Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0000650

Physical Location & Seq

Genomic Coordinates Forward (+)

15546939 .. 15551560

Gene Structure 4622 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1180900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2718 bp

ATGGCACTGACTAAACAAATCATGGGCAGTTCTCTGATTGAAAAATCCGAGTTTTTTTCATCATCTTATAAGTTGTTTTTGGCAAGACCAAGTTTGGTGCCTTCGCAGAGGACGGCGGTGCATTTGAGAAGGTCACAGAGGGGTCCTTTGGCGGCCATAAGTGAAGATTTGGTGAAGATTGTGCCTGTTTTTTCTGCTGAGAAGCCTGTGAAGTTCAAGGTGAGAGCTGTTGTGACTGTGAGGAATAAGAACAAGGAGGATTTTAAGGAGGCCATTTCCAAACACTTGGATTCCCTCGCTGACCAAATTGGTAGAAATGTTGTTTTGGAGCTTATCAGTACAGAATTAGACCCAAGAACAAAGGCTCCCAGGAAAAGCAGTGAAGGTGTGGTAAAAGATTGGTCTAAAAAATCAAATCTCAAGGCAGAGAGGGTGAATTACACAGCTGAGTTTATGGTGGACTCAAATTTTGGCGTCCCAGGAGCAATCACAGTTACAAACAAGCACCAAAACGAGTTCTTTCTGGAGACCATAACCCTTGAAGGTTTTGCCTGCGGTCCACTGCATTTTCCTGTAAATTCCTGGATTCAATCTAAGAAAGATCACCCTGGGAAAAGAATAGTCTTCTGCAACAAGCCATATTTACCAGACCAGACCCCTGATGGGCTTAAGGAACTGAGACAGAGGGAGTTGAAGAATCTGAGGGGTGATGGCAGTGGAGTTAGAAAATTATCAGATAGGATCTATGACTATGGTTTGTATAATGATTTGGGAAATCCTGATAAGGGAATCGACTTTGCTAGGCCTACACTTGGTAAAAAAATCCCCTACCCAAGAAGATGTCGCACTGGTCGCCTCCCTACAGATACTGATATGCAAGCGGAGAGCAGGGTTGAGAAGCCACTACCAATGTATGTGCCAAGAGATGAACAATTTGAAGAGTCAAAAATGGACACATTTTCATTTGGGAGGCTCAAGGGTGTTCTTCACAACTTGATCCCCACCCTTATGTCCAGCTTCAAAGCTGACAAAGACTTCCGTGGATACTCCGACATCGACAGCCTCTACAGTGAAGGCGTCCTCCTCAAATTGGGTTTGAAGGATGAATTCCTAAAGAAGCTTCCGTTGCCAAGTATGGTCAGCAAATTCCAGGACTATAACCAGGGCGTTCTCAAATATGACACCCCCAAGATCTTAAGCAAGGACAGGTTGGTTTGGTTGCGAGATGACGAATTCGGCCGCCAAGCAGTTGCAGGGGTTAATCCATTAAGCATTCAGAGGCTTAAGGTTTTTCCACCGGAAAGCAAACTTGATGCTGTGGTTTATGGGCCATTAGAGTCTGCTCTCAAAGAAGAACACATCTTACCGAATCTCTATGGCATGACTGTTCAACAGGCATTGGATGAGAACAAGTTGTACATAGTGGATTACCATGACGTATACCTTCCATTTCTTGATCGGATTAATGCTCTGGATGGGAGAAAAGCATATGCAACTCGTACCATTTATTTCTTGACACCTACTGGAGCTCTGAAGCCCATCGCCATTGAGCTTACCCTCCCCAATACAGGACCAAGTTCAAGATCAAAGCGTGTTTTGACACCTGCTGTCGACGCCACCACCAACTGGATGTGGATGCTTGCTAAGGCGCATGTCTGCGCCAATGACGCCGGCGTCCACCAACTCGTACACCATTGGCTACGTACCCATGCTACCCTAGAGCCGTTTATCTTGGCAGCACATAGACAGTTGAGCGCAATGCACCCGATTTACAAGCTTTTGGATCCTCACATGAGATACACACTAGAGATCAATGCACTGGCTCGCCAGAGCTTGATCAGCGCTGATGGTGTCATCGAGTCATGCTTCACTCCAGGTCGGTATGCCATGGAAATCAGTGCTTCAGCGTACAAAACCTGGCGCTTTGACCATCAAAGCCTTCCTGCAGATCTTGTACAAAGGGGCATGGCAGTGCCTGATCCAACACAACCCCATGGTGTGAAACTTGTAATGGAAGACTACCCATATGGCAGTGACGGATTACTCATCTGGGGTGCAATCGAGAACTGGGTTCGAACCTACGTGCACCACTACTACCCCGATTCAAGTGTAATCCGAAAAGACAGAGAGCTGCAAGCATGGTACTGGGAGTCCATCAATGTAGGTCACGCTGATCTCCGCCATGAAACCTGGTGGCCTTTACTGTCCACAGCAGATGACCTAGTCTCAATCCTCAGCACATTGATCTGGCTAGCATCAGCTCAACATGCGGCACTTAATTTTGCACAGTACCCTTATGGAGGTTACGTCCCCAACAGGCCACCCCTGATGAGAAGATTGATCCCGGAAGAGGGTGACCCAGAATACGCAAATTTCATATCAGACCCACAAAAGTTCTTTCTCTCAGCTTTGCCAAGCGTCCTGGAAGCCACAAAATACATGGCTGTGGTGGACACATTATCGACACATTCGCCGGATGAGGAGTACCTCGGGGAGAGGCAGCAACCGTCTACTTGGTCAGGGGATGCTGATGCGGTGGAGGCATTTTACAAGTTTTCTGCGGAGATTAGAGAGATTGAGAAGGAGATTGATAGGAGGAATAGTGATCCAAATCTTAAACACAGGTGTGGAGCAGGAGTTTTGCCTTATGAGTTGCTTGTACCAAGTTCCGACCCTGGGATTACATGTCGTGGTGTGCCTAATAGTATTTCGATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000302 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006629 GO:0006950 GO:0006979 GO:0007275 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009534 GO:0009536 GO:0009555 GO:0009570 GO:0009579 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009628 GO:0009642 GO:0009644 GO:0009719 GO:0009725 GO:0009753 GO:0009791 GO:0009900 GO:0009901 GO:0009908 GO:0009987 GO:0010033 GO:0010035 GO:0010193 GO:0016165 GO:0016491 GO:0016701 GO:0016702 GO:0022414 GO:0030258 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0032504 GO:0034440 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046677 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048608 GO:0048609 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050896 GO:0051213 GO:0051704 GO:0051707 GO:0055114 GO:0061458 GO:0071704 GO:0080086 GO:0090567 GO:0099402 GO:1901700

