RLG00000024076

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000650
Physical Location & Seq
Reverse (-)
31513244 .. 31517534
4291 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024076

Sequence Viewer

Length: 2715 bp
ATGAGAGTTATGGCATCTATTATGGGCGTAACACTGGTAGCACATGATTTCAATCCCCTTAGTTCAAAACCAAGAGCCTTAAGCATCCAAAAACTTCCTTCTCCTGCCAATTTATTTTCTTCGACGACCAAGACAAGGAGAGTCGAGTTACAAAGCAAGAAGAAGAAGAAGAAGAAGATGGCAACCGTAGCAGTAGTGAATCTTAATACAACAACCAATGGTGCTCTTGCTCATGCGGACATGGTAACATCCTCTCTTGCTCTTACAGCAGAGAAGCCTGCAGTGACTTTCGAACTCATTGCCATAGTCACTGTGAAGAATATTCATCAGAAGGTAAATATCCATGTCGACACAATGCTTCATTGGTTCGGCGACAGAAGACACGATGATTACAAGGGCGGAGCACTTCTACAGCTTGTTAGTACTCAAACTGCCCCAAAGGGAGTGAAGCCGAAACTAAGCCAGGAAGCTGTATTGGATTGGACAAAGAATCCGAAAATGGGTGATGAGAAGAACAGTTACCAAGTCAAGTTTGTGGTGGACTCAACATTTGGGATGCCAGGAGCCATTACAGTGAGTAACAGATATGATGAGGAGTTTTATTTGGATAGCATTAACATTGAAGGTCTCGTTCACTTTGCCTGCAACTCTTGGGTTCAACCAGATCAGAAGTCTAACGCAGCAAAAAGAATCTTCTTCTCTACTAAGGCATACTTACCCAATGAGACACCAGCTGGGCTGAAAGAGCTAAGAGAAATGGAGCTGATTCAACTGAGGGGCCACGGGACTGGGCTTAGATTGCAATCTGAAAGAATATACGACTACGACACTTATAATGACATTGGAAATCCAGATAAGGGAATTGAGTACATAAGACCTACCCTTGGAGGGAATGTTCACCCACACCCTAGACGCTGTCGAACTGGACGCCCTCCAACCAAGACCGATGAGAACATGGAGTCACCGGTGAGCGTATTCGAGACAATCTATGTGCCTAGAGATGAAGAGTTTGAGCAGCCCAAACAAGAAGCTCTAAATGTCGGAAAGTTGAAAGGAACTGTCCGCAATATAACTCATGCACTTTCAACAATTACTGCAGATAGAAATGTGAAGGGGTATTCGGACATCAATGGTCTGTATACAGATTCTTCTTCTCTTCAATCCAAGACCCGGCCGGGAACTCAAATTTTGAACAAAGTCCACGAATTCCTCAAATTTGACCCCCCAAAATTAAACTCAAGGGAGATATATTGTCTGCTAGATGACCAATTTGGGCGCCAAACCATTGCAGGCATAAACCCTTTAAGCATAGAAAGGCTCGAGGTTTTCCCACCTGTAAGCAAACTAGACACCTCCATTTATGGTCCTCAAGAATCAGCACTCAAGGAAGAACATATAATAGGCCAACTAAACAACAAGCTGTTCATACTAGACTACCATGACATTTTTCTTCCATTTCTCAACAAAATAAACGCTCTAGATGACCGGAAAGCTTATGCAACACGAACAATTTTTTTCCTGACATCATTAGGAACTTTGAAGCCCATTGCTATTGAGCTCAGTCTTTCAGATTCAGCATCCAAGCAGGTTCTCACTCCTCCAATTGATGCTACGACAAGTTGGCTTTGGCAGCTTGGCAAGGCTAATGTATGCTCCAATGATGCCGGTGTTCATCAACTCGTTCATCACTGGTTACGCACCCACGCCTGCATAGAACCGATTATAATAGCAACTCATAGACAACTGAGTGTTATGCACCCTATCTACAAGCTTCTCAAACCTCACTTGCGCTATACCTTGAAGGTAAATGCTATGGCCCGTAAGGATCTCATCAACGCCGGAGGGACAATCGAGTCCAATTTTACTCCTGCCAAATACTGCATGGAGTTCAGTTGTGCTGCTTATCGAGATTGGTGGCGCTTTGACCTTGAAGGTCTTCCTGCAGATCTCATTAGAAGAGGAATAGCTGTACCAGACACAAGTCAAGTGCATGGGCTAAAACTACTCATTCAAGACTACCCTTATGCAACAGATGGGCTCCTCATATGGTCAGCAATTGAGACATTGGTTCAAACCTATGTTAATTACTACTACCCTAATGCAAGTTTGGTCACTTCAGATACTGAACTCCAATCCTGGTACGATGAATTTATCAATTTGGGACATGCCGATCTTCGCGACGCTAGCTGGTGGCCAAAACTCTCTACGCAGGAGGATCTCATCTCCATTCTCACCACCATCATTTGGCTCACATCAGCGCAACACGCTGCTCTAAACTTCGGGCAATACCCTTATGGTGGCTATGTCCCAACCCGCCCACCACACATGAGGAGACTAATTCCAAAAAACGATGAGCCGGAGTATGCTTCTTTCATTAGGGATCCTCAGCAGTACTTCATATCCTCATTGCCGAGTTTATTTGAAGCAACGAAGTACATGGCTGTAATTGATATAATCTCCGCACATTCACCGGATGAAGAATACATTGGGGAGAGAAAAGACTTGTTAAACTGGTCAGCTGACACTGAGATTAGTGAGGCATTTTACAGATTTTCAGTGGAAATGAGGAGGATTGAGAAAGAGATTGAACGAAGAAACGGGGATTCAAGTCTCCGGAATAGATTTGGGGCTGGGGTTTCACCATACGAGCTTCTCATGCCGAGCTCAGAACCTGGGGTTACCTGCAGAGGTGTTCCAAATAGTATAACAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

905

Amino Acids

102.15

Weight (kDa)

7.37

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 150 - 233 2.9e-06 PLAT/LH2 domain
Lipoxygenase PF00305 246 - 887 7.4e-272 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 834, 1724
AasI GACNNNNNNGTC 1 cut(s) 1852
Acc36I ACCTGC 2 cut(s) 1576, 2690
AccB1I GGYRCC 1 cut(s) 1275
AccB7I CCANNNNNTGG 1 cut(s) 2244
AccI GTMKAC 2 cut(s) 348, 1139
AccII CGCG 1 cut(s) 2178
AccIII TCCGGA 1 cut(s) 2613
AciI CCGC 5 cut(s) 236, 399, 1063, 2314, 2460
AclWI GGATC 4 cut(s) 1833, 2223, 2375, 2388
AcoI YGGCCR 2 cut(s) 1172, 2192
AcsI RAATTY 4 cut(s) 1185, 1205, 1214, 2147
AcuI CTGAAG 1 cut(s) 2100
AcyI GRCGYC 2 cut(s) 928, 1276
AfaI GTAC 6 cut(s) 424, 869, 1971, 2141, 2393, 2435
AfiI CCNNNNNNNGG 8 cut(s) 135, 500, 857, 884, 888, 1170, 2244, 2297
AflII CTTAAG 1 cut(s) 79
AgeI ACCGGT 1 cut(s) 964
AjnI CCWGG 4 cut(s) 462, 559, 2135, 2671
AjuI GAANNNNNNNTTGG 2 cut(s) 2469, 2501
AloI GAACNNNNNNTCC 2 cut(s) 879, 911
Alw21I GWGCWC 4 cut(s) 226, 406, 1560, 2666
Alw26I GTCTC 6 cut(s) 632, 719, 974, 2054, 2326, 2615
AlwI GGATC 4 cut(s) 1833, 2223, 2375, 2388
AlwNI CAGNNNCTG 2 cut(s) 2123, 2672
Ama87I CYCGRG 1 cut(s) 1319
Aor13HI TCCGGA 1 cut(s) 2613
AoxI GGCC 5 cut(s) 778, 1172, 1402, 1815, 2192
ApeKI GCWGC 5 cut(s) 680, 1015, 1630, 1898, 2267
ApoI RAATTY 4 cut(s) 1185, 1205, 1214, 2147
ArsI GACNNNNNNTTYG 2 cut(s) 533, 565
AsiGI ACCGGT 1 cut(s) 964
Asp700I GAANNNNTTC 1 cut(s) 1935
AspLEI GCGC 4 cut(s) 1278, 1791, 1920, 2260
AspS9I GGNCC 3 cut(s) 778, 1364, 1816
AsuC2I CCSGG 2 cut(s) 1171, 1176
