Rmu_sc0002145.1_g000002

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002145.1
OG0000650
Physical Location & Seq
Reverse (-)
8847 .. 14838
5992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002145.1_g000002.1.cds

Sequence Viewer

Length: 2649 bp
atgggcgtaactctggtagcacatgatttcaatcccctcagttcaaaaccaagagccttaagcatccaaaaacttccttctcctgccaatttgttttcttcgacgaccaagacaaggagagtcgagttacaatggaagaagaagaagatggcaaacgtagcggtagtgaatcttaatacaacaaccaatggtgctcttgatcatgtggatgtaaatatcaatgtcgactctcttgctcttaccgcagagaagcctgcagtgactttcgaactcattgccataatcactgtaaagaatattcatcagaaggtaaatatcaatgtcgacacaatgcttcattggttcggcgacagaagacaagatgattacaagggtggggtacttctacagcttgttagtactcaaactgccccgaaagacacgatgattacaagggtggggtacttctacagcttgttagtactcaaactgccccaagaagctgtattggattggacaaagaatccgaaaatgggtgatgagaagaacagttaccaagtcaagtttgtggtggactcaacatttgggatgccaggagccattacagtgagtaacagatatgatgatgagttctatttagatagcattaacattgaaggtctagttcactttgcctgcaactcttgggtccaaccagatcagaagtctaacgcaccaaaaagaatcttcttctctactagggcatacttacccaacgagacaccagctgggctgaaagagctaagagaaatagagctgattcaactgaggggcgatgggactgggcttagggtgcaatctgatagaatatacgactacgacagttacaatgacattggaaatccagataagggaattgagtacatgagacctacccttggaggcaatgttcacccacaccctagacgctgtcgaactggacggcctccaaccaagacagatgagaatatggagtcaccagtgagcgaattcgagacaatctatgtgcctagagatgaagagtttgagcagcccaaacaagaagctctaaatgtcggaaaattgaaaggaactgtccgcaatataactcatgcactttcaacaattactgcagatagaaatgtcaaggggtattcggacatcaatggggagatatattgtctgccagatgaccaatttgggcgccaaaccattgcaggcataaaccctttaagcatagaaaggctcgaggttttcccacctgtaagcaaactagatacctccatttatggtcctcaagaatcagcactcaaggaagagcatataataggccaactaaatggcatgtccatacaacaggcattggaagaaaacaagcttttcatactagactaccatgacatttttcttccatttctcaacaaaataaacgctctagatgaccggaaagcttatgcaacacgaacaatttttttcctgacatcattaggaactttgaagcccattgctattgagctcagtctttcagattcagcatccaagcaggttctcactcctccaattgatgctacgacaagttggctttggcagcttggcaaggctcatgtatgctccaatgatgccagtgttcatcaacttgttcatcactggttacgcacccacgccggcatagaaccgattacaatagcaactcatagacaactgagtgttatgcatcctatctacaagcttctcaaacctcacttgcgctacaccttgaagataaatgctatggcccgtcaggatctcatcaacgccggagggatagtcgagtccaattttactgctgccaaatactgcatggagttcagttgtgctgcttatcgagattggtggcgctttgaccttgaaggtcttcctgcagatctcattagaagaggaatagctgtaccagacacaagtcaagtgcatgggctaaaactactcattcaagactacccttatgcaacagacgggctcctcatatggtcagcaattgagacattggttcaaacctatgttaattactactaccctaatgcaagtttggtcacttcagatactgaactccaatcctggtacaatgaatatatcaatttgggacatgctgatcttcacaacgctagctggtggccaaaactctctactccggtggatctcatctccattctcaccaccatcatttggctcacatcagctcaacacgctgccctaaacttcgggcaatacccttatggtggctatgtcccaacccgcccaccacacatgaggagactaattccaaaaaacaatgacgcggagtatgcttctttcattagggatcctcagcagtacttcatatcctcattgccgagtttatttgaagcgacgaagtacatggctgtaattgatataatctcggcacattcaccggatgaagagtacattggggagagaaaagacttgtcaaactggtcagctgacactgagattagtgaggcattttacagattttcagtggagatgaggaggattgagaaagagattgcacaaagaaacggggatttaagtctccggaatagatgtggggctggggttccaccatacgagcttctcatgccgagttcagaacctggggttacttgcagaggtgttccaaatagtataacagtttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

882

Amino Acids

99.61

Weight (kDa)

6.09

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1510
AccB1I GGYRCC 1 cut(s) 1179
AccB7I CCANNNNNTGG 1 cut(s) 2178
AccI GTMKAC 2 cut(s) 225, 324
AccII CGCG 1 cut(s) 2291
AccIII TCCGGA 1 cut(s) 2547
AciI CCGC 5 cut(s) 161, 243, 1075, 2248, 2291
AclWI GGATC 4 cut(s) 1767, 2157, 2309, 2322
AcoI YGGCCR 1 cut(s) 2126
AcsI RAATTY 1 cut(s) 986
AcuI CTGAAG 1 cut(s) 2034
AcyI GRCGYC 1 cut(s) 1180
AfiI CCNNNNNNNGG 6 cut(s) 114, 512, 869, 896, 2178, 2231
AflII CTTAAG 1 cut(s) 58
AjnI CCWGG 3 cut(s) 571, 2069, 2605
AjuI GAANNNNNNNTTGG 2 cut(s) 2403, 2435
AloI GAACNNNNNNTCC 2 cut(s) 891, 923
Alw21I GWGCWC 2 cut(s) 196, 1494
Alw26I GTCTC 6 cut(s) 731, 880, 986, 1988, 2260, 2549
AlwI GGATC 4 cut(s) 1767, 2157, 2309, 2322
AlwNI CAGNNNCTG 2 cut(s) 2057, 2606
Ama87I CYCGRG 1 cut(s) 1223
Aor13HI TCCGGA 1 cut(s) 2547
AoxI GGCC 4 cut(s) 941, 1306, 1749, 2126
ApeKI GCWGC 5 cut(s) 1027, 1564, 1802, 1832, 2201
ApoI RAATTY 1 cut(s) 986
ArsI GACNNNNNNTTYG 2 cut(s) 545, 577
Asp700I GAANNNNTTC 1 cut(s) 1869
AspLEI GCGC 3 cut(s) 1182, 1725, 1854
AspS9I GGNCC 3 cut(s) 667, 1268, 1750
AsuHPI GGTGA 5 cut(s) 527, 902, 966, 2158, 2394
AsuII TTCGAA 1 cut(s) 267
AsuNHI GCTAGC 1 cut(s) 2117
AvaI CYCGRG 1 cut(s) 1223
AvaII GGWCC 2 cut(s) 667, 1268
BalI TGGCCA 1 cut(s) 2128
BamHI GGATCC 1 cut(s) 2314
BanI GGYRCC 1 cut(s) 1179
BanII GRGCYC 2 cut(s) 1494, 1974
BarI GAAGNNNNNNTAC 2 cut(s) 515, 547
BbsI GAAGAC 2 cut(s) 361, 1862
Bbv12I GWGCWC 2 cut(s) 196, 1494
BbvCI CCTCAGC 1 cut(s) 2319
BbvI GCAGC 5 cut(s) 1039, 1576, 1789, 1819, 2188
BccI CCATC 3 cut(s) 142, 788, 2180
BceAI ACGGC 1 cut(s) 956
BcgI CGANNNNNNTGC 4 cut(s) 215, 249, 257, 291
BciT130I CCWGG 3 cut(s) 573, 2071, 2607
BclI TGATCA 1 cut(s) 199
BcoDI GTCTC 6 cut(s) 731, 880, 986, 1988, 2260, 2549
BfaI CTAG 8 cut(s) 641, 717, 921, 1008, 1250, 1364, 1412, 2118
