Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000650

Physical Location & Seq

Genomic Coordinates Reverse (-)

27621107 .. 27625791

Gene Structure 4685 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g34970.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2745 bp

ATGGCTCTGGCTAAAGAGATCATGGGTTGTTCTATGATGGACTTCAAGTCTTCTTCATCATCTCCATTTTTTAATCAGAACAAGTTTTTGATCGGGCCCAGTTTGGTGAACCCTTCTAGGATGAGGAGGGATAGTCTGGTGCATTTGAGGAAGGCTAAGAAGGGAGCTGTGGCTGCAATCAGTGAAGATTTGGTCAAAATTGTGCCTATTTTCTCTGCAGCAGAGAAGCCTGTCAAGTTCAAGGTTAGAGCTGTGGTGACAGTTAGGAACAAGATTAAAGAGGATTTCAAAGAGGCTTTTGCCAAACAGTTGGATGCTCTAACTGACAAGATTGGCAGAAATGTTGCTTTGGAGCTTGTCAGCACTCAGATTGACCCAAAAACAAGAAAAGCCAAGAAAAGCAGTGAAGGGGTTTTGAAGGATTGGTCAAAGAAATCAAATCTAAAAGCAGAGAGGGTGAACTACACAGCTGAGTTTGAGGTGGACTCCAATTTTGGAGTACCAGGAGCAATCACAGTAACTAATAAGCATCAAACAGAGTTCTTTTTGGAGACGATAACCATCGAAGGTTTCGCCTGCGGTCCATTGCATTTCCCTTGCAACTCCTGGATGCAACCCAAGAAAGATCACCCAGAAAAGAGAATTGTCTTCTGCAACAAGCCATTTTTACCAAACCAGACTCCAGAGGGGCTCAAGGAACTAAGACAGAAAGAGCTGAAGAATCTCAGGGGTGATGGAAATGGAGTTAGAAAATTATCAGACAGGATCTATGACTATGCTTTGTATAATGACCTGGGAAACCCTGATAAGGGAATTGACCTTACTAGGCCTACTCTTGGTGGTCCAAAAATTCCATATCCTAGAAGATGTCGCACCGGCCGTCTTCCAACTGATACTGATATGCTGTCCGAGAGCAGAGTTGAGAAGCCAAAACCAATGTACGTACCGAGAGATGAACAATTTGAGGAGTCAAAAATGGACACATTTTCTTTTGGGAGGCTAAAGGGAGTGCTCCACAACCTGCTCCCTTCCTTGATGTCAAGCTTCAAATCAGACAAAGACTTCCGTGGCTTTGCCGACATTGACAGCCTCTACAGCGAAGGCGTCCTTCTCAAACTTGGGGTACAAGAAGAACTCCTTAAGAAATTCCCATTGCCAAAAATGGTCAGCAAATTCCAAGACTACAACCAAGGAATTCTCAAATACGACATCCCTCATATTCTTAGCAAGGACAAGTTCAGTTGGCTGCGAGATGACGAATTTGCCCGTCAAGCAGTGGCAGGGGTAAACCCATTGAGTATAGAGAGACTTGAATCTTTCCCACCAGTGAGCAAACTTGATCCTGAAGTTTATGGTCCTGTAGAATCTGCACTCAAAGAAGAACATATTTTACCTCATCTCTATGGCATGACTGTTCAACAGGCAATTGATGAGAACAAGCTGTACATAGTGGACTATCATGACGTTTACCTTCCATTTCTTGATCGCATTAATGCCTTAGATGGTCGCAAGTCCTACGCGACTCGCACCATTTTTTACTTGACACCCAATGGATCTCTCATGCCAGTTGCCATTGAGCTTAGTCTCCCACAGGCTGGACCAAGTTCAAGAGCTAAGCGTGTTTTGACTCCTCCGGTCGACGCCACAACCACTTGGTTGTGGCGACTCGCCAAGGCTCACGTCTGTTCCAACGACGCCGGTGTCCACCAACTTGTGCACCATTGGTTACGTACCCATGCTACCTTGGAGCCATTCATATTGGCAGCACATAGACAGTTGAGTGCAATGCACCCAATTTACAAGCTTTTGGATCCTCATATGAGATATACCCTAGAGATCAATGCATTGGCCCGACAAAGTTTAGTCAATGCCGATGGAGTCATTGAGTCGTGCTTCACTCCCGGCCGCTATGCCATGGAAATCAGCGCCTCCGCCTACAAAGGTTGGCGCTTTGACACCCAAAGCCTTCCAGCAGATCTCATTTGCCGGGGAATGGCAGTACCTGACCCAACACAACCCCATGGTGTGAAACTTGTGATAGAAGATTACCCATATGGCAGTGATGGACTACTAATATGGGGAGCGATTGAAAACTTTGTCCGAACCTATGTTCAACATTATTACGCAGATTCGAGCTCAATACGAAATGATAGGGAGTTACAAGATTGGTACTCAGAGTCCATCAATGTTGGCCATGCTGATCTTCGCAACGAAACATGGTGGCCTTCACTCTCAACCCCAGATGACCTTGTCTCAATCCTCAGCACCCTAATTTGGCTAGCCTCAGCTCAACATGCTGCCCTTAATTTTGCACAATACCCCTATGGTGGGTATGTCCCGAATCGCCCACCATTGATGAGAAGATTGATCCCAGAAGAGACTGACCCCGAATATGCAAACTTCTTAGCAGACCCTCAAAAGTACTTTCTATCAGCATTGCCTAGTGTTCTTCAGGCTACCAAATACATGGCTGTTGTGGACACATTGTCAACACATTCACCAGATGAGGAGTACCTTGGGGAGAGGCAACAGCCCTCGACTTGGTCCGGCGATGCTGATGTGGTTGAGGCGTTTTACAAGTTCTCGGCTGAGATTAGAGACATAGAGAAAGAGATTGACAGAAGGAATAGCGATCCAAGCCTTAAGCATAGGTGTGGAGCGGGAGTTTTGCCTTATGAATTACTAGCACCGAGTTCGGAACCTGGGATTACATGTCGTGGTGTACCTAATAGTGTGTCAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009555 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010193 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0022414 GO:0030258 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0034440 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051213 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0080086 GO:0090567 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

915

Amino Acids

103.23

Weight (kDa)

7.33

Isoelectric Point (pI)

44.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	132 - 217	3.4e-13	PLAT/LH2 domain
Lipoxygenase	PF00305	230 - 666	1.1e-193	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17420 AT1G72520
fragaria_vesca	FvH4_4g01390 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970
malus_domestica	MD05G1339200.v1.1 MD05G1339300.v1.1 MD05G1339400.v1.1 MD09G1180900.v1.1 MD10G1294000.v1.1 MD17G1167100.v1.1
prunus_persica	Prupe.3G039200_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1
pyrus_communis	pycom09g09820 pycom09g09830 pycom10g24590 pycom17g15900
rosa_chinensis	RchiOBHm_Chr2g0145961 RchiOBHm_Chr3g0472481 RchiOBHm_Chr5g0008481 RchiOBHm_Chr5g0008501 RchiOBHm_Chr5g0008511
rosa_laevigata	RLG00000020179 RLG00000024076 RLG00000031573 RLG00000031574 RLG00000031576
rosa_multiflora	Rmu_sc0001665.1_g000013 Rmu_sc0001702.1_g000033 Rmu_sc0002145.1_g000002 Rmu_sc0034682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434820 Rroxscaffold_2G00100350
rosa_rugosa	Rorug02G0393500 Rorug03G0125900 Rorug04G0435900.1 Rorug04G0436000 Rorug04G0436400 Rorug04G0436400 Rorug04G0436500
