Rh5DG063500

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000650
Physical Location & Seq
Reverse (-)
5445455 .. 5465981
20527 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG063500.1

Sequence Viewer

Length: 2121 bp
ATGGCAAGAAACATTATGGACACATTTGCAGTAGAAGCATTACCTCTGAATATTAGGAGGCATCATTATAACATGCACCCTTCTAGTTTCGCCATTAATTTCATTTGTTCAACGAAGAGGAGATGGCATCCAAGTGAGAGAAGGAAAGTGGCGGCCGCCCGTGCTCGTTCGGATCATATACCAGCATCCACCGCCGTTGCTGTTGGAGTTGCTGCAGAGAACGAGAAGCAGCAGCCTTTGGAACTCGCAGCAGGATCCGTTGATGTTGTAGTTGATGCGGCTTCAGAGAATGTGAAGCACCAGCCTGCAGTGACTTTGGAACTCACTGCACTAGTCACTGTCAAAAGGAAAAGTGAAAATAAGTTAAATACCCTGAAAGAGATAATGCTTAGGCGGTTTGGCAATTATGCTTCACATAATGGCCATGGTGATCATCATAATCACAAGGGTGTTGTGCTACAGCTTGTTAGTACTCAAATCCACACAAAGGAAATGAAGCCAAACCTGAGTGAGGAAGCTATATTGGATTGGACAAGGAATTTGAAAATGGGTGCGGGGAAGACCAGTACTTACCAAGTTAAATTTGTGGTGGATTCTAACTTTGGGATGCCGGGAGCCATCACGGTTAGCAACAGAGACCGAAGCGAGTTCTATTTGGATAGCATCAACATTGAAGGTGCTATTAATTTTGCCTGCAACTCTTGGGTTCAACCAGAGTGCGAAAACCCTGCAAAAAGAATCTTCTTCTCTACCAATAAGGCATACTTACCTAGTGAAACACCAGCAGGGCTGAAAGAACTAAGAAAAATGGAGCTAACTCAACTGAGGGGTGATGGAACAGGATTTCGAAAACTATCTGATAGAATATACGACTATGACACTTACAATGACATTGGAAATCCAGATCTGGGAGATGGATACATAAGGCCCATCCTTGGAGGCAACAAACAGCCACACCCAAGACGCTGTCGAACTGGAAGGCCTCGAACCAAGACAGATGAGAATCTGGAGTCACCAGTAAATGAATTCCTGATGGCCTATGTACCTAGAGATGAAGAGTTTGAGGAGTCCAAGATAGAATCTCTTGATCTTGGAAAGTTAAAGGCAATTCTGAGGCACATTATTCCTATACTAACAACAGTCACCAGGAATACTGCTGTTTTCAAGGTCCATTCAGATATCAGAGATCTGTATAGGGATATATCTTCGGTCGAAATGAACACTAAGATGAATCTTTCATGGGCAAATATATTCAACAAAGTTCAGGAATTCCTCAAATTCGATCCTCCAAAGTTAGACAAAAGGATCACATCTTGTTGTTTCCCAGATGACGAGTTTGGCCGTCAAGCACTTGCAGGCATAAATCCTCTAAGCATAGAGAGGCTCACAACTTTCCCACCTGTAAGCAAACTGAATGCCTCAACTAATGGCCCACAAGAATCGGCACTCAAGGAAGAACATATACTAGGCCATCTAAATGGCATGTCTGTGCAACAGGCATTGGAAGAAAACAAGCTGTTCATACTAGACTATCATGACATTTTCCATCCGTTTATCAACCAAATAAATGCTATGGATGACCGAAAAGCTTATGCAACACGTACAATTTTCTTCCTCACCCCATTGGGAACATTGAAGCCCATTGCTATTGAGCTCAGTCTCCATCAAACCAATTCAAATTCACCATCCAGGCAGGTTCTCACTCCTCCAGTTGATGCTACAACATTTTGGCTTTGGGAACTTGGCAAAGCCCATGTATGCTCCAATGATTCCTGCGTTCATCAACTCATTCATCACTGGTTACGCAGCCATGCGTGTATGGAAACATTTATCATAGCAACCCACCGGCAGCTGAGTGCGATGCATCCCATCTACAGGCTTCTCAAACCTCACATGCAATACACAATGAAGATAAATGCATTGGCCTGTCAGTTTCTGATCAATTCTGAAGGAATAATTGAGTCTACTTTCACTGCTGGCAAACATAGCATGGAGATTAGTTGTGCTGCATATCGAGACTGGTGGCGTTTTGACCTTGAGGGCCTTCCTGCAGATCTCATCAGAAGGTACATAATTAATTTCAAAAGACTTTCACTCAATTTATATAGTCATCGTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110
Pfam Domains
Protein Families
Lipoxygenase PLAT