BfmI CTRYAG 5 cut(s) 255, 386, 448, 1107, 1875
BfoI RGCGCY 2 cut(s) 1183, 1855
BfrI CTTAAG 1 cut(s) 58
BfuAI ACCTGC 1 cut(s) 1510
BglII AGATCT 1 cut(s) 1879
BisI GCNGC 5 cut(s) 1028, 1565, 1803, 1833, 2202
BlsI GCNGC 5 cut(s) 1029, 1566, 1804, 1834, 2203
BmcAI AGTACT 3 cut(s) 400, 462, 2327
Bme1390I CCNGG 3 cut(s) 573, 2071, 2607
Bme18I GGWCC 2 cut(s) 667, 1268
BmeT110I CYCGRG 1 cut(s) 1223
BmgT120I GGNCC 3 cut(s) 667, 1268, 1750
BmiI GGNNCC 6 cut(s) 577, 668, 1181, 1973, 2316, 2571
BmrFI CCNGG 3 cut(s) 573, 2071, 2607
BmrI ACTGGG 1 cut(s) 810
BmsI GCATC 6 cut(s) 72, 558, 1520, 1531, 1585, 1699
BmtI GCTAGC 1 cut(s) 2121
BmuI ACTGGG 1 cut(s) 810
BoxI GACNNNNGTC 1 cut(s) 1914
BpiI GAAGAC 2 cut(s) 361, 1862
Bpu10I CCTNAGC 2 cut(s) 806, 2319
Bpu14I TTCGAA 1 cut(s) 267
BpuEI CTTGAG 2 cut(s) 1257, 1271
BsaBI GATNNNNATC 1 cut(s) 30
BsaHI GRCGYC 1 cut(s) 1180
BsaI GGTCTC 1 cut(s) 880
BsaJI CCNNGG 2 cut(s) 895, 2606
BsaWI WCCGGW 4 cut(s) 1419, 2143, 2404, 2547
BsaXI ACNNNNNCTCC 4 cut(s) 891, 921, 1767, 1797
Bsc4I CCNNNNNNNGG 6 cut(s) 114, 512, 869, 896, 2178, 2231
Bse118I RCCGGY 1 cut(s) 1640
Bse1I ACTGG 6 cut(s) 805, 940, 977, 1599, 1628, 2450
Bse3DI GCAATG 5 cut(s) 273, 910, 1188, 1479, 2339
Bse8I GATNNNNATC 1 cut(s) 30
BseAI TCCGGA 1 cut(s) 2547
BseBI CCWGG 3 cut(s) 573, 2071, 2607
BseDI CCNNGG 2 cut(s) 895, 2606
BseGI GGATG 6 cut(s) 63, 214, 573, 1511, 1690, 2413
BseJI GATNNNNATC 1 cut(s) 30
BseLI CCNNNNNNNGG 6 cut(s) 114, 512, 869, 896, 2178, 2231
BseMI GCAATG 5 cut(s) 273, 910, 1188, 1479, 2339
BseMII CTCAG 6 cut(s) 52, 776, 1507, 1670, 2333, 2451
BseNI ACTGG 6 cut(s) 805, 940, 977, 1599, 1628, 2450
BseRI GAGGAG 4 cut(s) 1521, 1964, 2278, 2515
BseXI GCAGC 5 cut(s) 1039, 1576, 1789, 1819, 2188
BseYI CCCAGC 2 cut(s) 746, 2564
Bsh1236I CGCG 1 cut(s) 2291
BshFI GGCC 4 cut(s) 943, 1308, 1751, 2128
BshNI GGYRCC 1 cut(s) 1179
BsiHKAI GWGCWC 2 cut(s) 196, 1494
BsiHKCI CYCGRG 1 cut(s) 1223
BsiSI CCGG 6 cut(s) 1420, 1641, 1773, 2144, 2405, 2548
BslFI GGGAC 3 cut(s) 811, 2109, 2225
BslI CCNNNNNNNGG 6 cut(s) 114, 512, 869, 896, 2178, 2231
BsmAI GTCTC 6 cut(s) 731, 880, 986, 1988, 2260, 2549
BsmFI GGGAC 3 cut(s) 811, 2109, 2225
BsnI GGCC 4 cut(s) 943, 1308, 1751, 2128
Bso31I GGTCTC 1 cut(s) 880
BsoBI CYCGRG 1 cut(s) 1223
Bsp119I TTCGAA 1 cut(s) 267
Bsp1286I GDGCHC 3 cut(s) 196, 1494, 1974
Bsp13I TCCGGA 1 cut(s) 2547
Bsp143I GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
