Rh5BG062100

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
5116644 .. 5120330
3687 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG062100.1

Sequence Viewer

Length: 2823 bp
ATGGCAGGAAACATTATGGACACATTTGCAGTAGAAGCATTACCTCTGAATATTAAGAGGCATCATTATAACATGCACCCTTCTAGTTTCGCCATTAATTTCATTTGTTCAACGAAGAGGAGATGGCATCCAAGTGAGAGAAGGAAAATGGCGGCCGCTCGTGCTCGTTCGGATCATATACCAGCATCCACCGCCTTTGCTGTTGGAGTTGCTGCAGAGAACGAGAAGCAGCAGCCTTTGGAACTCGCAGCCGGATCCGTTGATGTTGTAGTTGATGCGGCTTCAGAGAATGTGAAGCAGCAGCCTGCAGTGACTTTGGAACTCACTGCACTAGTCACTGTCAAAAGGAAAAGTGAAAATAAGTTAAATACCATGAAAGAGATGATGCTTAGGCGGTTTGGCAATTATGCTTCACCTAATGGCCATGGTGATCATCATAATCACAAGGGTGTTGTCCTACAGCTTGTTAGTACTCAAATCCACACAAAGGAAATGAAGCCAAAGCTGAGTGAGGAAGCTATATTGGATTGGACAAAGAATTTGAAAATGGGTGCTGGGAAGACCAGTACTTACCAAGTTAAATTTGTGGTGGATTCTAACTTTGGGATGCCAGGAGCCATCACGGTTAGCAACAGAGACCAGAGCGAGTTCTATTTGGATAGCATCAACATTGAAGGTGTTATTCATTTTGCCTGCAACTCTTGGGTTCAACCAGAGTGCGAAAACCCTGCAAAAAGAATCTTCTTCTCTACCAATAAGGCATACTTACCTAGTGAAACACCAGCAGGGCTGAAAGAACTAAGAAAAATGGAGCTAACTCAACTGAGGGGTGATGGAACAGGATTTCGAAAACCATCTGATAGAATATACGACTATGACACTTACAATGACATTGGAAATCCAGATCTGGGAAATGGATACATAAGGCCCATCCTTGGAGGCAACAAACAGCCACACCCAAGACGCTGTCGAACTGGAAGGCCTCGAACCAAGACAGATGAGAATCTGGAATCACCAGTAAATGAATTCCTGATGGCCTATGTACCTAGAGATGAAGAGTTTAAGGAGTCCAAGATAGAATCTCTTGATCTTGGAAAGTTAAAGGCTATTCTGAGGCTCATTATTCCTACACTAACAACAGTCGCCAGGAATACTGATGTTTTCGAGGTCCATTCAGATATCAGAGATTTGTATAGGGATATATCTTCGGTCGAAATGAACACTAAGATGAATCTTTCATGGGAAAATATATTGAACAAAGTTCAGGGATTCCTCAAATTCGATCCTACAAAGTTAGACAAAAGGATTACATCTTGTTGTTTCCCAGATGACGAGTTTGGCCGTCAAGCAGTTGCAGGCATAAACCCTCTAAGCATAGAGAGGCTGACAACTTTCCCACCTGTAAGCAAACTGAATGCCTCAACTTATGGCCCACAAGAATCGGCACTCAAGGAAGAACATATACTAGGCCATCTAAATGGCATGTCTGTGCAACAGGCATTGGAAGAAAACAAGCTGTTCATACTAGACTATCATGACATTTTCCTTCCGTTTATCAACCAAATAAATGCTATGGATGACCGAAAAGCTTATGCAACACGTACAATTTTCTTCCTCACCCCATTGGGAACATTGAAGCCCATTGCTATTGAGCTCAGTCTCCAACAAACCAATTCAAATTCACCATCCAGGCAGGTTCTCACTCCTCCAGTTGATGCTACAACATATTGGCTTTGGGAACTTGGCAAAGCCCATGTATGCTCCAATGATTCCTGCGTTCATCAACTCATTAATCACTGGTTACGCTCCCATGCGTGTATGGAACCATTTATCATAGCAACTCACCGGCAGCTGAGTGCGATGCATCCCGTCTATAGACTTCTCAAGCCTCACATTCGATACACAATGAAGATAAATGCATTGGCCCGTCAGTTTCTGATCAATTCTGAAGGAATAATTGAGTCTACTTTTACTGCTGGCAAACATAGCATGGAGATTAGTTGTGCTGCATATCGAGACTGGTGGCGTTTTGACCTTGAGGGCCTTCCTGCAGATCTCATTAGAAGAGGAATAGCAATACCAGACCCCGGTCAGGTCCATGGACTAAGACTACTGATCGAAGATTATCCTTACGCAACAGATGGGTTCCTCATATGGTCAGCAATTGAGAGATTGGTTCAAACCTATGTCCATTATTACTATCCTGATGCAAGTATGGTTCATTCTGATACAGAACTGCAAGCCTGGTACAAGGAATGGATCAATTCAGGCCATGCAGACCTTCGCCATGCTAGCTGGTGGCCAAAACTCTCTACTCCAGATGATCTTGCCTCCATTCTCACCACCATCATTTGGCTCTCATCAGCATACCACGCAGCATTGAACTATGGGCAGTATCCATATGGCGGATATGTCCCAGCCCGCCCACCACACATGCGGAGACTACTGCCACAAGAGCATGAACTAGAGTATGCTACTTTCATTAAGGATCCAGAGAAATATTTTCTATCGTCATTGCCAAATTTACTCGAAACAATAAAATATATGGCTGTGCTAGATATCATCTCAGCGCACTCCCCGGATGAGGAGTATATTGCGGAAAGAAAAGACTTGTCCACTTGGTCAGCTGACCCAGTTATCATTGAGGCATTCTACAGATTTTCTATGGATATGAGGAGGATTGAAAAGGAGATTGAACGAAGAAATGCCGATTCAAGACTGCGTAACAGATGTGGGGCAGGGATTCCACCATACGAGCTGCTCATGCCAAGCTCAGAACCTGGGGTTACAGCCAGAGGAGTGCCTAATAGTATATCAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

940

Amino Acids

106.92

Weight (kDa)

6.82

Isoelectric Point (pI)

56.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 168 - 249 2e-08 PLAT/LH2 domain
Lipoxygenase PF00305 263 - 923 5e-284 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 69
Acc36I ACCTGC 1 cut(s) 1684
AccB7I CCANNNNNTGG 1 cut(s) 2352
AccBSI CCGCTC 1 cut(s) 158
AccI GTMKAC 1 cut(s) 1964
AciI CCGC 9 cut(s) 152, 156, 192, 278, 394, 2406, 2422, 2437, 2597
AclWI GGATC 7 cut(s) 180, 249, 262, 1277, 2267, 2483, 2496
AcoI YGGCCR 4 cut(s) 153, 421, 1339, 2300
AcsI RAATTY 6 cut(s) 538, 581, 1025, 1277, 1678, 2521
AcuI CTGAAG 2 cut(s) 267, 1968
AfaI GTAC 5 cut(s) 472, 568, 1044, 1603, 2249
AfiI CCNNNNNNNGG 8 cut(s) 487, 908, 935, 2087, 2092, 2352, 2405, 2584
AflIII ACRYGT 1 cut(s) 1598
AhlI ACTAGT 1 cut(s) 331
AjnI CCWGG 5 cut(s) 610, 1145, 1688, 2243, 2779
AleI CACNNNNGTG 1 cut(s) 447
Alw21I GWGCWC 2 cut(s) 166, 1656
Alw26I GTCTC 4 cut(s) 630, 1664, 2010, 2434
AlwI GGATC 7 cut(s) 180, 249, 262, 1277, 2267, 2483, 2496
AlwNI CAGNNNCTG 2 cut(s) 1936, 2780
ApoI RAATTY 6 cut(s) 538, 581, 1025, 1277, 1678, 2521
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AseI ATTAAT 2 cut(s) 96, 1791
AspLEI GCGC 1 cut(s) 2572
AspS9I GGNCC 6 cut(s) 927, 1168, 1430, 1924, 2041, 2095
AsuC2I CCSGG 2 cut(s) 2088, 2579
AsuHPI GGTGA 8 cut(s) 405, 440, 842, 1005, 1609, 1674, 1835, 2332