Protein Analysis

706

Amino Acids

80.35

Weight (kDa)

8.75

Isoelectric Point (pI)

54.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PLAT PF01477 170 - 249 6.3e-08 PLAT/LH2 domain
Lipoxygenase PF00305 263 - 691 7.8e-173 Lipoxygenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 69
Acc36I ACCTGC 1 cut(s) 1684
AccI GTMKAC 1 cut(s) 1964
AciI CCGC 6 cut(s) 152, 156, 192, 278, 394, 554
AclWI GGATC 5 cut(s) 180, 249, 262, 1277, 1313
AcoI YGGCCR 3 cut(s) 153, 421, 1339
AcsI RAATTY 6 cut(s) 538, 581, 1025, 1268, 1277, 1678
AcuI CTGAAG 2 cut(s) 267, 1968
AfaI GTAC 5 cut(s) 472, 568, 1044, 1603, 2069
AfiI CCNNNNNNNGG 5 cut(s) 487, 511, 908, 935, 1875
AflIII ACRYGT 1 cut(s) 1598
AgsI TTSAA 9 cut(s) 111, 544, 674, 710, 1165, 1255, 1636, 1677, 2083
AhlI ACTAGT 1 cut(s) 331
AjnI CCWGG 2 cut(s) 1145, 1688
AleI CACNNNNGTG 1 cut(s) 447
AluBI AGCT 7 cut(s) 463, 518, 814, 1516, 1589, 1654, 1852
AluI AGCT 7 cut(s) 463, 518, 814, 1516, 1589, 1654, 1852
Alw21I GWGCWC 2 cut(s) 166, 1656
Alw26I GTCTC 3 cut(s) 630, 1664, 2010
AlwI GGATC 5 cut(s) 180, 249, 262, 1277, 1313
AlwNI CAGNNNCTG 1 cut(s) 1936
ApeKI GCWGC 7 cut(s) 212, 229, 232, 248, 1806, 1849, 2006
ApoI RAATTY 6 cut(s) 538, 581, 1025, 1268, 1277, 1678
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
AseI ATTAAT 3 cut(s) 96, 684, 2076
AspS9I GGNCC 4 cut(s) 927, 1168, 1430, 2041
AsuC2I CCSGG 1 cut(s) 612
AsuHPI GGTGA 6 cut(s) 440, 842, 1005, 1135, 1609, 1674
AsuII TTCGAA 1 cut(s) 847
AvaII GGWCC 1 cut(s) 1168
BalI TGGCCA 1 cut(s) 423
BamHI GGATCC 1 cut(s) 254
BanII GRGCYC 1 cut(s) 1656
BarI GAAGNNNNNNTAC 2 cut(s) 1446, 1478
BbsI GAAGAC 1 cut(s) 566
Bbv12I GWGCWC 2 cut(s) 166, 1656
BbvI GCAGC 7 cut(s) 199, 241, 244, 260, 1818, 1861, 1993
BceAI ACGGC 2 cut(s) 179, 1326
BcgI CGANNNNNNTGC 2 cut(s) 710, 744
BciT130I CCWGG 2 cut(s) 1147, 1690
BciVI GTATCC 1 cut(s) 911
BclI TGATCA 2 cut(s) 430, 1938
BcnI CCSGG 1 cut(s) 612
BcoDI GTCTC 3 cut(s) 630, 1664, 2010
BcuI ACTAGT 1 cut(s) 331
BfaI CTAG 6 cut(s) 84, 332, 771, 1047, 1466, 1526
BfmI CTRYAG 5 cut(s) 213, 306, 458, 1873, 2049
BfuAI ACCTGC 1 cut(s) 1684
BfuI GTATCC 1 cut(s) 911
BglII AGATCT 3 cut(s) 904, 1186, 2053
BmcAI AGTACT 2 cut(s) 472, 568
Bme1390I CCNGG 3 cut(s) 612, 1147, 1690
Bme18I GGWCC 1 cut(s) 1168
BmgT120I GGNCC 4 cut(s) 927, 1168, 1430, 2041
BmiI GGNNCC 2 cut(s) 256, 616
BmrFI CCNGG 3 cut(s) 612, 1147, 1690