BspACI CCGC 5 cut(s) 161, 243, 1075, 2248, 2291
BspANI GGCC 4 cut(s) 943, 1308, 1751, 2128
BspCNI CTCAG 6 cut(s) 51, 777, 1506, 1671, 2332, 2452
BspEI TCCGGA 1 cut(s) 2547
BspFNI CGCG 1 cut(s) 2291
BspLI GGNNCC 6 cut(s) 577, 668, 1181, 1973, 2316, 2571
BspMAI CTGCAG 3 cut(s) 259, 1111, 1879
BspMI ACCTGC 1 cut(s) 1510
BspOI GCTAGC 1 cut(s) 2121
BspPI GGATC 4 cut(s) 1767, 2157, 2309, 2322
BspQI GCTCTTC 1 cut(s) 1287
BspT104I TTCGAA 1 cut(s) 267
BspT107I GGYRCC 1 cut(s) 1179
BspTI CTTAAG 1 cut(s) 58
BspTNI GGTCTC 1 cut(s) 880
BsrDI GCAATG 5 cut(s) 273, 910, 1188, 1479, 2339
BsrFI RCCGGY 1 cut(s) 1640
BsrI ACTGG 6 cut(s) 805, 940, 977, 1599, 1628, 2450
BssAI RCCGGY 1 cut(s) 1640
BssECI CCNNGG 2 cut(s) 895, 2606
BssMI GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
BssNI GRCGYC 1 cut(s) 1180
BssT1I CCWWGG 1 cut(s) 895
Bst2UI CCWGG 3 cut(s) 573, 2071, 2607
Bst4CI ACNGT 6 cut(s) 289, 530, 586, 842, 1072, 2644
Bst6I CTCTTC 4 cut(s) 1011, 1287, 1885, 2406
BstACI GRCGYC 1 cut(s) 1180
BstAFI CTTAAG 1 cut(s) 58
BstBI TTCGAA 1 cut(s) 267
BstC8I GCNNGC 5 cut(s) 255, 655, 1195, 1642, 2119
BstDEI CTNAG 8 cut(s) 38, 761, 785, 806, 1493, 1679, 2319, 2460
BstF5I GGATG 6 cut(s) 63, 214, 573, 1511, 1690, 2413
BstFNI CGCG 1 cut(s) 2291
BstH2I RGCGCY 2 cut(s) 1183, 1855
BstHHI GCGC 3 cut(s) 1182, 1725, 1854
BstKTI GATC 7 cut(s) 202, 679, 1762, 1882, 2107, 2152, 2317
BstMAI GTCTC 6 cut(s) 731, 880, 986, 1988, 2260, 2549
BstMBI GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
BstMWI GCNNNNNNNGC 8 cut(s) 158, 242, 757, 811, 1564, 2198, 2297, 2590
BstNI CCWGG 3 cut(s) 573, 2071, 2607
BstNSI RCATGY 2 cut(s) 1324, 2102
BstPAI GACNNNNGTC 1 cut(s) 1914
BstSCI CCNGG 3 cut(s) 571, 2069, 2605
BstSFI CTRYAG 5 cut(s) 255, 386, 448, 1107, 1875
BstUI CGCG 1 cut(s) 2291
BstV1I GCAGC 5 cut(s) 1039, 1576, 1789, 1819, 2188
BstV2I GAAGAC 2 cut(s) 361, 1862
BstX2I RGATCY 4 cut(s) 1759, 1879, 2149, 2314
BstXI CCANNNNNNTGG 1 cut(s) 1316
BstYI RGATCY 4 cut(s) 1759, 1879, 2149, 2314
BsuRI GGCC 4 cut(s) 943, 1308, 1751, 2128
BtgZI GCGATG 1 cut(s) 807
BtsCI GGATG 6 cut(s) 63, 214, 573, 1511, 1690, 2413
BtsI GCAGTG 1 cut(s) 264
BtsIMutI CAGTG 8 cut(s) 264, 285, 591, 984, 1606, 1621, 2457, 2496
BveI ACCTGC 1 cut(s) 1510
Cac8I GCNNGC 5 cut(s) 255, 655, 1195, 1642, 2119
CaiI CAGNNNCTG 2 cut(s) 2057, 2606
CfoI GCGC 3 cut(s) 1182, 1725, 1854
Cfr10I RCCGGY 1 cut(s) 1640
Cfr13I GGNCC 3 cut(s) 667, 1268, 1750
