Rroxscaffold_152G00434820

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000152
Physical Location & Seq
Reverse (-)
349419 .. 353842
4424 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_152G00434820.1

Sequence Viewer

Length: 2745 bp
ATGGCTCTGGCTAAAGAGATCATGGGTTGTTCTATGATGGAGTTCAAGTCTTCTTTGTCATCTCCATTTTTGAACCAAAACAAGTTTTTGATCAGACCCAATTTGGTGAATCCTTCTAGGATGAGGAGGGATAATCTGGTGCATTTGAGGAAGGCTAAGAAGGGGGCTGTGGCTGCTATTAGTGAAGATTTGGTCAAAATTGTGCCTGTTTTCTCTGCAGCAGAGAAGCCTGTGAAGTTCAAGGTGAGAGCTGTGGTGACAGTTAGGAACAAGATCAAAGAGGATTTCAAAGAGGCCATTGCCAAACAGTTAGATGCTTTAACTGACAAAATTGGCAGAAATGTTGCTTTGGAGCTTGTCAGCACTGTGATTGACCCAAGAACAAAAGCAGCCAAGAAAAGCAGTGAAGGCGTTTTGAAGGATTGGTCAAAGAAATCAAATCTGAAAGCAGAGAGGGTCAATTACACAGCTGAGTTTGAGGTGGACTCCAATTTTGGAGTACCAGGAGCAATCACAGTTACTAATAAGCATCAAACAGAGTTCTTTTTGGAGACAATAACCATCGAAGGTTTCACCTGCGGTCCATTGCATTTCCCATGTAATTCTTGGATGCAAGCCAAGAAAGATCACCCAGAAAAGAGAATTGTCTTCTGCAACAAGCCATATTTACCAAACCAGACTCCAGAGGGGCTCAAGGAACTGAGACAGAAAGAGCTGAAGAATCTTAGGGGTGATGGAAATGGAGTCAGAAAATTATCTGATAGGATCTATGACTATGCTTTTTATAATGACCTGGGGAACCCTGATAAGGGAATTGACCTTACTAGACCTATTCTTGGTGGTGAAAAAATTCCATATCCTAGAAGATGCCGCACTGGCCGTCTTCCAACTGATACTGATATGCTAACCGAGAGCAGGGTTGAGAAGCCACTACCAATGTATGTACCCAGAGATGAACAGTTTGAGGAGTCAAAAATGGACACATTTTCTTTTGGGAGGCTGAAGGGAGTGCTACACAATTTGATCCCTTCCTTAATGTCAAGCTTCAAATCTGACAAAGACTTCCGTGGCTTTGCCGACATTGACAGCCTCTACAGCGAAGGCATCCTTCTCAAACTGGGTTTACAAGAAGAAATCCTAAAGAAACTCCCATTGCCAAAAATGGTCAGCAAATTCCAAGACTACAACCAAGGAATTCTCAAATACGACATCCCTCAAATTCTTAGCAAGGACAAGTTCAGTTGGCTGCGAGATGACGAATTTGCCCGCCAAGCAGTGGCAGGGGTTAACCCATTGAGTATTGAGAGACTTGAATCTTTCCCACCAGTGAGCAAACTTGATCCTGAGGTTTATGGTCCAGTAGAATCTGCACTCAAAGAAGAACACATTTTACCTCATCTCTATGGCATGACTGTTCAACAGGCGCTGGATGAGAACAAGCTGTACATAGTGGACTACCATGACGTTTACCTTCCATTTCTTGATCGCATTAATGCCTTAGATGGGCGCAAGTCCTATGCGACTCGCACCATTTTTTTCTCGACACCCAATGGATCTCTCAAGCCAGTTGCCATCGAGCTTAGCCTCCCACATGCTGGACCAAGTTCAAGGGCTAAGCGTGTTTTGACTCCTCCGGTTGATGCCACAACCACTTGGTTGTGGCGACTCGCCAAGGCTCACGTCTGTTCCAACGACGCCGGTGTCCACCAACTTGTGCATCATTGGTTACGTACCCATGCTACCCTGGAGCCATTCATATTGGCAGCACACAGACAGTTGAGTGCAATGCACCCAATTTACAAGCTTTTGGATCCTCATATGAGATATACCCTTGAAATCAATGCATTGGCCCGACAAAGCTTAATCAACGCGGATGGAGTCATTGAGTCGTGCTTCACTCCCGGCCGCTACGCCATGGAAATCAGTGCTGCTGCCTATAAAGATTGGCGCTTTGACACCCAAAGCCTTCCAGAGGATCTCATCCGCCGGGGAATGGCAGTGCCTGACCCAACACAACCCCATGGTGTGAAACTTGTGCTTGAAGATTACCCATATGGCAGTGATGGACTACTACTATGGGGAGCAATTGAAAACTTTGTCCGAACCTATGTTCAACATTATTACCCAGATTCGAGCCTAATCCGAAGTGACAGGGAGTTACAAGATTGGTACTCAGAGTCCATCAATGTAGGCCATGCTGATCTTTGCAATGAAACATGGTGGCCTTCACTCTCAACACCAGATGACCTTGTTTCAATCCTCAGCACCCTAATTTGGCTAGCCTCAGCTCAACATGCTGCACTTAATTTTGCACAATACCCCTATGGTGGGTATGTCCCGAATCGCCCACCATTGATGAGAAGATTAATCCCTGAAGAGTCTGACCCGGAATATGCTAACTTCTTAGCAGACCCACAAAAGTACTTTCTATCAGCATTGCCCAGTGTTCTTCAGGCCACCAAATACATGGCTGTTGTGGACACATTGTCAACACATTCACCAGATGAAGAGTACCTTGGGGAGAGGCAACAGCCCTCGACTTGGTCCGGCGATGCTGATGTGGTTGAGGCGTTCTACAAGTTCTCGGCTGAGATTAGAGACATAGAGAAAGAGATTGATAGAAGGAATAACGATCCAACCCTTAAGCATAGGTGTGGAGCTGGAGTTTTGCCTTATGAGTTACTAGCACCGAGTTCGGAACCTGGGATTACATGTCGTGGTGTGCCTAATAGTGTGTCAATTTGA

Protein Analysis

914

Amino Acids

103.46

Weight (kDa)

6.78

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 134 - 217 9.3e-13 PLAT/LH2 domain
Lipoxygenase PF00305 230 - 897 0.0 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 786
AarI CACCTGC 1 cut(s) 584
AasI GACNNNNNNGTC 1 cut(s) 1700
Acc36I ACCTGC 1 cut(s) 584
AccB7I CCANNNNNTGG 2 cut(s) 1276, 1595
AccII CGCG 1 cut(s) 1871
AciI CCGC 6 cut(s) 579, 871, 1267, 1871, 1906, 1984
AclWI GGATC 8 cut(s) 773, 1018, 1334, 1561, 1805, 1818, 1983, 2627
AcoI YGGCCR 2 cut(s) 877, 1903
AcsI RAATTY 5 cut(s) 849, 1172, 1194, 1218, 1259
AcuI CTGAAG 4 cut(s) 737, 1022, 2394, 2435
AcyI GRCGYC 1 cut(s) 1695
AfaI GTAC 7 cut(s) 501, 945, 1445, 1732, 2171, 2423, 2513
AflII CTTAAG 1 cut(s) 2642
AflIII ACRYGT 1 cut(s) 2711
AhdI GACNNNNNGTC 1 cut(s) 2485
AjiI CACGTC 1 cut(s) 1681
AjnI CCWGG 4 cut(s) 502, 792, 1743, 2701
AjuI GAANNNNNNNTTGG 2 cut(s) 2499, 2531
Alw26I GTCTC 4 cut(s) 545, 697, 1300, 2592
AlwI GGATC 8 cut(s) 773, 1018, 1334, 1561, 1805, 1818, 1983, 2627
AlwNI CAGNNNCTG 2 cut(s) 1426, 2003