AsuHPI GGTGA 7 cut(s) 515, 890, 954, 979, 2224, 2460, 2631
AsuII TTCGAA 1 cut(s) 291
AsuNHI GCTAGC 1 cut(s) 2183
AvaI CYCGRG 1 cut(s) 1319
AvaII GGWCC 1 cut(s) 1364
BalI TGGCCA 1 cut(s) 2194
BamHI GGATCC 1 cut(s) 2380
BanI GGYRCC 1 cut(s) 1275
BanII GRGCYC 3 cut(s) 1560, 2040, 2666
BarI GAAGNNNNNNTAC 2 cut(s) 503, 535
BbsI GAAGAC 2 cut(s) 385, 1928
Bbv12I GWGCWC 4 cut(s) 226, 406, 1560, 2666
BbvCI CCTCAGC 1 cut(s) 2385
BbvI GCAGC 5 cut(s) 692, 1027, 1642, 1885, 2254
BccI CCATC 3 cut(s) 172, 2027, 2246
BcgI CGANNNNNNTGC 2 cut(s) 281, 315
BciT130I CCWGG 4 cut(s) 464, 561, 2137, 2673
BcnI CCSGG 2 cut(s) 1171, 1176
BcoDI GTCTC 6 cut(s) 632, 719, 974, 2054, 2326, 2615
BfaI CTAG 7 cut(s) 909, 996, 1259, 1346, 1430, 1478, 2184
BfmI CTRYAG 5 cut(s) 279, 410, 1095, 1941, 2683
BfoI RGCGCY 2 cut(s) 1279, 1921
BfrI CTTAAG 1 cut(s) 79
BfuAI ACCTGC 2 cut(s) 1576, 2690
BglII AGATCT 1 cut(s) 1945
BisI GCNGC 5 cut(s) 681, 1016, 1631, 1899, 2268
BlsI GCNGC 5 cut(s) 682, 1017, 1632, 1900, 2269
BmcAI AGTACT 2 cut(s) 424, 2393
Bme1390I CCNGG 6 cut(s) 464, 561, 1171, 1176, 2137, 2673
Bme18I GGWCC 1 cut(s) 1364
BmeT110I CYCGRG 1 cut(s) 1319
BmgT120I GGNCC 3 cut(s) 778, 1364, 1816
BmiI GGNNCC 5 cut(s) 565, 779, 1277, 2039, 2382
BmrFI CCNGG 6 cut(s) 464, 561, 1171, 1176, 2137, 2673
BmrI ACTGGG 1 cut(s) 798
BmsI GCATC 6 cut(s) 23, 93, 546, 1586, 1597, 1651
BmtI GCTAGC 1 cut(s) 2187
BmuI ACTGGG 1 cut(s) 798
BoxI GACNNNNGTC 1 cut(s) 1980
BpiI GAAGAC 2 cut(s) 385, 1928
Bpu10I CCTNAGC 1 cut(s) 2385
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 3 cut(s) 1222, 1353, 1367
BpuMI CCSGG 2 cut(s) 1171, 1176
BsaBI GATNNNNATC 2 cut(s) 51, 802
BsaHI GRCGYC 2 cut(s) 928, 1276
BsaI GGTCTC 1 cut(s) 632
BsaJI CCNNGG 3 cut(s) 781, 883, 2672
BsaWI WCCGGW 4 cut(s) 964, 1485, 2470, 2613
BsaXI ACNNNNNCTCC 2 cut(s) 879, 909
Bsc4I CCNNNNNNNGG 8 cut(s) 135, 500, 857, 884, 888, 1170, 2244, 2297
Bse118I RCCGGY 2 cut(s) 964, 1664
Bse1I ACTGG 5 cut(s) 39, 793, 928, 1694, 2516
Bse3DI GCAATG 4 cut(s) 297, 1284, 1545, 2405
Bse8I GATNNNNATC 2 cut(s) 51, 802
BseAI TCCGGA 1 cut(s) 2613
BseBI CCWGG 4 cut(s) 464, 561, 2137, 2673
BseDI CCNNGG 3 cut(s) 781, 883, 2672
BseGI GGATG 5 cut(s) 84, 248, 561, 1577, 2479
BseJI GATNNNNATC 2 cut(s) 51, 802
BseLI CCNNNNNNNGG 8 cut(s) 135, 500, 857, 884, 888, 1170, 2244, 2297
