCAAGACAGATAAGACTATGGAGTCACCGATGAGCGAATTTGCTACAATCTATGTGCCAAGAGATGAAGAGTTTGAGCAGCCCAAACAAGAAGCTCTTGACGCGGGAAAGTTGAAAGGAATTGTCCAGAATATAATTCACACACTTTCAACAATTACCACTGATAGAAATGTCAATGGGTATCCAGACATCTATGGTCTGTTAACAGATTCGTCTTCGCCTAAATCCAAGACCCAGCCAGGAACTCAAATCTTGAACAAAGTCCAAGAATTCCTCAAATTTGATCCCCCAAAATTAAACTCTAGGGACACATATTGTTTGCCAGATGACCAATTTGGGCCCCAAAGCGTTGCAGGCATATACCCTCTAAGCATAGAAAGGCTCAAGGTTTTTCCACCAGTAAGCAAACTTGAACCCTCCATATATGGTCCTCAAGAATCAGCACTCAAGGAAGAACATATAATAGACCAACTAAATGGCATGTCTATACAACAGGCATTGGAAGAAAACAAGTTGTTCATACTAGACTACCATGACACTTTTCTTCCATTTCTCAACAAAATAAACGCTCTGGATTACCGAAAAGCTTATGCAACACGAACAATTTTTTTCCTAACATCAGTGGGAACTTTGAAGCCCATTGCCATTGAGCTAAGTCTTTCAGATTCAGCATCCAAGCAGGTTCTTACTCCTCCAATTGACGCTATGACAGGTTGGCTTTGGCAGCTTGTCAAGGCCCATGTATGCTCCAACGATGCCGGTGTTCACCAACTCGTTCATCACTGGTTGCGCACCCATGCTTGCATAGAACCATTTATAATAGCAGCTCACAGGCAATTGAGTGTTATGCACCCCATCTACAAGCTTGTCAAACCTCACTTGTGCTACACCTTGAAGGTAAACGCAATGGCCCGTAAGGATCTCATCAACGCCGGAGGGACAATCGAGTCCGATTTCACTCCTGCCAAATACTGCATGGAGTTCAGTTGTGCTGCTTATCGAGACTGGTGGCGCTTTGACCTCGAAGGCCTTCCTGCAGATCTCATTAGAAGAGGAATAGCTGTACCAGACCCAAGTCAAATCCATGGGCTAAGACTACTCATTGAAGACTACCCTTATGCAACAGATGGGCTCCTTATATGGTCCGCAATTGAGACGTTGGTTCAAACCTATGTCAATTACTACTACCCTAATGCAAGTTTGGTCACTTCAGATACTGAACTCCAATCCTGGTACAATGAGTCCATCAATTTGGGACATGCCGATCTACGTGACGCTAGCTGGTGGCGAAAACTCTCTACTCGGGAAGATATCATCTCCATTCTCACCACCATCATTTGGCTCACATCAGCGCAACACGCTGCACTGAACTTTGGGCAATACCCATATGGCGGGTATGTCCCAACCCGCCCCCCACACATGAAGAGACTAATTCCGAAAAACAATGACCTTGAGTATGCTTCTTTCATTAGGGATCCTCAGCAATACTTCATATCATCATTGCCGAGTTTATTTGAAGCAACGAAGTACATGGCTGTGATCGATATAATCTCGGCACATTCACCAGATGAAGAGTACATTGGGGAGAGAAAAGACTCGTCAAACTGGTCAGCTGACACTGAGATTAGTGAGGCATTTTATAAATTTTCAGTGGAGATGAAGAGGATTGAGAAAGAGATTGAACGAAGAAACGGGGATTCGAGTCTCCGGAATAGATGTGGGGCTGGGGTTTCACCATATGAGCTTCTCATGCCGAGCTCAGAACCTGGGGTAACTTGCAGAGGTGTTCCAAATAGTATGACAGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

851

Amino Acids

96.17

Weight (kDa)

7.88

Isoelectric Point (pI)

50.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 142 - 225 7.7e-06 PLAT/LH2 domain
Lipoxygenase PF00305 235 - 833 1.6e-251 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1562, 2385
AasI GACNNNNNNGTC 2 cut(s) 766, 1690
Acc16I TGCGCA 1 cut(s) 1535
Acc36I ACCTGC 1 cut(s) 1414
AccB7I CCANNNNNTGG 1 cut(s) 2082