AsuII TTCGAA 1 cut(s) 847
AsuNHI GCTAGC 1 cut(s) 2291
AvaII GGWCC 2 cut(s) 1168, 2095
BalI TGGCCA 2 cut(s) 423, 2302
BamHI GGATCC 2 cut(s) 254, 2488
BanII GRGCYC 1 cut(s) 1656
BarI GAAGNNNNNNTAC 2 cut(s) 1446, 1478
BauI CACGAG 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 566
Bbv12I GWGCWC 2 cut(s) 166, 1656
BceAI ACGGC 1 cut(s) 1326
BcgI CGANNNNNNTGC 2 cut(s) 710, 744
BciT130I CCWGG 5 cut(s) 612, 1147, 1690, 2245, 2781
BciVI GTATCC 2 cut(s) 911, 2406
BclI TGATCA 2 cut(s) 430, 1938
BcnI CCSGG 2 cut(s) 2088, 2579
BcoDI GTCTC 4 cut(s) 630, 1664, 2010, 2434
BcuI ACTAGT 1 cut(s) 331
BfaI CTAG 9 cut(s) 84, 332, 771, 1047, 1466, 1526, 2292, 2465, 2555
BfmI CTRYAG 6 cut(s) 213, 306, 458, 1873, 2049, 2653
BfuAI ACCTGC 1 cut(s) 1684
BfuI GTATCC 2 cut(s) 911, 2406
BglII AGATCT 2 cut(s) 904, 2053
BmcAI AGTACT 2 cut(s) 472, 568
Bme1390I CCNGG 7 cut(s) 612, 1147, 1690, 2088, 2245, 2579, 2781
Bme18I GGWCC 2 cut(s) 1168, 2095
BmgT120I GGNCC 6 cut(s) 927, 1168, 1430, 1924, 2041, 2095
BmiI GGNNCC 5 cut(s) 256, 616, 1824, 2147, 2490
BmrFI CCNGG 7 cut(s) 612, 1147, 1690, 2088, 2245, 2579, 2781
BmrI ACTGGG 1 cut(s) 2627
BmtI GCTAGC 1 cut(s) 2295
BmuI ACTGGG 1 cut(s) 2627
BoxI GACNNNNGTC 1 cut(s) 2088
BpiI GAAGAC 1 cut(s) 566
BpmI CTGGAG 2 cut(s) 1692, 2301
Bpu10I CCTNAGC 1 cut(s) 389
Bpu14I TTCGAA 1 cut(s) 847
BpuEI CTTGAG 3 cut(s) 1433, 1868, 2057
BpuMI CCSGG 2 cut(s) 2088, 2579
BsaAI YACGTR 1 cut(s) 1601
BsaBI GATNNNNATC 1 cut(s) 1002
BsaI GGTCTC 1 cut(s) 630
BsaJI CCNNGG 6 cut(s) 424, 934, 2086, 2098, 2577, 2780
Bsc4I CCNNNNNNNGG 8 cut(s) 487, 908, 935, 2087, 2092, 2352, 2405, 2584
Bse118I RCCGGY 1 cut(s) 1845
Bse1I ACTGG 7 cut(s) 564, 979, 1016, 1709, 1802, 2024, 2633
Bse3DI GCAATG 2 cut(s) 1641, 2513
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 5 cut(s) 612, 1147, 1690, 2245, 2781
BseDI CCNNGG 6 cut(s) 424, 934, 2086, 2098, 2577, 2780
BseGI GGATG 8 cut(s) 127, 185, 612, 930, 1582, 1685, 1864, 2587
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 8 cut(s) 487, 908, 935, 2087, 2092, 2352, 2405, 2584
BseMI GCAATG 2 cut(s) 1641, 2513
BseMII CTCAG 7 cut(s) 497, 815, 1103, 1669, 1844, 2580, 2787
BseNI ACTGG 7 cut(s) 564, 979, 1016, 1709, 1802, 2024, 2633
BseRI GAGGAG 5 cut(s) 133, 1695, 2600, 2689, 2811