BmsI GCATC 9 cut(s) 70, 136, 194, 265, 597, 672, 1705, 1851, 1873
BpiI GAAGAC 1 cut(s) 566
BpmI CTGGAG 2 cut(s) 1028, 1692
Bpu10I CCTNAGC 1 cut(s) 389
Bpu14I TTCGAA 1 cut(s) 847
BpuEI CTTGAG 2 cut(s) 1433, 2057
BpuMI CCSGG 1 cut(s) 612
BsaAI YACGTR 1 cut(s) 1601
BsaBI GATNNNNATC 1 cut(s) 1002
BsaI GGTCTC 1 cut(s) 630
BsaJI CCNNGG 2 cut(s) 424, 934
Bsc4I CCNNNNNNNGG 5 cut(s) 487, 511, 908, 935, 1875
Bse118I RCCGGY 1 cut(s) 1845
Bse1I ACTGG 6 cut(s) 564, 979, 1016, 1709, 1802, 2024
Bse3DI GCAATG 1 cut(s) 1641
Bse8I GATNNNNATC 1 cut(s) 1002
BseBI CCWGG 2 cut(s) 1147, 1690
BseDI CCNNGG 2 cut(s) 424, 934
BseGI GGATG 8 cut(s) 127, 185, 612, 930, 1546, 1582, 1685, 1864
BseJI GATNNNNATC 1 cut(s) 1002
BseLI CCNNNNNNNGG 5 cut(s) 487, 511, 908, 935, 1875
BseMI GCAATG 1 cut(s) 1641
BseMII CTCAG 5 cut(s) 497, 815, 1103, 1669, 1844
BseNI ACTGG 6 cut(s) 564, 979, 1016, 1709, 1802, 2024
BseRI GAGGAG 3 cut(s) 133, 1079, 1695
BseX3I CGGCCG 1 cut(s) 153
BseXI GCAGC 7 cut(s) 199, 241, 244, 260, 1818, 1861, 1993
BsgI GTGCAG 1 cut(s) 312
Bsh1285I CGRYCG 2 cut(s) 156, 1212
BsiEI CGRYCG 2 cut(s) 156, 1212
BsiHKAI GWGCWC 2 cut(s) 166, 1656
BsiSI CCGG 2 cut(s) 611, 1846
BslI CCNNNNNNNGG 5 cut(s) 487, 511, 908, 935, 1875
BsmAI GTCTC 3 cut(s) 630, 1664, 2010
BsmI GAATGC 1 cut(s) 1420
Bso31I GGTCTC 1 cut(s) 630
Bsp119I TTCGAA 1 cut(s) 847
Bsp1286I GDGCHC 2 cut(s) 166, 1656
Bsp19I CCATGG 1 cut(s) 424
BspACI CCGC 6 cut(s) 152, 156, 192, 278, 394, 554
BspCNI CTCAG 5 cut(s) 498, 816, 1104, 1668, 1845
BspHI TCATGA 1 cut(s) 1534
BspLI GGNNCC 2 cut(s) 256, 616
BspMAI CTGCAG 3 cut(s) 217, 310, 2053
BspMI ACCTGC 1 cut(s) 1684
BspPI GGATC 5 cut(s) 180, 249, 262, 1277, 1313
BspT104I TTCGAA 1 cut(s) 847
BspTNI GGTCTC 1 cut(s) 630
BsrDI GCAATG 1 cut(s) 1641
BsrFI RCCGGY 1 cut(s) 1845
BsrI ACTGG 6 cut(s) 564, 979, 1016, 1709, 1802, 2024
BssAI RCCGGY 1 cut(s) 1845
BssECI CCNNGG 2 cut(s) 424, 934
BssT1I CCWWGG 2 cut(s) 424, 934
Bst2UI CCWGG 2 cut(s) 1147, 1690
Bst4CI ACNGT 3 cut(s) 340, 625, 1141
Bst6I CTCTTC 2 cut(s) 110, 1050
BstBAI YACGTR 1 cut(s) 1601
BstBI TTCGAA 1 cut(s) 847
BstC8I GCNNGC 4 cut(s) 306, 694, 1357, 1978
BstDEI CTNAG 9 cut(s) 389, 506, 800, 824, 1112, 1224, 1370, 1655, 1853
BstDSI CCRYGG 1 cut(s) 424
BstENI CCTNNNNNAGG 1 cut(s) 509
BstF5I GGATG 8 cut(s) 127, 185, 612, 930, 1546, 1582, 1685, 1864
BstMAI GTCTC 3 cut(s) 630, 1664, 2010