AccII CGCG 1 cut(s) 848
AccIII TCCGGA 1 cut(s) 2451
AciI CCGC 5 cut(s) 343, 848, 1890, 2136, 2152
AclWI GGATC 6 cut(s) 73, 648, 1022, 1671, 2213, 2226
AcsI RAATTY 5 cut(s) 297, 782, 1013, 1022, 2387
AcuI CTGAAG 1 cut(s) 1938
AcyI GRCGYC 1 cut(s) 736
AfaI GTAC 6 cut(s) 168, 494, 1809, 1979, 2273, 2321
AfiI CCNNNNNNNGG 3 cut(s) 473, 2082, 2135
AflIII ACRYGT 2 cut(s) 313, 489
AjnI CCWGG 3 cut(s) 982, 1973, 2509
AjuI GAANNNNNNNTTGG 2 cut(s) 2307, 2339
AleI CACNNNNGTG 1 cut(s) 369
Alw21I GWGCWC 3 cut(s) 202, 400, 2504
Alw26I GTCTC 4 cut(s) 1740, 1892, 2164, 2453
AlwI GGATC 6 cut(s) 73, 648, 1022, 1671, 2213, 2226
AlwNI CAGNNNCTG 2 cut(s) 1961, 2510
Ama87I CYCGRG 1 cut(s) 2046
Aor13HI TCCGGA 1 cut(s) 2451
AoxI GGCC 4 cut(s) 1082, 1479, 1653, 1771
ApaI GGGCCC 1 cut(s) 1086
ApeKI GCWGC 6 cut(s) 185, 823, 1468, 1568, 1736, 2105
ApoI RAATTY 5 cut(s) 297, 782, 1013, 1022, 2387
ArsI GACNNNNNNTTYG 2 cut(s) 506, 538
Asp700I GAANNNNTTC 1 cut(s) 1773
AspLEI GCGC 3 cut(s) 1536, 1758, 2098
AspS9I GGNCC 7 cut(s) 407, 1082, 1083, 1172, 1480, 1654, 1887
AsuC2I CCSGG 1 cut(s) 658
AsuHPI GGTGA 8 cut(s) 293, 488, 694, 762, 1502, 2062, 2298, 2469
AsuNHI GCTAGC 1 cut(s) 2021
AvaI CYCGRG 1 cut(s) 2046
AvaII GGWCC 3 cut(s) 407, 1172, 1887
BaeGI GKGCMC 1 cut(s) 1086
BamHI GGATCC 1 cut(s) 2218
BanII GRGCYC 4 cut(s) 20, 1086, 1878, 2504
BbsI GAAGAC 2 cut(s) 951, 1857
Bbv12I GWGCWC 3 cut(s) 202, 400, 2504
BbvCI CCTCAGC 1 cut(s) 2223
BbvI GCAGC 6 cut(s) 197, 835, 1480, 1580, 1723, 2092
BccI CCATC 5 cut(s) 354, 1607, 1865, 1997, 2084
BciT130I CCWGG 3 cut(s) 984, 1975, 2511
BciVI GTATCC 1 cut(s) 936
BcnI CCSGG 1 cut(s) 658
BcoDI GTCTC 4 cut(s) 1740, 1892, 2164, 2453
BfaI CTAG 5 cut(s) 233, 717, 1047, 1268, 2022
BfmI CTRYAG 2 cut(s) 383, 1779
BfoI RGCGCY 1 cut(s) 1759
BfuAI ACCTGC 1 cut(s) 1414
BfuI GTATCC 1 cut(s) 936
BglII AGATCT 1 cut(s) 1783
BisI GCNGC 6 cut(s) 186, 824, 1469, 1569, 1737, 2106
BlsI GCNGC 6 cut(s) 187, 825, 1470, 1570, 1738, 2107
Bme1390I CCNGG 4 cut(s) 658, 984, 1975, 2511
Bme18I GGWCC 3 cut(s) 407, 1172, 1887
BmeT110I CYCGRG 1 cut(s) 2046
BmgT120I GGNCC 7 cut(s) 407, 1082, 1083, 1172, 1480, 1654, 1887
BmiI GGNNCC 5 cut(s) 341, 1084, 1085, 1877, 2220
BmrFI CCNGG 4 cut(s) 658, 984, 1975, 2511