BseX3I CGGCCG 1 cut(s) 153
BseYI CCCAGC 2 cut(s) 554, 2416
BsgI GTGCAG 1 cut(s) 312
Bsh1285I CGRYCG 2 cut(s) 156, 1212
BsiEI CGRYCG 2 cut(s) 156, 1212
BsiHKAI GWGCWC 2 cut(s) 166, 1656
BsiSI CCGG 4 cut(s) 252, 1846, 2088, 2579
BslFI GGGAC 1 cut(s) 2399
BslI CCNNNNNNNGG 8 cut(s) 487, 908, 935, 2087, 2092, 2352, 2405, 2584
BsmAI GTCTC 4 cut(s) 630, 1664, 2010, 2434
BsmFI GGGAC 1 cut(s) 2399
BsmI GAATGC 2 cut(s) 1420, 2648
Bso31I GGTCTC 1 cut(s) 630
Bsp119I TTCGAA 1 cut(s) 847
Bsp1286I GDGCHC 2 cut(s) 166, 1656
Bsp19I CCATGG 2 cut(s) 424, 2098
BspACI CCGC 9 cut(s) 152, 156, 192, 278, 394, 2406, 2422, 2437, 2597
BspCNI CTCAG 7 cut(s) 498, 816, 1104, 1668, 1845, 2579, 2786
BspHI TCATGA 1 cut(s) 1534
BspLI GGNNCC 5 cut(s) 256, 616, 1824, 2147, 2490
BspMAI CTGCAG 3 cut(s) 217, 310, 2053
BspMI ACCTGC 1 cut(s) 1684
BspOI GCTAGC 1 cut(s) 2295
BspPI GGATC 7 cut(s) 180, 249, 262, 1277, 2267, 2483, 2496
BspT104I TTCGAA 1 cut(s) 847
BspTNI GGTCTC 1 cut(s) 630
BsrBI CCGCTC 1 cut(s) 158
BsrDI GCAATG 2 cut(s) 1641, 2513
BsrFI RCCGGY 1 cut(s) 1845
BsrI ACTGG 7 cut(s) 564, 979, 1016, 1709, 1802, 2024, 2633
BssAI RCCGGY 1 cut(s) 1845
BssECI CCNNGG 6 cut(s) 424, 934, 2086, 2098, 2577, 2780
BssSI CACGAG 1 cut(s) 159
BssT1I CCWWGG 3 cut(s) 424, 934, 2098
Bst2BI CACGAG 1 cut(s) 159
Bst2UI CCWGG 5 cut(s) 612, 1147, 1690, 2245, 2781
Bst4CI ACNGT 3 cut(s) 340, 625, 1141
Bst6I CTCTTC 3 cut(s) 110, 1050, 2059
BstBAI YACGTR 1 cut(s) 1601
BstBI TTCGAA 1 cut(s) 847
BstC8I GCNNGC 7 cut(s) 306, 694, 1357, 1978, 2241, 2293, 2422
BstDSI CCRYGG 2 cut(s) 424, 2098
BstF5I GGATG 8 cut(s) 127, 185, 612, 930, 1582, 1685, 1864, 2587
BstHHI GCGC 1 cut(s) 2572
BstMAI GTCTC 4 cut(s) 630, 1664, 2010, 2434
BstMCI CGRYCG 2 cut(s) 156, 1212
BstMWI GCNNNNNNNGC 8 cut(s) 35, 161, 191, 1986, 2292, 2372, 2455, 2764
BstNI CCWGG 5 cut(s) 612, 1147, 1690, 2245, 2781
BstNSI RCATGY 3 cut(s) 76, 1486, 2437
BstPAI GACNNNNGTC 1 cut(s) 2088
BstSCI CCNGG 7 cut(s) 610, 1145, 1688, 2086, 2243, 2577, 2779
BstSFI CTRYAG 6 cut(s) 213, 306, 458, 1873, 2049, 2653
BstV2I GAAGAC 1 cut(s) 566
BstX2I RGATCY 4 cut(s) 254, 904, 2053, 2488
BstXI CCANNNNNNTGG 1 cut(s) 1478
BstYI RGATCY 4 cut(s) 254, 904, 2053, 2488