BstMCI CGRYCG 2 cut(s) 156, 1212
BstMWI GCNNNNNNNGC 4 cut(s) 35, 161, 191, 1986
BstNI CCWGG 2 cut(s) 1147, 1690
BstNSI RCATGY 3 cut(s) 76, 1486, 1897
BstSCI CCNGG 3 cut(s) 610, 1145, 1688
BstSFI CTRYAG 5 cut(s) 213, 306, 458, 1873, 2049
BstV1I GCAGC 7 cut(s) 199, 241, 244, 260, 1818, 1861, 1993
BstV2I GAAGAC 1 cut(s) 566
BstX2I RGATCY 4 cut(s) 254, 904, 1186, 2053
BstXI CCANNNNNNTGG 1 cut(s) 1478
BstYI RGATCY 4 cut(s) 254, 904, 1186, 2053
BstZI CGGCCG 1 cut(s) 153
BsuI GTATCC 1 cut(s) 911
BtgI CCRYGG 1 cut(s) 424
BtgZI GCGATG 1 cut(s) 1874
BtsCI GGATG 8 cut(s) 127, 185, 612, 930, 1546, 1582, 1685, 1864
BtsI GCAGTG 3 cut(s) 315, 324, 1971
BtsIMutI CAGTG 5 cut(s) 315, 324, 336, 1795, 1971
BveI ACCTGC 1 cut(s) 1684
Cac8I GCNNGC 4 cut(s) 306, 694, 1357, 1978
CaiI CAGNNNCTG 1 cut(s) 1936
CciI TCATGA 1 cut(s) 1534
CciNI GCGGCCGC 1 cut(s) 153
Cfr10I RCCGGY 1 cut(s) 1845
Cfr13I GGNCC 4 cut(s) 927, 1168, 1430, 2041
CseI GACGC 1 cut(s) 972
Csp6I GTAC 5 cut(s) 471, 567, 1043, 1602, 2068
CspCI CAANNNNNGTGG 2 cut(s) 178, 213
CviAII CATG 9 cut(s) 73, 425, 1239, 1483, 1535, 1754, 1811, 1894, 1990
CviQI GTAC 5 cut(s) 471, 567, 1043, 1602, 2068
DdeI CTNAG 9 cut(s) 389, 506, 800, 824, 1112, 1224, 1370, 1655, 1853
EaeI YGGCCR 3 cut(s) 153, 421, 1339
EagI CGGCCG 1 cut(s) 153
Eam1104I CTCTTC 2 cut(s) 110, 1050
EarI CTCTTC 2 cut(s) 110, 1050
Ecl136II GAGCTC 1 cut(s) 1654
EclXI CGGCCG 1 cut(s) 153
Eco130I CCWWGG 2 cut(s) 424, 934
Eco147I AGGCCT 1 cut(s) 982
Eco24I GRGCYC 1 cut(s) 1656
Eco31I GGTCTC 1 cut(s) 630
Eco32I GATATC 1 cut(s) 1180
Eco47I GGWCC 1 cut(s) 1168
Eco52I CGGCCG 1 cut(s) 153
Eco53kI GAGCTC 1 cut(s) 1654
Eco57I CTGAAG 2 cut(s) 267, 1968
EcoICRI GAGCTC 1 cut(s) 1654
EcoNI CCTNNNNNAGG 1 cut(s) 509
EcoO109I RGGNCCY 1 cut(s) 2041
EcoRI GAATTC 2 cut(s) 1025, 1268
EcoRII CCWGG 2 cut(s) 1145, 1688
EcoRV GATATC 1 cut(s) 1180
EcoT14I CCWWGG 2 cut(s) 424, 934
EcoT22I ATGCAT 2 cut(s) 1866, 1921
EcoT38I GRGCYC 1 cut(s) 1656
ErhI CCWWGG 2 cut(s) 424, 934
FaeI CATG 9 cut(s) 76, 428, 1242, 1486, 1538, 1757, 1814, 1897, 1993
FalI AAGNNNNNCTT 2 cut(s) 749, 781
FatI CATG 9 cut(s) 72, 424, 1238, 1482, 1534, 1753, 1810, 1893, 1989
FauI CCCGC 1 cut(s) 547
FbaI TGATCA 2 cut(s) 430, 1938
FblI GTMKAC 1 cut(s) 1964
FokI GGATG 8 cut(s) 114, 172, 619, 917, 1533, 1589, 1672, 1851
FriOI GRGCYC 1 cut(s) 1656
FspBI CTAG 6 cut(s) 84, 332, 771, 1047, 1466, 1526