BmsI GCATC 5 cut(s) 233, 519, 597, 1424, 1489
BmtI GCTAGC 1 cut(s) 2025
BoxI GACNNNNGTC 1 cut(s) 1818
BpiI GAAGAC 2 cut(s) 951, 1857
BpmI CTGGAG 1 cut(s) 228
Bpu10I CCTNAGC 1 cut(s) 2223
BpuEI CTTGAG 4 cut(s) 1112, 1161, 1175, 2216
BpuMI CCSGG 1 cut(s) 658
Bsa29I ATCGAT 1 cut(s) 2286
BsaAI YACGTR 2 cut(s) 492, 2015
BsaHI GRCGYC 1 cut(s) 736
BsaJI CCNNGG 2 cut(s) 1828, 2510
BsaWI WCCGGW 3 cut(s) 303, 637, 2451
Bsc4I CCNNNNNNNGG 3 cut(s) 473, 2082, 2135
Bse118I RCCGGY 1 cut(s) 1502
Bse1I ACTGG 8 cut(s) 136, 170, 409, 736, 1142, 1532, 1754, 2354
Bse3DI GCAATG 3 cut(s) 1383, 1656, 2243
BseAI TCCGGA 1 cut(s) 2451
BseBI CCWGG 3 cut(s) 984, 1975, 2511
BseCI ATCGAT 1 cut(s) 2286
BseDI CCNNGG 2 cut(s) 1828, 2510
BseGI GGATG 3 cut(s) 224, 534, 1415
BseLI CCNNNNNNNGG 3 cut(s) 473, 2082, 2135
BseMI GCAATG 3 cut(s) 1383, 1656, 2243
BseMII CTCAG 4 cut(s) 67, 2237, 2355, 2517
BseNI ACTGG 8 cut(s) 136, 170, 409, 736, 1142, 1532, 1754, 2354
BseRI GAGGAG 3 cut(s) 160, 584, 1425
BseSI GKGCMC 1 cut(s) 1086
BseXI GCAGC 6 cut(s) 197, 835, 1480, 1580, 1723, 2092
BseYI CCCAGC 2 cut(s) 978, 2468
BsgI GTGCAG 1 cut(s) 2091
Bsh1236I CGCG 1 cut(s) 848
BshFI GGCC 4 cut(s) 1084, 1481, 1655, 1773
BshVI ATCGAT 1 cut(s) 2286
BsiHKAI GWGCWC 3 cut(s) 202, 400, 2504
BsiHKCI CYCGRG 1 cut(s) 2046
BsiSI CCGG 6 cut(s) 304, 638, 657, 1503, 1677, 2452
BslFI GGGAC 4 cut(s) 1064, 1696, 2013, 2129
BslI CCNNNNNNNGG 3 cut(s) 473, 2082, 2135
BsmAI GTCTC 4 cut(s) 1740, 1892, 2164, 2453
BsmBI CGTCTC 1 cut(s) 1892
BsmFI GGGAC 4 cut(s) 1064, 1696, 2013, 2129
BsmI GAATGC 1 cut(s) 68
BsnI GGCC 4 cut(s) 1084, 1481, 1655, 1773
BsoBI CYCGRG 1 cut(s) 2046
Bsp120I GGGCCC 1 cut(s) 1082
Bsp1286I GDGCHC 6 cut(s) 20, 202, 400, 1086, 1878, 2504
Bsp13I TCCGGA 1 cut(s) 2451
Bsp143I GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
Bsp19I CCATGG 1 cut(s) 1828
BspACI CCGC 5 cut(s) 343, 848, 1890, 2136, 2152
BspANI GGCC 4 cut(s) 1084, 1481, 1655, 1773
BspCNI CTCAG 4 cut(s) 66, 2236, 2356, 2516
BspDI ATCGAT 1 cut(s) 2286
BspEI TCCGGA 1 cut(s) 2451
BspFNI CGCG 1 cut(s) 848
BspLI GGNNCC 5 cut(s) 341, 1084, 1085, 1877, 2220
BspMAI CTGCAG 1 cut(s) 1783
BspMI ACCTGC 1 cut(s) 1414
BspOI GCTAGC 1 cut(s) 2025
BspPI GGATC 6 cut(s) 73, 648, 1022, 1671, 2213, 2226
BsrDI GCAATG 3 cut(s) 1383, 1656, 2243