CseI GACGC 2 cut(s) 933, 2297
DdeI CTNAG 8 cut(s) 38, 761, 785, 806, 1493, 1679, 2319, 2460
DinI GGCGCC 1 cut(s) 1181
DpnI GATC 7 cut(s) 201, 678, 1761, 1881, 2106, 2151, 2316
DpnII GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
EaeI YGGCCR 1 cut(s) 2126
Eam1104I CTCTTC 4 cut(s) 1011, 1287, 1885, 2406
EarI CTCTTC 4 cut(s) 1011, 1287, 1885, 2406
Ecl136II GAGCTC 1 cut(s) 1492
Eco130I CCWWGG 1 cut(s) 895
Eco24I GRGCYC 2 cut(s) 1494, 1974
Eco31I GGTCTC 1 cut(s) 880
Eco47I GGWCC 2 cut(s) 667, 1268
Eco53kI GAGCTC 1 cut(s) 1492
Eco57I CTGAAG 1 cut(s) 2034
Eco88I CYCGRG 1 cut(s) 1223
EcoICRI GAGCTC 1 cut(s) 1492
EcoRI GAATTC 1 cut(s) 986
EcoRII CCWGG 3 cut(s) 571, 2069, 2605
EcoT14I CCWWGG 1 cut(s) 895
EcoT22I ATGCAT 1 cut(s) 1692
EcoT38I GRGCYC 2 cut(s) 1494, 1974
EgeI GGCGCC 1 cut(s) 1181
EheI GGCGCC 1 cut(s) 1181
ErhI CCWWGG 1 cut(s) 895
FaqI GGGAC 3 cut(s) 811, 2109, 2225
FauI CCCGC 1 cut(s) 2255
FauNDI CATATG 1 cut(s) 1979
FbaI TGATCA 1 cut(s) 199
FblI GTMKAC 2 cut(s) 225, 324
Fnu4HI GCNGC 5 cut(s) 1028, 1565, 1803, 1833, 2202
FokI GGATG 6 cut(s) 50, 221, 580, 1498, 1677, 2420
FriOI GRGCYC 2 cut(s) 1494, 1974
Fsp4HI GCNGC 5 cut(s) 1028, 1565, 1803, 1833, 2202
FspBI CTAG 8 cut(s) 641, 717, 921, 1008, 1250, 1364, 1412, 2118
GlaI GCGC 3 cut(s) 1181, 1724, 1853
GluI GCNGC 5 cut(s) 1028, 1565, 1803, 1833, 2202
GsaI CCCAGC 2 cut(s) 750, 2568
HaeII RGCGCY 2 cut(s) 1183, 1855
HaeIII GGCC 4 cut(s) 943, 1308, 1751, 2128
HapII CCGG 6 cut(s) 1420, 1641, 1773, 2144, 2405, 2548
HgaI GACGC 2 cut(s) 933, 2297
HhaI GCGC 3 cut(s) 1182, 1725, 1854
Hin1I GRCGYC 1 cut(s) 1180
Hin6I GCGC 3 cut(s) 1180, 1723, 1852
HinP1I GCGC 3 cut(s) 1180, 1723, 1852
HincII GTYRAC 2 cut(s) 226, 325
HindII GTYRAC 2 cut(s) 226, 325
HindIII AAGCTT 3 cut(s) 1352, 1425, 1703
HpaII CCGG 6 cut(s) 1420, 1641, 1773, 2144, 2405, 2548
HphI GGTGA 5 cut(s) 527, 902, 966, 2158, 2394
Hpy166II GTNNAC 5 cut(s) 226, 325, 553, 646, 910
Hpy188I TCNGA 9 cut(s) 306, 507, 681, 820, 1055, 1135, 1504, 2053, 2602
Hpy8I GTNNAC 5 cut(s) 226, 325, 553, 646, 910
Hpy99I CGWCG 2 cut(s) 106, 2365
HpyAV CCTTC 4 cut(s) 87, 301, 629, 1859
HpyCH4III ACNGT 6 cut(s) 289, 530, 586, 842, 1072, 2644
HpyCH4IV ACGT 1 cut(s) 156
HpyF10VI GCNNNNNNNGC 8 cut(s) 158, 242, 757, 811, 1564, 2198, 2297, 2590
HpyF3I CTNAG 8 cut(s) 38, 761, 785, 806, 1493, 1679, 2319, 2460
HpySE526I ACGT 1 cut(s) 156
Hsp92I GRCGYC 1 cut(s) 1180
HspAI GCGC 3 cut(s) 1180, 1723, 1852