AoxI GGCC 7 cut(s) 294, 877, 1848, 1903, 2191, 2222, 2454
ApeKI GCWGC 8 cut(s) 173, 218, 389, 1246, 1763, 1928, 1931, 2297
ApoI RAATTY 5 cut(s) 849, 1172, 1194, 1218, 1259
ArsI GACNNNNNNTTYG 2 cut(s) 476, 508
AseI ATTAAT 2 cut(s) 1491, 2366
Asp700I GAANNNNTTC 1 cut(s) 849
AspLEI GCGC 3 cut(s) 1426, 1509, 1950
AspS9I GGNCC 5 cut(s) 581, 1355, 1598, 1849, 2544
AsuC2I CCSGG 3 cut(s) 1902, 1988, 2387
AsuHPI GGTGA 8 cut(s) 118, 256, 268, 565, 620, 743, 854, 2490
AsuNHI GCTAGC 1 cut(s) 2278
AvaII GGWCC 4 cut(s) 581, 1355, 1598, 2544
AxyI CCTNAGG 1 cut(s) 1344
BamHI GGATCC 1 cut(s) 1810
BanII GRGCYC 1 cut(s) 693
BbsI GAAGAC 3 cut(s) 42, 640, 875
BbvCI CCTCAGC 2 cut(s) 2261, 2284
BbvI GCAGC 8 cut(s) 160, 230, 401, 1233, 1775, 1915, 1918, 2284
BccI CCATC 8 cut(s) 31, 569, 728, 1496, 1580, 1868, 2057, 2189
BceAI ACGGC 1 cut(s) 864
BcgI CGANNNNNNTGC 2 cut(s) 2676, 2710
BciT130I CCWGG 4 cut(s) 504, 794, 1745, 2703
BclI TGATCA 1 cut(s) 90
BcnI CCSGG 3 cut(s) 1902, 1988, 2387
BcoDI GTCTC 4 cut(s) 545, 697, 1300, 2592
BfaI CTAG 5 cut(s) 117, 825, 861, 2279, 2684
BfmI CTRYAG 2 cut(s) 216, 1093
BfoI RGCGCY 2 cut(s) 1427, 1951
BfrI CTTAAG 1 cut(s) 2642
BfuAI ACCTGC 1 cut(s) 584
BglI GCCNNNNNGGC 1 cut(s) 876
BlpI GCTNAGC 2 cut(s) 1580, 1614
BmcAI AGTACT 1 cut(s) 2423
Bme1390I CCNGG 7 cut(s) 504, 794, 1745, 1902, 1988, 2387, 2703
Bme18I GGWCC 4 cut(s) 581, 1355, 1598, 2544
BmeRI GACNNNNNGTC 1 cut(s) 2485
BmgBI CACGTC 1 cut(s) 1681
BmgT120I GGNCC 5 cut(s) 581, 1355, 1598, 1849, 2544
BmiI GGNNCC 4 cut(s) 800, 1749, 1812, 2700
BmrFI CCNGG 7 cut(s) 504, 794, 1745, 1902, 1988, 2387, 2703
BmrI ACTGGG 2 cut(s) 1127, 2436
BmsI GCATC 8 cut(s) 304, 538, 600, 857, 1113, 1630, 1726, 2542
BmtI GCTAGC 1 cut(s) 2282
BmuI ACTGGG 2 cut(s) 1127, 2436
BpiI GAAGAC 3 cut(s) 42, 640, 875
BplI GAGNNNNNCTC 2 cut(s) 470, 502
BpmI CTGGAG 3 cut(s) 666, 1766, 2682
Bpu10I CCTNAGC 2 cut(s) 2261, 2284
Bpu1102I GCTNAGC 2 cut(s) 1580, 1614
BpuEI CTTGAG 2 cut(s) 677, 1544
BpuMI CCSGG 3 cut(s) 1902, 1988, 2387
BsaAI YACGTR 1 cut(s) 1730