BsrFI RCCGGY 1 cut(s) 1502
BsrI ACTGG 8 cut(s) 136, 170, 409, 736, 1142, 1532, 1754, 2354
BssAI RCCGGY 1 cut(s) 1502
BssECI CCNNGG 2 cut(s) 1828, 2510
BssMI GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
BssNI GRCGYC 1 cut(s) 736
BssT1I CCWWGG 1 cut(s) 1828
Bst2UI CCWGG 3 cut(s) 984, 1975, 2511
Bst4CI ACNGT 4 cut(s) 166, 289, 550, 2548
Bst6I CTCTTC 5 cut(s) 807, 1789, 2162, 2310, 2399
BstACI GRCGYC 1 cut(s) 736
BstBAI YACGTR 2 cut(s) 492, 2015
BstC8I GCNNGC 5 cut(s) 534, 619, 1099, 1546, 2023
BstDSI CCRYGG 1 cut(s) 1828
BstF5I GGATG 3 cut(s) 224, 534, 1415
BstFNI CGCG 1 cut(s) 848
BstH2I RGCGCY 1 cut(s) 1759
BstHHI GCGC 3 cut(s) 1536, 1758, 2098
BstKTI GATC 9 cut(s) 81, 364, 643, 1030, 1666, 1786, 2011, 2221, 2286
BstMAI GTCTC 4 cut(s) 1740, 1892, 2164, 2453
BstMBI GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
BstMWI GCNNNNNNNGC 7 cut(s) 182, 692, 845, 1098, 1468, 2102, 2494
BstNI CCWGG 3 cut(s) 984, 1975, 2511
BstNSI RCATGY 4 cut(s) 317, 536, 1228, 2006
BstPAI GACNNNNGTC 1 cut(s) 1818
BstSCI CCNGG 4 cut(s) 656, 982, 1973, 2509
BstSFI CTRYAG 2 cut(s) 383, 1779
BstSLI GKGCMC 1 cut(s) 1086
BstUI CGCG 1 cut(s) 848
BstV1I GCAGC 6 cut(s) 197, 835, 1480, 1580, 1723, 2092
BstV2I GAAGAC 2 cut(s) 951, 1857
BstX2I RGATCY 3 cut(s) 1663, 1783, 2218
BstXI CCANNNNNNTGG 2 cut(s) 1220, 1996
BstYI RGATCY 3 cut(s) 1663, 1783, 2218
Bsu15I ATCGAT 1 cut(s) 2286
BsuI GTATCC 1 cut(s) 936
BsuRI GGCC 4 cut(s) 1084, 1481, 1655, 1773
BsuTUI ATCGAT 1 cut(s) 2286
BtgI CCRYGG 1 cut(s) 1828
BtsCI GGATG 3 cut(s) 224, 534, 1415
BtsI GCAGTG 1 cut(s) 273
BveI ACCTGC 1 cut(s) 1414
Cac8I GCNNGC 5 cut(s) 534, 619, 1099, 1546, 2023
CaiI CAGNNNCTG 2 cut(s) 1961, 2510
CfoI GCGC 3 cut(s) 1536, 1758, 2098
Cfr10I RCCGGY 1 cut(s) 1502
Cfr13I GGNCC 7 cut(s) 407, 1082, 1083, 1172, 1480, 1654, 1887
ClaI ATCGAT 1 cut(s) 2286
CseI GACGC 4 cut(s) 744, 854, 1454, 2027
Csp6I GTAC 6 cut(s) 167, 493, 1808, 1978, 2272, 2320
CviQI GTAC 6 cut(s) 167, 493, 1808, 1978, 2272, 2320
DpnI GATC 9 cut(s) 80, 363, 642, 1029, 1665, 1785, 2010, 2220, 2285
DpnII GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
DrdI GACNNNNNNGTC 2 cut(s) 766, 1690
DseDI GACNNNNNNGTC 2 cut(s) 766, 1690
Eam1104I CTCTTC 5 cut(s) 807, 1789, 2162, 2310, 2399