KEGG Pathways

Metabolic & Signaling

ko00591 ko00592 ko01100 ko01110 map00591 map00592 map01100 map01110

Pfam Domains

Protein Families

Lipoxygenase PLAT

Protein Analysis

906

Amino Acids

102.48

Weight (kDa)

7.94

Isoelectric Point (pI)

38.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLAT	PF01477	133 - 209	6.9e-11	PLAT/LH2 domain
Lipoxygenase	PF00305	222 - 888	1.4e-302	Lipoxygenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Orthologous Genes (Group: OG0000650)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17420 AT1G72520
fragaria_vesca	FvH4_4g01390 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970 FvH4_6g34970
malus_domestica	MD05G1339200.v1.1 MD05G1339300.v1.1 MD05G1339400.v1.1 MD09G1180900.v1.1 MD10G1294000.v1.1 MD17G1167100.v1.1
prunus_persica	Prupe.3G039200_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1 Prupe.4G047800_v2.0.a1
pyrus_communis	pycom09g09820 pycom09g09830 pycom10g24590 pycom17g15900
rosa_chinensis	RchiOBHm_Chr2g0145961 RchiOBHm_Chr3g0472481 RchiOBHm_Chr5g0008481 RchiOBHm_Chr5g0008501 RchiOBHm_Chr5g0008511
rosa_laevigata	RLG00000020179 RLG00000024076 RLG00000031573 RLG00000031574 RLG00000031576
rosa_multiflora	Rmu_sc0001665.1_g000013 Rmu_sc0001702.1_g000033 Rmu_sc0002145.1_g000002 Rmu_sc0034682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434820 Rroxscaffold_2G00100350
rosa_rugosa	Rorug02G0393500 Rorug03G0125900 Rorug04G0435900.1 Rorug04G0436000 Rorug04G0436400 Rorug04G0436400 Rorug04G0436500
rosa_samantha	Rh2BG460800 Rh2DG470100 Rh3AG177700 Rh3BG203600 Rh3CG194000 Rh3CG201100 Rh3DG171500 Rh5AG064800 Rh5AG064900 Rh5AG065200 Rh5BG061900 Rh5BG062100 Rh5BG062300 Rh5BG062400 Rh5BG062500 Rh5CG072000 Rh5CG072200 Rh5CG072300 Rh5CG072400 Rh5CG072600 Rh5CG072800 Rh5DG063500 Rh5DG063700 Rh5DG063900
rosa_wichuraiana	Rw2G036640 Rw3G016380 Rw5G005580 Rw5G005590 Rw5G005600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	69
AarI	CACCTGC	1 cut(s)	1612
AasI	GACNNNNNNGTC	1 cut(s)	1673
Acc36I	ACCTGC	1 cut(s)	1612
AccB1I	GGYRCC	1 cut(s)	97
AccB7I	CCANNNNNTGG	1 cut(s)	1626
AccI	GTMKAC	3 cut(s)	1440, 1611, 2510
AciI	CCGC	9 cut(s)	116, 152, 555, 881, 1240, 2179, 2270, 2534, 2561
AclWI	GGATC	7 cut(s)	749, 991, 1778, 1791, 1973, 2335, 2600
AcoI	YGGCCR	2 cut(s)	153, 1237
AcsI	RAATTY	6 cut(s)	466, 577, 1106, 1145, 1232, 2371
AcuI	CTGAAG	2 cut(s)	1553, 1887
AcyI	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
AfeI	AGCGCT	1 cut(s)	1843
AflII	CTTAAG	3 cut(s)	668, 1195, 1283
AflIII	ACRYGT	1 cut(s)	2684
AleI	CACNNNNGTG	1 cut(s)	2625
AloI	GAACNNNNNNTCC	2 cut(s)	349, 381
Alw21I	GWGCWC	2 cut(s)	1531, 2088