BsaHI GRCGYC 1 cut(s) 1695
BsaWI WCCGGW 1 cut(s) 1633
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 2649, 2679
Bse118I RCCGGY 1 cut(s) 1697
Bse1I ACTGG 6 cut(s) 880, 1122, 1325, 1358, 1565, 2442
Bse21I CCTNAGG 1 cut(s) 1344
Bse3DI GCAATG 6 cut(s) 297, 584, 1151, 1791, 2215, 2435
BseBI CCWGG 4 cut(s) 504, 794, 1745, 2703
BseGI GGATG 7 cut(s) 126, 615, 1104, 1209, 1435, 1879, 1980
BseMI GCAATG 6 cut(s) 297, 584, 1151, 1791, 2215, 2435
BseMII CTCAG 7 cut(s) 462, 692, 1335, 2187, 2275, 2298, 2580
BseNI ACTGG 6 cut(s) 880, 1122, 1325, 1358, 1565, 2442
BseRI GAGGAG 3 cut(s) 139, 980, 1620
BseX3I CGGCCG 1 cut(s) 1903
BseXI GCAGC 8 cut(s) 160, 230, 401, 1233, 1775, 1915, 1918, 2284
BsgI GTGCAG 2 cut(s) 1353, 2283
Bsh1236I CGCG 1 cut(s) 1871
Bsh1285I CGRYCG 1 cut(s) 1906
BshFI GGCC 7 cut(s) 296, 879, 1850, 1905, 2193, 2224, 2456
BsiEI CGRYCG 1 cut(s) 1906
BsiSI CCGG 6 cut(s) 1634, 1698, 1902, 1987, 2387, 2547
BslFI GGGAC 1 cut(s) 2321
BsmAI GTCTC 4 cut(s) 545, 697, 1300, 2592
BsmFI GGGAC 1 cut(s) 2321
BsnI GGCC 7 cut(s) 296, 879, 1850, 1905, 2193, 2224, 2456
Bsp1286I GDGCHC 1 cut(s) 693
Bsp1407I TGTACA 1 cut(s) 1443
Bsp1720I GCTNAGC 2 cut(s) 1580, 1614
Bsp19I CCATGG 2 cut(s) 1914, 2020
BspACI CCGC 6 cut(s) 579, 871, 1267, 1871, 1906, 1984
BspANI GGCC 7 cut(s) 296, 879, 1850, 1905, 2193, 2224, 2456
BspCNI CTCAG 7 cut(s) 463, 693, 1336, 2186, 2274, 2297, 2581
BspFNI CGCG 1 cut(s) 1871
BspLI GGNNCC 4 cut(s) 800, 1749, 1812, 2700
BspMAI CTGCAG 1 cut(s) 220
BspMI ACCTGC 1 cut(s) 584
BspOI GCTAGC 1 cut(s) 2282
BspPI GGATC 8 cut(s) 773, 1018, 1334, 1561, 1805, 1818, 1983, 2627
BspTI CTTAAG 1 cut(s) 2642
BsrDI GCAATG 6 cut(s) 297, 584, 1151, 1791, 2215, 2435
BsrFI RCCGGY 1 cut(s) 1697
BsrGI TGTACA 1 cut(s) 1443
BsrI ACTGG 6 cut(s) 880, 1122, 1325, 1358, 1565, 2442
BssAI RCCGGY 1 cut(s) 1697
BssNI GRCGYC 1 cut(s) 1695
BssT1I CCWWGG 5 cut(s) 1189, 1671, 1914, 2020, 2515
Bst2UI CCWGG 4 cut(s) 504, 794, 1745, 2703
Bst4CI ACNGT 7 cut(s) 262, 309, 367, 517, 960, 1414, 1776
Bst6I CTCTTC 2 cut(s) 2370, 2502