BseMI GCAATG 4 cut(s) 297, 1284, 1545, 2405
BseMII CTCAG 6 cut(s) 764, 1573, 1736, 2399, 2517, 2679
BseNI ACTGG 5 cut(s) 39, 793, 928, 1694, 2516
BseRI GAGGAG 5 cut(s) 608, 1587, 2030, 2344, 2581
BseX3I CGGCCG 1 cut(s) 1172
BseXI GCAGC 5 cut(s) 692, 1027, 1642, 1885, 2254
BseYI CCCAGC 2 cut(s) 734, 2630
Bsh1236I CGCG 1 cut(s) 2178
Bsh1285I CGRYCG 1 cut(s) 1175
BshFI GGCC 5 cut(s) 780, 1174, 1404, 1817, 2194
BshNI GGYRCC 1 cut(s) 1275
BshTI ACCGGT 1 cut(s) 964
BsiEI CGRYCG 1 cut(s) 1175
BsiHKAI GWGCWC 4 cut(s) 226, 406, 1560, 2666
BsiHKCI CYCGRG 1 cut(s) 1319
BsiSI CCGG 9 cut(s) 965, 1171, 1175, 1486, 1665, 1839, 2357, 2471, 2614
BslFI GGGAC 4 cut(s) 799, 1858, 2175, 2291
BslI CCNNNNNNNGG 8 cut(s) 135, 500, 857, 884, 888, 1170, 2244, 2297
BsmAI GTCTC 6 cut(s) 632, 719, 974, 2054, 2326, 2615
BsmFI GGGAC 4 cut(s) 799, 1858, 2175, 2291
BsnI GGCC 5 cut(s) 780, 1174, 1404, 1817, 2194
Bso31I GGTCTC 1 cut(s) 632
BsoBI CYCGRG 1 cut(s) 1319
Bsp119I TTCGAA 1 cut(s) 291
Bsp1286I GDGCHC 5 cut(s) 226, 406, 1560, 2040, 2666
Bsp13I TCCGGA 1 cut(s) 2613
Bsp143I GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
Bsp68I TCGCGA 1 cut(s) 2178
BspACI CCGC 5 cut(s) 236, 399, 1063, 2314, 2460
BspANI GGCC 5 cut(s) 780, 1174, 1404, 1817, 2194
BspCNI CTCAG 6 cut(s) 765, 1572, 1737, 2398, 2518, 2678
BspEI TCCGGA 1 cut(s) 2613
BspFNI CGCG 1 cut(s) 2178
BspLI GGNNCC 5 cut(s) 565, 779, 1277, 2039, 2382
BspMAI CTGCAG 4 cut(s) 283, 1099, 1945, 2687
BspMI ACCTGC 2 cut(s) 1576, 2690
BspOI GCTAGC 1 cut(s) 2187
BspPI GGATC 4 cut(s) 1833, 2223, 2375, 2388
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 1 cut(s) 1275
BspTI CTTAAG 1 cut(s) 79
BspTNI GGTCTC 1 cut(s) 632
BsrDI GCAATG 4 cut(s) 297, 1284, 1545, 2405
BsrFI RCCGGY 2 cut(s) 964, 1664
BsrI ACTGG 5 cut(s) 39, 793, 928, 1694, 2516
BssAI RCCGGY 2 cut(s) 964, 1664
BssECI CCNNGG 3 cut(s) 781, 883, 2672
BssMI GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
BssNAI GTATAC 1 cut(s) 1140
BssNI GRCGYC 2 cut(s) 928, 1276
BssT1I CCWWGG 1 cut(s) 883
Bst1107I GTATAC 1 cut(s) 1140
Bst2UI CCWGG 4 cut(s) 464, 561, 2137, 2673
Bst4CI ACNGT 6 cut(s) 187, 313, 518, 574, 1060, 2710
Bst6I CTCTTC 3 cut(s) 999, 1161, 1951
BstACI GRCGYC 2 cut(s) 928, 1276
BstAFI CTTAAG 1 cut(s) 79