BstZI CGGCCG 1 cut(s) 153
BsuI GTATCC 2 cut(s) 911, 2406
BtgI CCRYGG 2 cut(s) 424, 2098
BtgZI GCGATG 1 cut(s) 1874
BtsCI GGATG 8 cut(s) 127, 185, 612, 930, 1582, 1685, 1864, 2587
BtsI GCAGTG 2 cut(s) 315, 324
BtsIMutI CAGTG 4 cut(s) 315, 324, 336, 1795
BveI ACCTGC 1 cut(s) 1684
Cac8I GCNNGC 7 cut(s) 306, 694, 1357, 1978, 2241, 2293, 2422
CaiI CAGNNNCTG 2 cut(s) 1936, 2780
CciI TCATGA 1 cut(s) 1534
CciNI GCGGCCGC 1 cut(s) 153
CfoI GCGC 1 cut(s) 2572
Cfr10I RCCGGY 1 cut(s) 1845
Cfr13I GGNCC 6 cut(s) 927, 1168, 1430, 1924, 2041, 2095
CseI GACGC 1 cut(s) 972
Csp6I GTAC 5 cut(s) 471, 567, 1043, 1602, 2248
CspCI CAANNNNNGTGG 2 cut(s) 178, 213
CviQI GTAC 5 cut(s) 471, 567, 1043, 1602, 2248
EaeI YGGCCR 4 cut(s) 153, 421, 1339, 2300
EagI CGGCCG 1 cut(s) 153
Eam1104I CTCTTC 3 cut(s) 110, 1050, 2059
EarI CTCTTC 3 cut(s) 110, 1050, 2059
EciI GGCGGA 1 cut(s) 2421
Ecl136II GAGCTC 1 cut(s) 1654
EclXI CGGCCG 1 cut(s) 153
Eco130I CCWWGG 3 cut(s) 424, 934, 2098
Eco147I AGGCCT 1 cut(s) 982
Eco24I GRGCYC 1 cut(s) 1656
Eco31I GGTCTC 1 cut(s) 630
Eco32I GATATC 2 cut(s) 1180, 2560
Eco47I GGWCC 2 cut(s) 1168, 2095
Eco52I CGGCCG 1 cut(s) 153
Eco53kI GAGCTC 1 cut(s) 1654
Eco57I CTGAAG 2 cut(s) 267, 1968
EcoICRI GAGCTC 1 cut(s) 1654
EcoO109I RGGNCCY 1 cut(s) 2041
EcoRI GAATTC 1 cut(s) 1025
EcoRII CCWGG 5 cut(s) 610, 1145, 1688, 2243, 2779
EcoRV GATATC 2 cut(s) 1180, 2560
EcoT14I CCWWGG 3 cut(s) 424, 934, 2098
EcoT22I ATGCAT 2 cut(s) 1866, 1921
EcoT38I GRGCYC 1 cut(s) 1656
ErhI CCWWGG 3 cut(s) 424, 934, 2098
FalI AAGNNNNNCTT 2 cut(s) 749, 781
FaqI GGGAC 1 cut(s) 2399
FauI CCCGC 1 cut(s) 2429
FauNDI CATATG 2 cut(s) 2153, 2401
FbaI TGATCA 2 cut(s) 430, 1938
FblI GTMKAC 1 cut(s) 1964
FokI GGATG 8 cut(s) 114, 172, 619, 917, 1589, 1672, 1851, 2594
FriOI GRGCYC 1 cut(s) 1656
FspBI CTAG 9 cut(s) 84, 332, 771, 1047, 1466, 1526, 2292, 2465, 2555
GlaI GCGC 1 cut(s) 2571
GsaI CCCAGC 2 cut(s) 558, 2420
GsuI CTGGAG 2 cut(s) 1692, 2301
HapII CCGG 4 cut(s) 252, 1846, 2088, 2579
HgaI GACGC 1 cut(s) 972
HhaI GCGC 1 cut(s) 2572
Hin6I GCGC 1 cut(s) 2570
HinP1I GCGC 1 cut(s) 2570
HindIII AAGCTT 1 cut(s) 1587
HpaII CCGG 4 cut(s) 252, 1846, 2088, 2579
HphI GGTGA 8 cut(s) 405, 440, 842, 1005, 1609, 1674, 1835, 2332
Hpy166II GTNNAC 2 cut(s) 1965, 2616