KasI GGCGCC 1 cut(s) 1179
Kpn2I TCCGGA 1 cut(s) 2547
KroI GCCGGC 1 cut(s) 1640
KroNI GCCGGC 1 cut(s) 1642
Ksp22I TGATCA 1 cut(s) 199
Kzo9I GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
LguI GCTCTTC 1 cut(s) 1287
LmnI GCTCC 3 cut(s) 575, 1592, 1977
Lsp1109I GCAGC 5 cut(s) 1039, 1576, 1789, 1819, 2188
LweI GCATC 6 cut(s) 72, 558, 1520, 1531, 1585, 1699
MaeI CTAG 8 cut(s) 641, 717, 921, 1008, 1250, 1364, 1412, 2118
MaeII ACGT 1 cut(s) 156
MalI GATC 7 cut(s) 201, 678, 1761, 1881, 2106, 2151, 2316
MboI GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
MfeI CAATTG 2 cut(s) 1536, 1989
MflI RGATCY 4 cut(s) 1759, 1879, 2149, 2314
MhlI GDGCHC 3 cut(s) 196, 1494, 1974
MlsI TGGCCA 1 cut(s) 2128
MluNI TGGCCA 1 cut(s) 2128
Mly113I GGCGCC 1 cut(s) 1180
MlyI GAGTC 5 cut(s) 129, 221, 548, 980, 1796
MmeI TCCRAC 3 cut(s) 694, 971, 1033
Mox20I TGGCCA 1 cut(s) 2128
Mph1103I ATGCAT 1 cut(s) 1692
MroI TCCGGA 1 cut(s) 2547
MroNI GCCGGC 1 cut(s) 1640
MroXI GAANNNNTTC 1 cut(s) 1869
MscI TGGCCA 1 cut(s) 2128
MseI TTAA 6 cut(s) 59, 174, 627, 1208, 2016, 2540
MslI CAYNNNNRTG 2 cut(s) 207, 584
Msp20I TGGCCA 1 cut(s) 2128
MspA1I CMGCKG 2 cut(s) 746, 2453
MspCI CTTAAG 1 cut(s) 58
MspI CCGG 6 cut(s) 1420, 1641, 1773, 2144, 2405, 2548
MspR9I CCNGG 3 cut(s) 573, 2071, 2607
MunI CAATTG 2 cut(s) 1536, 1989
MvaI CCWGG 3 cut(s) 573, 2071, 2607
MvnI CGCG 1 cut(s) 2291
MwoI GCNNNNNNNGC 8 cut(s) 158, 242, 757, 811, 1564, 2198, 2297, 2590
NaeI GCCGGC 1 cut(s) 1642
NarI GGCGCC 1 cut(s) 1180
NdeI CATATG 1 cut(s) 1979
NdeII GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
NgoMIV GCCGGC 1 cut(s) 1640
NheI GCTAGC 1 cut(s) 2117
NlaIV GGNNCC 6 cut(s) 577, 668, 1181, 1973, 2316, 2571
NmeAIII GCCGAG 3 cut(s) 2370, 2372, 2619
NmuCI GTSAC 3 cut(s) 259, 972, 2044
NsiI ATGCAT 1 cut(s) 1692
NspI RCATGY 2 cut(s) 1324, 2102
NspV TTCGAA 1 cut(s) 267
PaeR7I CTCGAG 1 cut(s) 1223
PciSI GCTCTTC 1 cut(s) 1287
PdiI GCCGGC 1 cut(s) 1642
PdmI GAANNNNTTC 1 cut(s) 1869
PfeI GAWTC 6 cut(s) 169, 502, 702, 778, 1277, 1505
PflFI GACNNNGTC 1 cut(s) 927
PflMI CCANNNNNTGG 1 cut(s) 2178
PkrI GCNGC 5 cut(s) 1029, 1566, 1804, 1834, 2203
PleI GAGTC 5 cut(s) 128, 221, 548, 979, 1795
PluTI GGCGCC 1 cut(s) 1183
PpsI GAGTC 5 cut(s) 128, 221, 548, 979, 1795
PshAI GACNNNNGTC 1 cut(s) 1914
Psp124BI GAGCTC 1 cut(s) 1494
Psp6I CCWGG 3 cut(s) 571, 2069, 2605
PspFI CCCAGC 2 cut(s) 746, 2564
PspGI CCWGG 3 cut(s) 571, 2069, 2605