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 5 cut(s) 279, 643, 1291, 1708, 2185
BstDSI CCRYGG 1 cut(s) 781
BstEII GGTNACC 1 cut(s) 2677
BstF5I GGATG 5 cut(s) 84, 248, 561, 1577, 2479
BstFNI CGCG 1 cut(s) 2178
BstH2I RGCGCY 2 cut(s) 1279, 1921
BstHHI GCGC 4 cut(s) 1278, 1791, 1920, 2260
BstKTI GATC 6 cut(s) 667, 1828, 1948, 2173, 2218, 2383
BstMAI GTCTC 6 cut(s) 632, 719, 974, 2054, 2326, 2615
BstMBI GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
BstMCI CGRYCG 1 cut(s) 1175
BstMWI GCNNNNNNNGC 8 cut(s) 188, 266, 745, 799, 1630, 2184, 2264, 2656
BstNI CCWGG 4 cut(s) 464, 561, 2137, 2673
BstNSI RCATGY 1 cut(s) 2168
BstPAI GACNNNNGTC 1 cut(s) 1980
BstPI GGTNACC 1 cut(s) 2677
BstSCI CCNGG 6 cut(s) 462, 559, 1169, 1174, 2135, 2671
BstSFI CTRYAG 5 cut(s) 279, 410, 1095, 1941, 2683
BstUI CGCG 1 cut(s) 2178
BstV1I GCAGC 5 cut(s) 692, 1027, 1642, 1885, 2254
BstV2I GAAGAC 2 cut(s) 385, 1928
BstX2I RGATCY 4 cut(s) 1825, 1945, 2215, 2380
BstXI CCANNNNNNTGG 1 cut(s) 788
BstYI RGATCY 4 cut(s) 1825, 1945, 2215, 2380
BstZ17I GTATAC 1 cut(s) 1140
BstZI CGGCCG 1 cut(s) 1172
BsuRI GGCC 5 cut(s) 780, 1174, 1404, 1817, 2194
BtgI CCRYGG 1 cut(s) 781
BtsCI GGATG 5 cut(s) 84, 248, 561, 1577, 2479
BtsI GCAGTG 1 cut(s) 288
BtsIMutI CAGTG 7 cut(s) 32, 288, 309, 579, 1687, 2523, 2562
BtuMI TCGCGA 1 cut(s) 2178
BveI ACCTGC 2 cut(s) 1576, 2690
Cac8I GCNNGC 5 cut(s) 279, 643, 1291, 1708, 2185
CaiI CAGNNNCTG 2 cut(s) 2123, 2672
CfoI GCGC 4 cut(s) 1278, 1791, 1920, 2260
Cfr10I RCCGGY 2 cut(s) 964, 1664
Cfr13I GGNCC 3 cut(s) 778, 1364, 1816
CseI GACGC 3 cut(s) 921, 936, 2189
Csp6I GTAC 6 cut(s) 423, 868, 1970, 2140, 2392, 2434
CspAI ACCGGT 1 cut(s) 964
CviQI GTAC 6 cut(s) 423, 868, 1970, 2140, 2392, 2434
DinI GGCGCC 1 cut(s) 1277
DpnI GATC 6 cut(s) 666, 1827, 1947, 2172, 2217, 2382
DpnII GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
DrdI GACNNNNNNGTC 1 cut(s) 1852
DseDI GACNNNNNNGTC 1 cut(s) 1852
EaeI YGGCCR 2 cut(s) 1172, 2192
EagI CGGCCG 1 cut(s) 1172
Eam1104I CTCTTC 3 cut(s) 999, 1161, 1951
EarI CTCTTC 3 cut(s) 999, 1161, 1951
EciI GGCGGA 1 cut(s) 414
Ecl136II GAGCTC 2 cut(s) 1558, 2664
EclXI CGGCCG 1 cut(s) 1172
Eco130I CCWWGG 1 cut(s) 883
Eco24I GRGCYC 3 cut(s) 1560, 2040, 2666
Eco31I GGTCTC 1 cut(s) 632
Eco47I GGWCC 1 cut(s) 1364
Eco52I CGGCCG 1 cut(s) 1172
Eco53kI GAGCTC 2 cut(s) 1558, 2664