Hpy8I GTNNAC 2 cut(s) 1965, 2616
HpyAV CCTTC 8 cut(s) 90, 135, 668, 972, 1556, 1943, 2054, 2291
HpyCH4III ACNGT 3 cut(s) 340, 625, 1141
HpyCH4IV ACGT 1 cut(s) 1600
HpyF10VI GCNNNNNNNGC 8 cut(s) 35, 161, 191, 1986, 2292, 2372, 2455, 2764
HpySE526I ACGT 1 cut(s) 1600
HspAI GCGC 1 cut(s) 2570
Ksp22I TGATCA 2 cut(s) 430, 1938
LmnI GCTCC 4 cut(s) 614, 811, 1766, 1811
MaeI CTAG 9 cut(s) 84, 332, 771, 1047, 1466, 1526, 2292, 2465, 2555
MaeII ACGT 1 cut(s) 1600
MaeIII GTNAC 5 cut(s) 310, 334, 1800, 2723, 2785
MbiI CCGCTC 1 cut(s) 158
MfeI CAATTG 1 cut(s) 2163
MflI RGATCY 4 cut(s) 254, 904, 2053, 2488
MhlI GDGCHC 2 cut(s) 166, 1656
MlsI TGGCCA 2 cut(s) 423, 2302
MluNI TGGCCA 2 cut(s) 423, 2302
MlyI GAGTC 2 cut(s) 1076, 1970
MmeI TCCRAC 2 cut(s) 184, 1687
Mox20I TGGCCA 2 cut(s) 423, 2302
Mph1103I ATGCAT 2 cut(s) 1866, 1921
MscI TGGCCA 2 cut(s) 423, 2302
MseI TTAA 9 cut(s) 54, 96, 365, 579, 1062, 1100, 1791, 2484, 2821
MslI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
Msp20I TGGCCA 2 cut(s) 423, 2302
MspA1I CMGCKG 2 cut(s) 1852, 2627
MspI CCGG 4 cut(s) 252, 1846, 2088, 2579
MspR9I CCNGG 7 cut(s) 612, 1147, 1690, 2088, 2245, 2579, 2781
MunI CAATTG 1 cut(s) 2163
Mva1269I GAATGC 2 cut(s) 1420, 2648
MvaI CCWGG 5 cut(s) 612, 1147, 1690, 2245, 2781
MwoI GCNNNNNNNGC 8 cut(s) 35, 161, 191, 1986, 2292, 2372, 2455, 2764
NciI CCSGG 2 cut(s) 2088, 2579
NcoI CCATGG 2 cut(s) 424, 2098
NdeI CATATG 2 cut(s) 2153, 2401
NheI GCTAGC 1 cut(s) 2291
NlaIV GGNNCC 5 cut(s) 256, 616, 1824, 2147, 2490
NmuCI GTSAC 2 cut(s) 310, 334
NotI GCGGCCGC 1 cut(s) 153
NsiI ATGCAT 2 cut(s) 1866, 1921
NspI RCATGY 3 cut(s) 76, 1486, 2437
NspV TTCGAA 1 cut(s) 847
OliI CACNNNNGTG 1 cut(s) 447
PagI TCATGA 1 cut(s) 1534
PceI AGGCCT 1 cut(s) 982
PctI GAATGC 2 cut(s) 1420, 2648
PflFI GACNNNGTC 1 cut(s) 966
PflMI CCANNNNNTGG 1 cut(s) 2352
PleI GAGTC 2 cut(s) 1075, 1969
PpsI GAGTC 2 cut(s) 1075, 1969
Ppu21I YACGTR 1 cut(s) 1601
PshAI GACNNNNGTC 1 cut(s) 2088
PshBI ATTAAT 2 cut(s) 96, 1791
PsiI TTATAA 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 1656
Psp6I CCWGG 5 cut(s) 610, 1145, 1688, 2243, 2779
PspFI CCCAGC 2 cut(s) 554, 2416
PspGI CCWGG 5 cut(s) 610, 1145, 1688, 2243, 2779