BstACI GRCGYC 1 cut(s) 1695
BstAFI CTTAAG 1 cut(s) 2642
BstAUI TGTACA 1 cut(s) 1443
BstBAI YACGTR 1 cut(s) 1730
BstC8I GCNNGC 3 cut(s) 615, 1267, 2280
BstDSI CCRYGG 3 cut(s) 1066, 1914, 2020
BstENI CCTNNNNNAGG 1 cut(s) 1970
BstF5I GGATG 7 cut(s) 126, 615, 1104, 1209, 1435, 1879, 1980
BstFNI CGCG 1 cut(s) 1871
BstH2I RGCGCY 2 cut(s) 1427, 1951
BstHHI GCGC 3 cut(s) 1426, 1509, 1950
BstMAI GTCTC 4 cut(s) 545, 697, 1300, 2592
BstMCI CGRYCG 1 cut(s) 1906
BstMWI GCNNNNNNNGC 6 cut(s) 173, 408, 876, 1095, 1271, 2294
BstNI CCWGG 4 cut(s) 504, 794, 1745, 2703
BstNSI RCATGY 3 cut(s) 1595, 2297, 2715
BstSCI CCNGG 7 cut(s) 502, 792, 1743, 1900, 1986, 2385, 2701
BstSFI CTRYAG 2 cut(s) 216, 1093
BstSNI TACGTA 1 cut(s) 1730
BstUI CGCG 1 cut(s) 1871
BstV1I GCAGC 8 cut(s) 160, 230, 401, 1233, 1775, 1915, 1918, 2284
BstV2I GAAGAC 3 cut(s) 42, 640, 875
BstX2I RGATCY 4 cut(s) 765, 1553, 1810, 1975
BstXI CCANNNNNNTGG 1 cut(s) 2467
BstYI RGATCY 4 cut(s) 765, 1553, 1810, 1975
BstZI CGGCCG 1 cut(s) 1903
Bsu36I CCTNAGG 1 cut(s) 1344
BsuRI GGCC 7 cut(s) 296, 879, 1850, 1905, 2193, 2224, 2456
BtgI CCRYGG 3 cut(s) 1066, 1914, 2020
BtgZI GCGATG 1 cut(s) 2565
BtrI CACGTC 1 cut(s) 1681
BtsCI GGATG 7 cut(s) 126, 615, 1104, 1209, 1435, 1879, 1980
BtsI GCAGTG 4 cut(s) 409, 1281, 2004, 2065
BtsIMutI CAGTG 9 cut(s) 363, 409, 873, 1281, 1332, 1930, 2004, 2065, 2449
BveI ACCTGC 1 cut(s) 584
Cac8I GCNNGC 3 cut(s) 615, 1267, 2280
CaiI CAGNNNCTG 2 cut(s) 1426, 2003
CfoI GCGC 3 cut(s) 1426, 1509, 1950
Cfr10I RCCGGY 1 cut(s) 1697
Cfr13I GGNCC 5 cut(s) 581, 1355, 1598, 1849, 2544
CseI GACGC 1 cut(s) 1703
Csp6I GTAC 7 cut(s) 500, 944, 1444, 1731, 2170, 2422, 2512
CviQI GTAC 7 cut(s) 500, 944, 1444, 1731, 2170, 2422, 2512
DrdI GACNNNNNNGTC 1 cut(s) 1700
DriI GACNNNNNGTC 1 cut(s) 2485
DseDI GACNNNNNNGTC 1 cut(s) 1700
EaeI YGGCCR 2 cut(s) 877, 1903
EagI CGGCCG 1 cut(s) 1903
Eam1104I CTCTTC 2 cut(s) 2370, 2502
Eam1105I GACNNNNNGTC 1 cut(s) 2485
EarI CTCTTC 2 cut(s) 2370, 2502
EciI GGCGGA 1 cut(s) 1973
EclXI CGGCCG 1 cut(s) 1903