rosa_samantha	Rh2BG460800 Rh2DG470100 Rh3AG177700 Rh3BG203600 Rh3CG194000 Rh3CG201100 Rh3DG171500 Rh5AG064800 Rh5AG064900 Rh5AG065200 Rh5BG061900 Rh5BG062100 Rh5BG062300 Rh5BG062400 Rh5BG062500 Rh5CG072000 Rh5CG072200 Rh5CG072300 Rh5CG072400 Rh5CG072600 Rh5CG072800 Rh5DG063500 Rh5DG063700 Rh5DG063900
rosa_wichuraiana	Rw2G036640 Rw3G016380 Rw5G005580 Rw5G005590 Rw5G005600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1700
Acc36I	ACCTGC	1 cut(s)	1029
AccB7I	CCANNNNNTGG	1 cut(s)	1595
AccBSI	CCGCTC	1 cut(s)	2660
AccI	GTMKAC	1 cut(s)	1638
AccII	CGCG	1 cut(s)	1520
AciI	CCGC	4 cut(s)	579, 1906, 1932, 2660
AclWI	GGATC	7 cut(s)	773, 1334, 1561, 1805, 1818, 2362, 2627
AcoI	YGGCCR	3 cut(s)	877, 1903, 2191
AcsI	RAATTY	5 cut(s)	849, 1145, 1172, 1194, 1259
AcuI	CTGAAG	3 cut(s)	737, 1365, 2435
AcyI	GRCGYC	3 cut(s)	1104, 1641, 1695
AfiI	CCNNNNNNNGG	9 cut(s)	808, 809, 836, 1595, 1993, 2274, 2327, 2328, 2541
AflII	CTTAAG	2 cut(s)	1139, 2642
AflIII	ACRYGT	1 cut(s)	2711
AhdI	GACNNNNNGTC	2 cut(s)	46, 2485
AjiI	CACGTC	1 cut(s)	1681
AjnI	CCWGG	4 cut(s)	502, 605, 792, 2701
Alw21I	GWGCWC	3 cut(s)	1014, 1719, 2138
Alw26I	GTCTC	6 cut(s)	545, 1300, 1589, 2257, 2372, 2592
Alw44I	GTGCAC	1 cut(s)	1715
AlwI	GGATC	7 cut(s)	773, 1334, 1561, 1805, 1818, 2362, 2627
AlwNI	CAGNNNCTG	1 cut(s)	2003
AoxI	GGCC	7 cut(s)	95, 827, 877, 1848, 1903, 2191, 2222
ApaI	GGGCCC	1 cut(s)	99
ApaLI	GTGCAC	1 cut(s)	1715
ApeKI	GCWGC	5 cut(s)	173, 218, 1246, 1763, 2297
ApoI	RAATTY	5 cut(s)	849, 1145, 1172, 1194, 1259
ArsI	GACNNNNNNTTYG	2 cut(s)	476, 508
AseI	ATTAAT	1 cut(s)	1491
AspLEI	GCGC	2 cut(s)	1928, 1950
AspS9I	GGNCC	8 cut(s)	95, 96, 581, 842, 1355, 1598, 1849, 2544
AsuC2I	CCSGG	2 cut(s)	1902, 1988
AsuHPI	GGTGA	6 cut(s)	118, 268, 469, 620, 743, 2490
AsuNHI	GCTAGC	1 cut(s)	2278
AvaII	GGWCC	5 cut(s)	581, 842, 1355, 1598, 2544
BaeGI	GKGCMC	2 cut(s)	99, 1719
BalI	TGGCCA	1 cut(s)	2193
BamHI	GGATCC	1 cut(s)	1810
BanII	GRGCYC	3 cut(s)	99, 693, 2138
BbsI	GAAGAC	3 cut(s)	42, 640, 875
Bbv12I	GWGCWC	3 cut(s)	1014, 1719, 2138
BbvCI	CCTCAGC	2 cut(s)	2261, 2284
BbvI	GCAGC	5 cut(s)	160, 230, 1233, 1775, 2284
BccI	CCATC	7 cut(s)	31, 569, 728, 1496, 1868, 2057, 2189
BceAI	ACGGC	1 cut(s)	864
BcgI	CGANNNNNNTGC	2 cut(s)	2676, 2710
BciT130I	CCWGG	4 cut(s)	504, 607, 794, 2703
BcnI	CCSGG	2 cut(s)	1902, 1988
BcoDI	GTCTC	6 cut(s)	545, 1300, 1589, 2257, 2372, 2592
BfaI	CTAG	7 cut(s)	117, 825, 861, 1832, 2279, 2442, 2684
BfmI	CTRYAG	3 cut(s)	216, 1093, 1359
BfoI	RGCGCY	2 cut(s)	1929, 1951