EarI CTCTTC 5 cut(s) 807, 1789, 2162, 2310, 2399
EciI GGCGGA 1 cut(s) 332
Ecl136II GAGCTC 1 cut(s) 2502
Eco130I CCWWGG 1 cut(s) 1828
Eco147I AGGCCT 1 cut(s) 1773
Eco24I GRGCYC 4 cut(s) 20, 1086, 1878, 2504
Eco32I GATATC 1 cut(s) 2056
Eco47I GGWCC 3 cut(s) 407, 1172, 1887
Eco53kI GAGCTC 1 cut(s) 2502
Eco57I CTGAAG 1 cut(s) 1938
Eco88I CYCGRG 1 cut(s) 2046
EcoICRI GAGCTC 1 cut(s) 2502
EcoO109I RGGNCCY 1 cut(s) 1083
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 3 cut(s) 982, 1973, 2509
EcoRV GATATC 1 cut(s) 2056
EcoT14I CCWWGG 1 cut(s) 1828
EcoT22I ATGCAT 1 cut(s) 534
EcoT38I GRGCYC 4 cut(s) 20, 1086, 1878, 2504
ErhI CCWWGG 1 cut(s) 1828
Esp3I CGTCTC 1 cut(s) 1892
FalI AAGNNNNNCTT 4 cut(s) 674, 706, 825, 857
FaqI GGGAC 4 cut(s) 1064, 1696, 2013, 2129
FauI CCCGC 3 cut(s) 841, 2129, 2159
FauNDI CATATG 2 cut(s) 2131, 2482
Fnu4HI GCNGC 6 cut(s) 186, 824, 1469, 1569, 1737, 2106
FokI GGATG 3 cut(s) 211, 541, 1402
FriOI GRGCYC 4 cut(s) 20, 1086, 1878, 2504
Fsp4HI GCNGC 6 cut(s) 186, 824, 1469, 1569, 1737, 2106
FspBI CTAG 5 cut(s) 233, 717, 1047, 1268, 2022
FspI TGCGCA 1 cut(s) 1535
GlaI GCGC 3 cut(s) 1535, 1757, 2097
GluI GCNGC 6 cut(s) 186, 824, 1469, 1569, 1737, 2106
GsaI CCCAGC 2 cut(s) 982, 2472
GsuI CTGGAG 1 cut(s) 228
HaeII RGCGCY 1 cut(s) 1759
HaeIII GGCC 4 cut(s) 1084, 1481, 1655, 1773
HapII CCGG 6 cut(s) 304, 638, 657, 1503, 1677, 2452
HgaI GACGC 4 cut(s) 744, 854, 1454, 2027
HhaI GCGC 3 cut(s) 1536, 1758, 2098
Hin1I GRCGYC 1 cut(s) 736
Hin6I GCGC 3 cut(s) 1534, 1756, 2096
HinP1I GCGC 3 cut(s) 1534, 1756, 2096
HincII GTYRAC 1 cut(s) 948
HindII GTYRAC 1 cut(s) 948
HindIII AAGCTT 3 cut(s) 86, 1329, 1607
HpaI GTTAAC 1 cut(s) 948
HpaII CCGG 6 cut(s) 304, 638, 657, 1503, 1677, 2452
HphI GGTGA 8 cut(s) 293, 488, 694, 762, 1502, 2062, 2298, 2469
Hpy166II GTNNAC 5 cut(s) 214, 514, 948, 1510, 1645
Hpy188I TCNGA 7 cut(s) 411, 645, 1408, 1696, 1957, 2181, 2506
Hpy8I GTNNAC 5 cut(s) 214, 514, 948, 1510, 1645
HpyAV CCTTC 3 cut(s) 1633, 1763, 1784
HpyCH4III ACNGT 4 cut(s) 166, 289, 550, 2548
HpyCH4IV ACGT 4 cut(s) 491, 721, 1901, 2014
HpyF10VI GCNNNNNNNGC 7 cut(s) 182, 692, 845, 1098, 1468, 2102, 2494
HpySE526I ACGT 4 cut(s) 491, 721, 1901, 2014
Hsp92I GRCGYC 1 cut(s) 736
HspAI GCGC 3 cut(s) 1534, 1756, 2096