Alw26I	GTCTC	3 cut(s)	521, 673, 2230
Alw44I	GTGCAC	1 cut(s)	2084
AlwI	GGATC	7 cut(s)	749, 991, 1778, 1791, 1973, 2335, 2600
AlwNI	CAGNNNCTG	2 cut(s)	869, 1976
Ama87I	CYCGRG	1 cut(s)	2489
Aor51HI	AGCGCT	1 cut(s)	1843
AoxI	GGCC	7 cut(s)	153, 270, 803, 1237, 1328, 2195, 2318
ApaLI	GTGCAC	1 cut(s)	2084
ApeKI	GCWGC	3 cut(s)	1736, 2131, 2500
ApoI	RAATTY	6 cut(s)	466, 577, 1106, 1145, 1232, 2371
ArsI	GACNNNNNNTTYG	2 cut(s)	452, 484
AseI	ATTAAT	1 cut(s)	1464
AspLEI	GCGC	5 cut(s)	1651, 1661, 1757, 1844, 1923
AspS9I	GGNCC	4 cut(s)	143, 557, 1328, 1571
AsuC2I	CCSGG	1 cut(s)	2345
AsuHPI	GGTGA	6 cut(s)	184, 232, 445, 596, 719, 2366
AsuII	TTCGAA	1 cut(s)	2074
AsuNHI	GCTAGC	1 cut(s)	2251
AvaI	CYCGRG	1 cut(s)	2489
AvaII	GGWCC	3 cut(s)	143, 557, 1571
BaeGI	GKGCMC	1 cut(s)	2088
BamHI	GGATCC	1 cut(s)	1783
BanI	GGYRCC	1 cut(s)	97
BanII	GRGCYC	1 cut(s)	1531
BbsI	GAAGAC	2 cut(s)	616, 2022
Bbv12I	GWGCWC	2 cut(s)	1531, 2088
BbvCI	CCTCAGC	1 cut(s)	2234
BbvI	GCAGC	3 cut(s)	1748, 2118, 2512
BccI	CCATC	7 cut(s)	656, 704, 1469, 1547, 1841, 1938, 2162
BceAI	ACGGC	2 cut(s)	129, 1708
BciVI	GTATCC	1 cut(s)	1037
BclI	TGATCA	1 cut(s)	1836
BcnI	CCSGG	1 cut(s)	2345
BcoDI	GTCTC	3 cut(s)	521, 673, 2230
BfaI	CTAG	5 cut(s)	801, 1718, 1805, 2222, 2252
BfmI	CTRYAG	3 cut(s)	861, 1066, 1944
BfoI	RGCGCY	2 cut(s)	1845, 1924
BfrI	CTTAAG	3 cut(s)	668, 1195, 1283
BfuAI	ACCTGC	1 cut(s)	1612
BfuI	GTATCC	1 cut(s)	1037
BglII	AGATCT	2 cut(s)	1191, 1948
BisI	GCNGC	6 cut(s)	153, 1240, 1737, 2132, 2271, 2501
BlsI	GCNGC	6 cut(s)	154, 1241, 1738, 2133, 2272, 2502
Bme18I	GGWCC	3 cut(s)	143, 557, 1571
BmeT110I	CYCGRG	1 cut(s)	2489
BmgT120I	GGNCC	4 cut(s)	143, 557, 1328, 1571
BmiI	GGNNCC	4 cut(s)	99, 144, 366, 1785
BmrI	ACTGGG	2 cut(s)	2077, 2155
BmsI	GCATC	5 cut(s)	1303, 1626, 2264, 2515, 2521
BmtI	GCTAGC	1 cut(s)	2255
BmuI	ACTGGG	2 cut(s)	2077, 2155
BpiI	GAAGAC	2 cut(s)	616, 2022
BpmI	CTGGAG	3 cut(s)	545, 1545, 1857
Bpu10I	CCTNAGC	2 cut(s)	1644, 2234
Bpu14I	TTCGAA	1 cut(s)	2074
BpuEI	CTTGAG	2 cut(s)	404, 959
BpuMI	CCSGG	1 cut(s)	2345
BsaAI	YACGTR	2 cut(s)	1703, 2083
BsaBI	GATNNNNATC	1 cut(s)	2610
BsaHI	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
BsaI	GGTCTC	1 cut(s)	521
BsaWI	WCCGGW	1 cut(s)	1297
BsaXI	ACNNNNNCTCC	8 cut(s)	349, 379, 2292, 2322, 2587, 2617, 2622, 2652
Bse118I	RCCGGY	1 cut(s)	1670
Bse1I	ACTGG	6 cut(s)	853, 1528, 1631, 1824, 2072, 2150
Bse3DI	GCAATG	1 cut(s)	1764
Bse8I	GATNNNNATC	1 cut(s)	2610
BseGI	GGATG	7 cut(s)	1108, 1408, 1480, 1635, 1641, 2482, 2530
BseJI	GATNNNNATC	1 cut(s)	2610
BseMI	GCAATG	1 cut(s)	1764
BseMII	CTCAG	6 cut(s)	189, 438, 668, 692, 2248, 2418