Eco105I TACGTA 1 cut(s) 1730
Eco130I CCWWGG 5 cut(s) 1189, 1671, 1914, 2020, 2515
Eco24I GRGCYC 1 cut(s) 693
Eco47I GGWCC 4 cut(s) 581, 1355, 1598, 2544
Eco52I CGGCCG 1 cut(s) 1903
Eco57I CTGAAG 4 cut(s) 737, 1022, 2394, 2435
Eco81I CCTNAGG 1 cut(s) 1344
EcoNI CCTNNNNNAGG 1 cut(s) 1970
EcoRI GAATTC 1 cut(s) 1194
EcoRII CCWGG 4 cut(s) 502, 792, 1743, 2701
EcoT14I CCWWGG 5 cut(s) 1189, 1671, 1914, 2020, 2515
EcoT22I ATGCAT 1 cut(s) 1846
EcoT38I GRGCYC 1 cut(s) 693
ErhI CCWWGG 5 cut(s) 1189, 1671, 1914, 2020, 2515
FalI AAGNNNNNCTT 4 cut(s) 1092, 1124, 2499, 2531
FaqI GGGAC 1 cut(s) 2321
FauI CCCGC 1 cut(s) 1274
FauNDI CATATG 2 cut(s) 1818, 2053
FbaI TGATCA 1 cut(s) 90
FokI GGATG 7 cut(s) 133, 622, 1091, 1196, 1442, 1886, 1967
FriOI GRGCYC 1 cut(s) 693
FspBI CTAG 5 cut(s) 117, 825, 861, 2279, 2684
GlaI GCGC 3 cut(s) 1425, 1508, 1949
GsuI CTGGAG 3 cut(s) 666, 1766, 2682
HaeII RGCGCY 2 cut(s) 1427, 1951
HaeIII GGCC 7 cut(s) 296, 879, 1850, 1905, 2193, 2224, 2456
HapII CCGG 6 cut(s) 1634, 1698, 1902, 1987, 2387, 2547
HgaI GACGC 1 cut(s) 1703
HhaI GCGC 3 cut(s) 1426, 1509, 1950
Hin1I GRCGYC 1 cut(s) 1695
Hin6I GCGC 3 cut(s) 1424, 1507, 1948
HinP1I GCGC 3 cut(s) 1424, 1507, 1948
HincII GTYRAC 2 cut(s) 1288, 2490
HindII GTYRAC 2 cut(s) 1288, 2490
HindIII AAGCTT 3 cut(s) 1042, 1802, 1858
HpaI GTTAAC 1 cut(s) 1288
HpaII CCGG 6 cut(s) 1634, 1698, 1902, 1987, 2387, 2547
HphI GGTGA 8 cut(s) 118, 256, 268, 565, 620, 743, 854, 2490
Hpy166II GTNNAC 8 cut(s) 484, 1124, 1288, 1453, 1468, 1705, 2479, 2490
Hpy188III TCNNGA 6 cut(s) 683, 1343, 1481, 1540, 1970, 2338
Hpy8I GTNNAC 8 cut(s) 484, 1124, 1288, 1453, 1468, 1705, 2479, 2490
Hpy99I CGWCG 1 cut(s) 1697
HpyCH4III ACNGT 7 cut(s) 262, 309, 367, 517, 960, 1414, 1776
HpyCH4IV ACGT 3 cut(s) 1464, 1680, 1729
HpyF10VI GCNNNNNNNGC 6 cut(s) 173, 408, 876, 1095, 1271, 2294
HpySE526I ACGT 3 cut(s) 1464, 1680, 1729
Hsp92I GRCGYC 1 cut(s) 1695
HspAI GCGC 3 cut(s) 1424, 1507, 1948
Ksp22I TGATCA 1 cut(s) 90
KspAI GTTAAC 1 cut(s) 1288
LmnI GCTCC 5 cut(s) 352, 506, 1747, 2081, 2657