Kpn2I TCCGGA 1 cut(s) 2451
KspAI GTTAAC 1 cut(s) 948
Kzo9I GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
LmnI GCTCC 4 cut(s) 247, 539, 1496, 1881
Lsp1109I GCAGC 6 cut(s) 197, 835, 1480, 1580, 1723, 2092
LweI GCATC 5 cut(s) 233, 519, 597, 1424, 1489
MaeI CTAG 5 cut(s) 233, 717, 1047, 1268, 2022
MaeII ACGT 4 cut(s) 491, 721, 1901, 2014
MaeIII GTNAC 9 cut(s) 138, 259, 283, 309, 554, 768, 1948, 2015, 2515
MalI GATC 9 cut(s) 80, 363, 642, 1029, 1665, 1785, 2010, 2220, 2285
MboI GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
MfeI CAATTG 3 cut(s) 1440, 1580, 1893
MflI RGATCY 3 cut(s) 1663, 1783, 2218
MhlI GDGCHC 6 cut(s) 20, 202, 400, 1086, 1878, 2504
MlyI GAGTC 6 cut(s) 509, 776, 1700, 1994, 2333, 2455
MmeI TCCRAC 2 cut(s) 767, 1518
Mph1103I ATGCAT 1 cut(s) 534
MroI TCCGGA 1 cut(s) 2451
MroXI GAANNNNTTC 1 cut(s) 1773
MseI TTAA 3 cut(s) 180, 947, 1040
MslI CAYNNNNRTG 3 cut(s) 318, 369, 2279
MspA1I CMGCKG 1 cut(s) 2357
MspI CCGG 6 cut(s) 304, 638, 657, 1503, 1677, 2452
MspR9I CCNGG 4 cut(s) 658, 984, 1975, 2511
MunI CAATTG 3 cut(s) 1440, 1580, 1893
Mva1269I GAATGC 1 cut(s) 68
MvaI CCWGG 3 cut(s) 984, 1975, 2511
MvnI CGCG 1 cut(s) 848
MwoI GCNNNNNNNGC 7 cut(s) 182, 692, 845, 1098, 1468, 2102, 2494
NciI CCSGG 1 cut(s) 658
NcoI CCATGG 1 cut(s) 1828
NdeI CATATG 2 cut(s) 2131, 2482
NdeII GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
NheI GCTAGC 1 cut(s) 2021
NlaIV GGNNCC 5 cut(s) 341, 1084, 1085, 1877, 2220
NmeAIII GCCGAG 3 cut(s) 2274, 2276, 2523
NmuCI GTSAC 5 cut(s) 259, 283, 768, 1948, 2015
NsbI TGCGCA 1 cut(s) 1535
NsiI ATGCAT 1 cut(s) 534
NspI RCATGY 4 cut(s) 317, 536, 1228, 2006
OliI CACNNNNGTG 1 cut(s) 369
PaeI GCATGC 1 cut(s) 536
PceI AGGCCT 1 cut(s) 1773
PciI ACATGT 1 cut(s) 313
PctI GAATGC 1 cut(s) 68
PdmI GAANNNNTTC 1 cut(s) 1773
PfeI GAWTC 7 cut(s) 132, 463, 666, 953, 1181, 1409, 2441
PflFI GACNNNGTC 1 cut(s) 723
PflMI CCANNNNNTGG 1 cut(s) 2082
PkrI GCNGC 6 cut(s) 187, 825, 1470, 1570, 1738, 2107
PleI GAGTC 6 cut(s) 509, 775, 1699, 1993, 2333, 2454
PpsI GAGTC 6 cut(s) 509, 775, 1699, 1993, 2333, 2454
Ppu21I YACGTR 2 cut(s) 492, 2015
PscI ACATGT 1 cut(s) 313
PshAI GACNNNNGTC 1 cut(s) 1818
PsiI TTATAA 2 cut(s) 1562, 2385
Psp124BI GAGCTC 1 cut(s) 2504
Psp6I CCWGG 3 cut(s) 982, 1973, 2509