BseNI	ACTGG	6 cut(s)	853, 1528, 1631, 1824, 2072, 2150
BseRI	GAGGAG	2 cut(s)	1073, 2495
BseSI	GKGCMC	1 cut(s)	2088
BseX3I	CGGCCG	1 cut(s)	1237
BseXI	GCAGC	3 cut(s)	1748, 2118, 2512
Bsh1285I	CGRYCG	1 cut(s)	1240
BshFI	GGCC	7 cut(s)	155, 272, 805, 1239, 1330, 2197, 2320
BshNI	GGYRCC	1 cut(s)	97
BsiEI	CGRYCG	1 cut(s)	1240
BsiHKAI	GWGCWC	2 cut(s)	1531, 2088
BsiHKCI	CYCGRG	1 cut(s)	2489
BsiSI	CCGG	4 cut(s)	1298, 1671, 2345, 2474
BslFI	GGGAC	2 cut(s)	461, 2294
BsmAI	GTCTC	3 cut(s)	521, 673, 2230
BsmFI	GGGAC	2 cut(s)	461, 2294
BsmI	GAATGC	1 cut(s)	1272
BsnI	GGCC	7 cut(s)	155, 272, 805, 1239, 1330, 2197, 2320
Bso31I	GGTCTC	1 cut(s)	521
BsoBI	CYCGRG	1 cut(s)	2489
Bsp119I	TTCGAA	1 cut(s)	2074
Bsp1286I	GDGCHC	2 cut(s)	1531, 2088
Bsp1407I	TGTACA	2 cut(s)	1416, 1954
Bsp19I	CCATGG	2 cut(s)	1887, 1993
BspACI	CCGC	9 cut(s)	116, 152, 555, 881, 1240, 2179, 2270, 2534, 2561
BspANI	GGCC	7 cut(s)	155, 272, 805, 1239, 1330, 2197, 2320
BspCNI	CTCAG	6 cut(s)	190, 439, 669, 693, 2247, 2417
BspLI	GGNNCC	4 cut(s)	99, 144, 366, 1785
BspMAI	CTGCAG	1 cut(s)	1948
BspMI	ACCTGC	1 cut(s)	1612
BspOI	GCTAGC	1 cut(s)	2255
BspPI	GGATC	7 cut(s)	749, 991, 1778, 1791, 1973, 2335, 2600
BspT104I	TTCGAA	1 cut(s)	2074
BspT107I	GGYRCC	1 cut(s)	97
BspTI	CTTAAG	3 cut(s)	668, 1195, 1283
BspTNI	GGTCTC	1 cut(s)	521
BsrDI	GCAATG	1 cut(s)	1764
BsrFI	RCCGGY	1 cut(s)	1670
BsrGI	TGTACA	2 cut(s)	1416, 1954
BsrI	ACTGG	6 cut(s)	853, 1528, 1631, 1824, 2072, 2150
BssAI	RCCGGY	1 cut(s)	1670
BssNAI	GTATAC	1 cut(s)	1441
BssNI	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
BssT1I	CCWWGG	2 cut(s)	1887, 1993
Bst1107I	GTATAC	1 cut(s)	1441
Bst4CI	ACNGT	8 cut(s)	238, 493, 1070, 1387, 1749, 2205, 2289, 2508
Bst6I	CTCTTC	2 cut(s)	933, 2343
BstACI	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
BstAFI	CTTAAG	3 cut(s)	668, 1195, 1283
BstAUI	TGTACA	2 cut(s)	1416, 1954
BstBAI	YACGTR	2 cut(s)	1703, 2083
BstBI	TTCGAA	1 cut(s)	2074
BstC8I	GCNNGC	7 cut(s)	553, 879, 1641, 1672, 1825, 2136, 2253
BstDEI	CTNAG	8 cut(s)	198, 447, 594, 677, 701, 1644, 2234, 2404
BstDSI	CCRYGG	3 cut(s)	1039, 1887, 1993
BstEII	GGTNACC	1 cut(s)	2354
BstENI	CCTNNNNNAGG	1 cut(s)	2298
BstF5I	GGATG	7 cut(s)	1108, 1408, 1480, 1635, 1641, 2482, 2530
BstH2I	RGCGCY	2 cut(s)	1845, 1924
BstHHI	GCGC	5 cut(s)	1651, 1661, 1757, 1844, 1923
BstMAI	GTCTC	3 cut(s)	521, 673, 2230
BstMCI	CGRYCG	1 cut(s)	1240
BstMWI	GCNNNNNNNGC	7 cut(s)	852, 1126, 1613, 1667, 1839, 2267, 2540
BstNSI	RCATGY	3 cut(s)	1655, 2270, 2688
BstPI	GGTNACC	1 cut(s)	2354
BstSFI	CTRYAG	3 cut(s)	861, 1066, 1944
BstSLI	GKGCMC	1 cut(s)	2088
BstSNI	TACGTA	1 cut(s)	1703
BstV1I	GCAGC	3 cut(s)	1748, 2118, 2512