Lsp1109I GCAGC 8 cut(s) 160, 230, 401, 1233, 1775, 1915, 1918, 2284
LweI GCATC 8 cut(s) 304, 538, 600, 857, 1113, 1630, 1726, 2542
MaeI CTAG 5 cut(s) 117, 825, 861, 2279, 2684
MaeII ACGT 3 cut(s) 1464, 1680, 1729
MaeIII GTNAC 6 cut(s) 256, 517, 1725, 2147, 2157, 2679
MfeI CAATTG 1 cut(s) 2085
MflI RGATCY 4 cut(s) 765, 1553, 1810, 1975
MhlI GDGCHC 1 cut(s) 693
MmeI TCCRAC 3 cut(s) 911, 1713, 2660
Mph1103I ATGCAT 1 cut(s) 1846
MroXI GAANNNNTTC 1 cut(s) 849
MseI TTAA 8 cut(s) 320, 1034, 1287, 1491, 1862, 2304, 2366, 2643
MslI CAYNNNNRTG 2 cut(s) 1401, 2652
MspA1I CMGCKG 1 cut(s) 470
MspCI CTTAAG 1 cut(s) 2642
MspI CCGG 6 cut(s) 1634, 1698, 1902, 1987, 2387, 2547
MspR9I CCNGG 7 cut(s) 504, 794, 1745, 1902, 1988, 2387, 2703
MunI CAATTG 1 cut(s) 2085
MvaI CCWGG 4 cut(s) 504, 794, 1745, 2703
MvnI CGCG 1 cut(s) 1871
MwoI GCNNNNNNNGC 6 cut(s) 173, 408, 876, 1095, 1271, 2294
NciI CCSGG 3 cut(s) 1902, 1988, 2387
NcoI CCATGG 2 cut(s) 1914, 2020
NdeI CATATG 2 cut(s) 1818, 2053
NheI GCTAGC 1 cut(s) 2278
NlaIV GGNNCC 4 cut(s) 800, 1749, 1812, 2700
NmeAIII GCCGAG 1 cut(s) 2564
NmuCI GTSAC 2 cut(s) 256, 2147
NsiI ATGCAT 1 cut(s) 1846
NspI RCATGY 3 cut(s) 1595, 2297, 2715
PaqCI CACCTGC 1 cut(s) 584
PciI ACATGT 1 cut(s) 2711
PdmI GAANNNNTTC 1 cut(s) 849
PfeI GAWTC 6 cut(s) 109, 721, 1313, 1364, 2129, 2341
PflFI GACNNNGTC 1 cut(s) 2542
PflMI CCANNNNNTGG 2 cut(s) 1276, 1595
Ppu21I YACGTR 1 cut(s) 1730
PscI ACATGT 1 cut(s) 2711
PshBI ATTAAT 2 cut(s) 1491, 2366
PsiI TTATAA 1 cut(s) 786
Psp6I CCWGG 4 cut(s) 502, 792, 1743, 2701
PspGI CCWGG 4 cut(s) 502, 792, 1743, 2701
PspN4I GGNNCC 4 cut(s) 800, 1749, 1812, 2700
PspPI GGNCC 5 cut(s) 581, 1355, 1598, 1849, 2544
PsrI GAACNNNNNNTAC 4 cut(s) 1374, 1406, 1427, 1459
PstI CTGCAG 1 cut(s) 220
PstNI CAGNNNCTG 2 cut(s) 1426, 2003
PsuI RGATCY 4 cut(s) 765, 1553, 1810, 1975
PsyI GACNNNGTC 1 cut(s) 2542
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 7 cut(s) 501, 945, 1445, 1732, 2171, 2423, 2513
RsaNI GTAC 7 cut(s) 500, 944, 1444, 1731, 2170, 2422, 2512