PspFI CCCAGC 2 cut(s) 978, 2468
PspGI CCWGG 3 cut(s) 982, 1973, 2509
PspN4I GGNNCC 5 cut(s) 341, 1084, 1085, 1877, 2220
PspOMI GGGCCC 1 cut(s) 1082
PspPI GGNCC 7 cut(s) 407, 1082, 1083, 1172, 1480, 1654, 1887
PstI CTGCAG 1 cut(s) 1783
PstNI CAGNNNCTG 2 cut(s) 1961, 2510
PsuI RGATCY 3 cut(s) 1663, 1783, 2218
PsyI GACNNNGTC 1 cut(s) 723
PvuII CAGCTG 1 cut(s) 2357
RsaI GTAC 6 cut(s) 168, 494, 1809, 1979, 2273, 2321
RsaNI GTAC 6 cut(s) 167, 493, 1808, 1978, 2272, 2320
RseI CAYNNNNRTG 3 cut(s) 318, 369, 2279
SacI GAGCTC 1 cut(s) 2504
SaqAI TTAA 3 cut(s) 180, 947, 1040
SatI GCNGC 6 cut(s) 186, 824, 1469, 1569, 1737, 2106
Sau3AI GATC 9 cut(s) 78, 361, 640, 1027, 1663, 1783, 2008, 2218, 2283
Sau96I GGNCC 7 cut(s) 407, 1082, 1083, 1172, 1480, 1654, 1887
SchI GAGTC 6 cut(s) 509, 776, 1700, 1994, 2333, 2455
ScrFI CCNGG 4 cut(s) 658, 984, 1975, 2511
SduI GDGCHC 6 cut(s) 20, 202, 400, 1086, 1878, 2504
SfaNI GCATC 5 cut(s) 233, 519, 597, 1424, 1489
SfcI CTRYAG 2 cut(s) 383, 1779
SinI GGWCC 3 cut(s) 407, 1172, 1887
SmiMI CAYNNNNRTG 3 cut(s) 318, 369, 2279
SmlI CTYRAG 4 cut(s) 1127, 1176, 1190, 2195
SmoI CTYRAG 4 cut(s) 1127, 1176, 1190, 2195
SphI GCATGC 1 cut(s) 536
SseBI AGGCCT 1 cut(s) 1773
SsiI CCGC 5 cut(s) 343, 848, 1890, 2136, 2152
SspMI CTAG 5 cut(s) 233, 717, 1047, 1268, 2022
SstI GAGCTC 1 cut(s) 2504
StuI AGGCCT 1 cut(s) 1773
StyD4I CCNGG 4 cut(s) 656, 982, 1973, 2509
StyI CCWWGG 1 cut(s) 1828
TaaI ACNGT 4 cut(s) 166, 289, 550, 2548
TaiI ACGT 4 cut(s) 494, 724, 1904, 2017
TaqI TCGA 8 cut(s) 113, 255, 727, 1689, 1744, 1767, 2286, 2444
TatI WGTACW 2 cut(s) 2271, 2319
TfiI GAWTC 7 cut(s) 132, 463, 666, 953, 1181, 1409, 2441
Tru1I TTAA 3 cut(s) 180, 947, 1040
Tru9I TTAA 3 cut(s) 180, 947, 1040
TseFI GTSAC 5 cut(s) 259, 283, 768, 1948, 2015
TseI GCWGC 6 cut(s) 185, 823, 1468, 1568, 1736, 2105
Tsp45I GTSAC 5 cut(s) 259, 283, 768, 1948, 2015
Tth111I GACNNNGTC 1 cut(s) 723
Van91I CCANNNNNTGG 1 cut(s) 2082
VpaK11BI GGWCC 3 cut(s) 407, 1172, 1887
XapI RAATTY 5 cut(s) 297, 782, 1013, 1022, 2387
XceI RCATGY 4 cut(s) 317, 536, 1228, 2006
XcmI CCANNNNNNNNNTGG 1 cut(s) 1717
XmnI GAANNNNTTC 1 cut(s) 1773
XspI CTAG 5 cut(s) 233, 717, 1047, 1268, 2022
Zsp2I ATGCAT 1 cut(s) 534
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.