BfrI	CTTAAG	2 cut(s)	1139, 2642
BfuAI	ACCTGC	1 cut(s)	1029
BglII	AGATCT	1 cut(s)	1975
BisI	GCNGC	6 cut(s)	174, 219, 1247, 1764, 1906, 2298
BlpI	GCTNAGC	1 cut(s)	1614
BlsI	GCNGC	6 cut(s)	175, 220, 1248, 1765, 1907, 2299
BmcAI	AGTACT	1 cut(s)	2423
Bme1390I	CCNGG	6 cut(s)	504, 607, 794, 1902, 1988, 2703
Bme18I	GGWCC	5 cut(s)	581, 842, 1355, 1598, 2544
BmeRI	GACNNNNNGTC	2 cut(s)	46, 2485
BmgBI	CACGTC	1 cut(s)	1681
BmgT120I	GGNCC	8 cut(s)	95, 96, 581, 842, 1355, 1598, 1849, 2544
BmiI	GGNNCC	4 cut(s)	97, 1749, 1812, 2700
BmrFI	CCNGG	6 cut(s)	504, 607, 794, 1902, 1988, 2703
BmrI	ACTGGG	1 cut(s)	93
BmsI	GCATC	4 cut(s)	304, 538, 600, 2542
BmtI	GCTAGC	1 cut(s)	2282
BmuI	ACTGGG	1 cut(s)	93
BpiI	GAAGAC	3 cut(s)	42, 640, 875
BplI	GAGNNNNNCTC	2 cut(s)	470, 502
BpmI	CTGGAG	1 cut(s)	666
Bpu10I	CCTNAGC	2 cut(s)	2261, 2284
Bpu1102I	GCTNAGC	1 cut(s)	1614
BpuEI	CTTGAG	1 cut(s)	677
BpuMI	CCSGG	2 cut(s)	1902, 1988
BsaAI	YACGTR	2 cut(s)	943, 1730
BsaBI	GATNNNNATC	1 cut(s)	560
BsaHI	GRCGYC	3 cut(s)	1104, 1641, 1695
BsaWI	WCCGGW	1 cut(s)	1633
BsaXI	ACNNNNNCTCC	4 cut(s)	118, 148, 2649, 2679
Bsc4I	CCNNNNNNNGG	9 cut(s)	808, 809, 836, 1595, 1993, 2274, 2327, 2328, 2541
Bse118I	RCCGGY	2 cut(s)	875, 1697
Bse1I	ACTGG	3 cut(s)	99, 1325, 1565
Bse3DI	GCAATG	4 cut(s)	584, 1151, 1791, 2435
Bse8I	GATNNNNATC	1 cut(s)	560
BseBI	CCWGG	4 cut(s)	504, 607, 794, 2703
BseGI	GGATG	4 cut(s)	126, 319, 615, 1209
BseJI	GATNNNNATC	1 cut(s)	560
BseLI	CCNNNNNNNGG	9 cut(s)	808, 809, 836, 1595, 1993, 2274, 2327, 2328, 2541
BseMI	GCAATG	4 cut(s)	584, 1151, 1791, 2435
BseMII	CTCAG	7 cut(s)	380, 462, 739, 2187, 2275, 2298, 2580
BseNI	ACTGG	3 cut(s)	99, 1325, 1565
BseRI	GAGGAG	4 cut(s)	139, 980, 1620, 2522
BseSI	GKGCMC	2 cut(s)	99, 1719
BseX3I	CGGCCG	2 cut(s)	877, 1903
BseXI	GCAGC	5 cut(s)	160, 230, 1233, 1775, 2284
BsgI	GTGCAG	1 cut(s)	1353
Bsh1236I	CGCG	1 cut(s)	1520
Bsh1285I	CGRYCG	3 cut(s)	880, 1638, 1906
BshFI	GGCC	7 cut(s)	97, 829, 879, 1850, 1905, 2193, 2224
BsiEI	CGRYCG	3 cut(s)	880, 1638, 1906
BsiHKAI	GWGCWC	3 cut(s)	1014, 1719, 2138
BsiSI	CCGG	6 cut(s)	876, 1634, 1698, 1902, 1987, 2547
BslFI	GGGAC	1 cut(s)	2321
BslI	CCNNNNNNNGG	9 cut(s)	808, 809, 836, 1595, 1993, 2274, 2327, 2328, 2541
BsmAI	GTCTC	6 cut(s)	545, 1300, 1589, 2257, 2372, 2592
BsmBI	CGTCTC	1 cut(s)	545
BsmFI	GGGAC	1 cut(s)	2321
BsnI	GGCC	7 cut(s)	97, 829, 879, 1850, 1905, 2193, 2224
Bsp120I	GGGCCC	1 cut(s)	95