RseI CAYNNNNRTG 2 cut(s) 1401, 2652
SaqAI TTAA 8 cut(s) 320, 1034, 1287, 1491, 1862, 2304, 2366, 2643
Sau96I GGNCC 5 cut(s) 581, 1355, 1598, 1849, 2544
ScaI AGTACT 1 cut(s) 2423
ScrFI CCNGG 7 cut(s) 504, 794, 1745, 1902, 1988, 2387, 2703
SduI GDGCHC 1 cut(s) 693
SfaNI GCATC 8 cut(s) 304, 538, 600, 857, 1113, 1630, 1726, 2542
SfcI CTRYAG 2 cut(s) 216, 1093
SgrAI CRCCGGYG 1 cut(s) 1697
SinI GGWCC 4 cut(s) 581, 1355, 1598, 2544
SmiMI CAYNNNNRTG 2 cut(s) 1401, 2652
SmlI CTYRAG 3 cut(s) 692, 1559, 2642
SmoI CTYRAG 3 cut(s) 692, 1559, 2642
SnaBI TACGTA 1 cut(s) 1730
SsiI CCGC 6 cut(s) 579, 871, 1267, 1871, 1906, 1984
SspMI CTAG 5 cut(s) 117, 825, 861, 2279, 2684
StyD4I CCNGG 7 cut(s) 502, 792, 1743, 1900, 1986, 2385, 2701
StyI CCWWGG 5 cut(s) 1189, 1671, 1914, 2020, 2515
TaaI ACNGT 7 cut(s) 262, 309, 367, 517, 960, 1414, 1776
TaiI ACGT 3 cut(s) 1467, 1683, 1732
TaqI TCGA 5 cut(s) 564, 1541, 1575, 2132, 2537
TatI WGTACW 2 cut(s) 1443, 2421
TauI GCSGC 2 cut(s) 873, 1908
TfiI GAWTC 6 cut(s) 109, 721, 1313, 1364, 2129, 2341
Tru1I TTAA 8 cut(s) 320, 1034, 1287, 1491, 1862, 2304, 2366, 2643
Tru9I TTAA 8 cut(s) 320, 1034, 1287, 1491, 1862, 2304, 2366, 2643
TscAI CASTG 9 cut(s) 370, 409, 880, 1281, 1332, 1930, 2004, 2065, 2449
TseFI GTSAC 2 cut(s) 256, 2147
TseI GCWGC 8 cut(s) 173, 218, 389, 1246, 1763, 1928, 1931, 2297
Tsp45I GTSAC 2 cut(s) 256, 2147
TspDTI ATGAA 4 cut(s) 969, 1744, 2226, 2520
TspGWI ACGGA 1 cut(s) 1055
TspRI CASTG 9 cut(s) 370, 409, 880, 1281, 1332, 1930, 2004, 2065, 2449
Tth111I GACNNNGTC 1 cut(s) 2542
Van91I CCANNNNNTGG 2 cut(s) 1276, 1595
Vha464I CTTAAG 1 cut(s) 2642
VpaK11BI GGWCC 4 cut(s) 581, 1355, 1598, 2544
VspI ATTAAT 2 cut(s) 1491, 2366
XagI CCTNNNNNAGG 1 cut(s) 1970
XapI RAATTY 5 cut(s) 849, 1172, 1194, 1218, 1259
XceI RCATGY 3 cut(s) 1595, 2297, 2715
XcmI CCANNNNNNNNNTGG 2 cut(s) 603, 2464
XmnI GAANNNNTTC 1 cut(s) 849
XspI CTAG 5 cut(s) 117, 825, 861, 2279, 2684
ZrmI AGTACT 1 cut(s) 2423
Zsp2I ATGCAT 1 cut(s) 1846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.