GsuI CTGGAG 2 cut(s) 1028, 1692
HapII CCGG 2 cut(s) 611, 1846
HgaI GACGC 1 cut(s) 972
Hin1II CATG 9 cut(s) 76, 428, 1242, 1486, 1538, 1757, 1814, 1897, 1993
HindIII AAGCTT 1 cut(s) 1587
HpaII CCGG 2 cut(s) 611, 1846
HphI GGTGA 6 cut(s) 440, 842, 1005, 1135, 1609, 1674
Hpy166II GTNNAC 1 cut(s) 1965
Hpy188III TCNNGA 7 cut(s) 902, 1007, 1030, 1085, 1265, 1535, 2015
Hpy8I GTNNAC 1 cut(s) 1965
HpyAV CCTTC 7 cut(s) 90, 135, 668, 972, 1943, 2054, 2058
HpyCH4III ACNGT 3 cut(s) 340, 625, 1141
HpyCH4IV ACGT 1 cut(s) 1600
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 161, 191, 1986
HpyF3I CTNAG 9 cut(s) 389, 506, 800, 824, 1112, 1224, 1370, 1655, 1853
HpySE526I ACGT 1 cut(s) 1600
Hsp92II CATG 9 cut(s) 76, 428, 1242, 1486, 1538, 1757, 1814, 1897, 1993
Ksp22I TGATCA 2 cut(s) 430, 1938
LmnI GCTCC 3 cut(s) 614, 811, 1766
Lsp1109I GCAGC 7 cut(s) 199, 241, 244, 260, 1818, 1861, 1993
LweI GCATC 9 cut(s) 70, 136, 194, 265, 597, 672, 1705, 1851, 1873
MaeI CTAG 6 cut(s) 84, 332, 771, 1047, 1466, 1526
MaeII ACGT 1 cut(s) 1600
MaeIII GTNAC 5 cut(s) 310, 334, 1011, 1141, 1800
MflI RGATCY 4 cut(s) 254, 904, 1186, 2053
MhlI GDGCHC 2 cut(s) 166, 1656
MlsI TGGCCA 1 cut(s) 423
MluNI TGGCCA 1 cut(s) 423
MlyI GAGTC 3 cut(s) 1019, 1076, 1970
MmeI TCCRAC 1 cut(s) 184
Mox20I TGGCCA 1 cut(s) 423
Mph1103I ATGCAT 2 cut(s) 1866, 1921
MscI TGGCCA 1 cut(s) 423
MseI TTAA 6 cut(s) 96, 365, 579, 684, 1100, 2076
MslI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
Msp20I TGGCCA 1 cut(s) 423
MspA1I CMGCKG 1 cut(s) 1852
MspI CCGG 2 cut(s) 611, 1846
MspR9I CCNGG 3 cut(s) 612, 1147, 1690
Mva1269I GAATGC 1 cut(s) 1420
MvaI CCWGG 2 cut(s) 1147, 1690
MwoI GCNNNNNNNGC 4 cut(s) 35, 161, 191, 1986
NciI CCSGG 1 cut(s) 612
NcoI CCATGG 1 cut(s) 424
NlaIII CATG 9 cut(s) 76, 428, 1242, 1486, 1538, 1757, 1814, 1897, 1993
NlaIV GGNNCC 2 cut(s) 256, 616
NmuCI GTSAC 4 cut(s) 310, 334, 1011, 1141
NotI GCGGCCGC 1 cut(s) 153
NsiI ATGCAT 2 cut(s) 1866, 1921
NspI RCATGY 3 cut(s) 76, 1486, 1897
NspV TTCGAA 1 cut(s) 847
OliI CACNNNNGTG 1 cut(s) 447
PagI TCATGA 1 cut(s) 1534
PceI AGGCCT 1 cut(s) 982
PctI GAATGC 1 cut(s) 1420
PfeI GAWTC 7 cut(s) 593, 738, 1003, 1079, 1231, 1439, 1769
PflFI GACNNNGTC 1 cut(s) 966
PleI GAGTC 3 cut(s) 1018, 1075, 1969
PpsI GAGTC 3 cut(s) 1018, 1075, 1969
Ppu21I YACGTR 1 cut(s) 1601
PshBI ATTAAT 3 cut(s) 96, 684, 2076
PsiI TTATAA 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 1656