Bsp1286I	GDGCHC	5 cut(s)	99, 693, 1014, 1719, 2138
Bsp1407I	TGTACA	1 cut(s)	1443
Bsp1720I	GCTNAGC	1 cut(s)	1614
Bsp19I	CCATGG	2 cut(s)	1914, 2020
BspACI	CCGC	4 cut(s)	579, 1906, 1932, 2660
BspANI	GGCC	7 cut(s)	97, 829, 879, 1850, 1905, 2193, 2224
BspCNI	CTCAG	7 cut(s)	379, 463, 738, 2186, 2274, 2297, 2581
BspFNI	CGCG	1 cut(s)	1520
BspHI	TCATGA	1 cut(s)	1459
BspLI	GGNNCC	4 cut(s)	97, 1749, 1812, 2700
BspMAI	CTGCAG	1 cut(s)	220
BspMI	ACCTGC	1 cut(s)	1029
BspOI	GCTAGC	1 cut(s)	2282
BspPI	GGATC	7 cut(s)	773, 1334, 1561, 1805, 1818, 2362, 2627
BspTI	CTTAAG	2 cut(s)	1139, 2642
BsrBI	CCGCTC	1 cut(s)	2660
BsrDI	GCAATG	4 cut(s)	584, 1151, 1791, 2435
BsrFI	RCCGGY	2 cut(s)	875, 1697
BsrGI	TGTACA	1 cut(s)	1443
BsrI	ACTGG	3 cut(s)	99, 1325, 1565
BssAI	RCCGGY	2 cut(s)	875, 1697
BssNI	GRCGYC	3 cut(s)	1104, 1641, 1695
BssT1I	CCWWGG	6 cut(s)	1189, 1671, 1743, 1914, 2020, 2515
Bst2UI	CCWGG	4 cut(s)	504, 607, 794, 2703
Bst4CI	ACNGT	5 cut(s)	262, 309, 517, 1414, 1776
Bst6I	CTCTTC	1 cut(s)	2370
BstACI	GRCGYC	3 cut(s)	1104, 1641, 1695
BstAFI	CTTAAG	2 cut(s)	1139, 2642
BstAUI	TGTACA	1 cut(s)	1443
BstBAI	YACGTR	2 cut(s)	943, 1730
BstC8I	GCNNGC	2 cut(s)	577, 2280
BstDSI	CCRYGG	3 cut(s)	1066, 1914, 2020
BstF5I	GGATG	4 cut(s)	126, 319, 615, 1209
BstFNI	CGCG	1 cut(s)	1520
BstH2I	RGCGCY	2 cut(s)	1929, 1951
BstHHI	GCGC	2 cut(s)	1928, 1950
BstMAI	GTCTC	6 cut(s)	545, 1300, 1589, 2257, 2372, 2592
BstMCI	CGRYCG	3 cut(s)	880, 1638, 1906
BstMWI	GCNNNNNNNGC	5 cut(s)	173, 1095, 1271, 2294, 2637
BstNI	CCWGG	4 cut(s)	504, 607, 794, 2703
BstNSI	RCATGY	2 cut(s)	2297, 2715
BstSCI	CCNGG	6 cut(s)	502, 605, 792, 1900, 1986, 2701
BstSFI	CTRYAG	3 cut(s)	216, 1093, 1359
BstSLI	GKGCMC	2 cut(s)	99, 1719
BstSNI	TACGTA	2 cut(s)	943, 1730
BstUI	CGCG	1 cut(s)	1520
BstV1I	GCAGC	5 cut(s)	160, 230, 1233, 1775, 2284
BstV2I	GAAGAC	3 cut(s)	42, 640, 875
BstX2I	RGATCY	4 cut(s)	765, 1553, 1810, 1975
BstXI	CCANNNNNNTGG	2 cut(s)	310, 2467
BstYI	RGATCY	4 cut(s)	765, 1553, 1810, 1975
BstZI	CGGCCG	2 cut(s)	877, 1903
BsuRI	GGCC	7 cut(s)	97, 829, 879, 1850, 1905, 2193, 2224
BtgI	CCRYGG	3 cut(s)	1066, 1914, 2020
BtgZI	GCGATG	1 cut(s)	2565
BtrI	CACGTC	1 cut(s)	1681
BtsCI	GGATG	4 cut(s)	126, 319, 615, 1209
BtsI	GCAGTG	3 cut(s)	409, 1281, 2065
BtsIMutI	CAGTG	5 cut(s)	187, 409, 1281, 1332, 2065
BveI	ACCTGC	1 cut(s)	1029
Cac8I	GCNNGC	2 cut(s)	577, 2280
CaiI	CAGNNNCTG	1 cut(s)	2003
CciI	TCATGA	1 cut(s)	1459