PspN4I GGNNCC 6 cut(s) 577, 668, 1181, 1973, 2316, 2571
PspPI GGNCC 3 cut(s) 667, 1268, 1750
PspXI VCTCGAGB 1 cut(s) 1223
PstI CTGCAG 3 cut(s) 259, 1111, 1879
PstNI CAGNNNCTG 2 cut(s) 2057, 2606
PsuI RGATCY 4 cut(s) 1759, 1879, 2149, 2314
PsyI GACNNNGTC 1 cut(s) 927
PvuII CAGCTG 2 cut(s) 746, 2453
RseI CAYNNNNRTG 2 cut(s) 207, 584
SacI GAGCTC 1 cut(s) 1494
SalI GTCGAC 2 cut(s) 224, 323
SapI GCTCTTC 1 cut(s) 1287
SaqAI TTAA 6 cut(s) 59, 174, 627, 1208, 2016, 2540
SatI GCNGC 5 cut(s) 1028, 1565, 1803, 1833, 2202
Sau3AI GATC 7 cut(s) 199, 676, 1759, 1879, 2104, 2149, 2314
Sau96I GGNCC 3 cut(s) 667, 1268, 1750
ScaI AGTACT 3 cut(s) 400, 462, 2327
SchI GAGTC 5 cut(s) 129, 221, 548, 980, 1796
ScrFI CCNGG 3 cut(s) 573, 2071, 2607
SduI GDGCHC 3 cut(s) 196, 1494, 1974
SfaNI GCATC 6 cut(s) 72, 558, 1520, 1531, 1585, 1699
SfcI CTRYAG 5 cut(s) 255, 386, 448, 1107, 1875
SfoI GGCGCC 1 cut(s) 1181
Sfr274I CTCGAG 1 cut(s) 1223
SfuI TTCGAA 1 cut(s) 267
SinI GGWCC 2 cut(s) 667, 1268
SlaI CTCGAG 1 cut(s) 1223
SmiMI CAYNNNNRTG 2 cut(s) 207, 584
SmlI CTYRAG 4 cut(s) 58, 1223, 1272, 1286
SmoI CTYRAG 4 cut(s) 58, 1223, 1272, 1286
SsiI CCGC 5 cut(s) 161, 243, 1075, 2248, 2291
SspDI GGCGCC 1 cut(s) 1179
SspI AATATT 1 cut(s) 298
SspMI CTAG 8 cut(s) 641, 717, 921, 1008, 1250, 1364, 1412, 2118
SstI GAGCTC 1 cut(s) 1494
StyD4I CCNGG 3 cut(s) 571, 2069, 2605
StyI CCWWGG 1 cut(s) 895
TaaI ACNGT 6 cut(s) 289, 530, 586, 842, 1072, 2644
TaiI ACGT 1 cut(s) 159
TatI WGTACW 6 cut(s) 398, 460, 879, 2325, 2367, 2415
TfiI GAWTC 6 cut(s) 169, 502, 702, 778, 1277, 1505
Tru1I TTAA 6 cut(s) 59, 174, 627, 1208, 2016, 2540
Tru9I TTAA 6 cut(s) 59, 174, 627, 1208, 2016, 2540
TscAI CASTG 8 cut(s) 264, 292, 591, 984, 1606, 1628, 2464, 2496
TseFI GTSAC 3 cut(s) 259, 972, 2044
TseI GCWGC 5 cut(s) 1027, 1564, 1802, 1832, 2201
Tsp45I GTSAC 3 cut(s) 259, 972, 2044
TspRI CASTG 8 cut(s) 264, 292, 591, 984, 1606, 1628, 2464, 2496
Tth111I GACNNNGTC 1 cut(s) 927
Van91I CCANNNNNTGG 1 cut(s) 2178
Vha464I CTTAAG 1 cut(s) 58
VpaK11BI GGWCC 2 cut(s) 667, 1268
XapI RAATTY 1 cut(s) 986
XbaI TCTAGA 1 cut(s) 1411
XceI RCATGY 2 cut(s) 1324, 2102
XcmI CCANNNNNNNNNTGG 1 cut(s) 1813
XhoI CTCGAG 1 cut(s) 1223
XmiI GTMKAC 2 cut(s) 225, 324
XmnI GAANNNNTTC 1 cut(s) 1869
XspI CTAG 8 cut(s) 641, 717, 921, 1008, 1250, 1364, 1412, 2118
ZrmI AGTACT 3 cut(s) 400, 462, 2327
Zsp2I ATGCAT 1 cut(s) 1692
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.