BstV2I	GAAGAC	2 cut(s)	616, 2022
BstX2I	RGATCY	4 cut(s)	741, 1191, 1783, 1948
BstXI	CCANNNNNNTGG	1 cut(s)	286
BstYI	RGATCY	4 cut(s)	741, 1191, 1783, 1948
BstZ17I	GTATAC	1 cut(s)	1441
BstZI	CGGCCG	1 cut(s)	1237
BsuI	GTATCC	1 cut(s)	1037
BsuRI	GGCC	7 cut(s)	155, 272, 805, 1239, 1330, 2197, 2320
BtgI	CCRYGG	3 cut(s)	1039, 1887, 1993
BtgZI	GCGATG	1 cut(s)	1525
BtsCI	GGATG	7 cut(s)	1108, 1408, 1480, 1635, 1641, 2482, 2530
BtsI	GCAGTG	5 cut(s)	385, 560, 721, 1977, 2038
BveI	ACCTGC	1 cut(s)	1612
Cac8I	GCNNGC	7 cut(s)	553, 879, 1641, 1672, 1825, 2136, 2253
CaiI	CAGNNNCTG	2 cut(s)	869, 1976
CfoI	GCGC	5 cut(s)	1651, 1661, 1757, 1844, 1923
Cfr10I	RCCGGY	1 cut(s)	1670
Cfr13I	GGNCC	4 cut(s)	143, 557, 1328, 1571
CseI	GACGC	6 cut(s)	463, 1066, 1622, 1663, 1676, 2407
CsiI	ACCWGGT	1 cut(s)	2189
DdeI	CTNAG	8 cut(s)	198, 447, 594, 677, 701, 1644, 2234, 2404
DrdI	GACNNNNNNGTC	1 cut(s)	1673
DseDI	GACNNNNNNGTC	1 cut(s)	1673
EaeI	YGGCCR	2 cut(s)	153, 1237
EagI	CGGCCG	1 cut(s)	1237
Eam1104I	CTCTTC	2 cut(s)	933, 2343
EarI	CTCTTC	2 cut(s)	933, 2343
EciI	GGCGGA	1 cut(s)	2168
Ecl136II	GAGCTC	1 cut(s)	1529
EclXI	CGGCCG	1 cut(s)	1237
Eco105I	TACGTA	1 cut(s)	1703
Eco130I	CCWWGG	2 cut(s)	1887, 1993
Eco147I	AGGCCT	1 cut(s)	805
Eco24I	GRGCYC	1 cut(s)	1531
Eco31I	GGTCTC	1 cut(s)	521
Eco47I	GGWCC	3 cut(s)	143, 557, 1571
Eco47III	AGCGCT	1 cut(s)	1843
Eco52I	CGGCCG	1 cut(s)	1237
Eco53kI	GAGCTC	1 cut(s)	1529
Eco57I	CTGAAG	2 cut(s)	1553, 1887
Eco88I	CYCGRG	1 cut(s)	2489
Eco91I	GGTNACC	1 cut(s)	2354
EcoICRI	GAGCTC	1 cut(s)	1529
EcoNI	CCTNNNNNAGG	1 cut(s)	2298
EcoO109I	RGGNCCY	1 cut(s)	143
EcoO65I	GGTNACC	1 cut(s)	2354
EcoRI	GAATTC	2 cut(s)	1106, 1232
EcoT14I	CCWWGG	2 cut(s)	1887, 1993
EcoT38I	GRGCYC	1 cut(s)	1531
ErhI	CCWWGG	2 cut(s)	1887, 1993
FaqI	GGGAC	2 cut(s)	461, 2294
FauNDI	CATATG	2 cut(s)	1489, 2026
FbaI	TGATCA	1 cut(s)	1836
FblI	GTMKAC	3 cut(s)	1440, 1611, 2510
Fnu4HI	GCNGC	6 cut(s)	153, 1240, 1737, 2132, 2271, 2501
FokI	GGATG	7 cut(s)	1115, 1415, 1487, 1642, 1648, 2489, 2537
FriOI	GRGCYC	1 cut(s)	1531
Fsp4HI	GCNGC	6 cut(s)	153, 1240, 1737, 2132, 2271, 2501
FspBI	CTAG	5 cut(s)	801, 1718, 1805, 2222, 2252
GlaI	GCGC	5 cut(s)	1650, 1660, 1756, 1843, 1922
GluI	GCNGC	6 cut(s)	153, 1240, 1737, 2132, 2271, 2501
GsuI	CTGGAG	3 cut(s)	545, 1545, 1857
HaeII	RGCGCY	2 cut(s)	1845, 1924
HaeIII	GGCC	7 cut(s)	155, 272, 805, 1239, 1330, 2197, 2320
HapII	CCGG	4 cut(s)	1298, 1671, 2345, 2474
HgaI	GACGC	6 cut(s)	463, 1066, 1622, 1663, 1676, 2407
HhaI	GCGC	5 cut(s)	1651, 1661, 1757, 1844, 1923
Hin1I	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
Hin6I	GCGC	5 cut(s)	1649, 1659, 1755, 1842, 1921