CfoI	GCGC	2 cut(s)	1928, 1950
Cfr10I	RCCGGY	2 cut(s)	875, 1697
Cfr13I	GGNCC	8 cut(s)	95, 96, 581, 842, 1355, 1598, 1849, 2544
CseI	GACGC	3 cut(s)	1093, 1649, 1703
DrdI	GACNNNNNNGTC	1 cut(s)	1700
DriI	GACNNNNNGTC	2 cut(s)	46, 2485
DseDI	GACNNNNNNGTC	1 cut(s)	1700
EaeI	YGGCCR	3 cut(s)	877, 1903, 2191
EagI	CGGCCG	2 cut(s)	877, 1903
Eam1104I	CTCTTC	1 cut(s)	2370
Eam1105I	GACNNNNNGTC	2 cut(s)	46, 2485
EarI	CTCTTC	1 cut(s)	2370
EciI	GGCGGA	1 cut(s)	1921
Ecl136II	GAGCTC	1 cut(s)	2136
EclXI	CGGCCG	2 cut(s)	877, 1903
Eco105I	TACGTA	2 cut(s)	943, 1730
Eco130I	CCWWGG	6 cut(s)	1189, 1671, 1743, 1914, 2020, 2515
Eco147I	AGGCCT	1 cut(s)	829
Eco24I	GRGCYC	3 cut(s)	99, 693, 2138
Eco47I	GGWCC	5 cut(s)	581, 842, 1355, 1598, 2544
Eco52I	CGGCCG	2 cut(s)	877, 1903
Eco53kI	GAGCTC	1 cut(s)	2136
Eco57I	CTGAAG	3 cut(s)	737, 1365, 2435
EcoICRI	GAGCTC	1 cut(s)	2136
EcoRI	GAATTC	1 cut(s)	1194
EcoRII	CCWGG	4 cut(s)	502, 605, 792, 2701
EcoT14I	CCWWGG	6 cut(s)	1189, 1671, 1743, 1914, 2020, 2515
EcoT22I	ATGCAT	1 cut(s)	1846
EcoT38I	GRGCYC	3 cut(s)	99, 693, 2138
ErhI	CCWWGG	6 cut(s)	1189, 1671, 1743, 1914, 2020, 2515
Esp3I	CGTCTC	1 cut(s)	545
FalI	AAGNNNNNCTT	4 cut(s)	1092, 1124, 1122, 1154
FaqI	GGGAC	1 cut(s)	2321
FauI	CCCGC	1 cut(s)	2653
FauNDI	CATATG	2 cut(s)	1818, 2053
FblI	GTMKAC	1 cut(s)	1638
Fnu4HI	GCNGC	6 cut(s)	174, 219, 1247, 1764, 1906, 2298
FokI	GGATG	4 cut(s)	133, 326, 622, 1196
FriOI	GRGCYC	3 cut(s)	99, 693, 2138
Fsp4HI	GCNGC	6 cut(s)	174, 219, 1247, 1764, 1906, 2298
FspBI	CTAG	7 cut(s)	117, 825, 861, 1832, 2279, 2442, 2684
GlaI	GCGC	2 cut(s)	1927, 1949
GluI	GCNGC	6 cut(s)	174, 219, 1247, 1764, 1906, 2298
GsuI	CTGGAG	1 cut(s)	666
HaeII	RGCGCY	2 cut(s)	1929, 1951
HaeIII	GGCC	7 cut(s)	97, 829, 879, 1850, 1905, 2193, 2224
HapII	CCGG	6 cut(s)	876, 1634, 1698, 1902, 1987, 2547
HgaI	GACGC	3 cut(s)	1093, 1649, 1703
HhaI	GCGC	2 cut(s)	1928, 1950
Hin1I	GRCGYC	3 cut(s)	1104, 1641, 1695
Hin6I	GCGC	2 cut(s)	1926, 1948
HinP1I	GCGC	2 cut(s)	1926, 1948
HincII	GTYRAC	2 cut(s)	1639, 2490
HindII	GTYRAC	2 cut(s)	1639, 2490
HindIII	AAGCTT	2 cut(s)	1042, 1802
HpaII	CCGG	6 cut(s)	876, 1634, 1698, 1902, 1987, 2547
HphI	GGTGA	6 cut(s)	118, 268, 469, 620, 743, 2490
Hpy188I	TCNGA	8 cut(s)	78, 369, 760, 910, 1054, 2102, 2176, 2698
Hpy188III	TCNNGA	6 cut(s)	683, 1343, 1460, 1481, 1608, 2338
Hpy99I	CGWCG	2 cut(s)	1643, 1697
HpyCH4III	ACNGT	5 cut(s)	262, 309, 517, 1414, 1776