Eco57I CTGAAG 1 cut(s) 2100
Eco88I CYCGRG 1 cut(s) 1319
Eco91I GGTNACC 1 cut(s) 2677
EcoICRI GAGCTC 2 cut(s) 1558, 2664
EcoO65I GGTNACC 1 cut(s) 2677
EcoRI GAATTC 1 cut(s) 1205
EcoRII CCWGG 4 cut(s) 462, 559, 2135, 2671
EcoT14I CCWWGG 1 cut(s) 883
EcoT38I GRGCYC 3 cut(s) 1560, 2040, 2666
EgeI GGCGCC 1 cut(s) 1277
EheI GGCGCC 1 cut(s) 1277
ErhI CCWWGG 1 cut(s) 883
FalI AAGNNNNNCTT 2 cut(s) 698, 730
FaqI GGGAC 4 cut(s) 799, 1858, 2175, 2291
FauI CCCGC 1 cut(s) 2321
FauNDI CATATG 1 cut(s) 2045
FblI GTMKAC 2 cut(s) 348, 1139
Fnu4HI GCNGC 5 cut(s) 681, 1016, 1631, 1899, 2268
FokI GGATG 5 cut(s) 71, 235, 568, 1564, 2486
FriOI GRGCYC 3 cut(s) 1560, 2040, 2666
Fsp4HI GCNGC 5 cut(s) 681, 1016, 1631, 1899, 2268
FspBI CTAG 7 cut(s) 909, 996, 1259, 1346, 1430, 1478, 2184
GlaI GCGC 4 cut(s) 1277, 1790, 1919, 2259
GluI GCNGC 5 cut(s) 681, 1016, 1631, 1899, 2268
GsaI CCCAGC 2 cut(s) 738, 2634
HaeII RGCGCY 2 cut(s) 1279, 1921
HaeIII GGCC 5 cut(s) 780, 1174, 1404, 1817, 2194
HapII CCGG 9 cut(s) 965, 1171, 1175, 1486, 1665, 1839, 2357, 2471, 2614
HgaI GACGC 3 cut(s) 921, 936, 2189
HhaI GCGC 4 cut(s) 1278, 1791, 1920, 2260
Hin1I GRCGYC 2 cut(s) 928, 1276
Hin6I GCGC 4 cut(s) 1276, 1789, 1918, 2258
HinP1I GCGC 4 cut(s) 1276, 1789, 1918, 2258
HincII GTYRAC 1 cut(s) 349
HindII GTYRAC 1 cut(s) 349
HindIII AAGCTT 2 cut(s) 1491, 1769
HpaII CCGG 9 cut(s) 965, 1171, 1175, 1486, 1665, 1839, 2357, 2471, 2614
HphI GGTGA 7 cut(s) 515, 890, 954, 979, 2224, 2460, 2631
Hpy166II GTNNAC 6 cut(s) 349, 541, 634, 898, 1140, 1201
Hpy188III TCNNGA 9 cut(s) 851, 979, 1370, 1478, 1519, 1907, 2012, 2177, 2614
Hpy8I GTNNAC 6 cut(s) 349, 541, 634, 898, 1140, 1201
Hpy99I CGWCG 2 cut(s) 127, 2183
HpyAV CCTTC 6 cut(s) 108, 325, 617, 1105, 1795, 1925
HpyCH4III ACNGT 6 cut(s) 187, 313, 518, 574, 1060, 2710
HpyF10VI GCNNNNNNNGC 8 cut(s) 188, 266, 745, 799, 1630, 2184, 2264, 2656
Hsp92I GRCGYC 2 cut(s) 928, 1276
HspAI GCGC 4 cut(s) 1276, 1789, 1918, 2258
KasI GGCGCC 1 cut(s) 1275
Kpn2I TCCGGA 1 cut(s) 2613
Kzo9I GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
LmnI GCTCC 5 cut(s) 401, 563, 760, 1658, 2043
Lsp1109I GCAGC 5 cut(s) 692, 1027, 1642, 1885, 2254
LweI GCATC 6 cut(s) 23, 93, 546, 1586, 1597, 1651
MaeI CTAG 7 cut(s) 909, 996, 1259, 1346, 1430, 1478, 2184