HinP1I	GCGC	5 cut(s)	1649, 1659, 1755, 1842, 1921
HincII	GTYRAC	1 cut(s)	1612
HindII	GTYRAC	1 cut(s)	1612
HindIII	AAGCTT	2 cut(s)	1118, 1775
HpaII	CCGG	4 cut(s)	1298, 1671, 2345, 2474
HphI	GGTGA	6 cut(s)	184, 232, 445, 596, 719, 2366
Hpy188III	TCNNGA	7 cut(s)	524, 779, 1454, 1472, 1513, 1581, 2062
Hpy99I	CGWCG	1 cut(s)	1616
HpyAV	CCTTC	9 cut(s)	111, 123, 377, 536, 1067, 1093, 1454, 1949, 2575
HpyCH4III	ACNGT	8 cut(s)	238, 493, 1070, 1387, 1749, 2205, 2289, 2508
HpyCH4IV	ACGT	4 cut(s)	1437, 1702, 2082, 2307
HpyF10VI	GCNNNNNNNGC	7 cut(s)	852, 1126, 1613, 1667, 1839, 2267, 2540
HpyF3I	CTNAG	8 cut(s)	198, 447, 594, 677, 701, 1644, 2234, 2404
HpySE526I	ACGT	4 cut(s)	1437, 1702, 2082, 2307
Hsp92I	GRCGYC	5 cut(s)	474, 1077, 1614, 1668, 1674
HspAI	GCGC	5 cut(s)	1649, 1659, 1755, 1842, 1921
KroI	GCCGGC	1 cut(s)	1670
KroNI	GCCGGC	1 cut(s)	1672
Ksp22I	TGATCA	1 cut(s)	1836
LmnI	GCTCC	5 cut(s)	328, 370, 482, 1526, 2630
Lsp1109I	GCAGC	3 cut(s)	1748, 2118, 2512
LweI	GCATC	5 cut(s)	1303, 1626, 2264, 2515, 2521
MabI	ACCWGGT	1 cut(s)	2189
MaeI	CTAG	5 cut(s)	801, 1718, 1805, 2222, 2252
MaeII	ACGT	4 cut(s)	1437, 1702, 2082, 2307
MaeIII	GTNAC	7 cut(s)	132, 232, 493, 2033, 2165, 2303, 2354
MflI	RGATCY	4 cut(s)	741, 1191, 1783, 1948
MhlI	GDGCHC	2 cut(s)	1531, 2088
MlyI	GAGTC	5 cut(s)	455, 950, 1346, 1868, 2159
MmeI	TCCRAC	3 cut(s)	1074, 2006, 2694
MreI	CGCCGGCG	1 cut(s)	1670
MroNI	GCCGGC	1 cut(s)	1670
MseI	TTAA	9 cut(s)	264, 669, 1196, 1260, 1268, 1284, 1464, 2277, 2616
MslI	CAYNNNNRTG	4 cut(s)	1007, 1970, 2444, 2625
MspA1I	CMGCKG	1 cut(s)	446
MspCI	CTTAAG	3 cut(s)	668, 1195, 1283
MspI	CCGG	4 cut(s)	1298, 1671, 2345, 2474
Mva1269I	GAATGC	1 cut(s)	1272
MwoI	GCNNNNNNNGC	7 cut(s)	852, 1126, 1613, 1667, 1839, 2267, 2540
NaeI	GCCGGC	1 cut(s)	1672
NciI	CCSGG	1 cut(s)	2345
NcoI	CCATGG	2 cut(s)	1887, 1993
NdeI	CATATG	2 cut(s)	1489, 2026
NgoMIV	GCCGGC	1 cut(s)	1670
NheI	GCTAGC	1 cut(s)	2251
NlaIV	GGNNCC	4 cut(s)	99, 144, 366, 1785
NmuCI	GTSAC	5 cut(s)	132, 232, 2033, 2165, 2354
NspI	RCATGY	3 cut(s)	1655, 2270, 2688
NspV	TTCGAA	1 cut(s)	2074
OliI	CACNNNNGTG	1 cut(s)	2625
PaqCI	CACCTGC	1 cut(s)	1612
PasI	CCCWGGG	2 cut(s)	608, 2675
PceI	AGGCCT	1 cut(s)	805
PciI	ACATGT	1 cut(s)	2684
PctI	GAATGC	1 cut(s)	1272
PdiI	GCCGGC	1 cut(s)	1672
PfeI	GAWTC	6 cut(s)	290, 586, 697, 789, 1369, 2102
PflFI	GACNNNGTC	1 cut(s)	2222
PflMI	CCANNNNNTGG	1 cut(s)	1626
PfoI	TCCNGGA	4 cut(s)	581, 1149, 2343, 2421
PkrI	GCNGC	6 cut(s)	154, 1241, 1738, 2133, 2272, 2502
PleI	GAGTC	5 cut(s)	455, 949, 1345, 1867, 2158
PpsI	GAGTC	5 cut(s)	455, 949, 1345, 1867, 2158
Ppu21I	YACGTR	2 cut(s)	1703, 2083
PpuMI	RGGWCCY	1 cut(s)	143