Psp6I CCWGG 2 cut(s) 1145, 1688
PspGI CCWGG 2 cut(s) 1145, 1688
PspN4I GGNNCC 2 cut(s) 256, 616
PspPI GGNCC 4 cut(s) 927, 1168, 1430, 2041
PstI CTGCAG 3 cut(s) 217, 310, 2053
PstNI CAGNNNCTG 1 cut(s) 1936
PsuI RGATCY 4 cut(s) 254, 904, 1186, 2053
PsyI GACNNNGTC 1 cut(s) 966
PvuII CAGCTG 1 cut(s) 1852
RsaI GTAC 5 cut(s) 472, 568, 1044, 1603, 2069
RsaNI GTAC 5 cut(s) 471, 567, 1043, 1602, 2068
RseI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
SacI GAGCTC 1 cut(s) 1656
SaqAI TTAA 6 cut(s) 96, 365, 579, 684, 1100, 2076
Sau96I GGNCC 4 cut(s) 927, 1168, 1430, 2041
ScaI AGTACT 2 cut(s) 472, 568
SchI GAGTC 3 cut(s) 1019, 1076, 1970
ScrFI CCNGG 3 cut(s) 612, 1147, 1690
SduI GDGCHC 2 cut(s) 166, 1656
SfaNI GCATC 9 cut(s) 70, 136, 194, 265, 597, 672, 1705, 1851, 1873
SfcI CTRYAG 5 cut(s) 213, 306, 458, 1873, 2049
SfuI TTCGAA 1 cut(s) 847
SinI GGWCC 1 cut(s) 1168
SmiMI CAYNNNNRTG 5 cut(s) 132, 447, 1226, 1476, 1487
SmlI CTYRAG 2 cut(s) 1448, 2036
SmoI CTYRAG 2 cut(s) 1448, 2036
SpeI ACTAGT 1 cut(s) 331
SseBI AGGCCT 1 cut(s) 982
SsiI CCGC 6 cut(s) 152, 156, 192, 278, 394, 554
SspI AATATT 1 cut(s) 52
SspMI CTAG 6 cut(s) 84, 332, 771, 1047, 1466, 1526
SstI GAGCTC 1 cut(s) 1656
StuI AGGCCT 1 cut(s) 982
StyD4I CCNGG 3 cut(s) 610, 1145, 1688
StyI CCWWGG 2 cut(s) 424, 934
TaaI ACNGT 3 cut(s) 340, 625, 1141
TaiI ACGT 1 cut(s) 1603
TaqI TCGA 6 cut(s) 847, 970, 985, 1212, 1281, 2014
TaqII GACCGA 3 cut(s) 654, 1198, 1596
TatI WGTACW 2 cut(s) 470, 566
TauI GCSGC 3 cut(s) 155, 158, 281
TfiI GAWTC 7 cut(s) 593, 738, 1003, 1079, 1231, 1439, 1769
Tru1I TTAA 6 cut(s) 96, 365, 579, 684, 1100, 2076
Tru9I TTAA 6 cut(s) 96, 365, 579, 684, 1100, 2076
TscAI CASTG 5 cut(s) 315, 331, 343, 1802, 1978
TseFI GTSAC 4 cut(s) 310, 334, 1011, 1141
TseI GCWGC 7 cut(s) 212, 229, 232, 248, 1806, 1849, 2006
Tsp45I GTSAC 4 cut(s) 310, 334, 1011, 1141
TspGWI ACGGA 2 cut(s) 247, 1539
TspRI CASTG 5 cut(s) 315, 331, 343, 1802, 1978
Tth111I GACNNNGTC 1 cut(s) 966
VpaK11BI GGWCC 1 cut(s) 1168
VspI ATTAAT 3 cut(s) 96, 684, 2076
XagI CCTNNNNNAGG 1 cut(s) 509
XapI RAATTY 6 cut(s) 538, 581, 1025, 1268, 1277, 1678
XceI RCATGY 3 cut(s) 76, 1486, 1897
XmiI GTMKAC 1 cut(s) 1964
XspI CTAG 6 cut(s) 84, 332, 771, 1047, 1466, 1526
ZrmI AGTACT 2 cut(s) 472, 568
Zsp2I ATGCAT 2 cut(s) 1866, 1921
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.