PspN4I GGNNCC 5 cut(s) 256, 616, 1824, 2147, 2490
PspPI GGNCC 6 cut(s) 927, 1168, 1430, 1924, 2041, 2095
PstI CTGCAG 3 cut(s) 217, 310, 2053
PstNI CAGNNNCTG 2 cut(s) 1936, 2780
PsuI RGATCY 4 cut(s) 254, 904, 2053, 2488
PsyI GACNNNGTC 1 cut(s) 966
PvuII CAGCTG 2 cut(s) 1852, 2627
RsaI GTAC 5 cut(s) 472, 568, 1044, 1603, 2249
RsaNI GTAC 5 cut(s) 471, 567, 1043, 1602, 2248
RseI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
SacI GAGCTC 1 cut(s) 1656
SaqAI TTAA 9 cut(s) 54, 96, 365, 579, 1062, 1100, 1791, 2484, 2821
Sau96I GGNCC 6 cut(s) 927, 1168, 1430, 1924, 2041, 2095
ScaI AGTACT 2 cut(s) 472, 568
SchI GAGTC 2 cut(s) 1076, 1970
ScrFI CCNGG 7 cut(s) 612, 1147, 1690, 2088, 2245, 2579, 2781
SduI GDGCHC 2 cut(s) 166, 1656
SfcI CTRYAG 6 cut(s) 213, 306, 458, 1873, 2049, 2653
SfuI TTCGAA 1 cut(s) 847
SinI GGWCC 2 cut(s) 1168, 2095
SmiMI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
SmlI CTYRAG 3 cut(s) 1448, 1883, 2036
SmoI CTYRAG 3 cut(s) 1448, 1883, 2036
SpeI ACTAGT 1 cut(s) 331
SseBI AGGCCT 1 cut(s) 982
SsiI CCGC 9 cut(s) 152, 156, 192, 278, 394, 2406, 2422, 2437, 2597
SspI AATATT 2 cut(s) 52, 2501
SspMI CTAG 9 cut(s) 84, 332, 771, 1047, 1466, 1526, 2292, 2465, 2555
SstI GAGCTC 1 cut(s) 1656
StuI AGGCCT 1 cut(s) 982
StyD4I CCNGG 7 cut(s) 610, 1145, 1688, 2086, 2243, 2577, 2779
StyI CCWWGG 3 cut(s) 424, 934, 2098
TaaI ACNGT 3 cut(s) 340, 625, 1141
TaiI ACGT 1 cut(s) 1603
TaqII GACCGA 2 cut(s) 1198, 1596
TatI WGTACW 2 cut(s) 470, 566
TauI GCSGC 3 cut(s) 155, 158, 281
Tru1I TTAA 9 cut(s) 54, 96, 365, 579, 1062, 1100, 1791, 2484, 2821
Tru9I TTAA 9 cut(s) 54, 96, 365, 579, 1062, 1100, 1791, 2484, 2821
TscAI CASTG 4 cut(s) 315, 331, 343, 1802
TseFI GTSAC 2 cut(s) 310, 334
Tsp45I GTSAC 2 cut(s) 310, 334
TspGWI ACGGA 2 cut(s) 247, 1539
TspRI CASTG 4 cut(s) 315, 331, 343, 1802
Tth111I GACNNNGTC 1 cut(s) 966
Van91I CCANNNNNTGG 1 cut(s) 2352
VpaK11BI GGWCC 2 cut(s) 1168, 2095
VspI ATTAAT 2 cut(s) 96, 1791
XapI RAATTY 6 cut(s) 538, 581, 1025, 1277, 1678, 2521
XceI RCATGY 3 cut(s) 76, 1486, 2437
XmiI GTMKAC 1 cut(s) 1964
XspI CTAG 9 cut(s) 84, 332, 771, 1047, 1466, 1526, 2292, 2465, 2555
ZrmI AGTACT 2 cut(s) 472, 568
Zsp2I ATGCAT 2 cut(s) 1866, 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.