MalI GATC 6 cut(s) 666, 1827, 1947, 2172, 2217, 2382
MboI GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
MfeI CAATTG 2 cut(s) 1602, 2055
MflI RGATCY 4 cut(s) 1825, 1945, 2215, 2380
MhlI GDGCHC 5 cut(s) 226, 406, 1560, 2040, 2666
MlsI TGGCCA 1 cut(s) 2194
MluNI TGGCCA 1 cut(s) 2194
Mly113I GGCGCC 1 cut(s) 1276
MlyI GAGTC 4 cut(s) 150, 536, 968, 1862
MmeI TCCRAC 2 cut(s) 959, 1021
Mox20I TGGCCA 1 cut(s) 2194
MroI TCCGGA 1 cut(s) 2613
MroXI GAANNNNTTC 1 cut(s) 1935
MscI TGGCCA 1 cut(s) 2194
MseI TTAA 7 cut(s) 80, 204, 615, 1232, 1304, 2082, 2507
MslI CAYNNNNRTG 1 cut(s) 572
Msp20I TGGCCA 1 cut(s) 2194
MspA1I CMGCKG 2 cut(s) 734, 2519
MspCI CTTAAG 1 cut(s) 79
MspI CCGG 9 cut(s) 965, 1171, 1175, 1486, 1665, 1839, 2357, 2471, 2614
MspR9I CCNGG 6 cut(s) 464, 561, 1171, 1176, 2137, 2673
MunI CAATTG 2 cut(s) 1602, 2055
MvaI CCWGG 4 cut(s) 464, 561, 2137, 2673
MvnI CGCG 1 cut(s) 2178
MwoI GCNNNNNNNGC 8 cut(s) 188, 266, 745, 799, 1630, 2184, 2264, 2656
NarI GGCGCC 1 cut(s) 1276
NciI CCSGG 2 cut(s) 1171, 1176
NdeI CATATG 1 cut(s) 2045
NdeII GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
NheI GCTAGC 1 cut(s) 2183
NlaIV GGNNCC 5 cut(s) 565, 779, 1277, 2039, 2382
NmeAIII GCCGAG 2 cut(s) 2436, 2685
NmuCI GTSAC 4 cut(s) 283, 307, 960, 2110
NruI TCGCGA 1 cut(s) 2178
NspI RCATGY 1 cut(s) 2168
NspV TTCGAA 1 cut(s) 291
PaeR7I CTCGAG 1 cut(s) 1319
PdmI GAANNNNTTC 1 cut(s) 1935
PfeI GAWTC 8 cut(s) 199, 490, 690, 766, 1145, 1373, 1571, 2603
PflFI GACNNNGTC 1 cut(s) 915
PflMI CCANNNNNTGG 1 cut(s) 2244
PinAI ACCGGT 1 cut(s) 964
PkrI GCNGC 5 cut(s) 682, 1017, 1632, 1900, 2269
PleI GAGTC 4 cut(s) 149, 536, 967, 1861
PluTI GGCGCC 1 cut(s) 1279
PpsI GAGTC 4 cut(s) 149, 536, 967, 1861
PshAI GACNNNNGTC 1 cut(s) 1980
PsiI TTATAA 2 cut(s) 834, 1724
Psp124BI GAGCTC 2 cut(s) 1560, 2666
Psp6I CCWGG 4 cut(s) 462, 559, 2135, 2671
PspEI GGTNACC 1 cut(s) 2677
PspFI CCCAGC 2 cut(s) 734, 2630
PspGI CCWGG 4 cut(s) 462, 559, 2135, 2671
PspN4I GGNNCC 5 cut(s) 565, 779, 1277, 2039, 2382
PspPI GGNCC 3 cut(s) 778, 1364, 1816
PspXI VCTCGAGB 1 cut(s) 1319
PstI CTGCAG 4 cut(s) 283, 1099, 1945, 2687
PstNI CAGNNNCTG 2 cut(s) 2123, 2672
PsuI RGATCY 4 cut(s) 1825, 1945, 2215, 2380
PsyI GACNNNGTC 1 cut(s) 915
PvuII CAGCTG 2 cut(s) 734, 2519
RruI TCGCGA 1 cut(s) 2178