HpyCH4IV	ACGT	4 cut(s)	942, 1464, 1680, 1729
HpyF10VI	GCNNNNNNNGC	5 cut(s)	173, 1095, 1271, 2294, 2637
HpySE526I	ACGT	4 cut(s)	942, 1464, 1680, 1729
Hsp92I	GRCGYC	3 cut(s)	1104, 1641, 1695
HspAI	GCGC	2 cut(s)	1926, 1948
LmnI	GCTCC	8 cut(s)	164, 352, 506, 1017, 1029, 1747, 2081, 2657
Lsp1109I	GCAGC	5 cut(s)	160, 230, 1233, 1775, 2284
LweI	GCATC	4 cut(s)	304, 538, 600, 2542
MaeI	CTAG	7 cut(s)	117, 825, 861, 1832, 2279, 2442, 2684
MaeII	ACGT	4 cut(s)	942, 1464, 1680, 1729
MaeIII	GTNAC	4 cut(s)	256, 517, 1725, 2157
MbiI	CCGCTC	1 cut(s)	2660
MfeI	CAATTG	1 cut(s)	1425
MflI	RGATCY	4 cut(s)	765, 1553, 1810, 1975
MhlI	GDGCHC	5 cut(s)	99, 693, 1014, 1719, 2138
MlsI	TGGCCA	1 cut(s)	2193
MluNI	TGGCCA	1 cut(s)	2193
MlyI	GAGTC	9 cut(s)	479, 673, 977, 1516, 1621, 1659, 1887, 1895, 2186
MmeI	TCCRAC	3 cut(s)	291, 911, 1713
Mox20I	TGGCCA	1 cut(s)	2193
Mph1103I	ATGCAT	1 cut(s)	1846
MscI	TGGCCA	1 cut(s)	2193
MseI	TTAA	6 cut(s)	72, 276, 1140, 1491, 2304, 2643
MslI	CAYNNNNRTG	2 cut(s)	1401, 2652
Msp20I	TGGCCA	1 cut(s)	2193
MspA1I	CMGCKG	1 cut(s)	470
MspCI	CTTAAG	2 cut(s)	1139, 2642
MspI	CCGG	6 cut(s)	876, 1634, 1698, 1902, 1987, 2547
MspR9I	CCNGG	6 cut(s)	504, 607, 794, 1902, 1988, 2703
MunI	CAATTG	1 cut(s)	1425
MvaI	CCWGG	4 cut(s)	504, 607, 794, 2703
MvnI	CGCG	1 cut(s)	1520
MwoI	GCNNNNNNNGC	5 cut(s)	173, 1095, 1271, 2294, 2637
NciI	CCSGG	2 cut(s)	1902, 1988
NcoI	CCATGG	2 cut(s)	1914, 2020
NdeI	CATATG	2 cut(s)	1818, 2053
NheI	GCTAGC	1 cut(s)	2278
NlaIV	GGNNCC	4 cut(s)	97, 1749, 1812, 2700
NmeAIII	GCCGAG	1 cut(s)	2564
NmuCI	GTSAC	1 cut(s)	256
NsiI	ATGCAT	1 cut(s)	1846
NspI	RCATGY	2 cut(s)	2297, 2715
PagI	TCATGA	1 cut(s)	1459
PceI	AGGCCT	1 cut(s)	829
PciI	ACATGT	1 cut(s)	2711
PcsI	WCGNNNNNNNCGW	1 cut(s)	877
PfeI	GAWTC	5 cut(s)	721, 1313, 1364, 2129, 2341
PflFI	GACNNNGTC	2 cut(s)	2249, 2542
PflMI	CCANNNNNTGG	1 cut(s)	1595
PfoI	TCCNGGA	1 cut(s)	605
PkrI	GCNGC	6 cut(s)	175, 220, 1248, 1765, 1907, 2299
PleI	GAGTC	9 cut(s)	479, 673, 976, 1516, 1621, 1659, 1886, 1894, 2185
PpsI	GAGTC	9 cut(s)	479, 673, 976, 1516, 1621, 1659, 1886, 1894, 2185
Ppu21I	YACGTR	2 cut(s)	943, 1730
PscI	ACATGT	1 cut(s)	2711
PshBI	ATTAAT	1 cut(s)	1491
Psp124BI	GAGCTC	1 cut(s)	2138
Psp6I	CCWGG	4 cut(s)	502, 605, 792, 2701
PspGI	CCWGG	4 cut(s)	502, 605, 792, 2701
PspN4I	GGNNCC	4 cut(s)	97, 1749, 1812, 2700
PspOMI	GGGCCC	1 cut(s)	95