PscI	ACATGT	1 cut(s)	2684
PshBI	ATTAAT	1 cut(s)	1464
PsiI	TTATAA	1 cut(s)	69
Psp124BI	GAGCTC	1 cut(s)	1531
Psp5II	RGGWCCY	1 cut(s)	143
PspEI	GGTNACC	1 cut(s)	2354
PspN4I	GGNNCC	4 cut(s)	99, 144, 366, 1785
PspPI	GGNCC	4 cut(s)	143, 557, 1328, 1571
PspPPI	RGGWCCY	1 cut(s)	143
PsrI	GAACNNNNNNTAC	4 cut(s)	1347, 1379, 1400, 1432
PstI	CTGCAG	1 cut(s)	1948
PstNI	CAGNNNCTG	2 cut(s)	869, 1976
PsuI	RGATCY	4 cut(s)	741, 1191, 1783, 1948
PsyI	GACNNNGTC	1 cut(s)	2222
PvuII	CAGCTG	1 cut(s)	446
RseI	CAYNNNNRTG	4 cut(s)	1007, 1970, 2444, 2625
SacI	GAGCTC	1 cut(s)	1531
SalI	GTCGAC	1 cut(s)	1610
SaqAI	TTAA	9 cut(s)	264, 669, 1196, 1260, 1268, 1284, 1464, 2277, 2616
SatI	GCNGC	6 cut(s)	153, 1240, 1737, 2132, 2271, 2501
Sau96I	GGNCC	4 cut(s)	143, 557, 1328, 1571
SchI	GAGTC	5 cut(s)	455, 950, 1346, 1868, 2159
SduI	GDGCHC	2 cut(s)	1531, 2088
SexAI	ACCWGGT	1 cut(s)	2189
SfaNI	GCATC	5 cut(s)	1303, 1626, 2264, 2515, 2521
SfcI	CTRYAG	3 cut(s)	861, 1066, 1944
SfuI	TTCGAA	1 cut(s)	2074
SgrAI	CRCCGGYG	1 cut(s)	1670
SinI	GGWCC	3 cut(s)	143, 557, 1571
SmiMI	CAYNNNNRTG	4 cut(s)	1007, 1970, 2444, 2625
SmlI	CTYRAG	5 cut(s)	419, 668, 974, 1195, 1283
SmoI	CTYRAG	5 cut(s)	419, 668, 974, 1195, 1283
SnaBI	TACGTA	1 cut(s)	1703
SseBI	AGGCCT	1 cut(s)	805
SsiI	CCGC	9 cut(s)	116, 152, 555, 881, 1240, 2179, 2270, 2534, 2561
SspMI	CTAG	5 cut(s)	801, 1718, 1805, 2222, 2252
SstI	GAGCTC	1 cut(s)	1531
StuI	AGGCCT	1 cut(s)	805
StyI	CCWWGG	2 cut(s)	1887, 1993
TaaI	ACNGT	8 cut(s)	238, 493, 1070, 1387, 1749, 2205, 2289, 2508
TaiI	ACGT	4 cut(s)	1440, 1705, 2085, 2310
TaqI	TCGA	8 cut(s)	792, 1056, 1611, 1857, 2061, 2074, 2462, 2711
TatI	WGTACW	3 cut(s)	338, 1416, 1954
TauI	GCSGC	3 cut(s)	155, 1242, 2273
TfiI	GAWTC	6 cut(s)	290, 586, 697, 789, 1369, 2102
Tru1I	TTAA	9 cut(s)	264, 669, 1196, 1260, 1268, 1284, 1464, 2277, 2616
Tru9I	TTAA	9 cut(s)	264, 669, 1196, 1260, 1268, 1284, 1464, 2277, 2616
TseFI	GTSAC	5 cut(s)	132, 232, 2033, 2165, 2354
TseI	GCWGC	3 cut(s)	1736, 2131, 2500
Tsp45I	GTSAC	5 cut(s)	132, 232, 2033, 2165, 2354
TspDTI	ATGAA	6 cut(s)	48, 942, 951, 1119, 2199, 2365
TspGWI	ACGGA	3 cut(s)	1028, 1113, 2052
Tth111I	GACNNNGTC	1 cut(s)	2222
Van91I	CCANNNNNTGG	1 cut(s)	1626
Vha464I	CTTAAG	3 cut(s)	668, 1195, 1283
VneI	GTGCAC	1 cut(s)	2084
VpaK11BI	GGWCC	3 cut(s)	143, 557, 1571
VspI	ATTAAT	1 cut(s)	1464
XagI	CCTNNNNNAGG	1 cut(s)	2298
XapI	RAATTY	6 cut(s)	466, 577, 1106, 1145, 1232, 2371
XceI	RCATGY	3 cut(s)	1655, 2270, 2688
XcmI	CCANNNNNNNNNTGG	2 cut(s)	659, 2437
XmiI	GTMKAC	3 cut(s)	1440, 1611, 2510
XspI	CTAG	5 cut(s)	801, 1718, 1805, 2222, 2252

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.