RsaI GTAC 6 cut(s) 424, 869, 1971, 2141, 2393, 2435
RsaNI GTAC 6 cut(s) 423, 868, 1970, 2140, 2392, 2434
RseI CAYNNNNRTG 1 cut(s) 572
SacI GAGCTC 2 cut(s) 1560, 2666
SalI GTCGAC 1 cut(s) 347
SaqAI TTAA 7 cut(s) 80, 204, 615, 1232, 1304, 2082, 2507
SatI GCNGC 5 cut(s) 681, 1016, 1631, 1899, 2268
Sau3AI GATC 6 cut(s) 664, 1825, 1945, 2170, 2215, 2380
Sau96I GGNCC 3 cut(s) 778, 1364, 1816
ScaI AGTACT 2 cut(s) 424, 2393
SchI GAGTC 4 cut(s) 150, 536, 968, 1862
ScrFI CCNGG 6 cut(s) 464, 561, 1171, 1176, 2137, 2673
SduI GDGCHC 5 cut(s) 226, 406, 1560, 2040, 2666
SfaNI GCATC 6 cut(s) 23, 93, 546, 1586, 1597, 1651
SfcI CTRYAG 5 cut(s) 279, 410, 1095, 1941, 2683
SfoI GGCGCC 1 cut(s) 1277
Sfr274I CTCGAG 1 cut(s) 1319
SfuI TTCGAA 1 cut(s) 291
SgrAI CRCCGGYG 1 cut(s) 964
SinI GGWCC 1 cut(s) 1364
SlaI CTCGAG 1 cut(s) 1319
SmiMI CAYNNNNRTG 1 cut(s) 572
SmlI CTYRAG 5 cut(s) 79, 1237, 1319, 1368, 1382
SmoI CTYRAG 5 cut(s) 79, 1237, 1319, 1368, 1382
SsiI CCGC 5 cut(s) 236, 399, 1063, 2314, 2460
SspDI GGCGCC 1 cut(s) 1275
SspI AATATT 1 cut(s) 322
SspMI CTAG 7 cut(s) 909, 996, 1259, 1346, 1430, 1478, 2184
SstI GAGCTC 2 cut(s) 1560, 2666
StyD4I CCNGG 6 cut(s) 462, 559, 1169, 1174, 2135, 2671
StyI CCWWGG 1 cut(s) 883
TaaI ACNGT 6 cut(s) 187, 313, 518, 574, 1060, 2710
TaqI TCGA 9 cut(s) 122, 144, 291, 348, 919, 978, 1320, 1851, 1906
TaqII GACCGA 1 cut(s) 959
TatI WGTACW 4 cut(s) 422, 867, 2391, 2433
TfiI GAWTC 8 cut(s) 199, 490, 690, 766, 1145, 1373, 1571, 2603
Tru1I TTAA 7 cut(s) 80, 204, 615, 1232, 1304, 2082, 2507
Tru9I TTAA 7 cut(s) 80, 204, 615, 1232, 1304, 2082, 2507
TscAI CASTG 7 cut(s) 39, 288, 316, 579, 1694, 2530, 2562
TseFI GTSAC 4 cut(s) 283, 307, 960, 2110
TseI GCWGC 5 cut(s) 680, 1015, 1630, 1898, 2267
Tsp45I GTSAC 4 cut(s) 283, 307, 960, 2110
TspRI CASTG 7 cut(s) 39, 288, 316, 579, 1694, 2530, 2562
Tth111I GACNNNGTC 1 cut(s) 915
Van91I CCANNNNNTGG 1 cut(s) 2244
Vha464I CTTAAG 1 cut(s) 79
VpaK11BI GGWCC 1 cut(s) 1364
XapI RAATTY 4 cut(s) 1185, 1205, 1214, 2147
XbaI TCTAGA 1 cut(s) 1477
XceI RCATGY 1 cut(s) 2168
XcmI CCANNNNNNNNNTGG 1 cut(s) 1879
XhoI CTCGAG 1 cut(s) 1319
XmiI GTMKAC 2 cut(s) 348, 1139
XmnI GAANNNNTTC 1 cut(s) 1935
XspI CTAG 7 cut(s) 909, 996, 1259, 1346, 1430, 1478, 2184
ZrmI AGTACT 2 cut(s) 424, 2393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.