PspPI	GGNCC	8 cut(s)	95, 96, 581, 842, 1355, 1598, 1849, 2544
PsrI	GAACNNNNNNTAC	4 cut(s)	1374, 1406, 1427, 1459
PstI	CTGCAG	1 cut(s)	220
PstNI	CAGNNNCTG	1 cut(s)	2003
PsuI	RGATCY	4 cut(s)	765, 1553, 1810, 1975
PsyI	GACNNNGTC	2 cut(s)	2249, 2542
PvuII	CAGCTG	1 cut(s)	470
RseI	CAYNNNNRTG	2 cut(s)	1401, 2652
SacI	GAGCTC	1 cut(s)	2138
SalI	GTCGAC	1 cut(s)	1637
SaqAI	TTAA	6 cut(s)	72, 276, 1140, 1491, 2304, 2643
SatI	GCNGC	6 cut(s)	174, 219, 1247, 1764, 1906, 2298
Sau96I	GGNCC	8 cut(s)	95, 96, 581, 842, 1355, 1598, 1849, 2544
ScaI	AGTACT	1 cut(s)	2423
SchI	GAGTC	9 cut(s)	479, 673, 977, 1516, 1621, 1659, 1887, 1895, 2186
ScrFI	CCNGG	6 cut(s)	504, 607, 794, 1902, 1988, 2703
SduI	GDGCHC	5 cut(s)	99, 693, 1014, 1719, 2138
SfaNI	GCATC	4 cut(s)	304, 538, 600, 2542
SfcI	CTRYAG	3 cut(s)	216, 1093, 1359
SgrAI	CRCCGGYG	1 cut(s)	1697
SinI	GGWCC	5 cut(s)	581, 842, 1355, 1598, 2544
SmiMI	CAYNNNNRTG	2 cut(s)	1401, 2652
SmlI	CTYRAG	3 cut(s)	692, 1139, 2642
SmoI	CTYRAG	3 cut(s)	692, 1139, 2642
SnaBI	TACGTA	2 cut(s)	943, 1730
SseBI	AGGCCT	1 cut(s)	829
SsiI	CCGC	4 cut(s)	579, 1906, 1932, 2660
SspMI	CTAG	7 cut(s)	117, 825, 861, 1832, 2279, 2442, 2684
SstI	GAGCTC	1 cut(s)	2138
StuI	AGGCCT	1 cut(s)	829
StyD4I	CCNGG	6 cut(s)	502, 605, 792, 1900, 1986, 2701
StyI	CCWWGG	6 cut(s)	1189, 1671, 1743, 1914, 2020, 2515
TaaI	ACNGT	5 cut(s)	262, 309, 517, 1414, 1776
TaiI	ACGT	4 cut(s)	945, 1467, 1683, 1732
TaqI	TCGA	4 cut(s)	564, 1638, 2132, 2537
TatI	WGTACW	2 cut(s)	1443, 2421
TauI	GCSGC	1 cut(s)	1908
TfiI	GAWTC	5 cut(s)	721, 1313, 1364, 2129, 2341
Tru1I	TTAA	6 cut(s)	72, 276, 1140, 1491, 2304, 2643
Tru9I	TTAA	6 cut(s)	72, 276, 1140, 1491, 2304, 2643
TscAI	CASTG	5 cut(s)	187, 409, 1281, 1332, 2065
TseFI	GTSAC	1 cut(s)	256
TseI	GCWGC	5 cut(s)	173, 218, 1246, 1763, 2297
Tsp45I	GTSAC	1 cut(s)	256
TspDTI	ATGAA	4 cut(s)	45, 969, 1744, 2691
TspGWI	ACGGA	1 cut(s)	1055
TspRI	CASTG	5 cut(s)	187, 409, 1281, 1332, 2065
Tth111I	GACNNNGTC	2 cut(s)	2249, 2542
Van91I	CCANNNNNTGG	1 cut(s)	1595
Vha464I	CTTAAG	2 cut(s)	1139, 2642
VneI	GTGCAC	1 cut(s)	1715
VpaK11BI	GGWCC	5 cut(s)	581, 842, 1355, 1598, 2544
VspI	ATTAAT	1 cut(s)	1491
XapI	RAATTY	5 cut(s)	849, 1145, 1172, 1194, 1259
XceI	RCATGY	2 cut(s)	2297, 2715
XmiI	GTMKAC	1 cut(s)	1638
XspI	CTAG	7 cut(s)	117, 825, 861, 1832, 2279, 2442, 2684
ZrmI	AGTACT	1 cut(s)	2423
Zsp2I	ATGCAT	1 cut(s)	1846

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.